Sed0002628 (gene) Chayote v1

Overview


Name	Sed0002628
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Elongation factor Tu
Location	LG08: 387998 .. 389924 (+)
RNA-Seq Expression	Sed0002628
Synteny	Sed0002628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCACAACCACCCCTAGCCACCCAATTTTCGACCAGTAGCACAGAAACTTCTAGATACCAAAGGTAAGAGACAGCTATGGATAGAAAGAAACCCCCAAAATTAAGGCCAAATTTCATCTTCCCCATTTCTTCAAGATAACAACACTCTCAAAAATCTATCATCTTTCTCCAAATTCCTCTGTCAGAGCTTCAATGGCGGCCGTTCCCTTTTCTTCTAATCTCGTTTTTTCCTCTTCTTCTTCTTCTTCTTCTTCATCGTCTTCCCCATCTACCCTTTTCGCTAAACCCTCCTCTGTTGCAAACCTTTCTTCCCCTTTCTTAAATCCTTCTGTAATTCGCCATTTACCCTTCTCTTCTTCCTCTTCCGCCATTGTTTCCCGTCCCCGTTACTTCACAATCCGCGCCGCTCGTGGGAAATTCGAAAGGAAGAAACCCCATGTCAATATCGGCACCATCGGCCATGTCGACCACGGCAAAACCACGCTTACTGCTGCATTAACCATGGCGTTGAGCAAAGTCCCCAAGAAATACGACGAAATCGATGCCGCCCCCGAAGAGCGGGCTCGAGGTATCACCATCAATACGGCCACGGTCGAATACGAGACGGAGAAACGGCATTACGCTCATGTGGATTGCCCTGGCCATGCTGATTATGTCAAGAACATGATTACTGGTGCGGCTCAGATGGATGGTGCCATTTTGGTTGTTTCGGGTGCCGATGGCCCGATGCCGCAGACGAAGGAGCATATCTTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTCTTAACAAGAAGGATCAGGTTGATGATGAGGAGCTTTTGCAGCTTGTGGAATTGGAGATGAGGGAGTTGCTTTCTTCTTATGAATTTCCAGGTGATGATGTTCCTATTGTTGCTGGTTCTGCTTTGTTAGCTTTAGAAGCTCTAATGGCTAATCCCAATATTGCTAGAGGTGAAAATGAATGGGTGGATAAGATTTTTGAACTTATGGATTCTGTTGATAGTTATATACCTATACCCGAAAGACAAACAGATCTTCCATTTTTGCTGGCTGTTGAAGATGTGTTTTCTATTACCGGTCGTGGTACTGTTGCTACCGGGCGTGTTGAGAGGGGTACGGTTAGAGTCGGAGAGACAGTGGATATTGTGGGATTGAGGGAAACTAGGAACACAACAGTTACAGGGGTGGAGATGTTTCAGAAAATTCTTGATGAGGCTTTGGCTGGAGATAATGTAGGATTGTTGCTTAGAGGTGTTCAAAAGGGTGATATTCAAAGAGGGATGGTTTTATCCAAGCCTGGCACCATAACCCCACACACCAAGTTTCTTGCAGTTGTGTATGTGTTGAAGAAGGAAGAGGGCGGTAGACATTCGCCCTTTTTCGCTGGTTATAGACCGCAATTTTACATGAGGACGACTGATGTCACTGGTAAGGTGACTTCGATTATGAACGATAAGGATGAGGAGTCGAAAATGGTTATGCCGGGAGACCGAGTGAAAATTGTTGTGGAACTGATGGTGCCTGTGGCTTGTGAACAAGGAATGAGGTTTGCCATCAGGGAAGGTGGGAAGACTGTTGGAGCTGGTGTGATTCAATCTATAATCGAGTGAGTGATAGGAAGAAACAACTTAAATTGTGGAAAACCAATTGAAATGTATGTTCTCTACTCCTTTAGGCTAAATTTGAACCAACATCAATGGTTGCTTTTCTTCATTTTGTTCAAATTTCTGGATTCAATGTCATATATTTGTAGTTATCTTGTTGGTTGGCTCAGACATGCCCAGCTGGGCTAGATAATGTTTTTCATGATGGTATATTTGCAGATACCTTTTTTCCCCTTCTTATGCTGCTTAGGTTTGTCGAGGTATTTCAATGAAGAATCTGCATTTATGCATTCTATGATATTCCAAATCAC

