Sed0003089 (gene) Chayote v1

Overview


Name	Sed0003089
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA replication complex GINS protein PSF3-like
Location	LG03: 2303102 .. 2307081 (-)
RNA-Seq Expression	Sed0003089
Synteny	Sed0003089

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAATCAACATTTGGAAAATTGGGCGCCTCAGTCTCGCTTTCTTTCTTCGACTGCAAATTCACCATCGCCAATTTTGCAATCCAGGTGGCCGCTCTCTCCATCGCTCAAATCATTATTCCTTTTATTGATTTTGTGTTGTTCTTGATTCTGTTTCGATTTCGTTTCATTTGCAGTTTTGTATACAATTTCGTTATTGGCATATATCTGTGTGTATTGATTCTCAGAAGTTTGTATCATGTTTCATTTCAGTGGCTGGATGCATAAGTTGTTTTTTCAATTTTCTATTGTTGTAATTACGAATTTATCACCTGTGACATTAATTTGTAGACACCTCCCGTGTCTATGTTCCTTTGATGTCGCTCGGTGTCTGGCCTAAAGATGGGCATGGTTACGCGGGTGTAGTGGACCGAAACTTCTATTTATCGGTTTCAAAAAAAAAATTACGAATTTACTCATGCATTGGTTGGAAAAATTAAAATGAAAAAAAAAAACCTAATCCGTGTCTTTCTCCTTCCTCACGCCCTTACTGTTTTCCGAACGAAAATCTCCAAGTTCTTGCACACTGAAGCTTCCCCACGACAATCAAGTTTCGTTAAATATTTTTTAATCTTTTTTGCTTGTTTTTTTCTTAATAACAGAACAGAACTATTAAATCATTATGTTTAACATTTTTTAAATATTTGTCATGTTTTTGTTTAATATTGGATAATGTATTAATGTGTTTTACTGGTTTTGTTCCACCACCATGACATTAAATGCTTCAAACATTTCCTAAAAAATATATAAAAAAATTGGTGTATCTCAAATGTATCCGTGTCTTAGTTTTTTAGAAATTGAGTTCAACCCGTTATGTTTTATCCGTGTTTGTGTCTGTTCCACCGAGAAGTAAATGTAAGTTTGTAATTGGATGTGAGACATTTGAAAGCTTTGAAGATCTGCAGTTTGTATATTTAACTGGTTATTTTTTTTCTACTTTGCTGTCTACTGTCAAGTAGTTTTACAATTTTGCTTTCAGTTTTTTAACTCCCGGACCGGGCCTTGGCACGGGCGTGTGTGCCCGTTATTATGTGGTGAGGTGAAGCTACGATTCTCGATTAAAAAAAAAACAAAAAATATTTATATAAACATTCTTGATTTCCTCTAGAATATTGTGATTGTGTTTTAGCTGGCATTAAATTTCCGGCAGTTTAGGTGGTGCCAGTTGAAATATATCATTTTGGACGTTGAGTAATTTCTTCTGGAGGCATTGGAGCAACGAGTTGAATACCCTAAGAAATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGGTCAATATCTTATACTTTTACCTGATAAGGTCTTATAAACTTGCAATCTAAATATGGATTCTTGTTTTTTCCTCTTGACAGCTTGTCTCAGTGATGTTCCAAAAGGCAGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCAGTGAGTTCCAGTGATTAGTAGCCCATATGTTATGGGTGTTGAATTGAACGAAAAACTTATGTTTTCTTATTTGGTGTAATTTCAGGTTGAATCTGGATCCAAAGTAGAGGTACCCTTCTGGCTTGCAAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTACCTGCTTGTTTTAACCAAAGGTAGCAATCGCTATTAATTACATTCAGGCTTTGCATACGAACAATAATTTCCATAAACTTAGTGCTATAGGCTTTTTGGAAGCTTAAGATGTTGATGCTCTTATTTGCTAAGCCGCTTTTCTCTCCCTAAATGTTGACCCGCAATGACACAGAATTCAGATTCCTTTTCATTTAATTTTGTGATTGCTTAATTCGTGCATGATTGCCTTTTTTTCATTAGCTAATTACTTTAGGAGCCTAAACTTCTGAACTGGTATCCCAAGAGTACAGGAATTAGTCAGATTTTGAGGTCATATTAAAGTTTTTGGTGCTGTTATTTTTAATTTAAGAACTACTCTTCTCGCTTTTGCTCATGATTCATACCGGAAACAAGTGATGTTAATGGCATTGCCTTCCAGTTTCATCAATTAAAACAGAAGTAATGGATATTCATGGCCACGAAATTGTGGTATCCTCCAAAACCATTTGAGATTTATTTTATAGAATCTCAATAGAATGCCTACACTTGCTCTGTAGAAGCTGACCCAAAAAGAAAGTGATTTTTTCCTTTGTGTAGTATTCCAAACATCTCTGATTTTCATGTGCTAACTATTTTATTACCAGCAGAAATTTCCTGCCCTCATTAGAATTTCGTGATTAAAGGAAACTGTAAGATTTTCATAATAATATTTATTATCGTATAAAAAAAGATTACAATATTTTAGTTGACTAGTGTTCTTGTTCTCTTACCAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATTTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCGCTGTGAGTACATTAGGATCCAACTCTTTATGTTTATGGGATATTTTTTTTAACATCTATGAGAGTCTAAGCCCCACATGTGCGGCCTTCAATTATTCTCACCATATCTATTTTAAAGTAAGTGTGTTAAGTAGTACACTTTCGTTTGAAATGCATTTTGTTTTCACCTTTGACAGAAGTACCATTCAGAAAGCATCCCATTTTACAGGCCGTTTTTAAACATAATAAGTAGGATATCTAACCACTAATGTTTTTTAACTGTCGTTTTAAATTAGAGGCAAAGCCCAAAAGGCGTGCCTCAGCCTCAAAAAGACCCTGGGCTGAGTGGGCTCGATGACGGCACCCCATCTTTGAAAGGTAGTAAAGGCACGGATAGGAAAGCCTGCCAAAGGATAGGAAATCTTCAACTTAAGCTTGCATATTAAGTATGTCGGTTGCACATCCTAATAAGGATTAAGGATCCTGCATTTAGTCTTGAACTCAAAGCAGTATTTTATACTAATCGGGTAGCATGTTGTCATCTCAAGTTTTTAATCACAATGAATAGCAATCTCATTTTCATTCCATTCTATATGTACACCAATAAAAATGCCCAAAGATTAAAAACTGACTATCTAACCCCTTCTACACATGGAGTATATCTTGTAAAAATTGGAGAGTGCTTGTTTCCTCGATCTCGTGCATGTCGGTTACCTGTTTGGTTGGGATGTGCTCTACCAAATCTCTGTTCATAATATTTGTTTGTGTTCCTAAATGGACAAGAACGCAATAGATCGAATGCCACTTCTCAGTTTTCTCTCACAAATATCAACAACAGGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGCAGGTACAAGGAAGTTCTTACCAAGGCTCACAATGTAGTATTTGCTGCAAGTTCTAAATACTGGACACTCCTATCAAAAGAAGAAACCAAAAGTGAGATTTTTGTTCAATGATTCATCTGTGTTTTCATATTTCGTGCGTTTCTTCGAGTTCACATCAATGTAATCCTTGTGTGCAGTGTATGAGGCAGCTCAATCCTCCATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAAAGGAAGTCTTCTGAGTAGGTACTAGTTTGAGCTTAAATGTATTGGAAAAGTAGTAATTTATTCATGATTTTTTTTTACAAGTTCTTCATTGTTCCTATTTCAAAAGCTTTTAAATGGGGAGGTCTTACAATGTTGCTAACATGAACAATAGTTCAATTGGTATATGTGTGCGCGTTCCCATTGACCAACAATCTCTCAGCTTCAATTATTGTTGAACTAAAAGGATGGGGAGGTTTGTCGATTTCAAAGGATATTTCCGAAAAGCCATACATGCCTTTGTTGTCTTAACTGTCTATAGGTTGAGAATAATAGTTAATGTTGAGATGTCCTTAGAACATGATCGATTCTATAGGTCGTATAATTG

mRNA sequence

TAAAAAATCAACATTTGGAAAATTGGGCGCCTCAGTCTCGCTTTCTTTCTTCGACTGCAAATTCACCATCGCCAATTTTGCAATCCAGGTGGCCGCTCTCTCCATCGCTCAAATCATTATTCCTTTTATTGATTTTGTGTTGTTCTTGATTCTGTTTCGATTTCGTTTCATTTGCAGTTTTGTATACAATTTCGTTATTGGCATATATCTGTGTGTATTGATTCTCAGAAGTTTGTATCATGTTTCATTTCAGTGGCTGGATGCATAAGTTGTTTTTTCAATTTTCTATTGTTGTAATTACGAATTTATCACCTGTGACATTAATTTGTAGACACCTCCCGTGTCTATGTTCCTTTGATGTCGCTCGGTGTCTGGCCTAAAGATGGGCATGGTTACGCGGGTGTAGTGGACCGAAACTTCTATTTATCGGTTTCAAAAAAAAAATTACGAATTTACTCATGCATTGGTTGGAAAAATTAAAATGAAAAAAAAAAACCTAATCCGTGTCTTTCTCCTTCCTCACGCCCTTACTGTTTTCCGAACGAAAATCTCCAAGTTCTTGCACACTGAAGCTTCCCCACGACAATCAAGTTTCGTTAAATATTTTTTAATCTTTTTTGCTTGTTTTTTTCTTAATAACAGAACAGAACTATTAAATCATTATGTTTAACATTTTTTAAATATTTGTCATGTTTTTGTTTAATATTGGATAATGTATTAATGTGTTTTACTGGTTTTGTTCCACCACCATGACATTAAATGCTTCAAACATTTCCTAAAAAATATATAAAAAAATTGGTGTATCTCAAATGTATCCGTGTCTTAGTTTTTTAGAAATTGAGTTCAACCCGTTATGTTTTATCCGTGTTTGTGTCTGTTCCACCGAGAAGTAAATGTAAGTTTGTAATTGGATGTGAGACATTTGAAAGCTTTGAAGATCTGCAGTTTGTATATTTAACTGGTTATTTTTTTTCTACTTTGCTGTCTACTGTCAAGTAGTTTTACAATTTTGCTTTCAGTTTTTTAACTCCCGGACCGGGCCTTGGCACGGGCGTGTGTGCCCGTTATTATGTGGTGAGGTGGTGCCAGTTGAAATATATCATTTTGGACGTTGAGTAATTTCTTCTGGAGGCATTGGAGCAACGAGTTGAATACCCTAAGAAATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCAGTGATGTTCCAAAAGGCAGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCAGTTGAATCTGGATCCAAAGTAGAGGTACCCTTCTGGCTTGCAAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTACCTGCTTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATTTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCGCTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGCAGGTACAAGGAAGTTCTTACCAAGGCTCACAATGTAGTATTTGCTGCAAGTTCTAAATACTGGACACTCCTATCAAAAGAAGAAACCAAAATGTATGAGGCAGCTCAATCCTCCATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAAAGGAAGTCTTCTGAGTAGGTACTAGTTTGAGCTTAAATGTATTGGAAAAGTAGTAATTTATTCATGATTTTTTTTTACAAGTTCTTCATTGTTCCTATTTCAAAAGCTTTTAAATGGGGAGGTCTTACAATGTTGCTAACATGAACAATAGTTCAATTGGTATATGTGTGCGCGTTCCCATTGACCAACAATCTCTCAGCTTCAATTATTGTTGAACTAAAAGGATGGGGAGGTTTGTCGATTTCAAAGGATATTTCCGAAAAGCCATACATGCCTTTGTTGTCTTAACTGTCTATAGGTTGAGAATAATAGTTAATGTTGAGATGTCCTTAGAACATGATCGATTCTATAGGTCGTATAATTG

Coding sequence (CDS)

ATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCAGTGATGTTCCAAAAGGCAGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCAGTTGAATCTGGATCCAAAGTAGAGGTACCCTTCTGGCTTGCAAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTACCTGCTTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATTTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCGCTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGCAGGTACAAGGAAGTTCTTACCAAGGCTCACAATGTAGTATTTGCTGCAAGTTCTAAATACTGGACACTCCTATCAAAAGAAGAAACCAAAATGTATGAGGCAGCTCAATCCTCCATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAAAGGAAGTCTTCTGAGTAG

Protein sequence

MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRKRKSSE

Homology

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BLAST of Sed0003089 vs. NCBI nr
Match: XP_022962205.1 (DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962214.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962222.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_023549787.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo] >XP_023549796.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.1 bits (902), Expect = 3.0e-93
Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           MTNYYDIDDILAEEELVSVMFQKAVNGV IDPSSETDSVESGSKVE+PFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKEVLTKAH  VFAASSKY TLLSKEETKMYEAAQSSMTAFKKWR+GGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

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BLAST of Sed0003089 vs. NCBI nr
Match: KAG6602618.1 (hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 350.9 bits (899), Expect = 6.7e-93
Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           MTNYYDIDDILA+EELVSVMFQKAVNGV IDPSSETDSVESGSKVE+PFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKEVLTKAH  VFAASSKY TLLSKEETKMYEAAQSSMTAFKKWR+GGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Sed0003089 vs. NCBI nr
Match: XP_022990174.1 (DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990176.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima])

HSP 1 Score: 350.9 bits (899), Expect = 6.7e-93
Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           MTNYYDIDDILAEEELVSVMFQKAVNGV IDPSSETDSVESGSKVE+PFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKEVLTKAH  VFAASSKY T+LSKEETKMYEAAQSSMTAFKKWR+GGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Sed0003089 vs. NCBI nr
Match: KAG7033298.1 (PSF3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90
Identity = 177/193 (91.71%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDS--------VESGSKVEVPFWLA 60
           MTNYYDIDDILA+EELVSVMFQKAVNGV IDPSSETDS        VESGSKVE+PFWLA
Sbjct: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVSWISRRQVESGSKVELPFWLA 60

Query: 61  KELHLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSW 120
           KELHLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSW
Sbjct: 61  KELHLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSW 120

Query: 121 LLSTFKSRYKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQ 180
           LLSTFKSRYKEVLTKAH  VFAASSKY TLLSKEETKMYEAAQSSMTAFKKWR+GGPRFQ
Sbjct: 121 LLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQ 180

Query: 181 KASFLGRKRKSSE 186
           KASFLGRKRKSSE
Sbjct: 181 KASFLGRKRKSSE 193

[Close]

BLAST of Sed0003089 vs. NCBI nr
Match: XP_008441464.1 (PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008441465.1 PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo])

HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90
Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           MT+YYDIDDILAEEELVSV+FQKAVNGVGIDPSSETDSVESGSKVE+PFWLA+ELHLRQV
Sbjct: 1   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKEVLTKAH+ VFAASSKY  LLSKEETKMYEAAQSSMTAFKKWRMGGPRFQ+ASFL RK
Sbjct: 121 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 180

Query: 181 RKSSE 186
           RKS+E
Sbjct: 181 RKSTE 185

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BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q7ZT01 (DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.8e-14
Identity = 54/191 (28.27%), Postives = 91/191 (47.64%), Query Frame = 0


Query: 3   NYYDIDDILAEEELVSVMFQKAVNGVG-IDPSSETDSVESGSKVEVPFWLAKELH--LRQ 62
           N+  ++D+L  +E +    +     +G +D   ++DS+  GSK+E+P WLAK L+   R+
Sbjct: 17  NFLSLEDLLMSQEKLPCCIESGFPRLGFLDKGGDSDSIPEGSKMELPLWLAKGLYDNKRR 76

Query: 63  VAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRT--IGSWLLSTF 122
           V  + LP  + +  R    ADA  VDL     ++Y FG ++          I   +L TF
Sbjct: 77  VLSVELPKIYREGWRTVFSADANVVDLHKMGPHYYGFGSQLLNFDSPENPEIAKTILQTF 136

Query: 123 KSRYKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFL 182
             R++ ++  + N     +S     L + E  ++ A Q  + AF+ W  G      AS L
Sbjct: 137 VGRFRRIMDSSQNAYNEDTSGLVARLDELERSLFRAGQRGLNAFQSWERGKAAQITASNL 196

Query: 183 ---GRKRKSSE 186
               +KRK +E
Sbjct: 197 VQNYKKRKFNE 207

[Close]

BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q4WQ54 (DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=psf3 PE=3 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 43/170 (25.29%), Postives = 83/170 (48.82%), Query Frame = 0


Query: 3   NYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHL----- 62
           +YYD+D IL + + +   F+  V G+GI   +  + +++G+++++P WL   L +     
Sbjct: 2   SYYDVDSILTDSQKLPCTFELEVPGLGILEGNPGEDIKAGTRIDLPLWLGVMLSIGARLG 61

Query: 63  -RQVAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLST 122
             ++  + LP+  + R    ++AD   VDLRS   +FY    ++  L  +  +   L++T
Sbjct: 62  TSRLVTLDLPSALSDRVVNALKADPRTVDLRSLAPHFYSLSERVLDLFEEEEMVDVLINT 121

Query: 123 FKSRYKEVLTKAHNV--VFAASSKYWTLLSKEETKMYEAAQSSMTAFKKW 165
           FK R  E+   AHN        + +   L + E +++  A  S    + W
Sbjct: 122 FKKRAAEIADHAHNPKGALGEGADFLRGLDETERQLFRVAHDSARETRIW 171

[Close]

BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q9UTC3 (DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=psf3 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 3   NYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQVAV 62
           +YYDID IL+E + V      ++ G+G     E   V +GSKVE+PFWLA+ L +     
Sbjct: 2   DYYDIDSILSENQKVPCTSTVSIPGLG----HEGRMVPTGSKVELPFWLAEVLAINSFVS 61

Query: 63  MGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 121
           + +PA F+   R  ++A+   V +R    ++Y F  K+  L+ D ++    L+T +SR
Sbjct: 62  IHMPAPFSSVVRNALKANPNSVSIRDITTHYYHFAEKMLHLISDDSLVQISLNTLRSR 115

[Close]

BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q54EH6 (Probable DNA replication complex GINS protein PSF3 OS=Dictyostelium discoideum OX=44689 GN=gins3 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.1e-11
Identity = 41/163 (25.15%), Postives = 82/163 (50.31%), Query Frame = 0


Query: 3   NYYDIDDILAEEELVSV-MFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQVA 62
           +Y+DI+DILAEE+ ++   F  A N   ++  S    ++ GSKV++P+W+A  L      
Sbjct: 2   SYFDINDILAEEQKITCNFFYDAYNLGQLEEGSRDPDMKKGSKVDLPYWMALALAKSNFV 61

Query: 63  VMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSRY 122
            + +P  +    + ++ AD   + +R    Y+ + G +++   GDR +   L   F+ R+
Sbjct: 62  SVIMPPEYQDEYKNKLIADPNVISMR-LFPYYDKIGVQLSDFFGDRKLKLLLFRVFRERF 121

Query: 123 KEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKW 165
             + +++ N+     SK    L+ +E +++     S   + KW
Sbjct: 122 LNIYSQSINLKETDISKILGNLTYQEREVFSNGYKSSNDYDKW 163

