Sed0002742 (gene) Chayote v1

Overview


Name	Sed0002742
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SMG9-like
Location	LG02: 48274099 .. 48280065 (-)
RNA-Seq Expression	Sed0002742
Synteny	Sed0002742

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGCTTCAAGTATATAACAATTGCACCCCAATTTGATTATTGACCTAAATAAAATTTAAATAAAGAATGAGATTCATAAATAAAATAAAAATCATTTAAAAAACTCTATTCTTTGTCTTCTTCCTCAAATCTCTCGATTCATTAGTAGCCTCGCTACTAAAACCCCAACCAACCGATCAAACACACAGAGCTGCAAGGTTTGCAACAATGGCGGGTTCTACCACCGGTAACTCCTCTTCCAATTCCTCGCCGACTCCTCCTCCCCCCAAAATCCTTCTGGCAAAGCCCGGCCTCGTCACCGGCGGAGCAATTTCCTCCAAGATTGGACGCGGCGCCGGCGCCGACGATGAAGCAGCTTCGATCCGGTCCCGTCTCCCTTCTCTTGGATCCCTAAATCTTCTCTCCGATTCCTGGGACCTCCACATTGACCGTTTCCTCCCTGTAAGCAACCCTAAACCTGATTTTGAACTGTTGCAATCAAATATGTTCATCGGTGTTTTTGGGCTTGGAGATTGTTCTAGGGTTTTCTTTATTTTGATGTACTGCTGAAATGAGTCTATGTTTTTTTCACTCCCTTTTAATTAAAATCAAAACCATCGTAAATTTTTCAGTCCATCAGCTGCAGAAATGGGCGTTTCTTTTTAGGTGTAGTTATCGAGTTGGATCGATTGGTTTGGAATCATTTTGTTTCTCAATAGTTCAGGGTGGTATCTTGTCTCTCGGGTTCTGTTTGCTGTTTTTAATGGGTTGTGGGCTGAATTTGAGAATTGGTCAGTGGTGTACATGGTTGGGTTGGATTGCTGAAATTTTATGGACTAATCGAAATTTGGTTCGGTCAAGTCACCAACCCGTTAATTGATGACCTGGGAACTTGGAGCTTCGCTTCTCTGAACCCGAGAGCATCACCGTTCCATCCCTAGACGGAGCATCGTAGGTGGGAAGAGGGCCACTTGAAAAATTCATCTCCACGCCAATCTCGAACTTGTGACTATGCTACCCCTAGGACGTCAAACCTTTTGTATTTAACTAACCCAATGCAACCCAACCCGTATGGGTTAGAGAAAAAATGCATGATAACATACTTAAACTTAGGTTATCGATGTTATTAGTATGTTTCTTATCAATATGTTAAGATCATATCGCACTAGTTTATCTTATACACATATTACTATTCTTAATTTGGGTTGGGTTGGAATGAATTAGCAAAAAAATTGATCAATCAAGAATCGATCTAACCTAACAAAAATTATAAAATCATAGTCCAACTCAAAGAAGATTATAACTTAACTCAACTCTTACAATTTGGGTGAATAGTTCAGGTTGCTCGGGTTATCGGTATTTTTAGTACACACCTAGAACTGGTGGGCAGTCCAATTAATATTTCCTTTACTACCTCTACAGTTTTTGACTGAGAATATGGAGTTCGTAGTGGTGGGAATAATTGGTCCACCAGGAGTTGGTAAATCGACGATCATGAATGAGATTTACGGATTCGATGGAAGTTCTCCAGGTGAGGGATATCTGTGATGCTGTGTTCTTAATTTGTTTGTTCTTTTTTCATTTATTCTCTTATAGATTTTAGTGACCAACCATCCTTCTCTACATGTTGCAGGTATGCTACCTCCATTTCCAATACTTACTGAAGATGTTAAAGCAATGGCTAGACATTGTACACTGGGTATTGAGCCTCGAATTTCTTCTGAGAGGATCATACTTCTGGATACTCAGGTGTTTTTCTAGTAATTTTTTCTTTTTTTTAAATGTTTGTATATAAAAGGGAAACACTTGGTTCACTTTCCCATTTTTGTGTTTTTGGTTAACTGGATCAGGTATTTGTACTGATAAATGCATGATTCCCAATTGGTTAATAGGTTTTCAAACTGTTTAAGGAGAATGCGGTGATGTATATTATGATAATTATATCCTATCGATTAGCCAACCATCATGGTAGCCTAGTGGTCAAAAGGGCCACAATAAACCAAATGGTTATGGGTTCAGTTTATACTGGCCACATGTCTAGAAATTAATTTAATACGGGTTTTCTTGACATCCAAATATTGTAGGGTCAGACGGTTTGTACTATGAGAATAGTCGAGGTGCGCGTAAGCTTGCTTATACACTCGTGGATATATAAAAAAAAATCTTCTAGCTAGCCTGATTTGAGCGATTTTCAATTTCAAATGAAGCTATTTCAATAAACAAAAGTCGGTGATTGGTGCACTTTGAGAAATGAGATTCTCTTTTTGCTCGAGGGACGAGGATCACTCCAAGTTGTTGAGAAGTCCAGATGAACTATAAAAACTACCAATTTGTAAGCTAGTTAGAAATCCATTGAACTAATGCCTATACCATATACTTCACCATTAGAGGAAGGGGAGCCTCATTACTCTTCTCTTTTTAAATTTAAATACTCAATTGGGGTGCTTGGGGATATCAGATATCTTCAAGAAGATCCTCTGATTTGGAGGTCATTGGGGAATCCCCTTATTGGGCTTGATTCTTTTTTTTCTTAATGAGAAACGATAACTTTCATTGATGTATGAAAATTACAAAAGAGCTAGAATAGAATATCAATAGTCAGTTATAAAAAGCACTTCAATGATAATATAATGTAGAAATACTATATCCATTAAAAGGAGGAAAAGATTGAGCCCATGAGATTGCAAGGTACGTGATTTCCTCCACTAAATTTTGTTGGTTGATATAATTAAATTTAACCCAATCCATCAGCTTAGGCTTTTGGATTGATTGATAGTTTAACATAATTCAACATGGTATCAGAGCAGGAGGTCATGAGTTCGAATCCCTGCCAAGTCATTTCATCCCCAATTAAAATTAAAGTCCACTTGTAGGGCATTTCTCAACTTTCAAAGCCCACAAGTGAGGGGGAGTGTTGGTTGATATAATTAAATTTAACCCAATCCATCAGCTTAGGCTTTTGGATTGATTGGTAGTTTAACATAATTCAACAAATTTTTGAATCCTCAATTCAGCTTTGGTGCATTTTAATGCTTCTTTTGGATTCACAAATAAATCTTTTAGTGACCTCCCTTGCCTTTTGTCCCCAATAGTTGGATATCCTGTATGTTATTATGTTTTCTATTGTGTCCCCTTGGTTGATTTGGCCTTTGTGTTTTAGTGGCCTTTTTCGGGAAGCTAGTTTTCTTATCAAACAATGGGGGAAAACATGAATCCACCAAATATATAGCATGTCTTTCCAGTTTTCTCGTTGTACTACTGAAATTTTGGTTCGAGAACCTCTTTGATGAATGCTTGAAAATTGCCTTTGTCCCACTAGTTTGAATGGAAAAACTCAGGTTCATAAATTTAAACGGAAATAGAACAAACAATATTCGTTTATGGGTTGTACCGTTTACATTGGTTTAATGTTGACAGACTAATGGTGATTGGTGATGACGCATAAATCTTCTGAATTCTTGTGCATTTTTTGGGATTTGTAAAGTTGTATATCTTTGGCTTGTTACTTACAGTTTTGCATGATAATTTGGTAATTGCAGCCTGTGTTCAGTCCTTCTGTTTTAGCTGAAATTATGAGACCTGATGGTTCATCCACCGTTTCAGTTATCAGTGGCGAATCATTATCTGCTGAATTGGCCCATGAACTTATGAATATCCAGGTAACTCCAAAGAGAAGTTCTTCTTTGTTCGCGTTTTTAACGGACTAGGGGATGGGTTGGAATCGGAATTGGAATAGGTTTAGAGTTTCACTAGCGCTAATTGACCTGTATCTTCGACTTCTAGAGATTGTTGGTTTGAATCTCCCTACCCCCAAATATTGTTGTACTAGGAAAACTATTCGGTTCATGATTATATAAAAATTTCTATTAGCGTGGGATTCTTTTCCTTTGTGGCTTATGACGTAAAAATAGTATCTTATAAATTTCTTCCCATTATTCTGCAAGGATTCTTTTAGCTCGGCATTCTTCTAGCGTCCATTTGCAACATTGTCCTTGTGATATCAGATGGAGTTCACGATCTAAATATGTGGCGTTTAATGTCAACTGTAAGTTGGTCCTTTATCAAGATCATCTGTTTTTTTAACCATGTTATATCATGAAGCTTTCTTTACTTGTTGCTTTATCAACACTTATTTCTTGATTATTTCTTGGTTGTTACATTTTGAAATTTGATGCTGTCATCAATTATTCTTTTTTGCAGGTTGACATGCTTAAACATGGCTTGCCCGATCCATCTTCTCCCACTTTTTCTCATCCACAAAACTCTAATGTAGGATCCGAGAAGGAATACAAAGATAAAACTTTTACGAGTGGAGAGTATATGGCAATTCCGATCTTTGTTCATGCGAAGTGAGTGAAAACCTTCTACGCTTTTATGACATTGTTTTTTAAACAAGATATAGAATGTACTTGATATGGATAACGCCAGCTCTAGGCTAAGAAACTATTACAATCACATGGAAGAACATCCTATAGATTGTAGATTTCATGTCCCTGCCCTGCAAAACCGTAAACATCGTGATACACTTAAGAAAGTTTGATCTCCTAAACGTTATCTCGGCTAAAAAACTTGAAATAGTATGTAAAGAAACTCATAATTTAACGAGTTTGATAAGTCATAAATGATCAGAAGAGTAACAAATGCCATAGATGAAAACAATATTTTTAGGCTTGATTTTCAAAAACCAAAAGTCAAATGGTTATTAAAAGGGGTGAACATAGTAACTGATTGGTGGTCTGTTTTTTTTTGTAATCATGAGCAGAGTGCAAGATGAAGATCTTGTTCCACACAATATCTTGCAGTTGAAGAGAGCATTTACCCACTATTTTAGAACCTCATCATTTATGGGAGCCAAATGTGAAAAAGTCCATAGTGAGCAACTGCTTTCCTCTGTGGTGTCTGATACCGAAAATTTAGATGTAGATGGTGAAGATCGAAGGTTGCTTGTCATCCCAAATCGAAACAAGGACGACTCTACCAGTGGTCAATATGAAAGTTTTAACTTAGCTCTGTGGAAGCTAAGGGATCAGGTCTGTAGTTCACCATTACCTAATTTTTTTTATCAACTCTTTATATAGGCTTTTAAAGCTCCACAAGTTCTTATACTTAACTTTCAAATAGTCTAATTCAGTCTATGAACTTTGCCTAACACTGAAGTACTTATTAATGACATGTCTATAAATGGACAAGTATTGGGAATTTCAAGTTAGGTGTTGAGTTTTACAAGAAATTTAGGTTATTGACCTTGTTAAATGGTTGTTAAAAGATTTGATGGCAAGAACTATAACAGAGTTAATAAAGGTCTTAAGTGTAAGGACTAAAGTAGGATTTACATATATACGCGTAAAAGGTTTGGAATATGTTTTCAACATTTTAAGACTTGTTTGTCTTGTTTACCTTCAGGTTCTATCCATGAATGGTGCATCATTTTCGAGGACGGTTTCTGAGCGCGATTGGTTAAAAAACTCAGTGAAGATATGGGAATTAGTGAAGAGCTCTCCCATTGTAATGGAGTATGCCAGAACGCTTCAATGTTCAGGTATGTTCAGGAGATAGCTGGATGATAGATATGGTTCTGTTCTGTCTGTAAAGGATGAATAGAAAGAAGCTTGCTGGGTATTATTGGTAATTATTCATTCTACTATATTCTGATTTCAGCCTTCATACATGGTATAGATTTTTCTTTTGAAGTAAAAGGAAATCAGATTAGGGGTGTAATGTTGTATCATTAGACGAGACGGGTTGTTTCGAGGGAGATTTTTAACATTTCCATTGTATCGAAAATTTTCCGATCATATTGATCGGTCTTGGACGTAGGGAACAATGTCGATAAAATGAACTCCAACATCAAGTAGCCATAGATGAAAGGAAATCACCCATTAACTATACGTTACTTTGAGCTTTAGCAGCAAATTGTATGAGTTTAGGATCTCTTTGATATACCATTTTGGTTCTGTTTATTCAACCAAAACCAAGACTCATTTGGC

mRNA sequence

CTAGCTTCAAGTATATAACAATTGCACCCCAATTTGATTATTGACCTAAATAAAATTTAAATAAAGAATGAGATTCATAAATAAAATAAAAATCATTTAAAAAACTCTATTCTTTGTCTTCTTCCTCAAATCTCTCGATTCATTAGTAGCCTCGCTACTAAAACCCCAACCAACCGATCAAACACACAGAGCTGCAAGGTTTGCAACAATGGCGGGTTCTACCACCGGTAACTCCTCTTCCAATTCCTCGCCGACTCCTCCTCCCCCCAAAATCCTTCTGGCAAAGCCCGGCCTCGTCACCGGCGGAGCAATTTCCTCCAAGATTGGACGCGGCGCCGGCGCCGACGATGAAGCAGCTTCGATCCGGTCCCGTCTCCCTTCTCTTGGATCCCTAAATCTTCTCTCCGATTCCTGGGACCTCCACATTGACCGTTTCCTCCCTTTTTTGACTGAGAATATGGAGTTCGTAGTGGTGGGAATAATTGGTCCACCAGGAGTTGGTAAATCGACGATCATGAATGAGATTTACGGATTCGATGGAAGTTCTCCAGGTATGCTACCTCCATTTCCAATACTTACTGAAGATGTTAAAGCAATGGCTAGACATTGTACACTGGGTATTGAGCCTCGAATTTCTTCTGAGAGGATCATACTTCTGGATACTCAGCCTGTGTTCAGTCCTTCTGTTTTAGCTGAAATTATGAGACCTGATGGTTCATCCACCGTTTCAGTTATCAGTGGCGAATCATTATCTGCTGAATTGGCCCATGAACTTATGAATATCCAGCTCGGCATTCTTCTAGCGTCCATTTGCAACATTGTCCTTGTGATATCAGATGGAGTTCACGATCTAAATATGTGGCGTTTAATGTCAACTGTTGACATGCTTAAACATGGCTTGCCCGATCCATCTTCTCCCACTTTTTCTCATCCACAAAACTCTAATGTAGGATCCGAGAAGGAATACAAAGATAAAACTTTTACGAGTGGAGAGTATATGGCAATTCCGATCTTTGTTCATGCGAAAGTGCAAGATGAAGATCTTGTTCCACACAATATCTTGCAGTTGAAGAGAGCATTTACCCACTATTTTAGAACCTCATCATTTATGGGAGCCAAATGTGAAAAAGTCCATAGTGAGCAACTGCTTTCCTCTGTGGTGTCTGATACCGAAAATTTAGATGTAGATGGTGAAGATCGAAGGTTGCTTGTCATCCCAAATCGAAACAAGGACGACTCTACCAGTGGTCAATATGAAAGTTTTAACTTAGCTCTGTGGAAGCTAAGGGATCAGGTTCTATCCATGAATGGTGCATCATTTTCGAGGACGGTTTCTGAGCGCGATTGGTTAAAAAACTCAGTGAAGATATGGGAATTAGTGAAGAGCTCTCCCATTGTAATGGAGTATGCCAGAACGCTTCAATGTTCAGGTATGTTCAGGAGATAGCTGGATGATAGATATGGTTCTGTTCTGTCTGTAAAGGATGAATAGAAAGAAGCTTGCTGGGTATTATTGGTAATTATTCATTCTACTATATTCTGATTTCAGCCTTCATACATGGTATAGATTTTTCTTTTGAAGTAAAAGGAAATCAGATTAGGGGTGTAATGTTGTATCATTAGACGAGACGGGTTGTTTCGAGGGAGATTTTTAACATTTCCATTGTATCGAAAATTTTCCGATCATATTGATCGGTCTTGGACGTAGGGAACAATGTCGATAAAATGAACTCCAACATCAAGTAGCCATAGATGAAAGGAAATCACCCATTAACTATACGTTACTTTGAGCTTTAGCAGCAAATTGTATGAGTTTAGGATCTCTTTGATATACCATTTTGGTTCTGTTTATTCAACCAAAACCAAGACTCATTTGGC

Coding sequence (CDS)