mRNA sequence

GTTTCACAACCACCCCTAGCCACCCAATTTTCGACCAGTAGCACAGAAACTTCTAGATACCAAAGGTAAGAGACAGCTATGGATAGAAAGAAACCCCCAAAATTAAGGCCAAATTTCATCTTCCCCATTTCTTCAAGATAACAACACTCTCAAAAATCTATCATCTTTCTCCAAATTCCTCTGTCAGAGCTTCAATGGCGGCCGTTCCCTTTTCTTCTAATCTCGTTTTTTCCTCTTCTTCTTCTTCTTCTTCTTCATCGTCTTCCCCATCTACCCTTTTCGCTAAACCCTCCTCTGTTGCAAACCTTTCTTCCCCTTTCTTAAATCCTTCTGTAATTCGCCATTTACCCTTCTCTTCTTCCTCTTCCGCCATTGTTTCCCGTCCCCGTTACTTCACAATCCGCGCCGCTCGTGGGAAATTCGAAAGGAAGAAACCCCATGTCAATATCGGCACCATCGGCCATGTCGACCACGGCAAAACCACGCTTACTGCTGCATTAACCATGGCGTTGAGCAAAGTCCCCAAGAAATACGACGAAATCGATGCCGCCCCCGAAGAGCGGGCTCGAGGTATCACCATCAATACGGCCACGGTCGAATACGAGACGGAGAAACGGCATTACGCTCATGTGGATTGCCCTGGCCATGCTGATTATGTCAAGAACATGATTACTGGTGCGGCTCAGATGGATGGTGCCATTTTGGTTGTTTCGGGTGCCGATGGCCCGATGCCGCAGACGAAGGAGCATATCTTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTCTTAACAAGAAGGATCAGGTTGATGATGAGGAGCTTTTGCAGCTTGTGGAATTGGAGATGAGGGAGTTGCTTTCTTCTTATGAATTTCCAGGTGATGATGTTCCTATTGTTGCTGGTTCTGCTTTGTTAGCTTTAGAAGCTCTAATGGCTAATCCCAATATTGCTAGAGGTGAAAATGAATGGGTGGATAAGATTTTTGAACTTATGGATTCTGTTGATAGTTATATACCTATACCCGAAAGACAAACAGATCTTCCATTTTTGCTGGCTGTTGAAGATGTGTTTTCTATTACCGGTCGTGGTACTGTTGCTACCGGGCGTGTTGAGAGGGGTACGGTTAGAGTCGGAGAGACAGTGGATATTGTGGGATTGAGGGAAACTAGGAACACAACAGTTACAGGGGTGGAGATGTTTCAGAAAATTCTTGATGAGGCTTTGGCTGGAGATAATGTAGGATTGTTGCTTAGAGGTGTTCAAAAGGGTGATATTCAAAGAGGGATGGTTTTATCCAAGCCTGGCACCATAACCCCACACACCAAGTTTCTTGCAGTTGTGTATGTGTTGAAGAAGGAAGAGGGCGGTAGACATTCGCCCTTTTTCGCTGGTTATAGACCGCAATTTTACATGAGGACGACTGATGTCACTGGTAAGGTGACTTCGATTATGAACGATAAGGATGAGGAGTCGAAAATGGTTATGCCGGGAGACCGAGTGAAAATTGTTGTGGAACTGATGGTGCCTGTGGCTTGTGAACAAGGAATGAGGTTTGCCATCAGGGAAGGTGGGAAGACTGTTGGAGCTGGTGTGATTCAATCTATAATCGAGTGAGTGATAGGAAGAAACAACTTAAATTGTGGAAAACCAATTGAAATGTATGTTCTCTACTCCTTTAGGCTAAATTTGAACCAACATCAATGGTTGCTTTTCTTCATTTTGTTCAAATTTCTGGATTCAATGTCATATATTTGTAGTTATCTTGTTGGTTGGCTCAGACATGCCCAGCTGGGCTAGATAATGTTTTTCATGATGGTATATTTGCAGATACCTTTTTTCCCCTTCTTATGCTGCTTAGGTTTGTCGAGGTATTTCAATGAAGAATCTGCATTTATGCATTCTATGATATTCCAAATCAC

Coding sequence (CDS)

ATGGCGGCCGTTCCCTTTTCTTCTAATCTCGTTTTTTCCTCTTCTTCTTCTTCTTCTTCTTCATCGTCTTCCCCATCTACCCTTTTCGCTAAACCCTCCTCTGTTGCAAACCTTTCTTCCCCTTTCTTAAATCCTTCTGTAATTCGCCATTTACCCTTCTCTTCTTCCTCTTCCGCCATTGTTTCCCGTCCCCGTTACTTCACAATCCGCGCCGCTCGTGGGAAATTCGAAAGGAAGAAACCCCATGTCAATATCGGCACCATCGGCCATGTCGACCACGGCAAAACCACGCTTACTGCTGCATTAACCATGGCGTTGAGCAAAGTCCCCAAGAAATACGACGAAATCGATGCCGCCCCCGAAGAGCGGGCTCGAGGTATCACCATCAATACGGCCACGGTCGAATACGAGACGGAGAAACGGCATTACGCTCATGTGGATTGCCCTGGCCATGCTGATTATGTCAAGAACATGATTACTGGTGCGGCTCAGATGGATGGTGCCATTTTGGTTGTTTCGGGTGCCGATGGCCCGATGCCGCAGACGAAGGAGCATATCTTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTCTTAACAAGAAGGATCAGGTTGATGATGAGGAGCTTTTGCAGCTTGTGGAATTGGAGATGAGGGAGTTGCTTTCTTCTTATGAATTTCCAGGTGATGATGTTCCTATTGTTGCTGGTTCTGCTTTGTTAGCTTTAGAAGCTCTAATGGCTAATCCCAATATTGCTAGAGGTGAAAATGAATGGGTGGATAAGATTTTTGAACTTATGGATTCTGTTGATAGTTATATACCTATACCCGAAAGACAAACAGATCTTCCATTTTTGCTGGCTGTTGAAGATGTGTTTTCTATTACCGGTCGTGGTACTGTTGCTACCGGGCGTGTTGAGAGGGGTACGGTTAGAGTCGGAGAGACAGTGGATATTGTGGGATTGAGGGAAACTAGGAACACAACAGTTACAGGGGTGGAGATGTTTCAGAAAATTCTTGATGAGGCTTTGGCTGGAGATAATGTAGGATTGTTGCTTAGAGGTGTTCAAAAGGGTGATATTCAAAGAGGGATGGTTTTATCCAAGCCTGGCACCATAACCCCACACACCAAGTTTCTTGCAGTTGTGTATGTGTTGAAGAAGGAAGAGGGCGGTAGACATTCGCCCTTTTTCGCTGGTTATAGACCGCAATTTTACATGAGGACGACTGATGTCACTGGTAAGGTGACTTCGATTATGAACGATAAGGATGAGGAGTCGAAAATGGTTATGCCGGGAGACCGAGTGAAAATTGTTGTGGAACTGATGGTGCCTGTGGCTTGTGAACAAGGAATGAGGTTTGCCATCAGGGAAGGTGGGAAGACTGTTGGAGCTGGTGTGATTCAATCTATAATCGAGTGA

Protein sequence

MAAVPFSSNLVFSSSSSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAIVSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDAAPEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGSALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKGDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE

Homology

[Close]

BLAST of Sed0002628 vs. NCBI nr
Match: XP_022135255.1 (elongation factor Tu, chloroplastic [Momordica charantia])

HSP 1 Score: 836.6 bits (2160), Expect = 1.0e-238
Identity = 435/475 (91.58%), Postives = 451/475 (94.95%), Query Frame = 0


Query: 1   MAAVPFSSNLVFSSSSSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAI 60
           +A+   S+ LVF    +S S SS P++LFAKPSS+  LSS FLNPS IR L FSS SSA 
Sbjct: 6   LASASTSTKLVF--PHASPSPSSPPASLFAKPSSIPKLSSSFLNPSSIRPLTFSSGSSAT 65

Query: 61  VSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDAAP 120
           V+RPR FTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDEIDAAP
Sbjct: 66  VARPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAP 125

Query: 121 EERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180
           EERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP
Sbjct: 126 EERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 185

Query: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGS 240
           QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPI+AGS
Sbjct: 186 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIIAGS 245

