Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGCCTCATTAGCATATAATGTTAGTCCATTCTCCTCGGAAATCAATATCTTCAATTCTTGTAATGGCCTACTCCTATGTTCTACCAACGAACCATCTTTTCGTGGCGTGTTTCGCGATGTAGTTTGCATATTCAATCCCATCACAAATGAGTACATCAGAGTTTTCTACCCGAAAAAAAAGAAAGCATACAGATATTGGCTCGGCTTCGCTCTCAACACAAACCGCTACAAAATTATAAGATACTCCTTTATATACAAGATTGTGAATGGATCATCATCCATGGTGTCCATGAAACTACTAAGGAACGTTCTCGCATTTGAAATCGATTGCTATGGAAAATGGACCCGTGTTGAATGTGATATCAATATTCTACAAGATGAAGGGACTTACTTCAATGGAGCTCTCTATTGGGTTGGAGTAATTACAAAACATCAAGTCCCCCAACCCGTCTATACATTTGCTGTATATCGTTTCGATTTAGAAGATGAGGATCTTGAAGAAATTTCATTTTCCCAGTTTGAGAACCCAAGTGGAGGGCAACCCTTTGGTTGCTTATTGGGGTTCATGAATGACAGTCTTTATCTAACATTTCAATGGCCACTGTGCGGTGATTATCAAGTTTGGAAGATGGAAGAAGATTTTTTATGGATTAAAGTATTTGTTGTTCCTAATCCACTTACAAGTTTGCATGTCTACCAATTAAATTGCCTTCAACTCATCAAAGCTTGTGAAGATGGCCAGATCCTGTGTTTCTTCACATCATCGTCGGATTTAATATTATATGACCCCAAGACCCAGACCATACAAATCTTGACGAACCAACATCAAATTGTGAAAGCTCATTTGGAGCTTTACAAAATGAGCTGCATCAGTTTTGATCCACTCCACCAGATCTTGGAAACAGATCTATGCTAA
mRNA sequence
ATGATTGCCTCATTAGCATATAATGTTAGTCCATTCTCCTCGGAAATCAATATCTTCAATTCTTGTAATGGCCTACTCCTATGTTCTACCAACGAACCATCTTTTCGTGGCGTGTTTCGCGATGTAGTTTGCATATTCAATCCCATCACAAATGAGTACATCAGAGTTTTCTACCCGAAAAAAAAGAAAGCATACAGATATTGGCTCGGCTTCGCTCTCAACACAAACCGCTACAAAATTATAAGATACTCCTTTATATACAAGATTGTGAATGGATCATCATCCATGGTGTCCATGAAACTACTAAGGAACGTTCTCGCATTTGAAATCGATTGCTATGGAAAATGGACCCGTGTTGAATGTGATATCAATATTCTACAAGATGAAGGGACTTACTTCAATGGAGCTCTCTATTGGGTTGGAGTAATTACAAAACATCAAGTCCCCCAACCCGTCTATACATTTGCTGTATATCGTTTCGATTTAGAAGATGAGGATCTTGAAGAAATTTCATTTTCCCAGTTTGAGAACCCAAGTGGAGGGCAACCCTTTGGTTGCTTATTGGGGTTCATGAATGACAGTCTTTATCTAACATTTCAATGGCCACTGTGCGGTGATTATCAAGTTTGGAAGATGGAAGAAGATTTTTTATGGATTAAAGTATTTGTTGTTCCTAATCCACTTACAAGTTTGCATGTCTACCAATTAAATTGCCTTCAACTCATCAAAGCTTGTGAAGATGGCCAGATCCTGTGTTTCTTCACATCATCGTCGGATTTAATATTATATGACCCCAAGACCCAGACCATACAAATCTTGACGAACCAACATCAAATTGTGAAAGCTCATTTGGAGCTTTACAAAATGAGCTGCATCAGTTTTGATCCACTCCACCAGATCTTGGAAACAGATCTATGCTAA
Coding sequence (CDS)
ATGATTGCCTCATTAGCATATAATGTTAGTCCATTCTCCTCGGAAATCAATATCTTCAATTCTTGTAATGGCCTACTCCTATGTTCTACCAACGAACCATCTTTTCGTGGCGTGTTTCGCGATGTAGTTTGCATATTCAATCCCATCACAAATGAGTACATCAGAGTTTTCTACCCGAAAAAAAAGAAAGCATACAGATATTGGCTCGGCTTCGCTCTCAACACAAACCGCTACAAAATTATAAGATACTCCTTTATATACAAGATTGTGAATGGATCATCATCCATGGTGTCCATGAAACTACTAAGGAACGTTCTCGCATTTGAAATCGATTGCTATGGAAAATGGACCCGTGTTGAATGTGATATCAATATTCTACAAGATGAAGGGACTTACTTCAATGGAGCTCTCTATTGGGTTGGAGTAATTACAAAACATCAAGTCCCCCAACCCGTCTATACATTTGCTGTATATCGTTTCGATTTAGAAGATGAGGATCTTGAAGAAATTTCATTTTCCCAGTTTGAGAACCCAAGTGGAGGGCAACCCTTTGGTTGCTTATTGGGGTTCATGAATGACAGTCTTTATCTAACATTTCAATGGCCACTGTGCGGTGATTATCAAGTTTGGAAGATGGAAGAAGATTTTTTATGGATTAAAGTATTTGTTGTTCCTAATCCACTTACAAGTTTGCATGTCTACCAATTAAATTGCCTTCAACTCATCAAAGCTTGTGAAGATGGCCAGATCCTGTGTTTCTTCACATCATCGTCGGATTTAATATTATATGACCCCAAGACCCAGACCATACAAATCTTGACGAACCAACATCAAATTGTGAAAGCTCATTTGGAGCTTTACAAAATGAGCTGCATCAGTTTTGATCCACTCCACCAGATCTTGGAAACAGATCTATGCTAA
Protein sequence
MIASLAYNVSPFSSEINIFNSCNGLLLCSTNEPSFRGVFRDVVCIFNPITNEYIRVFYPKKKKAYRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDCYGKWTRVECDINILQDEGTYFNGALYWVGVITKHQVPQPVYTFAVYRFDLEDEDLEEISFSQFENPSGGQPFGCLLGFMNDSLYLTFQWPLCGDYQVWKMEEDFLWIKVFVVPNPLTSLHVYQLNCLQLIKACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQIVKAHLELYKMSCISFDPLHQILETDLC
Homology
BLAST of Sed0002625 vs. NCBI nr
Match:
XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])
HSP 1 Score: 193.7 bits (491), Expect = 2.3e-45
Identity = 126/314 (40.13%), Postives = 171/314 (54.46%), Query Frame = 0
Query: 2 IASLAY--NVSPFSSEINIFNSCNGLLLCSTNEPSFRGVFRDVVCIFNPITNEYIRVFYP 61
+AS + NVS S +I+I NSC+GL+ + RG VVC+ NP+TNEY ++
Sbjct: 90 VASFTFHPNVSSGSCKISIINSCSGLISLLITKRRRRGHRPGVVCVLNPMTNEYFKLPTF 149
Query: 62 KKK----KAYRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDCYGK 121
+ K K Y Y LGF+ T +YK+ R + V + + + AF C +
Sbjct: 150 RSKGDSVKDYFYGLGFSPRTKQYKLARTHY-----------VCHEFIVEIFAFGTSC--E 209
Query: 122 WTRVECDINILQD-EGTYFNGALYWVGVITKHQVPQPVYTFAVYRFDLEDEDLEEISFSQ 181
WT V L + G YFNG LYWVG Q+P + +YR DLED+ ++ISF
Sbjct: 210 WTPVGSVPYFLNEYHGVYFNGGLYWVG---GQQLPNAGLSDVIYRLDLEDDKFKQISFPL 269
Query: 182 FENPSGGQPFGCLLGFMNDSLYLTFQWPLCGD--YQVWKMEEDFLWIKVFVVPNPLTSLH 241
+ G P+ +G ND+LYLT CGD Y VWKMEEDF WIK FV+ P H
Sbjct: 270 DGDDEGDFPY---IGVYNDTLYLTL---CCGDFEYHVWKMEEDFSWIKEFVLALPENVHH 329
Query: 242 VYQLN-----CLQLIKACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQIVKAHLELY 301
+ CLQLIKACEDG ILC + LILYDPKT+T ++LT+Q +K H+ +Y
Sbjct: 330 SLPRHHPIGYCLQLIKACEDGNILC-LCAGLYLILYDPKTETTELLTDQDFEIKKHMWVY 380
BLAST of Sed0002625 vs. NCBI nr
Match:
XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])
HSP 1 Score: 181.4 bits (459), Expect = 1.2e-41
Identity = 123/313 (39.30%), Postives = 164/313 (52.40%), Query Frame = 0
Query: 2 IASLAY--NVSPFSSEINIFNSCNGLLLCSTNEPSFRGVFRDVVCIFNPITNEYIRVFYP 61
+AS A+ ++S S I I NSC+GL+ N+ RG D+VC+ NPITNEY ++
Sbjct: 90 VASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPITNEYFKLPTS 149
Query: 62 KKK----KAYRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDCYGK 121
+ K Y Y LGF+ TN+YK+ R F + + + ++ AF C +
Sbjct: 150 RSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHD-----------EFIVDIFAFGTSC--E 209
Query: 122 WTRVECDINILQD-EGTYFNGALYWVGVITKHQVPQPVYTFAVYRFDLEDEDLEEISFSQ 181
WT V N L + G Y NG LYWVG YT +YR DL+DE E+ISF
Sbjct: 210 WTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFPL 269
Query: 182 FENPSGGQPFGCLLGFMNDSLYLTFQWPLCG--DYQVWKMEEDFLWIKVFVVPNPLTSLH 241
G P+ + N +LYLTF C DY WKMEEDF W K FV+ P H
Sbjct: 270 ---DGGDDPY---IAVYNGTLYLTF---CCEDFDYHAWKMEEDFSWSKEFVLALPENVHH 329
Query: 242 VYQLN----CLQLIKACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQIVKAHLELYK 301
+ + LQLIK CEDG ILC + LILYDP TQT++ILTNQ +K + +++
Sbjct: 330 SLRHHPIGYYLQLIKFCEDGNILCLYAGIL-LILYDPSTQTVEILTNQDFEIKEAMWVHQ 379
BLAST of Sed0002625 vs. NCBI nr
Match:
XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 177.9 bits (450), Expect = 1.3e-40
Identity = 126/322 (39.13%), Postives = 171/322 (53.11%), Query Frame = 0
Query: 1 MIASLAY--NVSPFSSEINIFNSCNGLLLCSTNEPSFRGVFRDVVCIFNPITNEYIRVFY 60
++AS A+ + SS I I NSC+GL+ + RG RDVVC+ NPITNEY + +
Sbjct: 88 IVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPITNEYFK--H 147
Query: 61 PK------KKKAYRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDC 120
P K Y Y LGF+ TN+YK+ R F + + + ++ AF C
Sbjct: 148 PNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHN-----------EFIVDIFAFGTSC 207
Query: 121 YGKWTRVECDINILQD-EGTYFNGALYWVGVITKHQVPQ---PVYTFAVYRFDLEDEDLE 180
+WT + N L + G YFNG LYWVG ++ Q+P YT VYR DL DE +
Sbjct: 208 --EWTPIGSVPNFLNEYHGVYFNGGLYWVG--SQKQLPNGGLSDYTGVVYRLDLNDEKFK 267
Query: 181 EISFSQFENPSGG-QPFGCLLGFMNDSLYLTFQWPLC---GDYQVWKMEEDFLWIKVFVV 240
+IS P GG +P+ +G N +LYLT LC DY VWKM+EDF W K FV+
Sbjct: 268 KISI-----PFGGDEPY---VGVYNGTLYLT----LCCEDFDYHVWKMKEDFSWSKEFVL 327
Query: 241 PNPLTSLHVYQLN-----CLQLIKACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQI 300
P LH + LQL+K CEDG ILC + LI+YDPKTQ ++ILT+Q
Sbjct: 328 ALPENILHSLHRHHPIGYYLQLVKFCEDGSILC-LCAGILLIVYDPKTQQMEILTDQDFE 379
Query: 301 VKAHLELYKMSCISFDPLHQIL 302
+K + +++ SF+ LH L
Sbjct: 388 IKEGMWFHQIESFSFNSLHNTL 379
BLAST of Sed0002625 vs. NCBI nr
Match:
XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])
HSP 1 Score: 176.4 bits (446), Expect = 3.7e-40
Identity = 116/302 (38.41%), Postives = 158/302 (52.32%), Query Frame = 0
