Homology
BLAST of Sed0002328 vs. NCBI nr
Match:
YP_009945419.1 (ribosomal protein S4 [Sechium edule] >QIT04135.1 ribosomal protein S4 [Sechium edule] >QOE55949.1 ribosomal protein S4 [Sechium edule])
HSP 1 Score: 392.1 bits (1006), Expect = 2.9e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. NCBI nr
Match:
QJR52958.1 (ribosomal protein S4 [Herpetospermum pedunculosum])
HSP 1 Score: 388.7 bits (997), Expect = 3.2e-104
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIIT KEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITAKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
+KWVSLKINELLVVEYYSRQT
Sbjct: 181 NKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. NCBI nr
Match:
YP_009456148.1 (ribosomal protein S4 [Lagenaria siceraria] >YP_009752498.1 ribosomal protein S4 [Trichosanthes tubiflora] >YP_009753091.1 ribosomal protein S4 [Corallocarpus boehmii] >YP_009753176.1 ribosomal protein S4 [Trichosanthes truncata] >YP_009753260.1 ribosomal protein S4 [Nothoalsomitra suberosa] >YP_009753876.1 ribosomal protein S4 [Trichosanthes lobata] >QNM38533.1 ribosomal protein S4 [Lagenaria siceraria var. microcarpa] >AHM88706.1 ribosomal protein S4 [Lagenaria siceraria] >AHM88765.1 ribosomal protein S4 [Lagenaria siceraria] >AHM88938.1 ribosomal protein S4 [Lagenaria siceraria] >AHM88996.1 ribosomal protein S4 [Lagenaria siceraria])
HSP 1 Score: 388.7 bits (997), Expect = 3.2e-104
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITAKDEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. NCBI nr
Match:
YP_010131096.1 (ribosomal protein S4 [Benincasa hispida] >QPZ75743.1 ribosomal protein S4 [Benincasa hispida] >QSQ72312.1 ribosomal protein S4 [Benincasa hispida])
HSP 1 Score: 387.5 bits (994), Expect = 7.0e-104
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIIT K+EKKSRAL+QNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITAKDEKKSRALMQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. NCBI nr
Match:
QZL38595.1 (ribosomal protein S4 [Citrullus naudinianus])
HSP 1 Score: 387.1 bits (993), Expect = 9.2e-104
Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SI DIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIADIPSYRCKPRDIITAKDEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy Swiss-Prot
Match:
Q4VZH3 (30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 SV=1)
HSP 1 Score: 384.0 bits (985), Expect = 1.0e-105
Identity = 197/201 (98.01%), Postives = 198/201 (98.51%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYR PRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRRPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIIT K+EKKSR LIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy Swiss-Prot
Match:
Q49KZ6 (30S ribosomal protein S4, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps4 PE=3 SV=1)
HSP 1 Score: 363.2 bits (931), Expect = 1.9e-99
Identity = 182/201 (90.55%), Postives = 193/201 (96.02%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRP+ G+DL+NQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
IVDIPSYRCKPRDIIT ++++KSRA+IQNY DSSP +E+PKHLTL P QYKGLVNQIID
Sbjct: 121 CIVDIPSYRCKPRDIITARDDQKSRAMIQNYFDSSPHEEVPKHLTLHPFQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKW+ LKINELLVVEYYSRQT
Sbjct: 181 SKWIGLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy Swiss-Prot
Match:
A6MM38 (30S ribosomal protein S4, chloroplastic OS=Buxus microphylla OX=153571 GN=rps4 PE=3 SV=1)
HSP 1 Score: 362.5 bits (929), Expect = 3.2e-99
Identity = 185/201 (92.04%), Postives = 192/201 (95.52%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRP+ G+DL+NQSRSGK+SQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIP ARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