Query: 241 ALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300
           ALLALEALMAN +IARGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLAVEDVFSITGR
Sbjct: 246 ALLALEALMANQSIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGR 305

Query: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360
           GTVATGRVERGT+RVG+TVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK
Sbjct: 306 GTVATGRVERGTIRVGDTVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 365

Query: 361 GDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420
            DIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS
Sbjct: 366 ADIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 425

Query: 421 IMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           IMNDKDEESKMVMPGDRVK+VVEL++PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 426 IMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478

[Close]

BLAST of Sed0002628 vs. NCBI nr
Match: XP_022933691.1 (elongation factor Tu, chloroplastic-like [Cucurbita moschata] >KAG7021422.1 Elongation factor Tu, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 826.2 bits (2133), Expect = 1.4e-235
Identity = 432/475 (90.95%), Postives = 446/475 (93.89%), Query Frame = 0


Query: 1   MAAVPFSSNLVFSSSSSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAI 60
           MAA+  +S    S+SS  +    SPS   +KPSS+ NLSS FLNPS +R L F+SSSSA 
Sbjct: 1   MAAISLASAST-STSSKLAFPHPSPSPFSSKPSSITNLSSSFLNPSSLRPLTFTSSSSAT 60

Query: 61  VSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDAAP 120
           V R   FTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDEIDAAP
Sbjct: 61  VKRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAP 120

Query: 121 EERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180
           EERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP
Sbjct: 121 EERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180

Query: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGS 240
           QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDVPIVAGS
Sbjct: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGS 240

Query: 241 ALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300
           ALLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR
Sbjct: 241 ALLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300

Query: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360
           GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK
Sbjct: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360

Query: 361 GDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420
            DIQRGMVL+KPGTITPHTKF+AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS
Sbjct: 361 ADIQRGMVLAKPGTITPHTKFVAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420

Query: 421 IMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           IMNDKDEESKMVMPGDRVK+VVEL++PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 IMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0002628 vs. NCBI nr
Match: KAG6587440.1 (Elongation factor Tu, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 825.1 bits (2130), Expect = 3.1e-235
Identity = 432/475 (90.95%), Postives = 445/475 (93.68%), Query Frame = 0


Query: 1   MAAVPFSSNLVFSSSSSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAI 60
           MAA+  +S    S+SS       SPS   +KPSS+ NLSS FLNPS +R L F+SSSSA 
Sbjct: 1   MAAISLASAST-STSSKLVFPHPSPSPFSSKPSSITNLSSSFLNPSSLRPLTFTSSSSAT 60

Query: 61  VSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDAAP 120
           V R   FTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDEIDAAP
Sbjct: 61  VKRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAP 120

Query: 121 EERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180
           EERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP
Sbjct: 121 EERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180

Query: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGS 240
           QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDVPIVAGS
Sbjct: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGS 240

Query: 241 ALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300
           ALLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR
Sbjct: 241 ALLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300

Query: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360
           GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK
Sbjct: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360

Query: 361 GDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420
            DIQRGMVL+KPGTITPHTKF+AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS
Sbjct: 361 ADIQRGMVLAKPGTITPHTKFVAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420

Query: 421 IMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           IMNDKDEESKMVMPGDRVK+VVEL++PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 IMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0002628 vs. NCBI nr
Match: XP_004138088.2 (elongation factor Tu, chloroplastic [Cucumis sativus] >KAE8652395.1 hypothetical protein Csa_014228 [Cucumis sativus])

HSP 1 Score: 824.7 bits (2129), Expect = 4.1e-235
Identity = 440/482 (91.29%), Postives = 451/482 (93.57%), Query Frame = 0


Query: 1   MAAVPFSSNLVF-------SSSSSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPF 60
           +A+V  SS LVF       SS SSSSSSSS  STLF+KPSS  NLSS FLN S IR L F
Sbjct: 6   LASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSS--NLSSSFLNSSSIRPLSF 65

Query: 61  SSSSSAIVSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKY 120
           SS S   VSRPR  TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKY
Sbjct: 66  SSPS---VSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY 125

Query: 121 DEIDAAPEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180
           DEIDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVS
Sbjct: 126 DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 185

Query: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDD 240
           GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDD
Sbjct: 186 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDD 245

Query: 241 VPIVAGSALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVED 300
           VPI+AGSALLALEALMAN NIARGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLAVED
Sbjct: 246 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 305

Query: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360
           VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL
Sbjct: 306 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 365

Query: 361 LLRGVQKGDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420
           LLRGVQK DIQRGMVL+KPGTITPHTKF AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD
Sbjct: 366 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 425

Query: 421 VTGKVTSIMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSI 476
           VTGKV+SIMNDKDEESKMVMPGDRVK+VVEL++PVACEQGMRFAIREGGKTVGAGVIQSI
Sbjct: 426 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 482

[Close]

BLAST of Sed0002628 vs. NCBI nr
Match: XP_023004504.1 (elongation factor Tu, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 823.5 bits (2126), Expect = 9.1e-235
Identity = 430/475 (90.53%), Postives = 445/475 (93.68%), Query Frame = 0


Query: 1   MAAVPFSSNLVFSSSSSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAI 60
           MAA+  +S    S+SS  +    SPS   +KPSS+  LSS FLNPS +R L F+SSSS+ 
Sbjct: 1   MAAISLASAST-STSSKLAFPHPSPSPFSSKPSSITKLSSSFLNPSSLRPLTFTSSSSST 60

Query: 61  VSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDAAP 120
           V R   FTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDEIDAAP
Sbjct: 61  VKRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAP 120

Query: 121 EERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180
           EERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP
Sbjct: 121 EERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180

Query: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGS 240
           QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDVPIVAGS
Sbjct: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGS 240

Query: 241 ALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300
           ALLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR
Sbjct: 241 ALLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300

Query: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360
           GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK
Sbjct: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360

Query: 361 GDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420
            DIQRGMVL+KPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS
Sbjct: 361 ADIQRGMVLAKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420

Query: 421 IMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           IMNDKDEESKMVMPGDRVK++VEL++PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 IMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0002628 vs. ExPASy Swiss-Prot
Match: P46280 (Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFB1 PE=3 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 6.6e-220
Identity = 390/462 (84.42%), Postives = 428/462 (92.64%), Query Frame = 0