Query: 13 SSEINIFNSCNGLLLC-----STNEPSFRGVFRDVVCIFNPITNEYIRVFYPKKKK---A 72
S+ I+I N CNGLL C +T P + V VCI NP+TNEY + K
Sbjct: 104 STYISIVNFCNGLLCCKFEHRTTKMPPYENV---EVCILNPMTNEYFKPPISNASKDRWY 163
Query: 73 YRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDCYGKWTRVECDIN 132
Y Y GF+ T +YK++R+ + S +L F +C +
Sbjct: 164 YCYRFGFSPKTKQYKLVRFFY---------SCDKAAILLETFTFGTNCKSTYVSCVPSSM 223
Query: 133 ILQDEGTYFNGALYWVGVITKHQVPQPVYTFAVYRFDLEDEDLEEISFSQFENPSGGQPF 192
+++ YFNG+LYW+G KH T +YR D+E E+L+EISF Q SGG
Sbjct: 224 SMEEHSVYFNGSLYWIGKQLKHP------TNVLYRLDIEKEELQEISFPQ----SGG--- 283
Query: 193 GCLLGFMNDSLYLTFQWPLCGDYQVWKMEEDFLWIKVFVVPNPLTSLHVYQL--NCLQLI 252
C +G N SLYLT Y VWKMEEDF W K F V P +H +L + LQLI
Sbjct: 284 CCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQLQLI 343
Query: 253 KACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQIVKAHLELYKMSCISFDPLHQILE 305
+AC+DG+ILC S DLILY+ KTQ ++ LT QH +K +++++ +FD LH+IL
Sbjct: 344 RACDDGKILCLI-SGLDLILYNSKTQRMESLTYQHLNIK---KVHRIDSFNFDSLHKILT 376
BLAST of Sed0002625 vs. NCBI nr
Match:
XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])
HSP 1 Score: 167.2 bits (422), Expect = 2.3e-37
Identity = 114/313 (36.42%), Postives = 162/313 (51.76%), Query Frame = 0
Query: 2 IASLAYNVSPFSSEINIFNSCNGLLLCSTNEPSFRGVFRDVVCIFNPITNEYIRVFYPKK 61
+ S ++ F+S I+I NSCNGLL ++ V+CI NP+TNEY + K
Sbjct: 90 VVSFTFHPKFFTSSISIINSCNGLLSLLISKRKSGSPISYVLCILNPMTNEYFKFPAEKS 149
Query: 62 K------KAYRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDCYGK 121
K + Y Y LGF+ T +YKI R SF+ S S+++ F +
Sbjct: 150 KTHCCCGRPYSYGLGFSPETKQYKIARTSFL-----RDESTTSVEI------FAFGTTRE 209
Query: 122 WTRV-ECDINILQDEGTYFNGALYWVGVITKHQVPQPVYTFAVYRFDLEDEDLEEISFSQ 181
WT V +++D G YFNG LYW T ++ A+YR D+E+E LE+IS
Sbjct: 210 WTPVGVLPSLVVEDHGVYFNGGLYW----TVDELQPRDSNNAIYRLDIENEKLEKISCPH 269
Query: 182 FENPSGGQPFGCLLGFMNDSLYL-TFQWPLCGDYQVWKMEEDFLWIKVFVVPNPLTSLH- 241
+ GG F G + +LYL T+ + YQVWKMEE+ WIK FV+ P H
Sbjct: 270 Y----GGGHF--FFGVFDGTLYLTTYTGTVDNIYQVWKMEENLSWIKAFVLSRPENLRHP 329
Query: 242 ----VYQLNCLQLIKACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQIVKAHLELYK 301
+ ++ LQ IK CEDG+ILC LILYDPKT+ ++ILTNQ + HL +++
Sbjct: 330 EHDQPWGVSQLQPIKVCEDGKILCLLAGFL-LILYDPKTKRVKILTNQDVETERHLHVHQ 380
BLAST of Sed0002625 vs. ExPASy TrEMBL
Match:
A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 5.6e-42
Identity = 123/313 (39.30%), Postives = 164/313 (52.40%), Query Frame = 0