ATGGCGGGTTCTACCACCGGTAACTCCTCTTCCAATTCCTCGCCGACTCCTCCTCCCCCCAAAATCCTTCTGGCAAAGCCCGGCCTCGTCACCGGCGGAGCAATTTCCTCCAAGATTGGACGCGGCGCCGGCGCCGACGATGAAGCAGCTTCGATCCGGTCCCGTCTCCCTTCTCTTGGATCCCTAAATCTTCTCTCCGATTCCTGGGACCTCCACATTGACCGTTTCCTCCCTTTTTTGACTGAGAATATGGAGTTCGTAGTGGTGGGAATAATTGGTCCACCAGGAGTTGGTAAATCGACGATCATGAATGAGATTTACGGATTCGATGGAAGTTCTCCAGGTATGCTACCTCCATTTCCAATACTTACTGAAGATGTTAAAGCAATGGCTAGACATTGTACACTGGGTATTGAGCCTCGAATTTCTTCTGAGAGGATCATACTTCTGGATACTCAGCCTGTGTTCAGTCCTTCTGTTTTAGCTGAAATTATGAGACCTGATGGTTCATCCACCGTTTCAGTTATCAGTGGCGAATCATTATCTGCTGAATTGGCCCATGAACTTATGAATATCCAGCTCGGCATTCTTCTAGCGTCCATTTGCAACATTGTCCTTGTGATATCAGATGGAGTTCACGATCTAAATATGTGGCGTTTAATGTCAACTGTTGACATGCTTAAACATGGCTTGCCCGATCCATCTTCTCCCACTTTTTCTCATCCACAAAACTCTAATGTAGGATCCGAGAAGGAATACAAAGATAAAACTTTTACGAGTGGAGAGTATATGGCAATTCCGATCTTTGTTCATGCGAAAGTGCAAGATGAAGATCTTGTTCCACACAATATCTTGCAGTTGAAGAGAGCATTTACCCACTATTTTAGAACCTCATCATTTATGGGAGCCAAATGTGAAAAAGTCCATAGTGAGCAACTGCTTTCCTCTGTGGTGTCTGATACCGAAAATTTAGATGTAGATGGTGAAGATCGAAGGTTGCTTGTCATCCCAAATCGAAACAAGGACGACTCTACCAGTGGTCAATATGAAAGTTTTAACTTAGCTCTGTGGAAGCTAAGGGATCAGGTTCTATCCATGAATGGTGCATCATTTTCGAGGACGGTTTCTGAGCGCGATTGGTTAAAAAACTCAGTGAAGATATGGGAATTAGTGAAGAGCTCTCCCATTGTAATGGAGTATGCCAGAACGCTTCAATGTTCAGGTATGTTCAGGAGATAG

Protein sequence

MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLGSLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPFPILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGESLSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFSHPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSFMGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLRDQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR

Homology

[Close]

BLAST of Sed0002742 vs. NCBI nr
Match: XP_038900327.1 (protein SMG9-like isoform X1 [Benincasa hispida])

HSP 1 Score: 736.1 bits (1899), Expect = 1.7e-208
Identity = 373/412 (90.53%), Postives = 388/412 (94.17%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST  NSSSN SP PPPPKILLAKPGLVTGG I+SKIGRG GADDEAASIRSRLPSLG
Sbjct: 1   MAGSTGANSSSNPSPAPPPPKILLAKPGLVTGGPINSKIGRGTGADDEAASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWDLHIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYG+DGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSST+SVISGE 
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTISVISGEP 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
           LSAELAHELM+IQLGILLASICNIVLVIS+GVHDLNMW+LM TVD+LKHGLPDPSSP  S
Sbjct: 181 LSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWQLMLTVDLLKHGLPDPSSPISS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           HPQNSN+GSEKEYK+KT +S +YMA PIFVHAKVQD DLVPHNILQLKRAF +YF+TSSF
Sbjct: 241 HPQNSNIGSEKEYKEKTSSSEDYMATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSF 300

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLR 360
           MG K EKVHSEQLLSSVV DT NLDVDGEDRRLLVIPNRNKDDST GQYESFNLALWKLR
Sbjct: 301 MGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLVIPNRNKDDSTRGQYESFNLALWKLR 360

Query: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           DQVLSMNGASFSRTVSERDWLKNSVKIWE VKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQSSGMFRR 412

[Close]

BLAST of Sed0002742 vs. NCBI nr
Match: XP_022935704.1 (protein SMG9-like [Cucurbita moschata])

HSP 1 Score: 726.9 bits (1875), Expect = 1.0e-205
Identity = 372/412 (90.29%), Postives = 385/412 (93.45%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST GN+SSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDE+ASIRSRLPSLG
Sbjct: 1   MAGSTGGNASSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDESASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWD HIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDFHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSST+SVISGES
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTISVISGES 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
           LSAELAHELM+IQLGILLASICNIVLVIS+G HDLNMWRLM TVD+LKHGLPDPSS  FS
Sbjct: 181 LSAELAHELMSIQLGILLASICNIVLVISEGAHDLNMWRLMLTVDLLKHGLPDPSSSVFS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H QNSNVGSEKE+KDK   S EYMA PIFVHAKV+D DLVPHNILQLKRAF  +F+TSSF
Sbjct: 241 HTQNSNVGSEKEHKDKVSASEEYMATPIFVHAKVEDPDLVPHNILQLKRAFAQFFKTSSF 300

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLR 360
           MG   +KV SEQLLSSVV DT NLDVDGEDRRLL IPNRNKDDST GQYESFNLALWKLR
Sbjct: 301 MG---DKVQSEQLLSSVVPDTRNLDVDGEDRRLLFIPNRNKDDSTRGQYESFNLALWKLR 360

Query: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           DQVLSMNG SFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 DQVLSMNGTSFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQSSGMFRR 409

[Close]

BLAST of Sed0002742 vs. NCBI nr
Match: XP_023540786.1 (protein SMG9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 726.1 bits (1873), Expect = 1.7e-205
Identity = 372/414 (89.86%), Postives = 385/414 (93.00%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST GN+SSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDE+ASIRSRLPSLG
Sbjct: 1   MAGSTGGNASSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDESASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWD HIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDFHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSST+SVISGES
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTISVISGES 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
           LSAELAHELM+IQLGILLASICNIVLVIS+G HDLNMWRLM TVD+LKHGLPDPSS  FS
Sbjct: 181 LSAELAHELMSIQLGILLASICNIVLVISEGAHDLNMWRLMLTVDLLKHGLPDPSSSVFS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H QNSNVGSEKE+KDK   S EYMA PIFVHAKV+D DLVPHNILQLKRAF   F+T+SF
Sbjct: 241 HTQNSNVGSEKEHKDKVSASEEYMATPIFVHAKVEDPDLVPHNILQLKRAFAQCFKTASF 300

Query: 301 MG--AKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWK 360
           MG   K +KV SEQLLSSVV DT NLDVDGEDRRLL IPNRNKDDST GQYESFNLALWK
Sbjct: 301 MGDKVKSDKVQSEQLLSSVVPDTRNLDVDGEDRRLLFIPNRNKDDSTRGQYESFNLALWK 360

Query: 361 LRDQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           LRDQVLSMNG SFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 LRDQVLSMNGTSFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQSSGMFRR 414