Query: 20  SSSSSPSTLFAK--PSSVANLSSPFLNPSVIRHLPFSSSSSAIVSRPRYFTIRAARGKFE 79
           S S S + LF K    S  +LSS F++P+ I HL  ++++    +R R FT+RAARGKFE
Sbjct: 22  SPSPSSNYLFLKTHKPSATHLSSSFIHPTTILHLAAANTT----TRRRSFTVRAARGKFE 81

Query: 80  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKV----PKKYDEIDAAPEERARGITINTAT 139
           RKKPHVNIGTIGHVDHGKTTLTAALTMAL+ +    PKKYDEIDAAPEERARGITINTAT
Sbjct: 82  RKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITINTAT 141

Query: 140 VEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVG 199
           VEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVG
Sbjct: 142 VEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVG 201

Query: 200 VPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGSALLALEALMANPN 259
           VPN+VVFLNK+DQVDDEELLQLVELE+RELLS YEFPGDDVPI++GSALL+LEALMANP+
Sbjct: 202 VPNIVVFLNKQDQVDDEELLQLVELEVRELLSKYEFPGDDVPIISGSALLSLEALMANPS 261

Query: 260 IARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGRVERGTV 319
           I RGEN+WVDKI+ELM++VD YIPIP+RQT+LPFLLA+EDVF+ITGRGTVATGRVERGT+
Sbjct: 262 IKRGENQWVDKIYELMEAVDDYIPIPQRQTELPFLLAIEDVFTITGRGTVATGRVERGTI 321

Query: 320 RVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKGDIQRGMVLSKPG 379
           RVGETVDIVG+++TRNTTVTGVEMFQKILDEALAGDNVGLLLRG+QK DIQRGMVL+KPG
Sbjct: 322 RVGETVDIVGVKDTRNTTVTGVEMFQKILDEALAGDNVGLLLRGIQKTDIQRGMVLAKPG 381

Query: 380 TITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVM 439
           TITPHTKF A+VYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTGKVT IMNDKDEESKMVM
Sbjct: 382 TITPHTKFSAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIMNDKDEESKMVM 441

Query: 440 PGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           PGDRVK+VVEL+VPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 442 PGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479

[Close]

BLAST of Sed0002628 vs. ExPASy Swiss-Prot
Match: Q43467 (Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFA PE=3 SV=1)

HSP 1 Score: 760.4 bits (1962), Expect = 1.2e-218
Identity = 399/480 (83.12%), Postives = 433/480 (90.21%), Query Frame = 0


Query: 2   AAVPFSSNLVFSSSSSSSSSSSSP-STLFAKPSSVANLSSPFLNP-SVIRHLPFSSSSSA 61
           +A   S  ++   +SSSSS +S+P  +       +  LSS FL+P +V+R  P S+++  
Sbjct: 5   SATASSKLILLPHASSSSSLNSTPFRSSTTNTHKLTPLSSSFLHPTTVLRRTPSSTTTPR 64

Query: 62  IVSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKVPKKYDE 121
                R FT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    +  PKKYDE
Sbjct: 65  -----RTFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDE 124

Query: 122 IDAAPEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 181
           IDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA
Sbjct: 125 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 184

Query: 182 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP 241
           DGPMPQTKEHI+LAKQVGVPNMVVFLNK+DQVDDEELLQLVE+E+R+LLSSYEFPGDD P
Sbjct: 185 DGPMPQTKEHIILAKQVGVPNMVVFLNKQDQVDDEELLQLVEIEVRDLLSSYEFPGDDTP 244

Query: 242 IVAGSALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVF 301
           IV+GSALLALEALMANP I RG+NEWVDKIF+LMD VD+YIPIP+RQTDLPFLLAVEDVF
Sbjct: 245 IVSGSALLALEALMANPAIKRGDNEWVDKIFQLMDEVDNYIPIPQRQTDLPFLLAVEDVF 304

Query: 302 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 361
           SITGRGTVATGRVERGT++VGETVD+VGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL
Sbjct: 305 SITGRGTVATGRVERGTIKVGETVDLVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 364

Query: 362 RGVQKGDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 421
           RGVQK DIQRGMVL+KPGTITPHTKF A+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT
Sbjct: 365 RGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 424

Query: 422 GKVTSIMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           GKVTSIMNDKDEES MV+PGDRVK+VVEL+VPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 425 GKVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479

[Close]

BLAST of Sed0002628 vs. ExPASy Swiss-Prot
Match: Q43364 (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFB PE=2 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 3.4e-216
Identity = 392/480 (81.67%), Postives = 433/480 (90.21%), Query Frame = 0


Query: 2   AAVPFSSNLVFSSSSSSSSSSSSPSTLFAKPSSVANLSSPFL-NPSVI-RHLPFSSSSSA 61
           A    S+ L +  S SSSSSSS+ + +F   SS   LSS F   PS +  H P ++ S+ 
Sbjct: 9   ATATASTKLAYPYSPSSSSSSSNTAAVFPSNSSKLILSSSFTPTPSTLFLHSPTTTPST- 68

Query: 62  IVSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKV----PKKYDE 121
             + PR FT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL+ +    PKKYDE
Sbjct: 69  --THPRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDE 128

Query: 122 IDAAPEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 181
           IDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA
Sbjct: 129 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 188

Query: 182 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP 241
           DGPMPQTKEHILLAKQVGVPNMVVFLNK+DQVDDEELL+LVELE+RELLSSYEFPGD++P
Sbjct: 189 DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLELVELEVRELLSSYEFPGDEIP 248

Query: 242 IVAGSALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVF 301
           I++GSALLALEALMANP+I RGEN+WVDKI++LMD+VD YIPIP+RQT+LPFL+A+EDVF
Sbjct: 249 IISGSALLALEALMANPSIKRGENQWVDKIYQLMDNVDEYIPIPQRQTELPFLMAIEDVF 308

Query: 302 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 361
           SITGRGTVATGRVERGTV+VGE VDIVGL++TRNTTVTGVEMFQKILDEA+AGDNVGLLL
Sbjct: 309 SITGRGTVATGRVERGTVKVGEIVDIVGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLLL 368

Query: 362 RGVQKGDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 421
           RG+QK DIQRGMVL+KPGTITPHTKF A+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT
Sbjct: 369 RGIQKIDIQRGMVLAKPGTITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 428

Query: 422 GKVTSIMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           GKVT IM+DK EESKMVMPGDRV +VVEL++PVACEQGMRFAIREGGKTVGAGVIQ I+E
Sbjct: 429 GKVTVIMSDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKILE 485