IVDIPSYRCKPRDIIT K+E+KSRALIQNYLDSSP +ELPKHLTL QYKGLVNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITAKDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWV LKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy Swiss-Prot
Match:
A0A337 (30S ribosomal protein S4, chloroplastic OS=Coffea arabica OX=13443 GN=rps4 PE=3 SV=1)
HSP 1 Score: 359.4 bits (921), Expect = 2.7e-98
Identity = 183/201 (91.04%), Postives = 190/201 (94.53%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLT+K+P+ GNDL+NQ RSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKKPRAGNDLRNQLRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIP ARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
IVDIPSYRCKPRDIITGK+E+KSRALIQ LDSSP +ELP HLTL P QYKGLVNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITGKDEQKSRALIQKSLDSSPQEELPSHLTLHPFQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWV LKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy Swiss-Prot
Match:
Q1KXV7 (30S ribosomal protein S4, chloroplastic OS=Helianthus annuus OX=4232 GN=rps4 PE=3 SV=1)
HSP 1 Score: 358.6 bits (919), Expect = 4.6e-98
Identity = 182/201 (90.55%), Postives = 190/201 (94.53%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLT+KRP+ G+DL+NQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMA TIP ARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
IVDIPSYRCKPRD I ++E+KSRALIQN LDSSPP+ELP HLTLQP QYKGLVNQIID
Sbjct: 121 RIVDIPSYRCKPRDTIAARDEQKSRALIQNSLDSSPPEELPNHLTLQPFQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWV LKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy TrEMBL
Match:
A0A6H0EQJ1 (30S ribosomal protein S4, chloroplastic OS=Sechium edule OX=184140 GN=rps4 PE=3 SV=1)
HSP 1 Score: 392.1 bits (1006), Expect = 1.4e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy TrEMBL
Match:
X2F260 (30S ribosomal protein S4, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rps4 PE=3 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITAKDEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy TrEMBL
Match:
A0A6H0EW03 (30S ribosomal protein S4, chloroplastic OS=Corallocarpus boehmii OX=386154 GN=rps4 PE=3 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITAKDEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy TrEMBL
Match:
A0A6H0ET69 (30S ribosomal protein S4, chloroplastic OS=Trichosanthes tubiflora OX=1144424 GN=rps4 PE=3 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITAKDEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. ExPASy TrEMBL
Match:
A0A6H0EVH0 (30S ribosomal protein S4, chloroplastic OS=Nothoalsomitra suberosa OX=386201 GN=rps4 PE=3 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
SIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID
Sbjct: 121 SIVDIPSYRCKPRDIITAKDEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
SKWVSLKINELLVVEYYSRQT
Sbjct: 181 SKWVSLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. TAIR 10
Match:
ATCG00380.1 (chloroplast ribosomal protein S4 )
HSP 1 Score: 339.0 bits (868), Expect = 2.7e-93
Identity = 176/201 (87.56%), Postives = 183/201 (91.04%), Query Frame = 0
Query: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
MSRYRGPRFKKIRRLGALPGLTSKRPK G+DL+NQSRS KKSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPKAGSDLRNQSRSVKKSQYRIRLEEKQKLRFHYGL 60
Query: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNG 120
TE QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMA TIPQARQLVNH HILVNG
Sbjct: 61 TEHQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMALTIPQARQLVNHGHILVNG 120
Query: 121 SIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID 180
IVDIPSYRCKPRDIIT K+E+ SR L+QN LDSS P+ELP HLTL QY+GLVNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITVKDEQNSRTLVQNLLDSSAPEELPNHLTLHTFQYEGLVNQIID 180
Query: 181 SKWVSLKINELLVVEYYSRQT 202
K V LKINELLVVEYYSRQT
Sbjct: 181 RKCVGLKINELLVVEYYSRQT 201
BLAST of Sed0002328 vs. TAIR 10
Match:
AT2G07734.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )
HSP 1 Score: 45.1 bits (105), Expect = 8.0e-05
Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 0
Query: 88 EMRLDNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKE 141
E R D I RL TIPQARQ ++HR + VN +V I ++ DII+ +E
Sbjct: 104 ETRFDVIPLRLHFLETIPQARQPISHRRVCVNKGMVSITHFKLSHGDIISFQE 156
BLAST of Sed0002328 vs. TAIR 10
Match:
ATMG00290.1 (mitochondrial ribosomal protein S4 )
HSP 1 Score: 45.1 bits (105), Expect = 8.0e-05
Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 0
Query: 88 EMRLDNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKE 141
E R D I RL TIPQARQ ++HR + VN +V I ++ DII+ +E
Sbjct: 104 ETRFDVIPLRLHFLETIPQARQPISHRRVCVNKGMVSITHFKLSHGDIISFQE 156
BLAST of Sed0002328 vs. TAIR 10
Match:
AT5G39850.1 (Ribosomal protein S4 )
HSP 1 Score: 42.0 bits (97), Expect = 6.7e-04
Identity = 30/97 (30.93%), Postives = 46/97 (47.42%), Query Frame = 0
Query: 36 SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 95
SR ++ + L+EK R G + + + + + VL LE RL
Sbjct: 52 SRIRNAARELLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRL 111
Query: 96 DNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSY 129
I+F+ GMA +I AR L+ RHI V +V+IPS+
Sbjct: 112 QTIVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSF 148
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
YP_009945419.1 | 2.9e-105 | 100.00 | ribosomal protein S4 [Sechium edule] >QIT04135.1 ribosomal protein S4 [Sechium e... | [more] |
QJR52958.1 | 3.2e-104 | 99.00 | ribosomal protein S4 [Herpetospermum pedunculosum] | [more] |
YP_009456148.1 | 3.2e-104 | 99.00 | ribosomal protein S4 [Lagenaria siceraria] >YP_009752498.1 ribosomal protein S4 ... | [more] |
YP_010131096.1 | 7.0e-104 | 98.51 | ribosomal protein S4 [Benincasa hispida] >QPZ75743.1 ribosomal protein S4 [Benin... | [more] |
QZL38595.1 | 9.2e-104 | 98.51 | ribosomal protein S4 [Citrullus naudinianus] | [more] |
Match Name | E-value | Identity | Description | |
Q4VZH3 | 1.0e-105 | 98.01 | 30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 ... | [more] |
Q49KZ6 | 1.9e-99 | 90.55 | 30S ribosomal protein S4, chloroplastic OS=Eucalyptus globulus subsp. globulus O... | [more] |
A6MM38 | 3.2e-99 | 92.04 | 30S ribosomal protein S4, chloroplastic OS=Buxus microphylla OX=153571 GN=rps4 P... | [more] |
A0A337 | 2.7e-98 | 91.04 | 30S ribosomal protein S4, chloroplastic OS=Coffea arabica OX=13443 GN=rps4 PE=3 ... | [more] |
Q1KXV7 | 4.6e-98 | 90.55 | 30S ribosomal protein S4, chloroplastic OS=Helianthus annuus OX=4232 GN=rps4 PE=... | [more] |
Match Name | E-value | Identity | Description | |
A0A6H0EQJ1 | 1.4e-105 | 100.00 | 30S ribosomal protein S4, chloroplastic OS=Sechium edule OX=184140 GN=rps4 PE=3 ... | [more] |
X2F260 | 1.5e-104 | 99.00 | 30S ribosomal protein S4, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rps4 P... | [more] |
A0A6H0EW03 | 1.5e-104 | 99.00 | 30S ribosomal protein S4, chloroplastic OS=Corallocarpus boehmii OX=386154 GN=rp... | [more] |
A0A6H0ET69 | 1.5e-104 | 99.00 | 30S ribosomal protein S4, chloroplastic OS=Trichosanthes tubiflora OX=1144424 GN... | [more] |
A0A6H0EVH0 | 1.5e-104 | 99.00 | 30S ribosomal protein S4, chloroplastic OS=Nothoalsomitra suberosa OX=386201 GN=... | [more] |