Sed0004116 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAAAAAATCTAACTCCTTTCCGGGTTTTCTTTCTTCTTCTCTCTTCAACACCAAAATCCAAACACCCCCGGTGTAAGTAGTACTAAAAGCAGGCGATTACATTCACCTGGCTATATATACCCTACGTGGACCCTGATTCAAAACCCTAACCCTCCATTTTTTTCTCAGAGGCAGCCGAAAGGTATGAAACTCTCTCTTCTCTCTTCATTATGATATTAATGGCGACCTGCTTCTTGTTTGCTAAAAGTGAGACTATGCTTCATCGATTTCCGTGTCTTTGTTTTGTTTTCTTGTTCTTTGGCTTTTCTGCTTCGTTGATCGTGTTTTCATCCTGAAACGAAGTGTTTAATGTCTGCACTGATGATCTAACATTACAGATTTCTCTGAAAATGGTGGTTTCTTGTAGTCGTGAGGTTTTAAGCAGGTTCTCACTCTCAGAATTGGATATTATATAATTAGAAATCGTTCTTTGAATCATTGTTTATGTACTTTATTTGTTAATTTAGTTATTTTTGTTGTATTCGATGTTTCGTTGTTGAGGAGAGAAGAAATGGATTGTGAAAATGACACTATTGATTTAGTAATGAATCTTGTTGGTGTTGCGATGTTATATTACATTAATGTTGTACATAGTGGAAGAAATGGTTGACAATCAGAAGTTCTAATTTGAAAAGATGATGATGGGAAGACAGGAATCAGTAGTAGCTGGAAATACTTTTGTCTCAAACTATATTATGAGGGACATTGCCTTCAAAACAAGTCTAATAGTTTACATTAAGAAAACCCAAGCAGCCATGGATTCAAAAAACGAAGTTTACACCAAAAGAAGGAAGACCTACAATTCTGCTAGGCTATGGAGTCAGCTTAGGTTCAGCCTCATAATACCAGACTATGAGTGTATTAGATTTAGATTTATACCCTCTGGTCACATTTGTTCCATAGCAAAGAAAAATTTGTCTAACTTTTTGGAGTTGGGAGGAGGAATAGTTAAGATTTGGAAAAGGGTCCTTTCTATGAAGTGAATTGTGAGTGACATAAGCTTGATCCTTAAGAGTATTATTGTTTGCACCATATGCATATACATGATGCAGGATAAGCTTGATCTGAGAGCTAGAAAGTTTATTCCTTGTAGGAGTTGAAATAAAAGTCATATACCAAGTTAGAAGCTAATATTCTGTCATTTTTTGTCACATTTTCTGTTGAGTTAAATCCTATTTTGGTTCACTCTGCTCTTGTTATTGCGTTTTATCTTTCTTGATTTCAGAATTTGGTGTAACTAGTTTGATTTAAACTTTCAATGTGCCTATTTCTTATCTTTTGCATGGCATCTATCATACAGACATTCAAATTTTACATACCAAAGCTCTAATTCCACCTACTCACATTTGCTTGAAGCTGTTTATAATTCTTGTTTTTGAATCCATGGTTCATATTTAGTATGATTAAAATGATATTGACATACTTTAATTTCACTTATAAGCCAATTGCTCTTAACATCAATTATGAAACTTGACATGCCAATAATCTTTACTTTTTGTTGTGTTAGGAAATCGCAGCAATGTCAGGAAAGCACCTTCATCAATGGTGCCGCAACCAAAGTTATGATTATGACAGTGATAGCGATAGCGATGACTATTCATACAATCCTCCATGTCAAGAAGTAATTCAGCCAAGAACTGCATATGCGGTTTCTGCAAATGCACCTCCAGTTGTTCGTGTAGAAGGCAACCAGATCAGTAACTACGAACAGACTTGGAGGAGTCATGATCGTAACAGGAAAACCGGAACGTATAGGACCCAATCAATGAAGGAGGTTGCTTCTCATGGTGATACTTTTAAAGAGAGGTCAACTGGCAGAGTTGGCTCCAAAGATGAGTTCAAAACTACCTCCACCTACAGGGTCGGCGACAAAAGTGGATATTCTGAGTATCAGTATCAGGAGAGGTACCGTCGAGTTGATTTTGGCGGTAACAATGGTAGCAGCAGCGGCGGATCCGGAAGTAAGGGAGGATACAGCAACTATTCAACTTCCAAAAAGTATCTCAAATGAAGAGTTGCTTTGTAAGTAAATGCTAGCATGTTTGGCTCTCTAGTTTTGAACTTGGTTTTTCTGTTCGTTGCATACTTTGGTTTTGTTATGTTGTTCTGTGATGTCTGAACTTCTGGCATTTTCCTTTTGTTAGATTTTAAGAGACCCGTTTGTTTTTTTGGTGTCTGTAAATGCTCGTGGAAGTATACAATATACAAAGTATGGATGCTTGTAATTACTTTTGAAATAAGTGAAGCTTAATGCTTGGTTTATATGTTCAAATAGGTGATAAATTATTCTGGG GTCAAAAAATCTAACTCCTTTCCGGGTTTTCTTTCTTCTTCTCTCTTCAACACCAAAATCCAAACACCCCCGGTGTAAGTAGTACTAAAAGCAGGCGATTACATTCACCTGGCTATATATACCCTACGTGGACCCTGATTCAAAACCCTAACCCTCCATTTTTTTCTCAGAGGCAGCCGAAAGGAAATCGCAGCAATGTCAGGAAAGCACCTTCATCAATGGTGCCGCAACCAAAGTTATGATTATGACAGTGATAGCGATAGCGATGACTATTCATACAATCCTCCATGTCAAGAAGTAATTCAGCCAAGAACTGCATATGCGGTTTCTGCAAATGCACCTCCAGTTGTTCGTGTAGAAGGCAACCAGATCAGTAACTACGAACAGACTTGGAGGAGTCATGATCGTAACAGGAAAACCGGAACGTATAGGACCCAATCAATGAAGGAGGTTGCTTCTCATGGTGATACTTTTAAAGAGAGGTCAACTGGCAGAGTTGGCTCCAAAGATGAGTTCAAAACTACCTCCACCTACAGGGTCGGCGACAAAAGTGGATATTCTGAGTATCAGTATCAGGAGAGGTACCGTCGAGTTGATTTTGGCGGTAACAATGGTAGCAGCAGCGGCGGATCCGGAAGTAAGGGAGGATACAGCAACTATTCAACTTCCAAAAAGTATCTCAAATGAAGAGTTGCTTTGTAAGTAAATGCTAGCATGTTTGGCTCTCTAGTTTTGAACTTGGTTTTTCTGTTCGTTGCATACTTTGGTTTTGTTATGTTGTTCTGTGATGTCTGAACTTCTGGCATTTTCCTTTTGTTAGATTTTAAGAGACCCGTTTGTTTTTTTGGTGTCTGTAAATGCTCGTGGAAGTATACAATATACAAAGTATGGATGCTTGTAATTACTTTTGAAATAAGTGAAGCTTAATGCTTGGTTTATATGTTCAAATAGGTGATAAATTATTCTGGG ATGTCAGGAAAGCACCTTCATCAATGGTGCCGCAACCAAAGTTATGATTATGACAGTGATAGCGATAGCGATGACTATTCATACAATCCTCCATGTCAAGAAGTAATTCAGCCAAGAACTGCATATGCGGTTTCTGCAAATGCACCTCCAGTTGTTCGTGTAGAAGGCAACCAGATCAGTAACTACGAACAGACTTGGAGGAGTCATGATCGTAACAGGAAAACCGGAACGTATAGGACCCAATCAATGAAGGAGGTTGCTTCTCATGGTGATACTTTTAAAGAGAGGTCAACTGGCAGAGTTGGCTCCAAAGATGAGTTCAAAACTACCTCCACCTACAGGGTCGGCGACAAAAGTGGATATTCTGAGTATCAGTATCAGGAGAGGTACCGTCGAGTTGATTTTGGCGGTAACAATGGTAGCAGCAGCGGCGGATCCGGAAGTAAGGGAGGATACAGCAACTATTCAACTTCCAAAAAGTATCTCAAATGA MSGKHLHQWCRNQSYDYDSDSDSDDYSYNPPCQEVIQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTGRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK Homology
BLAST of Sed0004116 vs. NCBI nr
Match: XP_022157391.1 (uncharacterized protein LOC111024099 [Momordica charantia]) HSP 1 Score: 187.6 bits (475), Expect = 8.7e-44 Identity = 109/164 (66.46%), Postives = 120/164 (73.17%), Query Frame = 0
BLAST of Sed0004116 vs. NCBI nr
Match: XP_022997473.1 (uncharacterized protein LOC111492379 [Cucurbita maxima]) HSP 1 Score: 168.7 bits (426), Expect = 4.2e-38 Identity = 98/154 (63.64%), Postives = 115/154 (74.68%), Query Frame = 0
BLAST of Sed0004116 vs. NCBI nr
Match: KAG7029798.1 (hypothetical protein SDJN02_08141, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 163.3 bits (412), Expect = 1.7e-36 Identity = 97/156 (62.18%), Postives = 112/156 (71.79%), Query Frame = 0
BLAST of Sed0004116 vs. NCBI nr
Match: KAG6598857.1 (hypothetical protein SDJN03_08635, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 161.8 bits (408), Expect = 5.1e-36 Identity = 96/155 (61.94%), Postives = 111/155 (71.61%), Query Frame = 0
BLAST of Sed0004116 vs. NCBI nr
Match: XP_022929740.1 (uncharacterized protein LOC111436237 [Cucurbita moschata]) HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35 Identity = 91/145 (62.76%), Postives = 105/145 (72.41%), Query Frame = 0
BLAST of Sed0004116 vs. ExPASy TrEMBL
Match: A0A6J1DXX9 (uncharacterized protein LOC111024099 OS=Momordica charantia OX=3673 GN=LOC111024099 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.2e-44 Identity = 109/164 (66.46%), Postives = 120/164 (73.17%), Query Frame = 0
BLAST of Sed0004116 vs. ExPASy TrEMBL
Match: A0A6J1KE05 (uncharacterized protein LOC111492379 OS=Cucurbita maxima OX=3661 GN=LOC111492379 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 2.0e-38 Identity = 98/154 (63.64%), Postives = 115/154 (74.68%), Query Frame = 0
BLAST of Sed0004116 vs. ExPASy TrEMBL
Match: A0A6J1EV61 (uncharacterized protein LOC111436237 OS=Cucurbita moschata OX=3662 GN=LOC111436237 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35 Identity = 91/145 (62.76%), Postives = 105/145 (72.41%), Query Frame = 0
BLAST of Sed0004116 vs. ExPASy TrEMBL
Match: A0A5D3CHW8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00440 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 3.0e-34 Identity = 94/151 (62.25%), Postives = 108/151 (71.52%), Query Frame = 0
BLAST of Sed0004116 vs. ExPASy TrEMBL
Match: A0A5A7VGP1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00800 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 5.1e-34 Identity = 94/151 (62.25%), Postives = 108/151 (71.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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