[Close]

BLAST of Sed0002742 vs. NCBI nr
Match: KAA0052137.1 (protein SMG9-like isoform X1 [Cucumis melo var. makuwa] >TYK05104.1 protein SMG9-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 725.3 bits (1871), Expect = 2.9e-205
Identity = 370/412 (89.81%), Postives = 383/412 (92.96%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST  NSSSNSSP PPPPKILLAKPGLV GG ISSKIGRG GADDEAASIRSRLPSLG
Sbjct: 1   MAGSTGANSSSNSSPAPPPPKILLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWDLHIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYG+DGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVI+GES
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGES 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
           LSAELAHELM+IQLGILLASICNIVLVIS+GVHDLNMW LM TVD+LKHGLPDPSSP  S
Sbjct: 181 LSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPISS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H QNSNV SEKEYK+KT TS EY+A PIFVHAKVQD DLVPHNILQLKRAF +YF+TSSF
Sbjct: 241 HAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSF 300

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLR 360
           MG K EKVHSEQLLSSV  DT NLDVDGEDRRLL+IPNRNKDDST GQYESFNLALWKLR
Sbjct: 301 MGDKFEKVHSEQLLSSVFPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFNLALWKLR 360

Query: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           DQVLSM GASF RTVSERDWLKNS+KIWE VKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 DQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQSSGMFRR 412

[Close]

BLAST of Sed0002742 vs. NCBI nr
Match: XP_008439030.1 (PREDICTED: protein SMG9-like isoform X1 [Cucumis melo])

HSP 1 Score: 724.9 bits (1870), Expect = 3.8e-205
Identity = 370/412 (89.81%), Postives = 383/412 (92.96%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST  NSSSNSSP PPPPKILLAKPGLV GG ISSKIGRG GADDEAASIRSRLPSLG
Sbjct: 1   MAGSTGANSSSNSSPAPPPPKILLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWDLHIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYG+DGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVI+GES
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGES 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
           LSAELAHELM+IQLGILLASICNIVLVIS+GVHDLNMW LM TVD+LKHGLPDPSSP  S
Sbjct: 181 LSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPISS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H QNSNV SEKEYK+KT TS EY+A PIFVHAKVQD DLVPHNILQLKRAF +YF+TSSF
Sbjct: 241 HAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSF 300

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLR 360
           MG K EKVHSEQLLSSVV DT NLDVDGEDRRLL+IPNRNKDDST GQYESF LALWKLR
Sbjct: 301 MGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFKLALWKLR 360

Query: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           DQVLSM GASF RTVSERDWLKNS+KIWE VKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 DQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQSSGMFRR 412

[Close]

BLAST of Sed0002742 vs. ExPASy Swiss-Prot
Match: B5DDX6 (Protein SMG9 OS=Xenopus tropicalis OX=8364 GN=smg9 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.2e-28
Identity = 116/418 (27.75%), Postives = 192/418 (45.93%), Query Frame = 0


Query: 16  TPPPPKIL--LAKPGLVTGGAISSKIGRGAGADDEAASIRSRL-PSLGSLNLLS------ 75
           T PPP  +  + K G      +     RG GA   AAS    + P +G   LL       
Sbjct: 112 TAPPPTAVAKVEKEGQRPTQPVYQIQNRGMGA---AASASGNVDPVVGQAKLLPPQKMKH 171

Query: 76  -----DSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPFP 135
                D +    D  + FL +  + +VVGI+G  G GKST+M+ +             F 
Sbjct: 172 SIKLVDEYMNWCDSAIEFLLDQTDVLVVGILGLQGTGKSTLMSLLSANSPDDDQRSYVFR 231

Query: 136 ILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGESL 195
           + +++V+  A + T GI+  IS ERII LDTQP+ SP++L  ++  D       +  E  
Sbjct: 232 MQSQEVRERAGNQTSGIDFFISQERIIFLDTQPILSPAILDHLINNDRK-----LPPEYN 291

Query: 196 SAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFSH 255
                 E+ ++Q+   L ++C++V+V+ D   D N++R + T +MLK     PS+P+ SH
Sbjct: 292 LPHTYVEMQSLQIAAFLFTVCHVVIVVQDWFTDFNLYRFLQTAEMLK-----PSTPSPSH 351

Query: 256 PQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLK--------RAFTH 315
             + + GS++          EY    +FV  K + ED  P  + Q+          +   
Sbjct: 352 ESSGSSGSDEGI--------EYYPHVVFVQNKAKREDYCPRTLKQMHTVIDKLMLHSHLR 411

Query: 316 YFRTSS------FMGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSG 375
           Y  T S      F G   + + SE  L  + +   ++D          IP  +   +  G
Sbjct: 412 YKGTLSMLDCNIFPGLPYDFIESEVNLFLIPTMESDVDETISRAGTSGIPLFSLLPAYKG 471

Query: 376 QYESFNLALWKLRDQVLSMNGASFSRTV-SERDWLKNSVKIWELVKSSPIVMEYARTL 405
            + SF+  + +LR Q++SM+    S T+ +E++W   + +IW+ VK S  + EY+R L
Sbjct: 472 -HPSFHSLISRLRSQIMSMSRPQLSHTILTEKNWFHYAARIWDGVKKSSALSEYSRLL 507

[Close]

BLAST of Sed0002742 vs. ExPASy Swiss-Prot
Match: Q05AW9 (Protein SMG9 OS=Xenopus laevis OX=8355 GN=smg9 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.6e-28
Identity = 100/355 (28.17%), Postives = 170/355 (47.89%), Query Frame = 0


Query: 65  LSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPFPILT 124
           L D +    D  + FL +  + +VVG++G  G GKST+M+ +             F + +
Sbjct: 172 LVDEYMNWCDSAIEFLLDQTDVLVVGVLGLQGTGKSTLMSLLSANSPDDDQRSYVFRMQS 231

Query: 125 EDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGESLSAE 184
           ++V+  A + T GI+  IS ERII LDTQP+ SP++L  ++  D       +  E     
Sbjct: 232 QEVRERAGNQTSGIDFFISQERIIFLDTQPILSPAILDHLINNDRK-----LPPEYNLPH 291

