Sed0002285 (gene) Chayote v1

Overview


Name	Sed0002285
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR24-like
Location	LG01: 1838324 .. 1839052 (-)
RNA-Seq Expression	Sed0002285
Synteny	Sed0002285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGCCCATTAGTTGGGAAAAAAATTCACTTCCTGAGTGTTGTTGCTGCTGGTGTTGTGGACCCTCTTGATCTAAGCAAGTGTGAAAAGCTGGACTATGACTTGACTTGTGATCAATGGAAAGAATTGACCAATGAGCCTGAAATTTGTGGTATGAATTTCAAAGAATGTGCAAAGATAGAAGAAAATGGGTAGCACTTTTATGATTTGGGCAAAGCCATGTATTCTCATATATACCCAACTACCAGACATCAATACCACACTGTTCTTCTGGAATGGCCAGTTTCATCAGCATAGCATTTCCTTCAGAAACTTTATAAATATAAACATCAAAATGAGCCTTCAAACACCAAACTCAACTCATTCCTAGTTTTTCATCCTCTTCTAGTTAGCTCTATACCAACCAGATCAGAACACTTTTATCCCGAGCAAATGGGGATTCGGTTGCTATCGTTGGTTCCTCATGCCAAATTTTTTTTAAAAATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCACGTAGCCGTTTATGTGGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATAACTTACCTAAACCATCCTTCATTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACCCACAAGGGTGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA

mRNA sequence

ATGGAATGCCCATTAGTTGGGAAAAAAATTCACTTCCTGAGTGTTGTTGCTGCTGGTGTTGTGGACCCTCTTGATCTAAGCAAGTGTGAAAAGCTGGACTATGACTTGACTTGTGATCAATGGAAAGAATTGACCAATGAGCCTGAAATTTGTGTTAGCTCTATACCAACCAGATCAGAACACTTTTATCCCGAGCAAATGGGGATTCGGTTGCTATCGTTGGTTCCTCATGCCAAATTTTTTTTAAAAATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCACGTAGCCGTTTATGTGGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATAACTTACCTAAACCATCCTTCATTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACCCACAAGGGTGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGAATGCCCATTAGTTGGGAAAAAAATTCACTTCCTGAGTGTTGTTGCTGCTGGTGTTGTGGACCCTCTTGATCTAAGCAAGTGTGAAAAGCTGGACTATGACTTGACTTGTGATCAATGGAAAGAATTGACCAATGAGCCTGAAATTTGTGTTAGCTCTATACCAACCAGATCAGAACACTTTTATCCCGAGCAAATGGGGATTCGGTTGCTATCGTTGGTTCCTCATGCCAAATTTTTTTTAAAAATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCACGTAGCCGTTTATGTGGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATAACTTACCTAAACCATCCTTCATTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACCCACAAGGGTGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA

Protein sequence

MECPLVGKKIHFLSVVAAGVVDPLDLSKCEKLDYDLTCDQWKELTNEPEICVSSIPTRSEHFYPEQMGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

Homology

[Close]

BLAST of Sed0002285 vs. NCBI nr
Match: KAG6605019.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIRLLSLVPHAK  LKMQS FTK+QLDVPKGHVAVYVGEIQRKRF+VPI+YLNHPSFQ+
Sbjct: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
Sbjct: 61  LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. NCBI nr
Match: XP_022947574.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023533291.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo] >KAG6605015.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia] >KAG6605021.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.3 bits (477), Expect = 5.1e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIRLLSLVPHAK  LKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LLSHAEEEFGFHHPQG LTIPC+EDAF+DLTSRLQVS
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. NCBI nr
Match: XP_022146170.1 (auxin-responsive protein SAUR21-like [Momordica charantia])

HSP 1 Score: 188.3 bits (477), Expect = 5.1e-44
Identity = 91/97 (93.81%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIRLLSLVPHAK  LKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1   MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQVS
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >KAG6571048.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-43
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIR LSLVPHAK  LKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1   MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LLSHAEE+FGFHHPQG LTIPCKEDAFIDLTSRLQVS
Sbjct: 61  LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. NCBI nr
Match: XP_022947577.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022947578.1 auxin-responsive protein SAUR21-like [Cucurbita moschata] >KAG6605024.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-43
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIRLLSLVPHAK  LKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LL HAEEEFGFHHPQG LTIPC+EDAF+DLTSRLQVS
Sbjct: 61  LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.7e-22
Identity = 48/94 (51.06%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MG R+  +V    F+    +S    ++DVPKG+ AVYVG+ + +RF +P++YLN PSFQ+
Sbjct: 1   MGFRIAGIVRRTSFYTTQAAS---KRVDVPKGYAAVYVGD-KMRRFTIPVSYLNEPSFQE 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRL 161
           LLS AEEEFG+ HP G LTIPCKE+ F+++T+ L
Sbjct: 61  LLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHL 90

[Close]

BLAST of Sed0002285 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.7e-22
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 83  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQG 142
           K+ S  T      PKG +AVYVGE Q+KR++VPI+YLN PSFQ LLS +EEEFGF HP G
Sbjct: 12  KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 143 CLTIPCKEDAFIDLTSRLQ 162
            LTIPC ED FI++TSR Q
Sbjct: 72  GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Sed0002285 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.7e-22
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 96  PKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFID 155
           PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF HP G LTIPC ED FI+
Sbjct: 25  PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 156 LTSRLQ 162
           +TSRLQ
Sbjct: 85  VTSRLQ 90

[Close]

BLAST of Sed0002285 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.7e-22
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 83  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQG 142
           K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +E+EFGF HP G
Sbjct: 12  KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 143 CLTIPCKEDAFIDLTSRLQ 162
            LTIPC ED FI++TSRLQ
Sbjct: 72  GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Sed0002285 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 83  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQG 142
           K+ S  T      PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12  KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 143 CLTIPCKEDAFIDLTSRLQ 162
            LTIPC ED FI++TSRLQ
Sbjct: 72  GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Sed0002285 vs. ExPASy TrEMBL
Match: A0A6J1CWI9 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015449 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.5e-44
Identity = 91/97 (93.81%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIRLLSLVPHAK  LKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1   MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQVS
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. ExPASy TrEMBL
Match: A0A6J1G772 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111451397 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.5e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIRLLSLVPHAK  LKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LLSHAEEEFGFHHPQG LTIPC+EDAF+DLTSRLQVS
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 7.1e-44
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIR LSLVPHAK  LKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1   MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LLSHAEE+FGFHHPQG LTIPCKEDAFIDLTSRLQVS
Sbjct: 61  LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. ExPASy TrEMBL
Match: A0A6J1G6U7 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111451400 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 7.1e-44
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIRLLSLVPHAK  LKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LL HAEEEFGFHHPQG LTIPC+EDAF+DLTSRLQVS
Sbjct: 61  LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 7.1e-44
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQ 126
           MGIR LSLVPHAK  LKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1   MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 127 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           LLSHAEE+FGFHHPQG LTIPCKEDAFIDLTSRLQVS
Sbjct: 61  LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Sed0002285 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-26
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQ 126
           M IR+  ++  +K  LK   S + N + +PKGH+AVYVGE +Q++RFVVP+TYL+HP FQ
Sbjct: 1   MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 127 QLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS 164
           +LL  AEEEFGF HP G LTIPC E  FIDL SRL  S
Sbjct: 61  KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Sed0002285 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 9.6e-25
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHP 126
           M IR+  ++  +K  L+    + SS + + LDVPKG++AVYVGE   KRFVVP++YL+ P
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 127 SFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSR 160
           SFQ LL  AEEEFGF HP G LTIPC E+ FIDL SR
Sbjct: 61  SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Sed0002285 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 67  MGIRLLSLVPHAKFFLKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPIT 126
           MG+   ++    K  LK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPI+
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 127 YLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDL-TSRLQ 162
           +LNHPSF++ LS AEEEFGF+HP G LTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Sed0002285 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-23
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 83  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQG 142
           K+ S  T      PKG +AVYVGE Q+KR++VPI+YLN PSFQ LLS +EEEFGF HP G
Sbjct: 12  KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 143 CLTIPCKEDAFIDLTSRLQ 162
            LTIPC ED FI++TSR Q
Sbjct: 72  GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Sed0002285 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 96  PKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFID 155
           PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF HP G LTIPC ED FI+
Sbjct: 25  PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 156 LTSRLQ 162
           +TSRLQ
Sbjct: 85  VTSRLQ 90

The following BLAST results are available for this feature:

BLAST of Sed0002285 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605019.1	1.7e-44	92.78	Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022947574.1	5.1e-44	92.78	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023533291.1 auxin-...	[more]
XP_022146170.1	5.1e-44	93.81	auxin-responsive protein SAUR21-like [Momordica charantia]	[more]
XP_022944365.1	1.5e-43	92.78	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022947577.1	1.5e-43	91.75	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022947578.1 auxin-...	[more]

BLAST of Sed0002285 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33079	5.7e-22	51.06	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9FJG0	5.7e-22	63.29	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FK62	5.7e-22	71.21	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJF7	9.7e-22	62.03	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	2.2e-21	62.03	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]

BLAST of Sed0002285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWI9	2.5e-44	93.81	auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1G772	2.5e-44	92.78	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1JHE3	7.1e-44	92.78	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]
A0A6J1G6U7	7.1e-44	91.75	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1FVI4	7.1e-44	92.78	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of Sed0002285 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	6.6e-26	58.16	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	9.6e-25	56.70	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.3e-24	54.29	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	4.0e-23	63.29	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	4.0e-23	71.21	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 87..159 e-value: 1.7E-25 score: 89.0
None	No IPR available	PANTHER	PTHR31929:SF51	AUXIN-RESPONSIVE PROTEIN SAUR22-LIKE	coord: 67..161
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 67..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002285.1	Sed0002285.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin