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Sed0003089 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAAAATCAACATTTGGAAAATTGGGCGCCTCAGTCTCGCTTTCTTTCTTCGACTGCAAATTCACCATCGCCAATTTTGCAATCCAGGTGGCCGCTCTCTCCATCGCTCAAATCATTATTCCTTTTATTGATTTTGTGTTGTTCTTGATTCTGTTTCGATTTCGTTTCATTTGCAGTTTTGTATACAATTTCGTTATTGGCATATATCTGTGTGTATTGATTCTCAGAAGTTTGTATCATGTTTCATTTCAGTGGCTGGATGCATAAGTTGTTTTTTCAATTTTCTATTGTTGTAATTACGAATTTATCACCTGTGACATTAATTTGTAGACACCTCCCGTGTCTATGTTCCTTTGATGTCGCTCGGTGTCTGGCCTAAAGATGGGCATGGTTACGCGGGTGTAGTGGACCGAAACTTCTATTTATCGGTTTCAAAAAAAAAATTACGAATTTACTCATGCATTGGTTGGAAAAATTAAAATGAAAAAAAAAAACCTAATCCGTGTCTTTCTCCTTCCTCACGCCCTTACTGTTTTCCGAACGAAAATCTCCAAGTTCTTGCACACTGAAGCTTCCCCACGACAATCAAGTTTCGTTAAATATTTTTTAATCTTTTTTGCTTGTTTTTTTCTTAATAACAGAACAGAACTATTAAATCATTATGTTTAACATTTTTTAAATATTTGTCATGTTTTTGTTTAATATTGGATAATGTATTAATGTGTTTTACTGGTTTTGTTCCACCACCATGACATTAAATGCTTCAAACATTTCCTAAAAAATATATAAAAAAATTGGTGTATCTCAAATGTATCCGTGTCTTAGTTTTTTAGAAATTGAGTTCAACCCGTTATGTTTTATCCGTGTTTGTGTCTGTTCCACCGAGAAGTAAATGTAAGTTTGTAATTGGATGTGAGACATTTGAAAGCTTTGAAGATCTGCAGTTTGTATATTTAACTGGTTATTTTTTTTCTACTTTGCTGTCTACTGTCAAGTAGTTTTACAATTTTGCTTTCAGTTTTTTAACTCCCGGACCGGGCCTTGGCACGGGCGTGTGTGCCCGTTATTATGTGGTGAGGTGAAGCTACGATTCTCGATTAAAAAAAAAACAAAAAATATTTATATAAACATTCTTGATTTCCTCTAGAATATTGTGATTGTGTTTTAGCTGGCATTAAATTTCCGGCAGTTTAGGTGGTGCCAGTTGAAATATATCATTTTGGACGTTGAGTAATTTCTTCTGGAGGCATTGGAGCAACGAGTTGAATACCCTAAGAAATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGGTCAATATCTTATACTTTTACCTGATAAGGTCTTATAAACTTGCAATCTAAATATGGATTCTTGTTTTTTCCTCTTGACAGCTTGTCTCAGTGATGTTCCAAAAGGCAGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCAGTGAGTTCCAGTGATTAGTAGCCCATATGTTATGGGTGTTGAATTGAACGAAAAACTTATGTTTTCTTATTTGGTGTAATTTCAGGTTGAATCTGGATCCAAAGTAGAGGTACCCTTCTGGCTTGCAAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTACCTGCTTGTTTTAACCAAAGGTAGCAATCGCTATTAATTACATTCAGGCTTTGCATACGAACAATAATTTCCATAAACTTAGTGCTATAGGCTTTTTGGAAGCTTAAGATGTTGATGCTCTTATTTGCTAAGCCGCTTTTCTCTCCCTAAATGTTGACCCGCAATGACACAGAATTCAGATTCCTTTTCATTTAATTTTGTGATTGCTTAATTCGTGCATGATTGCCTTTTTTTCATTAGCTAATTACTTTAGGAGCCTAAACTTCTGAACTGGTATCCCAAGAGTACAGGAATTAGTCAGATTTTGAGGTCATATTAAAGTTTTTGGTGCTGTTATTTTTAATTTAAGAACTACTCTTCTCGCTTTTGCTCATGATTCATACCGGAAACAAGTGATGTTAATGGCATTGCCTTCCAGTTTCATCAATTAAAACAGAAGTAATGGATATTCATGGCCACGAAATTGTGGTATCCTCCAAAACCATTTGAGATTTATTTTATAGAATCTCAATAGAATGCCTACACTTGCTCTGTAGAAGCTGACCCAAAAAGAAAGTGATTTTTTCCTTTGTGTAGTATTCCAAACATCTCTGATTTTCATGTGCTAACTATTTTATTACCAGCAGAAATTTCCTGCCCTCATTAGAATTTCGTGATTAAAGGAAACTGTAAGATTTTCATAATAATATTTATTATCGTATAAAAAAAGATTACAATATTTTAGTTGACTAGTGTTCTTGTTCTCTTACCAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATTTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCGCTGTGAGTACATTAGGATCCAACTCTTTATGTTTATGGGATATTTTTTTTAACATCTATGAGAGTCTAAGCCCCACATGTGCGGCCTTCAATTATTCTCACCATATCTATTTTAAAGTAAGTGTGTTAAGTAGTACACTTTCGTTTGAAATGCATTTTGTTTTCACCTTTGACAGAAGTACCATTCAGAAAGCATCCCATTTTACAGGCCGTTTTTAAACATAATAAGTAGGATATCTAACCACTAATGTTTTTTAACTGTCGTTTTAAATTAGAGGCAAAGCCCAAAAGGCGTGCCTCAGCCTCAAAAAGACCCTGGGCTGAGTGGGCTCGATGACGGCACCCCATCTTTGAAAGGTAGTAAAGGCACGGATAGGAAAGCCTGCCAAAGGATAGGAAATCTTCAACTTAAGCTTGCATATTAAGTATGTCGGTTGCACATCCTAATAAGGATTAAGGATCCTGCATTTAGTCTTGAACTCAAAGCAGTATTTTATACTAATCGGGTAGCATGTTGTCATCTCAAGTTTTTAATCACAATGAATAGCAATCTCATTTTCATTCCATTCTATATGTACACCAATAAAAATGCCCAAAGATTAAAAACTGACTATCTAACCCCTTCTACACATGGAGTATATCTTGTAAAAATTGGAGAGTGCTTGTTTCCTCGATCTCGTGCATGTCGGTTACCTGTTTGGTTGGGATGTGCTCTACCAAATCTCTGTTCATAATATTTGTTTGTGTTCCTAAATGGACAAGAACGCAATAGATCGAATGCCACTTCTCAGTTTTCTCTCACAAATATCAACAACAGGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGCAGGTACAAGGAAGTTCTTACCAAGGCTCACAATGTAGTATTTGCTGCAAGTTCTAAATACTGGACACTCCTATCAAAAGAAGAAACCAAAAGTGAGATTTTTGTTCAATGATTCATCTGTGTTTTCATATTTCGTGCGTTTCTTCGAGTTCACATCAATGTAATCCTTGTGTGCAGTGTATGAGGCAGCTCAATCCTCCATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAAAGGAAGTCTTCTGAGTAGGTACTAGTTTGAGCTTAAATGTATTGGAAAAGTAGTAATTTATTCATGATTTTTTTTTACAAGTTCTTCATTGTTCCTATTTCAAAAGCTTTTAAATGGGGAGGTCTTACAATGTTGCTAACATGAACAATAGTTCAATTGGTATATGTGTGCGCGTTCCCATTGACCAACAATCTCTCAGCTTCAATTATTGTTGAACTAAAAGGATGGGGAGGTTTGTCGATTTCAAAGGATATTTCCGAAAAGCCATACATGCCTTTGTTGTCTTAACTGTCTATAGGTTGAGAATAATAGTTAATGTTGAGATGTCCTTAGAACATGATCGATTCTATAGGTCGTATAATTG TAAAAAATCAACATTTGGAAAATTGGGCGCCTCAGTCTCGCTTTCTTTCTTCGACTGCAAATTCACCATCGCCAATTTTGCAATCCAGGTGGCCGCTCTCTCCATCGCTCAAATCATTATTCCTTTTATTGATTTTGTGTTGTTCTTGATTCTGTTTCGATTTCGTTTCATTTGCAGTTTTGTATACAATTTCGTTATTGGCATATATCTGTGTGTATTGATTCTCAGAAGTTTGTATCATGTTTCATTTCAGTGGCTGGATGCATAAGTTGTTTTTTCAATTTTCTATTGTTGTAATTACGAATTTATCACCTGTGACATTAATTTGTAGACACCTCCCGTGTCTATGTTCCTTTGATGTCGCTCGGTGTCTGGCCTAAAGATGGGCATGGTTACGCGGGTGTAGTGGACCGAAACTTCTATTTATCGGTTTCAAAAAAAAAATTACGAATTTACTCATGCATTGGTTGGAAAAATTAAAATGAAAAAAAAAAACCTAATCCGTGTCTTTCTCCTTCCTCACGCCCTTACTGTTTTCCGAACGAAAATCTCCAAGTTCTTGCACACTGAAGCTTCCCCACGACAATCAAGTTTCGTTAAATATTTTTTAATCTTTTTTGCTTGTTTTTTTCTTAATAACAGAACAGAACTATTAAATCATTATGTTTAACATTTTTTAAATATTTGTCATGTTTTTGTTTAATATTGGATAATGTATTAATGTGTTTTACTGGTTTTGTTCCACCACCATGACATTAAATGCTTCAAACATTTCCTAAAAAATATATAAAAAAATTGGTGTATCTCAAATGTATCCGTGTCTTAGTTTTTTAGAAATTGAGTTCAACCCGTTATGTTTTATCCGTGTTTGTGTCTGTTCCACCGAGAAGTAAATGTAAGTTTGTAATTGGATGTGAGACATTTGAAAGCTTTGAAGATCTGCAGTTTGTATATTTAACTGGTTATTTTTTTTCTACTTTGCTGTCTACTGTCAAGTAGTTTTACAATTTTGCTTTCAGTTTTTTAACTCCCGGACCGGGCCTTGGCACGGGCGTGTGTGCCCGTTATTATGTGGTGAGGTGGTGCCAGTTGAAATATATCATTTTGGACGTTGAGTAATTTCTTCTGGAGGCATTGGAGCAACGAGTTGAATACCCTAAGAAATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCAGTGATGTTCCAAAAGGCAGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCAGTTGAATCTGGATCCAAAGTAGAGGTACCCTTCTGGCTTGCAAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTACCTGCTTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATTTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCGCTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGCAGGTACAAGGAAGTTCTTACCAAGGCTCACAATGTAGTATTTGCTGCAAGTTCTAAATACTGGACACTCCTATCAAAAGAAGAAACCAAAATGTATGAGGCAGCTCAATCCTCCATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAAAGGAAGTCTTCTGAGTAGGTACTAGTTTGAGCTTAAATGTATTGGAAAAGTAGTAATTTATTCATGATTTTTTTTTACAAGTTCTTCATTGTTCCTATTTCAAAAGCTTTTAAATGGGGAGGTCTTACAATGTTGCTAACATGAACAATAGTTCAATTGGTATATGTGTGCGCGTTCCCATTGACCAACAATCTCTCAGCTTCAATTATTGTTGAACTAAAAGGATGGGGAGGTTTGTCGATTTCAAAGGATATTTCCGAAAAGCCATACATGCCTTTGTTGTCTTAACTGTCTATAGGTTGAGAATAATAGTTAATGTTGAGATGTCCTTAGAACATGATCGATTCTATAGGTCGTATAATTG ATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCAGTGATGTTCCAAAAGGCAGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCAGTTGAATCTGGATCCAAAGTAGAGGTACCCTTCTGGCTTGCAAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTACCTGCTTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATTTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCGCTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGCAGGTACAAGGAAGTTCTTACCAAGGCTCACAATGTAGTATTTGCTGCAAGTTCTAAATACTGGACACTCCTATCAAAAGAAGAAACCAAAATGTATGAGGCAGCTCAATCCTCCATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAAAGGAAGTCTTCTGAGTAG MTNYYDIDDILAEEELVSVMFQKAVNGVGIDPSSETDSVESGSKVEVPFWLAKELHLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHNVVFAASSKYWTLLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRKRKSSE Homology
BLAST of Sed0003089 vs. NCBI nr
Match: XP_022962205.1 (DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962214.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962222.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_023549787.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo] >XP_023549796.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 352.1 bits (902), Expect = 3.0e-93 Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Sed0003089 vs. NCBI nr
Match: KAG6602618.1 (hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 350.9 bits (899), Expect = 6.7e-93 Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Sed0003089 vs. NCBI nr
Match: XP_022990174.1 (DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990176.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima]) HSP 1 Score: 350.9 bits (899), Expect = 6.7e-93 Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Sed0003089 vs. NCBI nr
Match: KAG7033298.1 (PSF3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90 Identity = 177/193 (91.71%), Postives = 180/193 (93.26%), Query Frame = 0
BLAST of Sed0003089 vs. NCBI nr
Match: XP_008441464.1 (PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008441465.1 PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90 Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q7ZT01 (DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 3.8e-14 Identity = 54/191 (28.27%), Postives = 91/191 (47.64%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q4WQ54 (DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=psf3 PE=3 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13 Identity = 43/170 (25.29%), Postives = 83/170 (48.82%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q9UTC3 (DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=psf3 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11 Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q54EH6 (Probable DNA replication complex GINS protein PSF3 OS=Dictyostelium discoideum OX=44689 GN=gins3 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.1e-11 Identity = 41/163 (25.15%), Postives = 82/163 (50.31%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy Swiss-Prot
Match: Q5AFK3 (DNA replication complex GINS protein PSF3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PSF3 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10 Identity = 43/173 (24.86%), Postives = 82/173 (47.40%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A6J1HEE0 (DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462725 PE=3 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93 Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A6J1JM79 (DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LOC111487145 PE=3 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93 Identity = 177/185 (95.68%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A1S3B3H3 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103485572 PE=3 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 5.2e-91 Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A5A7UGU7 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002360 PE=3 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 5.2e-91 Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Sed0003089 vs. ExPASy TrEMBL
Match: A0A6J1BYI2 (DNA replication complex GINS protein PSF3-like OS=Momordica charantia OX=3673 GN=LOC111006426 PE=3 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90 Identity = 170/185 (91.89%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of Sed0003089 vs. TAIR 10
Match: AT1G19080.1 (GINS complex protein ) HSP 1 Score: 255.8 bits (652), Expect = 2.7e-68 Identity = 124/184 (67.39%), Postives = 142/184 (77.17%), Query Frame = 0
BLAST of Sed0003089 vs. TAIR 10
Match: AT1G19080.2 (GINS complex protein ) HSP 1 Score: 255.8 bits (652), Expect = 2.7e-68 Identity = 124/184 (67.39%), Postives = 142/184 (77.17%), Query Frame = 0
BLAST of Sed0003089 vs. TAIR 10
Match: AT3G55490.1 (GINS complex protein ) HSP 1 Score: 255.8 bits (652), Expect = 2.7e-68 Identity = 124/184 (67.39%), Postives = 142/184 (77.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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