Query: 2 IASLAY--NVSPFSSEINIFNSCNGLLLCSTNEPSFRGVFRDVVCIFNPITNEYIRVFYP 61
+AS A+ ++S S I I NSC+GL+ N+ RG D+VC+ NPITNEY ++
Sbjct: 90 VASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPITNEYFKLPTS 149
Query: 62 KKK----KAYRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDCYGK 121
+ K Y Y LGF+ TN+YK+ R F + + + ++ AF C +
Sbjct: 150 RSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHD-----------EFIVDIFAFGTSC--E 209
Query: 122 WTRVECDINILQD-EGTYFNGALYWVGVITKHQVPQPVYTFAVYRFDLEDEDLEEISFSQ 181
WT V N L + G Y NG LYWVG YT +YR DL+DE E+ISF
Sbjct: 210 WTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFPL 269
Query: 182 FENPSGGQPFGCLLGFMNDSLYLTFQWPLCG--DYQVWKMEEDFLWIKVFVVPNPLTSLH 241
G P+ + N +LYLTF C DY WKMEEDF W K FV+ P H
Sbjct: 270 ---DGGDDPY---IAVYNGTLYLTF---CCEDFDYHAWKMEEDFSWSKEFVLALPENVHH 329
Query: 242 VYQLN----CLQLIKACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQIVKAHLELYK 301
+ + LQLIK CEDG ILC + LILYDP TQT++ILTNQ +K + +++
Sbjct: 330 SLRHHPIGYYLQLIKFCEDGNILCLYAGIL-LILYDPSTQTVEILTNQDFEIKEAMWVHQ 379
BLAST of Sed0002625 vs. ExPASy TrEMBL
Match:
A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)
HSP 1 Score: 177.9 bits (450), Expect = 6.2e-41
Identity = 126/322 (39.13%), Postives = 171/322 (53.11%), Query Frame = 0
Query: 1 MIASLAY--NVSPFSSEINIFNSCNGLLLCSTNEPSFRGVFRDVVCIFNPITNEYIRVFY 60
++AS A+ + SS I I NSC+GL+ + RG RDVVC+ NPITNEY + +
Sbjct: 88 IVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPITNEYFK--H 147
Query: 61 PK------KKKAYRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDC 120
P K Y Y LGF+ TN+YK+ R F + + + ++ AF C
Sbjct: 148 PNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHN-----------EFIVDIFAFGTSC 207
Query: 121 YGKWTRVECDINILQD-EGTYFNGALYWVGVITKHQVPQ---PVYTFAVYRFDLEDEDLE 180
+WT + N L + G YFNG LYWVG ++ Q+P YT VYR DL DE +
Sbjct: 208 --EWTPIGSVPNFLNEYHGVYFNGGLYWVG--SQKQLPNGGLSDYTGVVYRLDLNDEKFK 267
Query: 181 EISFSQFENPSGG-QPFGCLLGFMNDSLYLTFQWPLC---GDYQVWKMEEDFLWIKVFVV 240
+IS P GG +P+ +G N +LYLT LC DY VWKM+EDF W K FV+
Sbjct: 268 KISI-----PFGGDEPY---VGVYNGTLYLT----LCCEDFDYHVWKMKEDFSWSKEFVL 327
Query: 241 PNPLTSLHVYQLN-----CLQLIKACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQI 300
P LH + LQL+K CEDG ILC + LI+YDPKTQ ++ILT+Q
Sbjct: 328 ALPENILHSLHRHHPIGYYLQLVKFCEDGSILC-LCAGILLIVYDPKTQQMEILTDQDFE 379
Query: 301 VKAHLELYKMSCISFDPLHQIL 302
+K + +++ SF+ LH L
Sbjct: 388 IKEGMWFHQIESFSFNSLHNTL 379
BLAST of Sed0002625 vs. ExPASy TrEMBL