[Close]

BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q5AFK3 (DNA replication complex GINS protein PSF3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PSF3 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10
Identity = 43/173 (24.86%), Postives = 82/173 (47.40%), Query Frame = 0


Query: 2   TNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQVA 61
           T+YYD+DDILA+ E ++  F   V G+G    +    +   +K+E+P WL+    L  VA
Sbjct: 3   TDYYDLDDILADSEKLTCKFNITVPGLGYLEGNPGKPIHEDTKLELPHWLSG--ILATVA 62

Query: 62  V----------MGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGS 121
           +          +  P    ++    I+ D   VDL     Y+Y    K   L  D+T+ +
Sbjct: 63  IDEDSNINFLDLADPDIIKEKVINAIKTDPLAVDLHKLTPYYYSLILKWGNLYTDKTLIA 122

Query: 122 WLLSTFKSRYKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKW 165
            +++  K+R  E+   ++N     ++++   L + E  ++++   S  + +KW
Sbjct: 123 NVMNCLKARSLEIYNFSNNANKTLNNEFLYTLDEFERALFKSTSDSNKSMRKW 173

[Close]

BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A6J1HEE0 (DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462725 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           MTNYYDIDDILAEEELVSVMFQKAVNGV IDPSSETDSVESGSKVE+PFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKEVLTKAH  VFAASSKY TLLSKEETKMYEAAQSSMTAFKKWR+GGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A6J1JM79 (DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LOC111487145 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93
Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           MTNYYDIDDILAEEELVSVMFQKAVNGV IDPSSETDSVESGSKVE+PFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKEVLTKAH  VFAASSKY T+LSKEETKMYEAAQSSMTAFKKWR+GGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A1S3B3H3 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103485572 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.2e-91
Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           MT+YYDIDDILAEEELVSV+FQKAVNGVGIDPSSETDSVESGSKVE+PFWLA+ELHLRQV
Sbjct: 1   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKEVLTKAH+ VFAASSKY  LLSKEETKMYEAAQSSMTAFKKWRMGGPRFQ+ASFL RK
Sbjct: 121 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 180

Query: 181 RKSSE 186
           RKS+E
Sbjct: 181 RKSTE 185

[Close]

BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A5A7UGU7 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002360 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.2e-91
Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           MT+YYDIDDILAEEELVSV+FQKAVNGVGIDPSSETDSVESGSKVE+PFWLA+ELHLRQV
Sbjct: 23  MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 82

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 83  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 142

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKEVLTKAH+ VFAASSKY  LLSKEETKMYEAAQSSMTAFKKWRMGGPRFQ+ASFL RK
Sbjct: 143 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 202

Query: 181 RKSSE 186
           RKS+E
Sbjct: 203 RKSTE 207

[Close]

BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A6J1BYI2 (DNA replication complex GINS protein PSF3-like OS=Momordica charantia OX=3673 GN=LOC111006426 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 170/185 (91.89%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           MTNYYDIDDILAEEELVSV+FQK VNGVGIDPSSETDSVESGSKVE+PFWL +ELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVVFQKGVNGVGIDPSSETDSVESGSKVELPFWLGQELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             MGLPACFNQRTRLEIQADAAFVDLRSRC YFYEFGCKIAPLVGDRTIGSWLLSTFK R
Sbjct: 61  VAMGLPACFNQRTRLEIQADAAFVDLRSRCPYFYEFGCKIAPLVGDRTIGSWLLSTFKIR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKEVLTKAH+ +FAASSKY  LLSKEET+MYEAAQSSMTAFKKWRMGGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHSAIFAASSKYLALLSKEETEMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Sed0003089 vs. TAIR 10
Match: AT1G19080.1 (GINS complex protein )

HSP 1 Score: 255.8 bits (652), Expect = 2.7e-68
Identity = 124/184 (67.39%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           M  Y+DIDDIL EEE V V+F K  NGV IDPS+ET+  E GSKVE+PFWLA ELHLRQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             + LP CF+Q+TRLE+QADAA+VDLRSRC YFYEFGCKI PLV DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKE LTK +      +SKY + L+KEET +YEAA  SMTAFKKWR GGPRFQ+AS LGRK
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

[Close]

BLAST of Sed0003089 vs. TAIR 10
Match: AT1G19080.2 (GINS complex protein )

HSP 1 Score: 255.8 bits (652), Expect = 2.7e-68
Identity = 124/184 (67.39%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           M  Y+DIDDIL EEE V V+F K  NGV IDPS+ET+  E GSKVE+PFWLA ELHLRQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             + LP CF+Q+TRLE+QADAA+VDLRSRC YFYEFGCKI PLV DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKE LTK +      +SKY + L+KEET +YEAA  SMTAFKKWR GGPRFQ+AS LGRK
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

[Close]

BLAST of Sed0003089 vs. TAIR 10
Match: AT3G55490.1 (GINS complex protein )

HSP 1 Score: 255.8 bits (652), Expect = 2.7e-68
Identity = 124/184 (67.39%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQV 60
           M  Y+DIDDIL EEE V V+F K  NGV IDPS+ET+  E GSKVE+PFWLA ELHLRQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             + LP CF+Q+TRLE+QADAA+VDLRSRC YFYEFGCKI PLV DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180
           YKE LTK +      +SKY + L+KEET +YEAA  SMTAFKKWR GGPRFQ+AS LGRK
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

The following BLAST results are available for this feature:

BLAST of Sed0003089 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962205.1	3.0e-93	96.22	DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_02296221...	[more]
KAG6602618.1	6.7e-93	95.68	hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022990174.1	6.7e-93	95.68	DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175....	[more]
KAG7033298.1	1.1e-90	91.71	PSF3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008441464.1	1.1e-90	92.43	PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008...	[more]

BLAST of Sed0003089 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7ZT01	3.8e-14	28.27	DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=...	[more]
Q4WQ54	1.4e-13	25.29	DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC M...	[more]
Q9UTC3	1.3e-11	33.90	DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 9...	[more]
Q54EH6	5.1e-11	25.15	Probable DNA replication complex GINS protein PSF3 OS=Dictyostelium discoideum O...	[more]
Q5AFK3	3.3e-10	24.86	DNA replication complex GINS protein PSF3 OS=Candida albicans (strain SC5314 / A...	[more]

BLAST of Sed0003089 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEE0	1.5e-93	96.22	DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JM79	3.2e-93	95.68	DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3B3H3	5.2e-91	92.43	DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UGU7	5.2e-91	92.43	DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1BYI2	1.2e-90	91.89	DNA replication complex GINS protein PSF3-like OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Sed0003089 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19080.1	2.7e-68	67.39	GINS complex protein	[more]
AT1G19080.2	2.7e-68	67.39	GINS complex protein	[more]
AT3G55490.1	2.7e-68	67.39	GINS complex protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021151	GINS subunit, domain A	PFAM	PF05916	Sld5	coord: 45..147 e-value: 3.2E-8 score: 34.0
IPR038437	GINS complex, subunit Psf3 superfamily	GENE3D	1.20.58.2050		coord: 1..167 e-value: 3.0E-50 score: 172.3
IPR010492	GINS complex, subunit Psf3	PANTHER	PTHR22768	UNCHARACTERIZED	coord: 1..184
None	No IPR available	CDD	cd11713	GINS_A_psf3	coord: 65..167 e-value: 2.33842E-30 score: 105.426
None	No IPR available	SUPERFAMILY	160059	PriA/YqbF domain	coord: 1..66
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	158573	GINS helical bundle-like	coord: 65..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003089.1	Sed0003089.1	mRNA
Sed0003089.2	Sed0003089.2	mRNA
Sed0003089.3	Sed0003089.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902975	mitotic DNA replication initiation
cellular_component	GO:0000811	GINS complex