Sed0002224 (gene) Chayote v1

Overview


Name	Sed0002224
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RPM1-interacting protein 4-like
Location	LG01: 11513967 .. 11516262 (-)
RNA-Seq Expression	Sed0002224
Synteny	Sed0002224

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCTCACAATTATATATTTTTTGCATTCTCCGTTTCTGGTCTCTTCGTATCCGATCCCCAGCCCTGCGTCCTGCATTCATGGCGTCGGTAAGATCTGCACACAATTTCTATACCATCTTTGTATTCTTACATTTTCCACTTTTAATTAGTTGAAGAACCTTAACTTTTCGCTATTTCCCCAATTAATTTGCGATTGCGTTCATTGGTATGATCAAAAGGGTTTGATTAAACACCGATCGGTGATAGGTTACATGGTCGCATTTGTAGATTTTGATTATCGATTAATCAATGGCGGGGTATTAACTTAGATGAAGGAGGGAGATTTTGGTTCCAATTTGGAGCTAACAGGGCTCTCTGAATGAAAAAAACCAATCGCCATTGTTATCTATGGTTCGTTTTCTCCTTAGTTTTTATTGCGATTTTCACCTATGAGTTGTTAGCGTCAACAAATTTTCAATCATGAAAACTATGGGTTCATTCATTCTTTAGCTAGGTTCGGTGCTTCTCTATAGTATGTTTCTAAGGAGCTTTATAATTTTCATTTATGGCGATCTTTTCTTCCTTCGGTTTTTTTTAATAAATTCAGAAGTGTTCGGATTAGCTTACGCGTACAATGATTATGCCCATGGCCCACCAAACATACTTTCTGACCTTACAATATTTGGATGTCGAGGAAACCTATAGGAAACTCCACAACTAATTTGTAGGTAGGTGGCAACTATAGGCGGGCGAATCTCTTTAAGGGAAATATATATTTTTGTCATGTATGTCATAGTTTGGCCCCCCAATAAGCAAAATAATTATTATTGTATACCCCACATAATATTTGGTCCTCCAATATTTGTTATCTAGATCTGCCTCTAGTGACAACCATGGATTGAACTCATCACCTCTTATTTTTCTTGATAGGAAACGAAAATTAAGTTACAAAGAGGGAAAAATAAAAAAAGCAATGGCTATCCTCTTTTACAATTAAACTTAGAAATCACCTTTTACTTTTCCAATACCCTCTTGACCACTAGACCATTCCATAATAATTTTCTTTTTGGTATTTATACAAATATATGGGTTTTTGTTTAAGGAACCTTTTTTGTTTTTGTGGCCTTGTTGTTTGTATTTTTTACATTTTCTCAATAAAAGTTTCATTTTTCATCCAAAAAGAAAACATGTAGAAACACAATCAACATTCCATGTGCATAGGAAACCGAAAAATACCCATCTAGATAAGGGAGGATTGTCCGTAATGCTTATTTGCAGACTAAAGAGTGAAAAAGAGCCCTTTTATCCGCCAGTGTGCTCATACATGGCTTAAATTCTGTTGGACGCACGCTGTTCTTCCTTTTGTCAATCCTTCTGTCTGCAAGAGTTATTTTTTTCTTTTTGAAACAAGGGTAACCACGCTCATCCCTAGGTCAGGCACCGGAAAACATCGAAAGAGTAATGTCACAAGTGAATCTTAAACTTGGGACCTTGAAGTTGAAGGGAGCATACCTTCAAAACCCAAGTCTTCAACCAATGTGCCACCCTTTGGGGACGTCTGCAAAAGTTATAGTAAACTATAGAATTGCAGTGTTGATAACAAGTAATTGTGGGTAGGAGGATTCAAACCCATGACTTTTTTGGTCATTGAAAATACACTGATACTCCTGACCCATTGCTCCCGTTGGCGGGTTGTAAAGGCATTTACCAGTAGAGATCACTTGATAAAGTCTCATGTAGATATCATTGCATTATTGCAGCAGGACAACAAGGGTCGCCCACTGCCAAAGTTTGGTGATTGGGATGTAAATAATCCTGCATCTTCAGAAGGATTTACAGTGATATTTAACAAGGCCAGAAATGAGAAGAAGACAACTGGAACTGCTGCCAATATAGTTCAACCACAAAGTAAAGAACCTGTCTATAACAATGAAAGCTTCTCTCAGGATCATCCAACGAAGGTCTGTTTATTTCAAGACTTTGAGATTCAATTTGTTCTTCATATCTTAATTTTAATATATATTTTGGTATTTGGATGTAGAAGAGGTGGTTTTGCTGTGGTTGAAGACACAGTGGTTTCAAGATTTTGAGTTTGTGTAATCTGTTGTGAAAGCCCATAAATTGTGAGAGCCATATCCAACCTCGAACCGCTGGTTCCCAGCAAAGTTGTCGCTCCAACAATGGCTCGATATTATTTCTCTTCACTTTTCACATTGGCTTTCATGATTTATTAACGTTATATAATTAACTTATATCACATGTTATTCTGTTTTAGTACAGGATGGAAAAGATAAATTACGACGATAACCAAAATC

mRNA sequence

CATTCTCACAATTATATATTTTTTGCATTCTCCGTTTCTGGTCTCTTCGTATCCGATCCCCAGCCCTGCGTCCTGCATTCATGGCGTCGCAGGACAACAAGGGTCGCCCACTGCCAAAGTTTGGTGATTGGGATGTAAATAATCCTGCATCTTCAGAAGGATTTACAGTGATATTTAACAAGGCCAGAAATGAGAAGAAGACAACTGGAACTGCTGCCAATATAGTTCAACCACAAAGTAAAGAACCTGTCTATAACAATGAAAGCTTCTCTCAGGATCATCCAACGAAGAAGAGGTGGTTTTGCTGTGGTTGAAGACACAGTGGTTTCAAGATTTTGAGTTTGTGTAATCTGTTGTGAAAGCCCATAAATTGTGAGAGCCATATCCAACCTCGAACCGCTGGTTCCCAGCAAAGTTGTCGCTCCAACAATGGCTCGATATTATTTCTCTTCACTTTTCACATTGGCTTTCATGATTTATTAACGTTATATAATTAACTTATATCACATGTTATTCTGTTTTAGTACAGGATGGAAAAGATAAATTACGACGATAACCAAAATC

Coding sequence (CDS)

ATGGCGTCGCAGGACAACAAGGGTCGCCCACTGCCAAAGTTTGGTGATTGGGATGTAAATAATCCTGCATCTTCAGAAGGATTTACAGTGATATTTAACAAGGCCAGAAATGAGAAGAAGACAACTGGAACTGCTGCCAATATAGTTCAACCACAAAGTAAAGAACCTGTCTATAACAATGAAAGCTTCTCTCAGGATCATCCAACGAAGAAGAGGTGGTTTTGCTGTGGTTGA

Protein sequence

MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNNESFSQDHPTKKRWFCCG

Homology

[Close]

BLAST of Sed0002224 vs. NCBI nr
Match: XP_022137180.1 (uncharacterized protein LOC111008714 isoform X2 [Momordica charantia])

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 58/77 (75.32%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1   MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNN 60
           M+S +++GRPLPKFG+WDVNNPAS+EGFTVIFNKAR+EKKTTGTAA+ V PQ  E +YNN
Sbjct: 59  MSSFEDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAASTVSPQRNESIYNN 118

Query: 61  ESFSQDHPTKKRWFCCG 78
           E+F Q HP KKRWFCCG
Sbjct: 119 ETFPQYHPPKKRWFCCG 135

[Close]

BLAST of Sed0002224 vs. NCBI nr
Match: XP_038894676.1 (protein NOI4 isoform X1 [Benincasa hispida])

HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27
Identity = 63/77 (81.82%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 1  MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNN 60
          MASQD KGRPLPKFG+WDVNNPAS+EGFTVIFNKARNEKKTTGTAAN V  Q  EPV+NN
Sbjct: 1  MASQD-KGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQISEPVFNN 60

Query: 61 ESFSQDHPTKKRWFCCG 78
          ES+ Q  P KKRWFCCG
Sbjct: 61 ESYPQYPPPKKRWFCCG 76

[Close]

BLAST of Sed0002224 vs. NCBI nr
Match: XP_022954832.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_023542808.1 RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo] >KAG6573102.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012289.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.3 bits (329), Expect = 3.5e-27
Identity = 61/77 (79.22%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 1  MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNN 60
          MA QD KGRPLPKFG+WDVNNPAS+EGFTVIFNKAR+EKKTTG+ AN+V  QS EP YNN
Sbjct: 1  MAPQD-KGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNN 60

Query: 61 ESFSQDHPTKKRWFCCG 78
          ESF Q  P KKRWFCCG
Sbjct: 61 ESFPQSPPPKKRWFCCG 76

[Close]

BLAST of Sed0002224 vs. NCBI nr
Match: XP_004152507.2 (protein NOI4 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 4.5e-27
Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 1   MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNN 60
           MASQD KGR LPKFGDWDVNNPAS+EGFTVIFNKARNEKKTTGTAAN+V  +  EPV+NN
Sbjct: 59  MASQD-KGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNN 118

Query: 61  ESFSQDHPTKKRWFCCG 78
           ES+ Q  P KKRWFCCG
Sbjct: 119 ESYPQYPPPKKRWFCCG 134

[Close]

BLAST of Sed0002224 vs. NCBI nr
Match: XP_008439256.1 (PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo])

HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26
Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 1  MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNN 60
          MASQD +GRPLPKFG+WDVNNPAS+EGFTVIFNKARNEKKTTG AAN+V  +  EPV+NN
Sbjct: 1  MASQD-RGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNN 60

Query: 61 ESFSQDHPTKKRWFCCG 78
          ES+ Q  P KKRWFCCG
Sbjct: 61 ESYPQYPPPKKRWFCCG 76

[Close]

BLAST of Sed0002224 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-14
Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 6  NKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNNESFSQ 65
          +KGRPLPKFG+WDVN+PAS+EGFTVIFNKAR+EKKT G   +    +S E    +     
Sbjct: 3  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGS--PGKSSEGHVKSGGGDP 62

Query: 66 DHPTKKRWFCC 77
            P  K+W CC
Sbjct: 63 SKPQPKKWLCC 71

[Close]

BLAST of Sed0002224 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 6.0e-06
Identity = 28/66 (42.42%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 11  LPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNNESFSQDHPTK 70
           +PKFGDWD NNP+S++G+T IFNK R E+    + AN V   S+ P +     S  +P  
Sbjct: 148 VPKFGDWDENNPSSADGYTHIFNKVREER---SSGAN-VSGSSRTPTHQ----SSRNPNN 205

Query: 71  KRWFCC 77
               CC
Sbjct: 208 TSSCCC 205

[Close]

BLAST of Sed0002224 vs. ExPASy TrEMBL
Match: A0A6J1C5Z3 (uncharacterized protein LOC111008714 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008714 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.9e-28
Identity = 58/77 (75.32%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1   MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNN 60
           M+S +++GRPLPKFG+WDVNNPAS+EGFTVIFNKAR+EKKTTGTAA+ V PQ  E +YNN
Sbjct: 59  MSSFEDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAASTVSPQRNESIYNN 118

Query: 61  ESFSQDHPTKKRWFCCG 78
           E+F Q HP KKRWFCCG
Sbjct: 119 ETFPQYHPPKKRWFCCG 135

[Close]

BLAST of Sed0002224 vs. ExPASy TrEMBL
Match: A0A6J1GRZ4 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111456977 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27
Identity = 61/77 (79.22%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 1  MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNN 60
          MA QD KGRPLPKFG+WDVNNPAS+EGFTVIFNKAR+EKKTTG+ AN+V  QS EP YNN
Sbjct: 1  MAPQD-KGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNN 60

Query: 61 ESFSQDHPTKKRWFCCG 78
          ESF Q  P KKRWFCCG
Sbjct: 61 ESFPQSPPPKKRWFCCG 76

[Close]

BLAST of Sed0002224 vs. ExPASy TrEMBL
Match: A0A0A0LRE5 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050070 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.2e-27
Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 1   MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNN 60
           MASQD KGR LPKFGDWDVNNPAS+EGFTVIFNKARNEKKTTGTAAN+V  +  EPV+NN
Sbjct: 59  MASQD-KGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNN 118

Query: 61  ESFSQDHPTKKRWFCCG 78
           ES+ Q  P KKRWFCCG
Sbjct: 119 ESYPQYPPPKKRWFCCG 134

[Close]

BLAST of Sed0002224 vs. ExPASy TrEMBL
Match: A0A1S3AZ04 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484092 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.4e-27
Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 1  MASQDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNN 60
          MASQD +GRPLPKFG+WDVNNPAS+EGFTVIFNKARNEKKTTG AAN+V  +  EPV+NN
Sbjct: 1  MASQD-RGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNN 60

Query: 61 ESFSQDHPTKKRWFCCG 78
          ES+ Q  P KKRWFCCG
Sbjct: 61 ESYPQYPPPKKRWFCCG 76

[Close]

BLAST of Sed0002224 vs. ExPASy TrEMBL
Match: A0A6J1C6I4 (uncharacterized protein LOC111008714 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008714 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.4e-27
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 4   QDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNNESF 63
           + ++GRPLPKFG+WDVNNPAS+EGFTVIFNKAR+EKKTTGTAA+ V PQ  E +YNNE+F
Sbjct: 63  EQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAASTVSPQRNESIYNNETF 122

Query: 64  SQDHPTKKRWFCCG 78
            Q HP KKRWFCCG
Sbjct: 123 PQYHPPKKRWFCCG 136

[Close]

BLAST of Sed0002224 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 87.0 bits (214), Expect = 7.0e-18
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 6  NKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNNESFSQ 65
          +KGRPLPKFG+WDVN+P+S+EGFTVIFNKARNEKK  G + +   P   EP YN      
Sbjct: 3  DKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDS---PGKDEPGYNKNGEVL 62

Query: 66 DHPTKKRWFCC 77
          + P KK WFCC
Sbjct: 63 EKPAKK-WFCC 69

[Close]

BLAST of Sed0002224 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 84.0 bits (206), Expect = 5.9e-17
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 5  DNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKT---TGTAAN-IVQPQ-SKEPVYN 64
          +NKG+PLPKFG+WDVNNPAS+EGFTVIF+KA +EKKT   +G   N +V PQ ++    N
Sbjct: 3  ENKGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQN 62

Query: 65 NESFSQDHPTKKRWFC 76
          N   SQ+   K +WFC
Sbjct: 63 NNHSSQNPKAKNKWFC 78

[Close]

BLAST of Sed0002224 vs. TAIR 10
Match: AT3G48450.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 80.5 bits (197), Expect = 6.6e-16
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 6  NKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTA-----ANIVQPQSKEPVYNN 65
          N+ RPLPKFG+WD  NP S+EGFTVIFNKAR++KKT  TA     + +  P+++EP  NN
Sbjct: 5  NRARPLPKFGEWDATNPGSAEGFTVIFNKARDDKKTMKTAVAGPESIVSPPRNEEPPKNN 64

Query: 66 ESFSQDHPT--------KKRWFC 76
           +   +H T        KK+W C
Sbjct: 65 NNHHHNHHTRHSQTPRSKKKWLC 87

[Close]

BLAST of Sed0002224 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 80.1 bits (196), Expect = 8.6e-16
Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 6  NKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNNESFSQ 65
          +KGRPLPKFG+WDVN+PAS+EGFTVIFNKAR+EKKT G   +    +S E    +     
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGS--PGKSSEGHVKSGGGDP 78

Query: 66 DHPTKKRWFCC 77
            P  K+W CC
Sbjct: 79 SKPQPKKWLCC 87

[Close]

BLAST of Sed0002224 vs. TAIR 10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 75.9 bits (185), Expect = 1.6e-14
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 4  QDNKGRPLPKFGDWDVNNPASSEGFTVIFNKARNEKKTTGTAANIVQPQSKEPVYNNESF 63
          +  + RPLPKFG+WDVN+PAS+EGFTVIF KAR++KKT  +     Q +      NN+  
Sbjct: 8  RQQQDRPLPKFGEWDVNDPASAEGFTVIFAKARDDKKTNASGRAASQRRD-----NNK-- 67

Query: 64 SQDHPTKKRWFCC 77
          SQD PTKKR FCC
Sbjct: 68 SQDEPTKKR-FCC 72

The following BLAST results are available for this feature:

BLAST of Sed0002224 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137180.1	2.0e-27	75.32	uncharacterized protein LOC111008714 isoform X2 [Momordica charantia]	[more]
XP_038894676.1	2.7e-27	81.82	protein NOI4 isoform X1 [Benincasa hispida]	[more]
XP_022954832.1	3.5e-27	79.22	RPM1-interacting protein 4-like [Cucurbita moschata] >XP_023542808.1 RPM1-intera...	[more]
XP_004152507.2	4.5e-27	80.52	protein NOI4 [Cucumis sativus]	[more]
XP_008439256.1	1.3e-26	77.92	PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]	[more]

BLAST of Sed0002224 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	1.2e-14	54.93	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	6.0e-06	42.42	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of Sed0002224 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5Z3	9.9e-28	75.32	uncharacterized protein LOC111008714 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1GRZ4	1.7e-27	79.22	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111456977 PE...	[more]
A0A0A0LRE5	2.2e-27	80.52	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G05...	[more]
A0A1S3AZ04	6.4e-27	77.92	RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484092 PE...	[more]
A0A6J1C6I4	8.4e-27	75.68	uncharacterized protein LOC111008714 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0002224 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04410.1	7.0e-18	60.56	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	5.9e-17	56.58	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT3G48450.1	6.6e-16	48.19	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	8.6e-16	54.93	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	1.6e-14	56.16	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 6..41 e-value: 3.0E-22 score: 77.7
None	No IPR available	PANTHER	PTHR33159:SF69	RPM1-INTERACTING PROTEIN 4-LIKE	coord: 4..75
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 4..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002224.1	Sed0002224.1	mRNA
Sed0002224.2	Sed0002224.2	mRNA