Sed0004172 (gene) Chayote v1

Overview
NameSed0004172
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSnoaL-like domain-containing protein
LocationLG05: 5919923 .. 5921964 (-)
RNA-Seq ExpressionSed0004172
SyntenySed0004172
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCCATTTCCCCTTCTGTTGTACTGAATCAACAATAATGGTCTTTACAATAAGTGCTCCTCAAGCTGTCAACTTGAGATCCAAATCTTTGACAAAACTTTCCCATACATCCTTGCCTAAAAGAACCTCATGTTTATTTCAACAAAAGACCAGAGAACTAAGATATGGTGTCTGGAACAATAGGAAAGCAAACTACAGATCATCCACCGACACAAAACTCCGTTTCGTGTCGTCGTGCCTGAAGGATGGTTCGGTTTCCGGATTGGATTCGAGTTCAAATCCTCCAACAGAAATGATTGTGAAGTTTTACAAATGCATCAATGAAAAAAGCTTGAAGGAATTGAGCAGTTACATCTCAGAAGATTGCCTCATTGAGGACTCTTTGTTCATTGAACCATTCATAGGGAAGAAGGTAAGAATGAGCTATTAGATATTCTGTATTACTGTTCTCATTCGTATGAATGTAACCATGGAACCTACCATCAGGCAGCTCTGAAGTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTTAAGTTTAGAATTAGTACCGTCTACGAAAGAGGCGCTACCGGGGCAGGAGCAATCTGGCATTTAGGTAGTTCTATCTATCAGCATCCCTCCAATTCATATTGCATTTGGGAACCAATTGAGTTATTATAAACAAGGTTATTATAACAGGTGAGGTTATAATAACATGTGTTTGAGATACAGGTTATTATAATATGAGTTATGATAACCTATATTTGAAGTACATGTTATTATAACACAAGATTAATATAACGGCTAATCCACCGATTACTATTATCGGTGTTCTAAATAGAAGTTTGCATGGGGTTGAGTTGAGTTAGATTGAGGGACATTTTTGGACCAACCCAAAATTTGGGTTGGTCACTTTTTCAACCCAAAATTTGGGTTGGTCACTTTTTCAACCCAACTCAACCTTATATTTTTGAGTTGAATTGAGTTGGGTCATCGTATTCATCGATACATGGAAAATATAAATATCATTTCATACACTATACATAAATAAAAGCAATCTCCCACCATTATCATATCAATGCAACAAAATGGATATAAATAATAAACAAGCAAAATATTTGATTAAAAGTCACTCACTATTAATCCTACCTTCATGATTCATATATAATATCCCAAGTTCCAAAACATGAATTGAGCTATTATAATCTTATCTAATCTAACTCACCCAAACACCCCTTCACTGACAAGCCTAATCTATCATTTGGCAGAGTGGAAGAACATGAAGATTCCCTTCACCAAGGGTTGCACTTTCATTGACATCAGAAATGAAGAAAGAAGAACAACAAGGTTAACAATAAATAAACACAGTACCTAACACTTAATTGTATTGCATAAAAATATGTTTTTACTGAGATGTTACTCTAATACAGAAAGGCACAAATTATAATTGAACCACAAGTCAAAGCAGGACATTTCATCTTGGTAAGCACACAAGCCATTTTCCCTATAGTTTCAACTCATTCAATTGAAATCAAGTAGAATATTTACTAAATTACCACTAAATCTTGAAACTTTGGTCTGATGGGGCTCTGTGTATACTTAATATCAGGCTGTAATGAAGCTTGTGACTTTATTGCTTGCCAAGTATCCAACAATTCCTGAATGTAAGTCAACTTGAATACCTTATGCCATAGACAATTATAAACAAAAGCTTCATATTACACATTGAAGATACATGAACATGTCTTGCAGGGGTGATTAAAGTTTCTCAACAACGTTGGGTAAAGGGGATATCAAAGATCTGTATAATTCTCTTCAAGCTCATCTTGGACAGCTTTTTGAAGAGCTATCTAGCCTGTATACATTTCGGAGCTCAACTGTATATTATTGTACTCAAATTTTTACATTTTATTTTAGAGTATTTCAAGTAAAGGATACATCATTATATCTTAACTGCACAAACATCCATTCACTTCATGACATGGAATAAATAAAACTCGCTAACTTGCCGGGAAGTATCTCGTACATCCTTCCCACCATTTGTTTGTATAATAATG