Query: 185 LAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFSHPQN 244
              E+ ++Q+   L ++C++V+V+ D   D N++R + T +MLK     PS+P+ SH  +
Sbjct: 292 TYVEMQSLQIAAFLFTVCHVVIVVQDWFTDFNLYRFLQTAEMLK-----PSTPSPSHESS 351

Query: 245 SNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLK--------RAFTHYFR 304
            + GS++          EY    +FV  K + ED  P  + Q+          +   Y  
Sbjct: 352 GSSGSDEGI--------EYYPHIVFVQNKSKREDFCPRTLKQMHTVMDKLMLHSHLRYKG 411

Query: 305 TSS------FMGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYE 364
           T S      F G   + V SE  L  + +   + D          IP  +   +  G + 
Sbjct: 412 TLSMLDCNIFPGLPYDFVESEVNLFLIPTMESDADETISRAGTSGIPLFSLLPAYKG-HP 471

Query: 365 SFNLALWKLRDQVLSMNGASFSRTV-SERDWLKNSVKIWELVKSSPIVMEYARTL 405
           SF+  + +LR Q++SM+    S T+ +E++W   + +IW+ VK S  + EY+R L
Sbjct: 472 SFHSLVSRLRSQIMSMSRPQLSHTILTEKNWFHYAARIWDGVKKSSALSEYSRLL 507

[Close]

BLAST of Sed0002742 vs. ExPASy Swiss-Prot
Match: B5X165 (Protein SMG9 OS=Salmo salar OX=8030 GN=smg9 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.0e-27
Identity = 94/358 (26.26%), Postives = 169/358 (47.21%), Query Frame = 0


Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           S+ L+ D  +   D  + +L +  + +VVG+IG  G GKSTIM+ +             F
Sbjct: 166 SIKLVDDQMN-WCDSAMEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANAPEEDQRGYVF 225

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
              T+++K    + + GI+  I+ ER+I LDTQP+ SPS+L  ++  D       +  E 
Sbjct: 226 RAQTQEIKERGGNQSTGIDFYITQERVIFLDTQPILSPSILDHLINNDRK-----LPPEY 285

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
                  E+ ++Q+   L ++C++V+VI D   D+N++R + T +MLK     PS+P+ S
Sbjct: 286 NLPHTYVEMQSLQITAFLFTVCHVVIVIQDWFTDINLYRFLQTAEMLK-----PSTPSAS 345

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H    + G+E+          EY    +F+  K   ++  P N+ ++  A       S  
Sbjct: 346 HDSTGSSGNEE--------GSEYYPHIVFLQNKSSRDEFCPRNLKKMHMAVDKLMAHSHL 405

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDST---SGQ--------- 360
                  +    +   +  D + L+ +     L ++ N  +D  T   SG          
Sbjct: 406 KYKGTLSMLDCNIFPGL--DRDYLETEVNMFLLPLMENEGEDALTKAGSGSAPLFSLLPG 465

Query: 361 ---YESFNLALWKLRDQVLSMNGASFSRTV-SERDWLKNSVKIWELVKSSPIVMEYAR 403
              + +F+  + KLR Q+L+M+    S T+ +E++W   + +IW+ VK S  + EY+R
Sbjct: 466 YRGHPTFSSQVSKLRSQILAMSRCQLSHTILTEKNWFHYAARIWDGVKKSSALSEYSR 502

[Close]

BLAST of Sed0002742 vs. ExPASy Swiss-Prot
Match: Q2YDD2 (Protein SMG9 OS=Bos taurus OX=9913 GN=SMG9 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.3e-26
Identity = 113/435 (25.98%), Postives = 191/435 (43.91%), Query Frame = 0


Query: 4   STTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKI----GRGAG-----ADDEAASIRS 63
           + T ++S+     PPPP   +   G   G   +  +     RG G     A D       
Sbjct: 111 AATTSTSTPEGTAPPPPAAPVPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAK 170

Query: 64  RLP---SLGSLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDG 123
            LP      S+ L+ D  +   D  + +L +  + +VVG++G  G GKS +M+ +     
Sbjct: 171 LLPPERMKHSIKLVDDQMN-WCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTP 230

Query: 124 SSPGMLPPFPILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSS 183
                   F   + ++K    + T GI+  I+ ERI+ LDTQP+ SPS+L  ++  D   
Sbjct: 231 EEDQRAYVFRAQSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRK- 290

Query: 184 TVSVISGESLSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGL 243
               +  E        E+ ++Q+   L ++C++V+V+ D   DL+++R + T +M+K   
Sbjct: 291 ----LPPEYNLPHTYVEMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVK--- 350

Query: 244 PDPSSPTFSHPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLK--- 303
             PS+P+ SH  +S+ GSE+          EY    +F+  K + ED  P  + Q+    
Sbjct: 351 --PSTPSPSHESSSSSGSEE--------GAEYYPHLVFLQNKARREDFCPRKLRQMHLMI 410

Query: 304 ---RAFTH--------YFRTSSFMGAKCEKVHSEQLL-------SSVVSDTENLDVDGED 363
               A +H          + + F G   + + SE  L       S   S+T      G  
Sbjct: 411 DQLMAHSHLRYKGTLSMLQCNVFPGLPPDFLDSEVNLFLMPFMDSETESETPPRAGPGSS 470

Query: 364 RRLLVIPNRNKDDSTSGQYESFNLALWKLRDQVLSMNGASFSRTV-SERDWLKNSVKIWE 405
               ++P           + SF   + KLR QV+SM     S T+ +E++W   + +IW+
Sbjct: 471 PLFSLLPGYR-------GHPSFQSLVSKLRSQVMSMARPQLSHTILTEKNWFHYAARIWD 519

[Close]

BLAST of Sed0002742 vs. ExPASy Swiss-Prot
Match: Q9DB90 (Protein SMG9 OS=Mus musculus OX=10090 GN=Smg9 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.1e-25
Identity = 111/435 (25.52%), Postives = 187/435 (42.99%), Query Frame = 0


Query: 3   GSTTGNSSSNSSPTPPPPKILLAKP-GLVTGGAISSKI----GRGAG-----ADDEAASI 62
           G   G  +S    T PPP    A P G   G   +  +     RG G     A D     
Sbjct: 109 GPVAGTGASTPEGTAPPPPTAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPTAMDPVVGQ 168

Query: 63  RSRLP---SLGSLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGF 122
              LP      S+ L+ D  +   D  + +L +  + +VVG++G  G GKS +M+ +   
Sbjct: 169 AKLLPPERMKHSIKLVDDQMN-WCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSAN 228

Query: 123 DGSSPGMLPPFPILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDG 182
                     F   + ++K    + T GI+  I+ ERI+ LDTQP+ SPS+L  ++  D 
Sbjct: 229 TPEEDQRAYVFRAQSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDR 288

Query: 183 SSTVSVISGESLSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKH 242
                 +  E        E+ ++Q+   L ++C++V+V+ D   DL+++R + T +M+K 
Sbjct: 289 K-----LPPEYNLPHTYVEMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVK- 348

Query: 243 GLPDPSSPTFSHPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKR 302
               PS+P+ SH  +S+ GS++          EY    +F+  K + ED  P  + Q+  
Sbjct: 349 ----PSTPSPSHESSSSAGSDE--------GTEYYPHLVFLQNKARREDFCPRKLRQMHL 408

Query: 303 AFTHYFRTSSFMGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIP-------NRNKD 362
                   S         +    +   +  D  + +V+     L ++P       N N  
Sbjct: 409 MIDQLMAHSHLRYKGTLSMLQCNVFPGLPPDFLDAEVN-----LFLVPFMDSEAENENPP 468

Query: 363 DSTSGQ------------YESFNLALWKLRDQVLSMNGASFSRTV-SERDWLKNSVKIWE 405
            +  G             + SF   + KLR QV+SM     S T+ +E++W   + +IW+
Sbjct: 469 RAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSMARPQLSHTILTEKNWFHYAARIWD 519

[Close]

BLAST of Sed0002742 vs. ExPASy TrEMBL
Match: A0A6J1F665 (protein SMG9-like OS=Cucurbita moschata OX=3662 GN=LOC111442489 PE=3 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 4.8e-206
Identity = 372/412 (90.29%), Postives = 385/412 (93.45%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST GN+SSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDE+ASIRSRLPSLG
Sbjct: 1   MAGSTGGNASSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDESASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWD HIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDFHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSST+SVISGES
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTISVISGES 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
           LSAELAHELM+IQLGILLASICNIVLVIS+G HDLNMWRLM TVD+LKHGLPDPSS  FS
Sbjct: 181 LSAELAHELMSIQLGILLASICNIVLVISEGAHDLNMWRLMLTVDLLKHGLPDPSSSVFS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H QNSNVGSEKE+KDK   S EYMA PIFVHAKV+D DLVPHNILQLKRAF  +F+TSSF
Sbjct: 241 HTQNSNVGSEKEHKDKVSASEEYMATPIFVHAKVEDPDLVPHNILQLKRAFAQFFKTSSF 300

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLR 360
           MG   +KV SEQLLSSVV DT NLDVDGEDRRLL IPNRNKDDST GQYESFNLALWKLR
Sbjct: 301 MG---DKVQSEQLLSSVVPDTRNLDVDGEDRRLLFIPNRNKDDSTRGQYESFNLALWKLR 360

Query: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           DQVLSMNG SFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 DQVLSMNGTSFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQSSGMFRR 409

[Close]

BLAST of Sed0002742 vs. ExPASy TrEMBL
Match: A0A5D3C1F3 (Protein SMG9-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00080 PE=3 SV=1)

HSP 1 Score: 725.3 bits (1871), Expect = 1.4e-205
Identity = 370/412 (89.81%), Postives = 383/412 (92.96%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST  NSSSNSSP PPPPKILLAKPGLV GG ISSKIGRG GADDEAASIRSRLPSLG
Sbjct: 1   MAGSTGANSSSNSSPAPPPPKILLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWDLHIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYG+DGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVI+GES
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGES 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
           LSAELAHELM+IQLGILLASICNIVLVIS+GVHDLNMW LM TVD+LKHGLPDPSSP  S
Sbjct: 181 LSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPISS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H QNSNV SEKEYK+KT TS EY+A PIFVHAKVQD DLVPHNILQLKRAF +YF+TSSF
Sbjct: 241 HAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSF 300

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLR 360
           MG K EKVHSEQLLSSV  DT NLDVDGEDRRLL+IPNRNKDDST GQYESFNLALWKLR
Sbjct: 301 MGDKFEKVHSEQLLSSVFPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFNLALWKLR 360

Query: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           DQVLSM GASF RTVSERDWLKNS+KIWE VKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 DQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQSSGMFRR 412

[Close]

BLAST of Sed0002742 vs. ExPASy TrEMBL
Match: A0A0A0L618 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171800 PE=3 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.8e-205
Identity = 371/412 (90.05%), Postives = 383/412 (92.96%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST  NSSSNSSP PPPPKILLAKPGLV GG I+SKIGRGAGADDE ASIRSRLPSLG
Sbjct: 1   MAGSTGANSSSNSSPAPPPPKILLAKPGLVPGGPINSKIGRGAGADDEPASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWDLHIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYG+DGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVI+GES
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGES 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
            SAELAHELM+IQLGILLASICNIVLVIS+GVHDLNMW LM TVD+LKHGLPDPSSP  S
Sbjct: 181 PSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPISS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H QNSNV SEKEYK+KT TS EYMA PIFVHAKVQD DLVP NILQLKRAF +YF+TSSF
Sbjct: 241 HAQNSNVASEKEYKEKTSTSEEYMATPIFVHAKVQDRDLVPQNILQLKRAFAYYFKTSSF 300

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLR 360
           MG K EKVHSEQLLSSVV DT NLDVDGEDRRLL+IPNRNKDDST GQYESFNLALWKLR
Sbjct: 301 MGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFNLALWKLR 360

Query: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           DQVLSMNGASF RTVSERDWLKNSVKIWE VKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 DQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQSSGMFRR 412

[Close]

BLAST of Sed0002742 vs. ExPASy TrEMBL
Match: A0A1S3AYF2 (protein SMG9-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483940 PE=3 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.8e-205
Identity = 370/412 (89.81%), Postives = 383/412 (92.96%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST  NSSSNSSP PPPPKILLAKPGLV GG ISSKIGRG GADDEAASIRSRLPSLG
Sbjct: 1   MAGSTGANSSSNSSPAPPPPKILLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWDLHIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYG+DGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVI+GES
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGES 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
           LSAELAHELM+IQLGILLASICNIVLVIS+GVHDLNMW LM TVD+LKHGLPDPSSP  S
Sbjct: 181 LSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPISS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H QNSNV SEKEYK+KT TS EY+A PIFVHAKVQD DLVPHNILQLKRAF +YF+TSSF
Sbjct: 241 HAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSF 300

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLR 360
           MG K EKVHSEQLLSSVV DT NLDVDGEDRRLL+IPNRNKDDST GQYESF LALWKLR
Sbjct: 301 MGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFKLALWKLR 360

Query: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           DQVLSM GASF RTVSERDWLKNS+KIWE VKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 DQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQSSGMFRR 412

[Close]

BLAST of Sed0002742 vs. ExPASy TrEMBL
Match: A0A6J1I3N3 (protein SMG9-like OS=Cucurbita maxima OX=3661 GN=LOC111470696 PE=3 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.6e-204
Identity = 371/412 (90.05%), Postives = 383/412 (92.96%), Query Frame = 0


Query: 1   MAGSTTGNSSSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDEAASIRSRLPSLG 60
           MAGST GN+SSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDE+ASIRSRLPSLG
Sbjct: 1   MAGSTGGNASSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDESASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPFLTENMEFVVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120
           SLNLLSDSWD HIDRFLPFLTEN EF VVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF
Sbjct: 61  SLNLLSDSWDFHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF 120

Query: 121 PILTEDVKAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVISGES 180
           PIL+EDV+AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSST+SVISGES
Sbjct: 121 PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTISVISGES 180

Query: 181 LSAELAHELMNIQLGILLASICNIVLVISDGVHDLNMWRLMSTVDMLKHGLPDPSSPTFS 240
           LSAELAHELM+IQLGILLASICNIVLVIS+G  DLNMWRLM TVD+LKHGLPDPSS  FS
Sbjct: 181 LSAELAHELMSIQLGILLASICNIVLVISEGAQDLNMWRLMLTVDLLKHGLPDPSSSVFS 240

Query: 241 HPQNSNVGSEKEYKDKTFTSGEYMAIPIFVHAKVQDEDLVPHNILQLKRAFTHYFRTSSF 300
           H QNSNVGSEKE+KDK   S EYMA PIFVHAKV+D DLVPHNILQLKRAF   F+TSSF
Sbjct: 241 HTQNSNVGSEKEHKDKVSASEEYMATPIFVHAKVEDPDLVPHNILQLKRAFAQCFKTSSF 300

Query: 301 MGAKCEKVHSEQLLSSVVSDTENLDVDGEDRRLLVIPNRNKDDSTSGQYESFNLALWKLR 360
           MG   +KV SEQLLSSVV DT NLDVDGEDRRLL IPNRNKDDST GQYESFNLALWKLR
Sbjct: 301 MG---DKVQSEQLLSSVVPDTRNLDVDGEDRRLLFIPNRNKDDSTRGQYESFNLALWKLR 360

Query: 361 DQVLSMNGASFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQCSGMFRR 413
           DQVLSMNG SFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQ SGMFRR
Sbjct: 361 DQVLSMNGTSFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQSSGMFRR 409

The following BLAST results are available for this feature:

BLAST of Sed0002742 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900327.1	1.7e-208	90.53	protein SMG9-like isoform X1 [Benincasa hispida]	[more]
XP_022935704.1	1.0e-205	90.29	protein SMG9-like [Cucurbita moschata]	[more]
XP_023540786.1	1.7e-205	89.86	protein SMG9-like [Cucurbita pepo subsp. pepo]	[more]
KAA0052137.1	2.9e-205	89.81	protein SMG9-like isoform X1 [Cucumis melo var. makuwa] >TYK05104.1 protein SMG9...	[more]
XP_008439030.1	3.8e-205	89.81	PREDICTED: protein SMG9-like isoform X1 [Cucumis melo]	[more]

BLAST of Sed0002742 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B5DDX6	1.2e-28	27.75	Protein SMG9 OS=Xenopus tropicalis OX=8364 GN=smg9 PE=2 SV=1	[more]
Q05AW9	1.6e-28	28.17	Protein SMG9 OS=Xenopus laevis OX=8355 GN=smg9 PE=2 SV=1	[more]
B5X165	3.0e-27	26.26	Protein SMG9 OS=Salmo salar OX=8030 GN=smg9 PE=2 SV=1	[more]
Q2YDD2	7.3e-26	25.98	Protein SMG9 OS=Bos taurus OX=9913 GN=SMG9 PE=2 SV=1	[more]
Q9DB90	2.1e-25	25.52	Protein SMG9 OS=Mus musculus OX=10090 GN=Smg9 PE=1 SV=1	[more]

BLAST of Sed0002742 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F665	4.8e-206	90.29	protein SMG9-like OS=Cucurbita moschata OX=3662 GN=LOC111442489 PE=3 SV=1	[more]
A0A5D3C1F3	1.4e-205	89.81	Protein SMG9-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L618	1.8e-205	90.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171800 PE=3 SV=1	[more]
A0A1S3AYF2	1.8e-205	89.81	protein SMG9-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483940 PE=3 SV=1	[more]
A0A6J1I3N3	1.6e-204	90.05	protein SMG9-like OS=Cucurbita maxima OX=3661 GN=LOC111470696 PE=3 SV=1	[more]

BLAST of Sed0002742 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
IPR039177	Protein SMG9	PANTHER	PTHR14270	UNCHARACTERIZED	coord: 6..412
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 88..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002742.1	Sed0002742.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay