Sed0004354 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTGGCTGCTAGAGGAGCAGCCAAGAAGAAAAAAGGAAAAAATGTCTGTGAAGAAGTCCTTCTCTCTATCGAAGGCCGACGAGGCCAAGCGTCCCGGGAAGCATGATGCTGCAAGAAAGCACAGGAGATCTTTCGATCGCTGCTTTTCAAACCCAGGGCCAACACTACCATTGGAAGAAGGGAAGTCTTTGAAAGAGATGGATCCAAAGAAGTTGAAGACTGGGATCCGGAAATGGGCAAAAGCCGTGGTGGCTTATGCCCGCCAAGTAAGCAATCGTTTCGGAAGCAGGCGTCGCTAATTGGACCGGATGATGCTCACATGGAATTCGACGACCATTAGAATAACTCTTATTATCTCTCCAACATGGGTATATTTTTTGTGAGAAGACGAAATCAAATTTGTTTCAATGGTGATACGTGCACGTTTTTTGGAGTCTTTGGTTGGGGG CCTTGGCTGCTAGAGGAGCAGCCAAGAAGAAAAAAGGAAAAAATGTCTGTGAAGAAGTCCTTCTCTCTATCGAAGGCCGACGAGGCCAAGCGTCCCGGGAAGCATGATGCTGCAAGAAAGCACAGGAGATCTTTCGATCGCTGCTTTTCAAACCCAGGGCCAACACTACCATTGGAAGAAGGGAAGTCTTTGAAAGAGATGGATCCAAAGAAGTTGAAGACTGGGATCCGGAAATGGGCAAAAGCCGTGGTGGCTTATGCCCGCCAAGTAAGCAATCGTTTCGGAAGCAGGCGTCGCTAATTGGACCGGATGATGCTCACATGGAATTCGACGACCATTAGAATAACTCTTATTATCTCTCCAACATGGGTATATTTTTTGTGAGAAGACGAAATCAAATTTGTTTCAATGGTGATACGTGCACGTTTTTTGGAGTCTTTGGTTGGGGG ATGTCTGTGAAGAAGTCCTTCTCTCTATCGAAGGCCGACGAGGCCAAGCGTCCCGGGAAGCATGATGCTGCAAGAAAGCACAGGAGATCTTTCGATCGCTGCTTTTCAAACCCAGGGCCAACACTACCATTGGAAGAAGGGAAGTCTTTGAAAGAGATGGATCCAAAGAAGTTGAAGACTGGGATCCGGAAATGGGCAAAAGCCGTGGTGGCTTATGCCCGCCAAGTAAGCAATCGTTTCGGAAGCAGGCGTCGCTAA MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR Homology
BLAST of Sed0004354 vs. NCBI nr
Match: KAG6575488.1 (hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129.4 bits (324), Expect = 1.5e-26 Identity = 68/84 (80.95%), Postives = 74/84 (88.10%), Query Frame = 0
BLAST of Sed0004354 vs. NCBI nr
Match: KAG6593505.1 (hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.2 bits (300), Expect = 8.8e-24 Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Sed0004354 vs. NCBI nr
Match: KAA0059447.1 (hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK03877.1 hypothetical protein E5676_scaffold347G00720 [Cucumis melo var. makuwa]) HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23 Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Sed0004354 vs. NCBI nr
Match: KGN45542.1 (hypothetical protein Csa_016865 [Cucumis sativus]) HSP 1 Score: 118.6 bits (296), Expect = 2.6e-23 Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Sed0004354 vs. NCBI nr
Match: KEH18277.1 (hypothetical protein MTR_8g015560 [Medicago truncatula] >RHN39221.1 hypothetical protein MtrunA17_Chr8g0341501 [Medicago truncatula]) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-11 Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of Sed0004354 vs. ExPASy TrEMBL
Match: A0A5A7UXU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00720 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.3e-24 Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Sed0004354 vs. ExPASy TrEMBL
Match: A0A0A0KB03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23 Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Sed0004354 vs. ExPASy TrEMBL
Match: A0A072TLH5 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_8g015560 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.4e-12 Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of Sed0004354 vs. ExPASy TrEMBL
Match: A0A498IZM5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11 Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of Sed0004354 vs. ExPASy TrEMBL
Match: A0A067L8J0 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24809 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11 Identity = 50/86 (58.14%), Postives = 59/86 (68.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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