mRNA sequence

TACCCATTTCCCCTTCTGTTGTACTGAATCAACAATAATGGTCTTTACAATAAGTGCTCCTCAAGCTGTCAACTTGAGATCCAAATCTTTGACAAAACTTTCCCATACATCCTTGCCTAAAAGAACCTCATGTTTATTTCAACAAAAGACCAGAGAACTAAGATATGGTGTCTGGAACAATAGGAAAGCAAACTACAGATCATCCACCGACACAAAACTCCGTTTCGTGTCGTCGTGCCTGAAGGATGGTTCGGTTTCCGGATTGGATTCGAGTTCAAATCCTCCAACAGAAATGATTGTGAAGTTTTACAAATGCATCAATGAAAAAAGCTTGAAGGAATTGAGCAGTTACATCTCAGAAGATTGCCTCATTGAGGACTCTTTGTTCATTGAACCATTCATAGGGAAGAAGGCAGCTCTGAAGTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTTAAGTTTAGAATTAGTACCGTCTACGAAAGAGGCGCTACCGGGGCAGGAGCAATCTGGCATTTAGAGTGGAAGAACATGAAGATTCCCTTCACCAAGGGTTGCACTTTCATTGACATCAGAAATGAAGAAAGAAGAACAACAAGAAAGGCACAAATTATAATTGAACCACAAGTCAAAGCAGGACATTTCATCTTGGCTGTAATGAAGCTTGTGACTTTATTGCTTGCCAAGTATCCAACAATTCCTGAATGGGTGATTAAAGTTTCTCAACAACGTTGGGTAAAGGGGATATCAAAGATCTGTATAATTCTCTTCAAGCTCATCTTGGACAGCTTTTTGAAGAGCTATCTAGCCTGTATACATTTCGGAGCTCAACTGTATATTATTGTACTCAAATTTTTACATTTTATTTTAGAGTATTTCAAGTAAAGGATACATCATTATATCTTAACTGCACAAACATCCATTCACTTCATGACATGGAATAAATAAAACTCGCTAACTTGCCGGGAAGTATCTCGTACATCCTTCCCACCATTTGTTTGTATAATAATG

Coding sequence (CDS)

ATGGTCTTTACAATAAGTGCTCCTCAAGCTGTCAACTTGAGATCCAAATCTTTGACAAAACTTTCCCATACATCCTTGCCTAAAAGAACCTCATGTTTATTTCAACAAAAGACCAGAGAACTAAGATATGGTGTCTGGAACAATAGGAAAGCAAACTACAGATCATCCACCGACACAAAACTCCGTTTCGTGTCGTCGTGCCTGAAGGATGGTTCGGTTTCCGGATTGGATTCGAGTTCAAATCCTCCAACAGAAATGATTGTGAAGTTTTACAAATGCATCAATGAAAAAAGCTTGAAGGAATTGAGCAGTTACATCTCAGAAGATTGCCTCATTGAGGACTCTTTGTTCATTGAACCATTCATAGGGAAGAAGGCAGCTCTGAAGTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTTAAGTTTAGAATTAGTACCGTCTACGAAAGAGGCGCTACCGGGGCAGGAGCAATCTGGCATTTAGAGTGGAAGAACATGAAGATTCCCTTCACCAAGGGTTGCACTTTCATTGACATCAGAAATGAAGAAAGAAGAACAACAAGAAAGGCACAAATTATAATTGAACCACAAGTCAAAGCAGGACATTTCATCTTGGCTGTAATGAAGCTTGTGACTTTATTGCTTGCCAAGTATCCAACAATTCCTGAATGGGTGATTAAAGTTTCTCAACAACGTTGGGTAAAGGGGATATCAAAGATCTGTATAATTCTCTTCAAGCTCATCTTGGACAGCTTTTTGAAGAGCTATCTAGCCTGTATACATTTCGGAGCTCAACTGTATATTATTGTACTCAAATTTTTACATTTTATTTTAGAGTATTTCAAGTAA

Protein sequence

MVFTISAPQAVNLRSKSLTKLSHTSLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDTKLRFVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPFIGKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDIRNEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISKICIILFKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYFK
Homology
BLAST of Sed0004172 vs. NCBI nr
Match: XP_038906943.1 (uncharacterized protein LOC120092809 [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-108
Identity = 208/285 (72.98%), Postives = 236/285 (82.81%), Query Frame = 0