[Close]

BLAST of Sed0002628 vs. ExPASy Swiss-Prot
Match: O24310 (Elongation factor Tu, chloroplastic OS=Pisum sativum OX=3888 GN=tufA PE=2 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 5.7e-216
Identity = 386/464 (83.19%), Postives = 423/464 (91.16%), Query Frame = 0


Query: 16  SSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAIVSRPRYFTIRAARGK 75
           ++S+S+S S ST F    ++  LSS FLNPS I HL  S  ++   S P  FT+RAARGK
Sbjct: 27  TASASASVSNSTSFRPKLTLTRLSSSFLNPSTILHLTPSQRTNRPSSSP--FTVRAARGK 86

Query: 76  FERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKVPKKYDEIDAAPEERARGITINT 135
           FERKKPH+NIGTIGHVDHGKTTLTAALTMAL    +  PKKYDEIDAAPEERARGITINT
Sbjct: 87  FERKKPHLNIGTIGHVDHGKTTLTAALTMALACLGNSAPKKYDEIDAAPEERARGITINT 146

Query: 136 ATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQ 195
           ATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQ
Sbjct: 147 ATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQ 206

Query: 196 VGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGSALLALEALMAN 255
           VGVP++VVFLNK+DQVDDEELL+LVELE+RELLSSYEFPGDD+PIV+GSALLALEALMAN
Sbjct: 207 VGVPSVVVFLNKQDQVDDEELLELVELEVRELLSSYEFPGDDIPIVSGSALLALEALMAN 266

Query: 256 PNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGRVERG 315
           P + RG N+WVDKI++LMD VD YIPIP+RQT+LPFLLA+EDVFSIT RGTVATGR+ERG
Sbjct: 267 PTLKRGNNQWVDKIYQLMDEVDKYIPIPQRQTELPFLLAIEDVFSITXRGTVATGRIERG 326

Query: 316 TVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKGDIQRGMVLSK 375
            V+VG+ VD+VGLRETRNTTVTGVEMFQKILD+A+AGDNVGLLLRG+QK DIQRGMVL+K
Sbjct: 327 LVKVGDVVDLVGLRETRNTTVTGVEMFQKILDDAMAGDNVGLLLRGIQKIDIQRGMVLAK 386

Query: 376 PGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKM 435
           PGTITPH+KF A+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKM
Sbjct: 387 PGTITPHSKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKM 446

Query: 436 VMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           VMPGDRVKIVVEL+VPVA EQGMRFAIREGGKTVGAGVI +IIE
Sbjct: 447 VMPGDRVKIVVELIVPVAIEQGMRFAIREGGKTVGAGVIGAIIE 488

[Close]

BLAST of Sed0002628 vs. ExPASy Swiss-Prot
Match: Q40450 (Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFA PE=2 SV=2)

HSP 1 Score: 749.2 bits (1933), Expect = 2.8e-215
Identity = 393/480 (81.88%), Postives = 429/480 (89.38%), Query Frame = 0


Query: 2   AAVPFSSNLVFSSSSSSS--SSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSA 61
           AA   SS  + SS+S++    SS+ PS L    S   N S+ FL      H P + SS+A
Sbjct: 6   AATATSSTKLVSSNSTNPLLPSSTKPSKLILSSSFTPNCSTLFL------HSPATPSSTA 65

Query: 62  IVSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKV----PKKYDE 121
              R R FT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL+ +    PKKYDE
Sbjct: 66  -THRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDE 125

Query: 122 IDAAPEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 181
           IDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILV SGA
Sbjct: 126 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSGA 185

Query: 182 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP 241
           DGPMPQTKEHILLAKQVGVPNMVVFLNK+DQVDDEELLQLVELE+RELLSSYEFPGDD+P
Sbjct: 186 DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIP 245

Query: 242 IVAGSALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVF 301
           I++GSALLALEALMANP+I RGEN+WVDKI+ELMD+VDSYIPIP RQT+LPFL+A+EDVF
Sbjct: 246 IISGSALLALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTELPFLMAIEDVF 305

Query: 302 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 361
           SITGRGTVATGRVERGTVR+G+TVDIVGL++TR+TTVTGVEMFQKILDEA+AGDNVGLLL
Sbjct: 306 SITGRGTVATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGLLL 365

Query: 362 RGVQKGDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 421
           RG+QK DIQRGMVL+KPGTITPHTKF A+VYVLKKEEGGRHSPFF+GYRPQFYMRTTDVT
Sbjct: 366 RGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVT 425

Query: 422 GKVTSIMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           GKVTSI  DK EESKMVMPGDRV +VVEL++PVACEQGMRFAIREGGKTVGAGVIQ IIE
Sbjct: 426 GKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478

[Close]

BLAST of Sed0002628 vs. ExPASy TrEMBL
Match: A0A6J1C0N2 (Elongation factor Tu OS=Momordica charantia OX=3673 GN=LOC111007263 PE=3 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 5.0e-239
Identity = 435/475 (91.58%), Postives = 451/475 (94.95%), Query Frame = 0


Query: 1   MAAVPFSSNLVFSSSSSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAI 60
           +A+   S+ LVF    +S S SS P++LFAKPSS+  LSS FLNPS IR L FSS SSA 
Sbjct: 6   LASASTSTKLVF--PHASPSPSSPPASLFAKPSSIPKLSSSFLNPSSIRPLTFSSGSSAT 65

Query: 61  VSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDAAP 120
           V+RPR FTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDEIDAAP
Sbjct: 66  VARPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAP 125

Query: 121 EERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180
           EERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP
Sbjct: 126 EERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 185

Query: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGS 240
           QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPI+AGS
Sbjct: 186 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIIAGS 245

Query: 241 ALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300
           ALLALEALMAN +IARGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLAVEDVFSITGR
Sbjct: 246 ALLALEALMANQSIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGR 305

Query: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360
           GTVATGRVERGT+RVG+TVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK
Sbjct: 306 GTVATGRVERGTIRVGDTVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 365

Query: 361 GDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420
            DIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS
Sbjct: 366 ADIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 425

Query: 421 IMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           IMNDKDEESKMVMPGDRVK+VVEL++PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 426 IMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478

[Close]

BLAST of Sed0002628 vs. ExPASy TrEMBL
Match: A0A6J1EZS3 (Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111441027 PE=3 SV=1)

HSP 1 Score: 826.2 bits (2133), Expect = 6.8e-236
Identity = 432/475 (90.95%), Postives = 446/475 (93.89%), Query Frame = 0


Query: 1   MAAVPFSSNLVFSSSSSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAI 60
           MAA+  +S    S+SS  +    SPS   +KPSS+ NLSS FLNPS +R L F+SSSSA 
Sbjct: 1   MAAISLASAST-STSSKLAFPHPSPSPFSSKPSSITNLSSSFLNPSSLRPLTFTSSSSAT 60

Query: 61  VSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDAAP 120
           V R   FTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDEIDAAP
Sbjct: 61  VKRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAP 120

Query: 121 EERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180
           EERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP
Sbjct: 121 EERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180

Query: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGS 240
           QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDVPIVAGS
Sbjct: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGS 240

Query: 241 ALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300
           ALLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR
Sbjct: 241 ALLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300

Query: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360
           GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK
Sbjct: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360

Query: 361 GDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420
            DIQRGMVL+KPGTITPHTKF+AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS
Sbjct: 361 ADIQRGMVLAKPGTITPHTKFVAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420

Query: 421 IMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           IMNDKDEESKMVMPGDRVK+VVEL++PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 IMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0002628 vs. ExPASy TrEMBL
Match: A0A6J1KWG0 (Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111497788 PE=3 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 4.4e-235
Identity = 430/475 (90.53%), Postives = 445/475 (93.68%), Query Frame = 0


Query: 1   MAAVPFSSNLVFSSSSSSSSSSSSPSTLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAI 60
           MAA+  +S    S+SS  +    SPS   +KPSS+  LSS FLNPS +R L F+SSSS+ 
Sbjct: 1   MAAISLASAST-STSSKLAFPHPSPSPFSSKPSSITKLSSSFLNPSSLRPLTFTSSSSST 60

Query: 61  VSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDAAP 120
           V R   FTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDEIDAAP
Sbjct: 61  VKRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAP 120

Query: 121 EERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180
           EERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP
Sbjct: 121 EERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180

Query: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGS 240
           QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDVPIVAGS
Sbjct: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGS 240

Query: 241 ALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300
           ALLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR
Sbjct: 241 ALLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300

Query: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360
           GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK
Sbjct: 301 GTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360

Query: 361 GDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420
            DIQRGMVL+KPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS
Sbjct: 361 ADIQRGMVLAKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTS 420

Query: 421 IMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           IMNDKDEESKMVMPGDRVK++VEL++PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 IMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0002628 vs. ExPASy TrEMBL
Match: A0A6J1JDL1 (Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111484851 PE=3 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 1.7e-234
Identity = 434/477 (90.99%), Postives = 449/477 (94.13%), Query Frame = 0


Query: 1   MAAVPFSSNLVFSSSSSSSSSSSSPSTLFAKP--SSVANLSSPFLNPSVIRHLPFSSSSS 60
           +A+   SSNL+F  +S+S SSS S S+LFAKP  SS   LSS FLNPS IR L FSSS+ 
Sbjct: 6   LASASTSSNLLFLHASASPSSSPS-SSLFAKPSSSSAIKLSSSFLNPSSIRPLTFSSSA- 65

Query: 61  AIVSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDA 120
             V+ PR  TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDEIDA
Sbjct: 66  --VNPPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDA 125

Query: 121 APEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 180
           APEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP
Sbjct: 126 APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 185

Query: 181 MPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVA 240
           MPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDVPI+A
Sbjct: 186 MPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIA 245

Query: 241 GSALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSIT 300
           GSALLALEALMANP I RGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLAVEDVFSIT
Sbjct: 246 GSALLALEALMANPGIVRGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSIT 305

Query: 301 GRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGV 360
           GRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGV
Sbjct: 306 GRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGV 365

Query: 361 QKGDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV 420
           QK DIQRGMVL+KPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV
Sbjct: 366 QKADIQRGMVLAKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV 425

Query: 421 TSIMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           TSIMNDKDEESKMVMPGDRVK+VVEL++PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 426 TSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478

[Close]

BLAST of Sed0002628 vs. ExPASy TrEMBL
Match: A0A5A7URR7 (Elongation factor Tu OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001070 PE=3 SV=1)

HSP 1 Score: 818.5 bits (2113), Expect = 1.4e-233
Identity = 437/480 (91.04%), Postives = 450/480 (93.75%), Query Frame = 0


Query: 1   MAAVPFSSNLVF----SSSSSSSSSSSSP-STLFAKPSSVANLSSPFLNPSVIRHLPFSS 60
           +A+V  SS LVF    SS S S SSSSSP S+LF+KPSS  NLSS FLN S IR   FSS
Sbjct: 6   LASVSTSSKLVFPHPSSSPSPSPSSSSSPSSSLFSKPSS--NLSSSFLNSSSIRPFSFSS 65

Query: 61  SSSAIVSRPRYFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDE 120
            S   V+RPR  TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDE
Sbjct: 66  PS---VNRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE 125

Query: 121 IDAAPEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 180
           IDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA
Sbjct: 126 IDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 185

Query: 181 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP 240
           DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDVP
Sbjct: 186 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVP 245

Query: 241 IVAGSALLALEALMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVF 300
           I+AGSALLALEALMAN NIARGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLAVEDVF
Sbjct: 246 IIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF 305

Query: 301 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 360
           SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL
Sbjct: 306 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 365

Query: 361 RGVQKGDIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 420
           RGVQK DIQRGMVL+KPGTITPHTKF AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT
Sbjct: 366 RGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 425

Query: 421 GKVTSIMNDKDEESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           GKV+SIMNDKDEESKMVMPGDRVK+VVEL++PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 426 GKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 480

[Close]

BLAST of Sed0002628 vs. TAIR 10
Match: AT4G20360.1 (RAB GTPase homolog E1B )

HSP 1 Score: 733.0 bits (1891), Expect = 1.5e-211
Identity = 383/468 (81.84%), Postives = 421/468 (89.96%), Query Frame = 0


Query: 13  SSSSSSSSSSSSPS-TLFAKPSSVANLSSPFLNPSVIRHLPFSSSSSAIVSRPRYFTIRA 72
           SSSS    S SSPS +L    S+   L +  L+ S +     +++S++  +R R FT+RA
Sbjct: 10  SSSSRILCSYSSPSPSLCPAISTSGKLKTLTLSSSFLPSYSLTTTSASQSTR-RSFTVRA 69

Query: 73  ARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKVPKKYDEIDAAPEERARGI 132
           ARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    S V KKYDEIDAAPEERARGI
Sbjct: 70  ARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGI 129

Query: 133 TINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHIL 192
           TINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHIL
Sbjct: 130 TINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHIL 189

Query: 193 LAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGSALLALEA 252
           LAKQVGVP+MVVFLNK+DQVDD ELL+LVELE+RELLSSYEF GDD+PI++GSALLA+E 
Sbjct: 190 LAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYEFNGDDIPIISGSALLAVET 249

Query: 253 LMANPNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGR 312
           L  NP + RG+N+WVDKI+ELMD+VD YIPIP+RQT+LPFLLAVEDVFSITGRGTVATGR
Sbjct: 250 LTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGR 309

Query: 313 VERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKGDIQRGM 372
           VERGTV+VGETVD+VGLRETR+ TVTGVEMFQKILDEALAGDNVGLLLRG+QK DIQRGM
Sbjct: 310 VERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGM 369

Query: 373 VLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDE 432
           VL+KPG+ITPHTKF A++YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVT IMNDKDE
Sbjct: 370 VLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIMNDKDE 429

Query: 433 ESKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSIIE 476
           ESKMVMPGDRVKIVVEL+VPVACEQGMRFAIREGGKTVGAGVI +I+E
Sbjct: 430 ESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTILE 476

[Close]

BLAST of Sed0002628 vs. TAIR 10
Match: AT4G02930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 519.2 bits (1336), Expect = 3.4e-147
Identity = 267/406 (65.76%), Postives = 316/406 (77.83%), Query Frame = 0


Query: 76  FERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPK----KYDEIDAAPEERARGITINT 135
           F R KPHVN+GTIGHVDHGKTTLTAA+T  L++  K     +DEID APEE+ RGITI T
Sbjct: 61  FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120

Query: 136 ATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQ 195
           A VEYET KRHYAHVDCPGHADYVKNMITGAAQMDG ILVVSG DGPMPQTKEHILLA+Q
Sbjct: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQ 180

Query: 196 VGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIVAGSALLALEALMAN 255
           VGVP++V FLNK D VDD ELL+LVE+E+RELLS Y+FPGDD+PI+ GSAL AL+    N
Sbjct: 181 VGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQG--TN 240

Query: 256 PNIARGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGRVERG 315
             I R        I +LMD+VD YIP P R  D PFL+ +EDVFSI GRGTVATGR+E+G
Sbjct: 241 DEIGR------QAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQG 300

Query: 316 TVRVGETVDIVGLRE---TRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKGDIQRGMV 375
            ++VGE V+I+GLRE      +TVTGVEMF+KILD   AGDNVGLLLRG+++ DIQRGMV
Sbjct: 301 VIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMV 360

Query: 376 LSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEE 435
           ++KPG+   + KF A +YVL K+EGGRH+ FF+ YRPQFY+RT D+TGKV     +  E 
Sbjct: 361 IAKPGSCKTYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKV-----ELPEN 420

Query: 436 SKMVMPGDRVKIVVELMVPVACEQGMRFAIREGGKTVGAGVIQSII 475
            KMVMPGD V  V EL++PV  E G RFA+REGG+TVGAGV+  ++
Sbjct: 421 VKMVMPGDNVTAVFELIMPVPLETGQRFALREGGRTVGAGVVSKVM 453

[Close]

BLAST of Sed0002628 vs. TAIR 10
Match: AT1G07920.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 166.0 bits (419), Expect = 7.3e-41
Identity = 134/443 (30.25%), Postives = 197/443 (44.47%), Query Frame = 0


Query: 78  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDE-------------------IDA 137
           ++K H+NI  IGHVD GK+T T  L   L  + K+  E                   +D 
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 138 APEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 197
              ER RGITI+ A  ++ET K +   +D PGH D++KNMITG +Q D A+L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 198 MP-------QTKEHILLAKQVGVPNMVVFLNKKDQVD---DEELLQLVELEMRELLSSYE 257
                    QT+EH LLA  +GV  M+   NK D       +     +  E+   L    
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 258 FPGDDVPIVAGSALLALEALMANPNIARGENEWV--DKIFELMDSVDSYIPIPERQTDLP 317
           +  D +P V  S       +  + N+     +W     + E +D ++     P+R +D P
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNL-----DWYKGPTLLEALDQINE----PKRPSDKP 242

Query: 318 FLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEAL 377
             L ++DV+ I G GTV  GRVE G ++ G  V       T  T V  VEM  + L EAL
Sbjct: 243 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT--TEVKSVEMHHESLLEAL 302

Query: 378 AGDNVGLLLRGVQKGDIQRGMVL--SKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYR 437
            GDNVG  ++ V   D++RG V   SK         F + V ++             GY 
Sbjct: 303 PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIM-----NHPGQIGNGYA 362

Query: 438 PQFYMRTTDVTGKVTSIMNDKD--------EESKMVMPGDRVKIVVELMVPVACEQGM-- 474
           P     T+ +  K + I+   D        +E K +  GD   + +    P+  E     
Sbjct: 363 PVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEY 422

[Close]

BLAST of Sed0002628 vs. TAIR 10
Match: AT1G07930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 166.0 bits (419), Expect = 7.3e-41
Identity = 134/443 (30.25%), Postives = 197/443 (44.47%), Query Frame = 0


Query: 78  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDE-------------------IDA 137
           ++K H+NI  IGHVD GK+T T  L   L  + K+  E                   +D 
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 138 APEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 197
              ER RGITI+ A  ++ET K +   +D PGH D++KNMITG +Q D A+L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 198 MP-------QTKEHILLAKQVGVPNMVVFLNKKDQVD---DEELLQLVELEMRELLSSYE 257
                    QT+EH LLA  +GV  M+   NK D       +     +  E+   L    
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 258 FPGDDVPIVAGSALLALEALMANPNIARGENEWV--DKIFELMDSVDSYIPIPERQTDLP 317
           +  D +P V  S       +  + N+     +W     + E +D ++     P+R +D P
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNL-----DWYKGPTLLEALDQINE----PKRPSDKP 242

Query: 318 FLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEAL 377
             L ++DV+ I G GTV  GRVE G ++ G  V       T  T V  VEM  + L EAL
Sbjct: 243 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT--TEVKSVEMHHESLLEAL 302

Query: 378 AGDNVGLLLRGVQKGDIQRGMVL--SKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYR 437
            GDNVG  ++ V   D++RG V   SK         F + V ++             GY 
Sbjct: 303 PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIM-----NHPGQIGNGYA 362

Query: 438 PQFYMRTTDVTGKVTSIMNDKD--------EESKMVMPGDRVKIVVELMVPVACEQGM-- 474
           P     T+ +  K + I+   D        +E K +  GD   + +    P+  E     
Sbjct: 363 PVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEY 422

[Close]

BLAST of Sed0002628 vs. TAIR 10
Match: AT1G07940.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 166.0 bits (419), Expect = 7.3e-41
Identity = 134/443 (30.25%), Postives = 197/443 (44.47%), Query Frame = 0


Query: 78  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDE-------------------IDA 137
           ++K H+NI  IGHVD GK+T T  L   L  + K+  E                   +D 
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 138 APEERARGITINTATVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 197
              ER RGITI+ A  ++ET K +   +D PGH D++KNMITG +Q D A+L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 198 MP-------QTKEHILLAKQVGVPNMVVFLNKKDQVD---DEELLQLVELEMRELLSSYE 257
                    QT+EH LLA  +GV  M+   NK D       +     +  E+   L    
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 258 FPGDDVPIVAGSALLALEALMANPNIARGENEWV--DKIFELMDSVDSYIPIPERQTDLP 317
           +  D +P V  S       +  + N+     +W     + E +D ++     P+R +D P
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNL-----DWYKGPTLLEALDQINE----PKRPSDKP 242

Query: 318 FLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEAL 377
             L ++DV+ I G GTV  GRVE G ++ G  V       T  T V  VEM  + L EAL
Sbjct: 243 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT--TEVKSVEMHHESLLEAL 302

Query: 378 AGDNVGLLLRGVQKGDIQRGMVL--SKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYR 437
            GDNVG  ++ V   D++RG V   SK         F + V ++             GY 
Sbjct: 303 PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIM-----NHPGQIGNGYA 362

Query: 438 PQFYMRTTDVTGKVTSIMNDKD--------EESKMVMPGDRVKIVVELMVPVACEQGM-- 474
           P     T+ +  K + I+   D        +E K +  GD   + +    P+  E     
Sbjct: 363 PVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEY 422

The following BLAST results are available for this feature:

BLAST of Sed0002628 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135255.1	1.0e-238	91.58	elongation factor Tu, chloroplastic [Momordica charantia]	[more]
XP_022933691.1	1.4e-235	90.95	elongation factor Tu, chloroplastic-like [Cucurbita moschata] >KAG7021422.1 Elon...	[more]
KAG6587440.1	3.1e-235	90.95	Elongation factor Tu, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_004138088.2	4.1e-235	91.29	elongation factor Tu, chloroplastic [Cucumis sativus] >KAE8652395.1 hypothetical...	[more]
XP_023004504.1	9.1e-235	90.53	elongation factor Tu, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Sed0002628 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46280	6.6e-220	84.42	Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFB1 PE=3 SV=1	[more]
Q43467	1.2e-218	83.13	Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFA PE=3 SV=1	[more]
Q43364	3.4e-216	81.67	Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFB PE=...	[more]
O24310	5.7e-216	83.19	Elongation factor Tu, chloroplastic OS=Pisum sativum OX=3888 GN=tufA PE=2 SV=1	[more]
Q40450	2.8e-215	81.88	Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFA PE=...	[more]

BLAST of Sed0002628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0N2	5.0e-239	91.58	Elongation factor Tu OS=Momordica charantia OX=3673 GN=LOC111007263 PE=3 SV=1	[more]
A0A6J1EZS3	6.8e-236	90.95	Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111441027 PE=3 SV=1	[more]
A0A6J1KWG0	4.4e-235	90.53	Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111497788 PE=3 SV=1	[more]
A0A6J1JDL1	1.7e-234	90.99	Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111484851 PE=3 SV=1	[more]
A0A5A7URR7	1.4e-233	91.04	Elongation factor Tu OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350...	[more]

BLAST of Sed0002628 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20360.1	1.5e-211	81.84	RAB GTPase homolog E1B	[more]
AT4G02930.1	3.4e-147	65.76	GTP binding Elongation factor Tu family protein	[more]
AT1G07920.1	7.3e-41	30.25	GTP binding Elongation factor Tu family protein	[more]
AT1G07930.1	7.3e-41	30.25	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.1	7.3e-41	30.25	GTP binding Elongation factor Tu family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Translational (tr)-type GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 144..154 score: 63.79 coord: 160..171 score: 66.17 coord: 84..97 score: 76.82 coord: 197..206 score: 51.85 coord: 124..132 score: 70.58
IPR000795	Translational (tr)-type GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 80..277 e-value: 1.2E-54 score: 184.9
IPR000795	Translational (tr)-type GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 80..280 score: 60.417793
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 374..473 e-value: 1.0E-38 score: 131.9
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 282..410 e-value: 8.2E-53 score: 179.7
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 414..474 e-value: 2.6E-22 score: 80.4
None	No IPR available	PANTHER	PTHR43721	ELONGATION FACTOR TU-RELATED	coord: 19..475
None	No IPR available	PANTHER	PTHR43721:SF21	ELONGATION FACTOR TU	coord: 19..475
None	No IPR available	CDD	cd03707	EFTU_III	coord: 376..470 e-value: 1.49436E-53 score: 172.696
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 83..211 e-value: 8.2E-16 score: 56.2
IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle	TIGRFAM	TIGR00485	TIGR00485	coord: 72..475 e-value: 1.5E-220 score: 729.7
IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle	HAMAP	MF_00118_B	EF_Tu_B	coord: 71..475 score: 58.635227
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 72..279 e-value: 1.6E-71 score: 242.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 78..302
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 301..369 e-value: 3.0E-17 score: 62.8
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 117..132
IPR041709	Elongation factor Tu (EF-Tu), GTP-binding domain	CDD	cd01884	EF_Tu	coord: 81..279 e-value: 1.36007E-124 score: 358.82
IPR033720	Elongation factor Tu, domain 2	CDD	cd03697	EFTU_II	coord: 287..373 e-value: 4.56702E-50 score: 163.458
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	SUPERFAMILY	50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 374..474
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 281..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002628.1	Sed0002628.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
biological_process	GO:0070125	mitochondrial translational elongation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003746	translation elongation factor activity