Match:
A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)
HSP 1 Score: 177.9 bits (450), Expect = 6.2e-41
Identity = 126/322 (39.13%), Postives = 171/322 (53.11%), Query Frame = 0
Query: 1 MIASLAY--NVSPFSSEINIFNSCNGLLLCSTNEPSFRGVFRDVVCIFNPITNEYIRVFY 60
++AS A+ + SS I I NSC+GL+ + RG RDVVC+ NPITNEY + +
Sbjct: 88 IVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPITNEYFK--H 147
Query: 61 PK------KKKAYRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDC 120
P K Y Y LGF+ TN+YK+ R F + + + ++ AF C
Sbjct: 148 PNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHN-----------EFIVDIFAFGTSC 207
Query: 121 YGKWTRVECDINILQD-EGTYFNGALYWVGVITKHQVPQ---PVYTFAVYRFDLEDEDLE 180
+WT + N L + G YFNG LYWVG ++ Q+P YT VYR DL DE +
Sbjct: 208 --EWTPIGSVPNFLNEYHGVYFNGGLYWVG--SQKQLPNGGLSDYTGVVYRLDLNDEKFK 267
Query: 181 EISFSQFENPSGG-QPFGCLLGFMNDSLYLTFQWPLC---GDYQVWKMEEDFLWIKVFVV 240
+IS P GG +P+ +G N +LYLT LC DY VWKM+EDF W K FV+
Sbjct: 268 KISI-----PFGGDEPY---VGVYNGTLYLT----LCCEDFDYHVWKMKEDFSWSKEFVL 327
Query: 241 PNPLTSLHVYQLN-----CLQLIKACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQI 300
P LH + LQL+K CEDG ILC + LI+YDPKTQ ++ILT+Q
Sbjct: 328 ALPENILHSLHRHHPIGYYLQLVKFCEDGSILC-LCAGILLIVYDPKTQQMEILTDQDFE 379
Query: 301 VKAHLELYKMSCISFDPLHQIL 302
+K + +++ SF+ LH L
Sbjct: 388 IKEGMWFHQIESFSFNSLHNTL 379
BLAST of Sed0002625 vs. ExPASy TrEMBL
Match:
A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)
HSP 1 Score: 176.4 bits (446), Expect = 1.8e-40
Identity = 116/302 (38.41%), Postives = 158/302 (52.32%), Query Frame = 0
Query: 13 SSEINIFNSCNGLLLC-----STNEPSFRGVFRDVVCIFNPITNEYIRVFYPKKKK---A 72
S+ I+I N CNGLL C +T P + V VCI NP+TNEY + K
Sbjct: 104 STYISIVNFCNGLLCCKFEHRTTKMPPYENV---EVCILNPMTNEYFKPPISNASKDRWY 163
Query: 73 YRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDCYGKWTRVECDIN 132
Y Y GF+ T +YK++R+ + S +L F +C +
Sbjct: 164 YCYRFGFSPKTKQYKLVRFFY---------SCDKAAILLETFTFGTNCKSTYVSCVPSSM 223
Query: 133 ILQDEGTYFNGALYWVGVITKHQVPQPVYTFAVYRFDLEDEDLEEISFSQFENPSGGQPF 192
+++ YFNG+LYW+G KH T +YR D+E E+L+EISF Q SGG
Sbjct: 224 SMEEHSVYFNGSLYWIGKQLKHP------TNVLYRLDIEKEELQEISFPQ----SGG--- 283
Query: 193 GCLLGFMNDSLYLTFQWPLCGDYQVWKMEEDFLWIKVFVVPNPLTSLHVYQL--NCLQLI 252
C +G N SLYLT Y VWKMEEDF W K F V P +H +L + LQLI
Sbjct: 284 CCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQLQLI 343
Query: 253 KACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQIVKAHLELYKMSCISFDPLHQILE 305
+AC+DG+ILC S DLILY+ KTQ ++ LT QH +K +++++ +FD LH+IL
Sbjct: 344 RACDDGKILCLI-SGLDLILYNSKTQRMESLTYQHLNIK---KVHRIDSFNFDSLHKILT 376
BLAST of Sed0002625 vs. ExPASy TrEMBL
Match:
A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)
HSP 1 Score: 157.5 bits (397), Expect = 8.7e-35
Identity = 117/307 (38.11%), Postives = 160/307 (52.12%), Query Frame = 0
Query: 10 SPFSSEINIFNSCNGL--LLCSTNEPSFRGVFRDVVCIFNPITNEYIRVFYPKKK----- 69
S SS I+I N+CNGL LL S +P G V+ I NP+TNEY + K K
Sbjct: 97 STSSSSISIINACNGLLSLLISKRKP---GSVSYVLGILNPMTNEYFKFPAEKSKSHCCC 156
Query: 70 -KAYRYWLGFALNTNRYKIIRYSFIYKIVNGSSSMVSMKLLRNVLAFEIDCYGKWTRVE- 129
+ Y Y LGF +YKI R SF + S+++V + AF Y WT V
Sbjct: 157 GRLYSYGLGFNPKKKQYKIARTSF---RPDESTTLV------EIFAFG-STYQVWTSVGF 216
Query: 130 CDINILQDEGTYFNGALYWVGVITKHQVPQPVYTFAVYRFDLEDEDLEEISFSQFENPSG 189
+++D G YFNG LYWV P +YR D+E+E+LE+IS Q G
Sbjct: 217 LPSLVVEDHGVYFNGGLYWV---ANQPDPHDSSISTIYRLDIENENLEKISCPQH---LG 276
Query: 190 GQPFGCLLGFMNDSLYLTFQWPLCGDYQVWKMEEDFLWIKVFVVPNPLTSLH------VY 249
G F G + +LYLT YQVWKM+++F WIK FV+ +P H +
Sbjct: 277 GHFF---FGVFDGTLYLTVS--KNNKYQVWKMKDNFSWIKAFVISSPRNLCHPDHPHQPW 336
Query: 250 QLNCLQLIKACEDGQILCFFTSSSDLILYDPKTQTIQILTNQHQIVKAHLELYKMSCISF 302
++ L IKACEDG+ILC + LILYDPKT++ +ILT+Q V+ HL ++ + +F
Sbjct: 337 GVSQLDPIKACEDGKILCLL-AGLHLILYDPKTKSAEILTDQSVKVEKHLHVHHIDSFNF 378
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038880514.1 | 2.3e-45 | 40.13 | putative F-box protein At1g46984 [Benincasa hispida] | [more] |
| XP_004135796.1 | 1.2e-41 | 39.30 | putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... | [more] |
| XP_008450717.1 | 1.3e-40 | 39.13 | PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ... | [more] |
| XP_022143297.1 | 3.7e-40 | 38.41 | F-box/kelch-repeat protein At3g06240-like [Momordica charantia] | [more] |
| XP_038883771.1 | 2.3e-37 | 36.42 | putative F-box protein At1g60370 [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0M1M5 | 5.6e-42 | 39.30 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... | [more] |
| A0A5D3CIX9 | 6.2e-41 | 39.13 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... | [more] |
| A0A1S3BQV8 | 6.2e-41 | 39.13 | putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV... | [more] |
| A0A6J1CQE2 | 1.8e-40 | 38.41 | F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1... | [more] |
| A0A5D3CM94 | 8.7e-35 | 38.11 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