Query: 1   MVFTISAPQAVNL-RSKSLTKLSHTSLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDT 60
           ++ +   PQAVNL  S+SL + S T L KR+SC+ QQK     YG    +K N R STD 
Sbjct: 3   LIISPPPPQAVNLGGSQSLRRFSCTFLTKRSSCILQQKK---NYGNCKKKKTNNRLSTDV 62

Query: 61  KLRFVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIE 120
           KL FVSSCLKD S S LDS SN P+EMI +FYKCINEK+LKELSSYISEDC IEDSLF+E
Sbjct: 63  KLHFVSSCLKDDSFSRLDSRSNSPSEMIERFYKCINEKNLKELSSYISEDCHIEDSLFVE 122

Query: 121 PFIGKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFI 180
           PFIGKKAAL+FFEELT SMGPDVKFRI  +YER  +  GAIWHLEWKNM+IPFTKGCTFI
Sbjct: 123 PFIGKKAALRFFEELTHSMGPDVKFRIHNIYERRVSSVGAIWHLEWKNMEIPFTKGCTFI 182

Query: 181 DIRNEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGI 240
           DIRNEER+T +KAQIIIEPQ+KAGH ILA+MKLVTLLLAKYP IPEW+IKVSQQRWVK +
Sbjct: 183 DIRNEERKTIQKAQIIIEPQIKAGHLILAIMKLVTLLLAKYPAIPEWLIKVSQQRWVKWM 242

Query: 241 SKICIILFKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYFK 285
           SKICIILFKL+LDSFLKSYL  IHFGA+LY  VLKFLH++++ FK
Sbjct: 243 SKICIILFKLLLDSFLKSYLTFIHFGAELYSNVLKFLHYVIKSFK 284

BLAST of Sed0004172 vs. NCBI nr
Match: XP_008437322.1 (PREDICTED: uncharacterized protein LOC103482777 isoform X1 [Cucumis melo])

HSP 1 Score: 337.8 bits (865), Expect = 9.0e-89
Identity = 184/282 (65.25%), Postives = 214/282 (75.89%), Query Frame = 0

Query: 5   ISAPQAVNL-RSKSLTKLSHT-SLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDTKLR 64
           I++PQAVN   S S  + S+T  L KRTSC+FQQK     YG +N RK N        +R
Sbjct: 4   ITSPQAVNFGGSPSFRRFSYTLFLNKRTSCIFQQKK---NYGNYNKRKTN--------VR 63

Query: 65  FVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPFI 124
            VSSCL D S S   SSSN P EMI  FYKCINEK+LK++++YISEDCLIEDSLFIE F 
Sbjct: 64  LVSSCLMDDSFSYSSSSSNSPGEMIEMFYKCINEKNLKKMNTYISEDCLIEDSLFIEKFK 123

Query: 125 GKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDIR 184
           GKKAA+ F E+LT+SMGPDVKFRI TVYER  + AGAIWHLEW+NM+IP TKGCTFIDIR
Sbjct: 124 GKKAAMSFIEKLTESMGPDVKFRIRTVYERRPSMAGAIWHLEWRNMEIPLTKGCTFIDIR 183

Query: 185 NEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISKI 244
           +EER+T +  QII E Q+KAGH  LA+MKLVTLLLAK+P I EW+ KVSQQRWVK ISKI
Sbjct: 184 DEERKTIQMVQIITESQLKAGHLFLAIMKLVTLLLAKHPAILEWLTKVSQQRWVKRISKI 243

Query: 245 CIILFKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYFK 285
           CI LFK +LD+FLKSYL  IH G QLY  VL FL +++E FK
Sbjct: 244 CIFLFKHLLDNFLKSYLTFIHLGTQLYSHVLNFLCYVIECFK 274

BLAST of Sed0004172 vs. NCBI nr
Match: XP_022970084.1 (uncharacterized protein LOC111469081 [Cucurbita maxima])

HSP 1 Score: 337.4 bits (864), Expect = 1.2e-88
Identity = 174/282 (61.70%), Postives = 212/282 (75.18%), Query Frame = 0

Query: 2   VFTISAPQAVNLRSKSLTKLSHTSLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDTKL 61
           + T   PQA+ L S+     ++TS+PK+ S LFQQK           RK +Y   TD K 
Sbjct: 3   LITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQK---------KLRKTSYTLVTDVKP 62

Query: 62  RFVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPF 121
           RFV SCLKDGSV  LDS SN P+EM+ KFY+CINEK LKELSSYISEDCLIEDSLF E F
Sbjct: 63  RFVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAF 122

Query: 122 IGKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDI 181
           IGK+AALKFF+ELTQSMGPDVKFR   VYE G + AGA WHL WKN KIPFTKGCTFIDI
Sbjct: 123 IGKEAALKFFKELTQSMGPDVKFRFRNVYESGTSRAGATWHLVWKNTKIPFTKGCTFIDI 182

Query: 182 RNEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISK 241
            NEE RT +KAQII+EPQVKAGH IL +MKLVT LLA+YP I +WV+K+SQQRWV+ ++K
Sbjct: 183 NNEE-RTIQKAQIIMEPQVKAGHLILGMMKLVTSLLAQYPAIHKWVMKLSQQRWVRWLAK 242

Query: 242 ICIILFKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYF 284
           IC++L+K  L S ++SYL  IH G+ +++  +K L +++ +F
Sbjct: 243 ICVVLYKFFLHSLMRSYLTFIHCGSLMFVFTVKLLRWVIGFF 274

BLAST of Sed0004172 vs. NCBI nr
Match: XP_011654728.2 (uncharacterized protein LOC101214565 [Cucumis sativus] >KAE8647850.1 hypothetical protein Csa_000137 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 2.6e-88
Identity = 184/281 (65.48%), Postives = 214/281 (76.16%), Query Frame = 0

Query: 5   ISAPQAVNL-RSKSLTKL-SHTSLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDTKLR 64
           I++PQAVN   S+S  +  S+T L KRTSC+FQQK     YG +N RK N          
Sbjct: 4   ITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKK---NYGNYNKRKTNN--------T 63

Query: 65  FVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPFI 124
            V SCL D S S   SSSN P EMI +FYKCINEK+LKE+S+YISEDCLIEDSLFIE F 
Sbjct: 64  LVLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFK 123

Query: 125 GKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDIR 184
           GKKAA+ F E+LT+SMGPDVKFRI  VYER  + AGAIWHLEW+NM+IP TKGCTFIDIR
Sbjct: 124 GKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIR 183

Query: 185 NEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISKI 244
           +EER+T +K QII EPQ KAGH IL +MKLVTLLLAK   I EW+IK SQQRWVK +SKI
Sbjct: 184 DEERKTIQKIQIINEPQFKAGHLILDIMKLVTLLLAKNSAILEWLIKASQQRWVKWMSKI 243

Query: 245 CIILFKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYF 284
           C+ LF L+LDSF KSYL  IHFGAQLY  VLKFL++I+++F
Sbjct: 244 CVTLFNLLLDSFSKSYLTFIHFGAQLYSCVLKFLYYIVDFF 273

BLAST of Sed0004172 vs. NCBI nr
Match: XP_022929026.1 (uncharacterized protein LOC111435747 [Cucurbita moschata])

HSP 1 Score: 331.6 bits (849), Expect = 6.5e-87
Identity = 173/282 (61.35%), Postives = 209/282 (74.11%), Query Frame = 0

Query: 2   VFTISAPQAVNLRSKSLTKLSHTSLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDTKL 61
           + T   PQA+ L S+     ++TS+PKR S LFQQK           RK +Y  +TD K 
Sbjct: 3   LITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQK---------KLRKTSYTLATDVKP 62

Query: 62  RFVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPF 121
           RFVSSCLKDGSV  LDS SN P+EM+ K Y+CINEK LKELSSY+SEDCLIEDSLF E F
Sbjct: 63  RFVSSCLKDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAF 122

Query: 122 IGKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDI 181
           IGK+AALKFF+ELTQSMGPDVKFR   VYE GA+ AG  WHL WKN KIPFTKGCTFI I
Sbjct: 123 IGKEAALKFFKELTQSMGPDVKFRFRNVYESGASRAGVTWHLVWKNTKIPFTKGCTFIHI 182

Query: 182 RNEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISK 241
            NE+ RT +KAQIIIEPQVKAGH IL +MKLVT LLA+YP I +WV+K+SQQRWV+ ++K
Sbjct: 183 NNEQ-RTIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQYPAIHKWVMKLSQQRWVRWVAK 242

Query: 242 ICIILFKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYF 284
           IC++L+   L S L+SYL  IH  + +++  LK L ++  +F
Sbjct: 243 ICVLLYNFFLHSLLRSYLTFIHCASLMFVFTLKLLRWVKGFF 274

BLAST of Sed0004172 vs. ExPASy TrEMBL
Match: A0A1S3ATV9 (uncharacterized protein LOC103482777 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482777 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 4.4e-89
Identity = 184/282 (65.25%), Postives = 214/282 (75.89%), Query Frame = 0

Query: 5   ISAPQAVNL-RSKSLTKLSHT-SLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDTKLR 64
           I++PQAVN   S S  + S+T  L KRTSC+FQQK     YG +N RK N        +R
Sbjct: 4   ITSPQAVNFGGSPSFRRFSYTLFLNKRTSCIFQQKK---NYGNYNKRKTN--------VR 63

Query: 65  FVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPFI 124
            VSSCL D S S   SSSN P EMI  FYKCINEK+LK++++YISEDCLIEDSLFIE F 
Sbjct: 64  LVSSCLMDDSFSYSSSSSNSPGEMIEMFYKCINEKNLKKMNTYISEDCLIEDSLFIEKFK 123

Query: 125 GKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDIR 184
           GKKAA+ F E+LT+SMGPDVKFRI TVYER  + AGAIWHLEW+NM+IP TKGCTFIDIR
Sbjct: 124 GKKAAMSFIEKLTESMGPDVKFRIRTVYERRPSMAGAIWHLEWRNMEIPLTKGCTFIDIR 183

Query: 185 NEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISKI 244
           +EER+T +  QII E Q+KAGH  LA+MKLVTLLLAK+P I EW+ KVSQQRWVK ISKI
Sbjct: 184 DEERKTIQMVQIITESQLKAGHLFLAIMKLVTLLLAKHPAILEWLTKVSQQRWVKRISKI 243

Query: 245 CIILFKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYFK 285
           CI LFK +LD+FLKSYL  IH G QLY  VL FL +++E FK
Sbjct: 244 CIFLFKHLLDNFLKSYLTFIHLGTQLYSHVLNFLCYVIECFK 274

BLAST of Sed0004172 vs. ExPASy TrEMBL
Match: A0A6J1I4H1 (uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 5.7e-89
Identity = 174/282 (61.70%), Postives = 212/282 (75.18%), Query Frame = 0

Query: 2   VFTISAPQAVNLRSKSLTKLSHTSLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDTKL 61
           + T   PQA+ L S+     ++TS+PK+ S LFQQK           RK +Y   TD K 
Sbjct: 3   LITSPPPQALTLGSQPFRTFAYTSIPKKPSSLFQQK---------KLRKTSYTLVTDVKP 62

Query: 62  RFVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPF 121
           RFV SCLKDGSV  LDS SN P+EM+ KFY+CINEK LKELSSYISEDCLIEDSLF E F
Sbjct: 63  RFVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAF 122

Query: 122 IGKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDI 181
           IGK+AALKFF+ELTQSMGPDVKFR   VYE G + AGA WHL WKN KIPFTKGCTFIDI
Sbjct: 123 IGKEAALKFFKELTQSMGPDVKFRFRNVYESGTSRAGATWHLVWKNTKIPFTKGCTFIDI 182

Query: 182 RNEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISK 241
            NEE RT +KAQII+EPQVKAGH IL +MKLVT LLA+YP I +WV+K+SQQRWV+ ++K
Sbjct: 183 NNEE-RTIQKAQIIMEPQVKAGHLILGMMKLVTSLLAQYPAIHKWVMKLSQQRWVRWLAK 242

Query: 242 ICIILFKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYF 284
           IC++L+K  L S ++SYL  IH G+ +++  +K L +++ +F
Sbjct: 243 ICVVLYKFFLHSLMRSYLTFIHCGSLMFVFTVKLLRWVIGFF 274

BLAST of Sed0004172 vs. ExPASy TrEMBL
Match: A0A6J1ELY0 (uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC111435747 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 3.1e-87
Identity = 173/282 (61.35%), Postives = 209/282 (74.11%), Query Frame = 0

Query: 2   VFTISAPQAVNLRSKSLTKLSHTSLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDTKL 61
           + T   PQA+ L S+     ++TS+PKR S LFQQK           RK +Y  +TD K 
Sbjct: 3   LITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQK---------KLRKTSYTLATDVKP 62

Query: 62  RFVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPF 121
           RFVSSCLKDGSV  LDS SN P+EM+ K Y+CINEK LKELSSY+SEDCLIEDSLF E F
Sbjct: 63  RFVSSCLKDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAF 122

Query: 122 IGKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDI 181
           IGK+AALKFF+ELTQSMGPDVKFR   VYE GA+ AG  WHL WKN KIPFTKGCTFI I
Sbjct: 123 IGKEAALKFFKELTQSMGPDVKFRFRNVYESGASRAGVTWHLVWKNTKIPFTKGCTFIHI 182

Query: 182 RNEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISK 241
            NE+ RT +KAQIIIEPQVKAGH IL +MKLVT LLA+YP I +WV+K+SQQRWV+ ++K
Sbjct: 183 NNEQ-RTIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQYPAIHKWVMKLSQQRWVRWVAK 242

Query: 242 ICIILFKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYF 284
           IC++L+   L S L+SYL  IH  + +++  LK L ++  +F
Sbjct: 243 ICVLLYNFFLHSLLRSYLTFIHCASLMFVFTLKLLRWVKGFF 274

BLAST of Sed0004172 vs. ExPASy TrEMBL
Match: A0A6J1DVV2 (uncharacterized protein LOC111023569 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 9.1e-87
Identity = 175/280 (62.50%), Postives = 219/280 (78.21%), Query Frame = 0

Query: 5   ISAPQAVNLRSKSLTKLSHTSLPKRTSCLFQQ-KTRELRYGVWNNRKANYRSSTDTKLRF 64
           I +P  ++L S+S   L +T+LPK +SC+FQQ KT  L+YG W  RK N RSSTD KLRF
Sbjct: 4   IRSPPPISLGSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDW-MRKTNKRSSTDVKLRF 63

Query: 65  VSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPFIG 124
           V SCL D S S LDS+SNP +EMI  FY+CINEK+L+EL SYISEDC+IEDSLFIEPF G
Sbjct: 64  VPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPFQG 123

Query: 125 KKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDIRN 184
           +K AL+FFEELTQSMG  VKFRI  VYE G +GAGAIW L WK+++IPF+KGCTFI+IRN
Sbjct: 124 RKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRN 183

Query: 185 EERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISKIC 244
           E+RR  +KAQII+EPQVKAGHFILA++KLVT LL  +P IPEW++K+ Q  WVK +SKIC
Sbjct: 184 EKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPEWLLKLFQLPWVKWLSKIC 243

Query: 245 IILFKLILDSFLKSYLACIH-FGAQLYIIVLKFLHFILEY 283
           I LF L+ +SFL+S LA  + +  + +++ L FL +IL +
Sbjct: 244 IKLFTLLWESFLESLLAFKYLYNYRHWVLPLNFLRYILGF 282

BLAST of Sed0004172 vs. ExPASy TrEMBL
Match: A0A0A0KMI4 (SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152840 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.8e-85
Identity = 177/267 (66.29%), Postives = 202/267 (75.66%), Query Frame = 0

Query: 5   ISAPQAVNL-RSKSLTKL-SHTSLPKRTSCLFQQKTRELRYGVWNNRKANYRSSTDTKLR 64
           I++PQAVN   S+S  +  S+T L KRTSC+FQQK     YG +N RK N          
Sbjct: 4   ITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKK---NYGNYNKRKTNN--------T 63

Query: 65  FVSSCLKDGSVSGLDSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPFI 124
            V SCL D S S   SSSN P EMI +FYKCINEK+LKE+S+YISEDCLIEDSLFIE F 
Sbjct: 64  LVLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFK 123

Query: 125 GKKAALKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDIR 184
           GKKAA+ F E+LT+SMGPDVKFRI  VYER  + AGAIWHLEW+NM+IP TKGCTFIDIR
Sbjct: 124 GKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIR 183

Query: 185 NEERRTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISKI 244
           +EER+T +K QII EPQ KAGH IL +MKLVTLLLAK   I EW+IK SQQRWVK +SKI
Sbjct: 184 DEERKTIQKIQIINEPQFKAGHLILDIMKLVTLLLAKNSAILEWLIKASQQRWVKWMSKI 243

Query: 245 CIILFKLILDSFLKSYLACIHFGAQLY 270
           C+ LF L+LDSF KSYL  IHFGAQLY
Sbjct: 244 CVTLFNLLLDSFSKSYLTFIHFGAQLY 259

BLAST of Sed0004172 vs. TAIR 10
Match: AT5G41470.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 132.9 bits (333), Expect = 4.1e-31
Identity = 79/217 (36.41%), Postives = 125/217 (57.60%), Query Frame = 0

Query: 73  VSGLDSSSNPPTEM-----IVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPFIGKKAA 132
           VS LD  ++ P ++     ++KFY  INEK+  +LSS IS DC I+D  F +PF GK+ A
Sbjct: 60  VSCLDRPNSRPNQISGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEA 119

Query: 133 LKFFEELTQSMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDIRNE-ER 192
           ++FFEEL +SMG +VKF +  V E     A   WHLEWK  KIPFT+GC+F +  +E  R
Sbjct: 120 MEFFEELVKSMGQNVKFCVENVCEGDGHSAAVNWHLEWKGRKIPFTRGCSFYEFIDEGGR 179

Query: 193 RTTRKAQIIIEPQVKAGHFILAVMKLVTLLLAKYPTIPEWVIKVSQQRWVKGISKICIIL 252
              R A+I+IE  +K G   L+++K +T L  ++P   E  ++      ++   +I  + 
Sbjct: 180 LVIRNARILIESPIKPGGITLSLLKNITFLFDEFPKGAELFLE-KPYAIIQAAIRIYGLF 239

Query: 253 FKLILDSFLKSYLACIHFGAQLYIIVLKFLHFILEYF 284
              +++  + SYL  +   A+ +++V+K +  I   F
Sbjct: 240 LAPLINHVMASYLKLLSNMAEFFLLVVKIIIKIRNLF 275

BLAST of Sed0004172 vs. TAIR 10
Match: AT1G71480.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 109.0 bits (271), Expect = 6.3e-24
Identity = 50/150 (33.33%), Postives = 85/150 (56.67%), Query Frame = 0

Query: 77  DSSSNPPTEMIVKFYKCINEKSLKELSSYISEDCLIEDSLFIEPFIGKKAALKFFEELTQ 136
           +++    +E++  FY  +N   L  ++  I++DC+ ED +F  PF+G+KA L FF +  +
Sbjct: 65  ETAPTSASEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIE 124

Query: 137 SMGPDVKFRISTVYERGATGAGAIWHLEWKNMKIPFTKGCTFIDIR-NEERRTTRKAQII 196
           S   D++F I  +    ++  G  WHLEWK    PF+KGC+F  +   + +R     +  
Sbjct: 125 STSTDLQFVIDDISTEDSSAVGVSWHLEWKGKNFPFSKGCSFYRLEVIDGKRQIVYGRDC 184

Query: 197 IEPQVKAGHFILAVMKLVTLLLAKYPTIPE 226
           +EP +K G  +LA +K VT LL K+P + +
Sbjct: 185 VEPAIKPGETVLAAIKGVTWLLQKFPQLAD 214

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906943.12.3e-10872.98uncharacterized protein LOC120092809 [Benincasa hispida][more]
XP_008437322.19.0e-8965.25PREDICTED: uncharacterized protein LOC103482777 isoform X1 [Cucumis melo][more]
XP_022970084.11.2e-8861.70uncharacterized protein LOC111469081 [Cucurbita maxima][more]
XP_011654728.22.6e-8865.48uncharacterized protein LOC101214565 [Cucumis sativus] >KAE8647850.1 hypothetica... [more]
XP_022929026.16.5e-8761.35uncharacterized protein LOC111435747 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3ATV94.4e-8965.25uncharacterized protein LOC103482777 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1I4H15.7e-8961.70uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081... [more]
A0A6J1ELY03.1e-8761.35uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC1114357... [more]
A0A6J1DVV29.1e-8762.50uncharacterized protein LOC111023569 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A0A0KMI43.8e-8566.29SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152840 ... [more]
Match NameE-valueIdentityDescription
AT5G41470.14.1e-3136.41Nuclear transport factor 2 (NTF2) family protein [more]
AT1G71480.16.3e-2433.33Nuclear transport factor 2 (NTF2) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 74..190
e-value: 3.1E-9
score: 38.7
NoneNo IPR availablePANTHERPTHR33698:SF1NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEINcoord: 14..281
NoneNo IPR availablePANTHERPTHR33698NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEINcoord: 14..281
IPR037401SnoaL-like domainPFAMPF12680SnoaL_2coord: 89..183
e-value: 4.9E-6
score: 27.1
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 84..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0004172.1Sed0004172.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane