Sed0002119 (gene) Chayote v1

Overview


Name	Sed0002119
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG12: 31460380 .. 31461542 (-)
RNA-Seq Expression	Sed0002119
Synteny	Sed0002119

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGATATTTAAGTGCCAGTTCTTGCCTCTTCCAAATCACGAACTCTCTCTCCCTCTGTTCATTGATATTTTGCTTTCTCTTTTGTAATTAATTTTCCCCAACTTCTCTGCAATTCTTATCTTCTCTTTGAATTCATCCATTTCTGTATAATCGTTCGTCTCTCTGATGGAAGCCTGCATTCACAGCAGCAACAAGCGACTACGCAACGAATCCAACGATTCTCCATTCAATTTCATCGGATCCAAGCTCCTCCGCCTCGATTCCGACGAACTAGATCTCATCTCGCCGGATCCGGATCCGGACGATCGCGATCCACAGATCAGTTCCGATTCGTCGAATGCGGAATCGATCGATTCGAAACAGCACGCCGATGATTCAGCCAAGGAAGAACTACTGAAGATTCTCGAAGAAGCCGACGCTTCAATTGATCGCGATTCGGCGATTCAAGATCTGGATTCCGTGATCAGAAGCTTCGAGGAGGAGATTCAAGTTCCGGTGCAGCCGGAACTCGGATACCTTCTAGAAGCGTCCGATGACGAATTAGGCCTTCCGCCGGCCGGAAAGAGCGGAGAAATCGAGGCCGAGGCTGTGAATTTTGCGGCGGAATTTGAGGATGAGGTTTCTGGTTGCTGTTGGCTGGAGAATTTGAGCAGTGAGAATGAATCGAATCAGGCGGAGGAAGAGGTGGTGGAGTTGCCGTCGTCTCCGCCGCCGTATCGGTCGGAGACGATGTACTGTTTATAATGAAATGGATTGTACTGTTTATAATAACATTCAAGAATTGAAAAAAAAAAAAAAAAACTGGAATTTCTTTTTAAGAACAGGGGAAAGAAAAATGACTACACAGAACTTGCGTTGACTGATGTTTCGCACTTTGATTCTGTCATTTGAAAAAGTACTTATTTTCTGCATTTTAAAAATATGCTAAATTTTTAATTTTGTATTTGTGACGTGAAGAAAGTTGTAATTTACTTAGTTTTTATGTTTAGATAAATTTAGAATTCAGTCTTTGTAATTAAAGACACTCAAATTTAGTTTTTAAATATGGTTTTTATTATTTGTAATTATTATGGAATGGGTTGAGGCGATTAGTTATTGTTAGTTTATTTTTACTCTACCATCTTATGTTCGATCTTTTGTAGTATATATAATCCTCATTTCCC

mRNA sequence

CCGATATTTAAGTGCCAGTTCTTGCCTCTTCCAAATCACGAACTCTCTCTCCCTCTGTTCATTGATATTTTGCTTTCTCTTTTGTAATTAATTTTCCCCAACTTCTCTGCAATTCTTATCTTCTCTTTGAATTCATCCATTTCTGTATAATCGTTCGTCTCTCTGATGGAAGCCTGCATTCACAGCAGCAACAAGCGACTACGCAACGAATCCAACGATTCTCCATTCAATTTCATCGGATCCAAGCTCCTCCGCCTCGATTCCGACGAACTAGATCTCATCTCGCCGGATCCGGATCCGGACGATCGCGATCCACAGATCAGTTCCGATTCGTCGAATGCGGAATCGATCGATTCGAAACAGCACGCCGATGATTCAGCCAAGGAAGAACTACTGAAGATTCTCGAAGAAGCCGACGCTTCAATTGATCGCGATTCGGCGATTCAAGATCTGGATTCCGTGATCAGAAGCTTCGAGGAGGAGATTCAAGTTCCGGTGCAGCCGGAACTCGGATACCTTCTAGAAGCGTCCGATGACGAATTAGGCCTTCCGCCGGCCGGAAAGAGCGGAGAAATCGAGGCCGAGGCTGTGAATTTTGCGGCGGAATTTGAGGATGAGGTTTCTGGTTGCTGTTGGCTGGAGAATTTGAGCAGTGAGAATGAATCGAATCAGGCGGAGGAAGAGGTGGTGGAGTTGCCGTCGTCTCCGCCGCCGTATCGGTCGGAGACGATGTACTGTTTATAATGAAATGGATTGTACTGTTTATAATAACATTCAAGAATTGAAAAAAAAAAAAAAAAACTGGAATTTCTTTTTAAGAACAGGGGAAAGAAAAATGACTACACAGAACTTGCGTTGACTGATGTTTCGCACTTTGATTCTGTCATTTGAAAAAGTACTTATTTTCTGCATTTTAAAAATATGCTAAATTTTTAATTTTGTATTTGTGACGTGAAGAAAGTTGTAATTTACTTAGTTTTTATGTTTAGATAAATTTAGAATTCAGTCTTTGTAATTAAAGACACTCAAATTTAGTTTTTAAATATGGTTTTTATTATTTGTAATTATTATGGAATGGGTTGAGGCGATTAGTTATTGTTAGTTTATTTTTACTCTACCATCTTATGTTCGATCTTTTGTAGTATATATAATCCTCATTTCCC

Coding sequence (CDS)

ATGGAAGCCTGCATTCACAGCAGCAACAAGCGACTACGCAACGAATCCAACGATTCTCCATTCAATTTCATCGGATCCAAGCTCCTCCGCCTCGATTCCGACGAACTAGATCTCATCTCGCCGGATCCGGATCCGGACGATCGCGATCCACAGATCAGTTCCGATTCGTCGAATGCGGAATCGATCGATTCGAAACAGCACGCCGATGATTCAGCCAAGGAAGAACTACTGAAGATTCTCGAAGAAGCCGACGCTTCAATTGATCGCGATTCGGCGATTCAAGATCTGGATTCCGTGATCAGAAGCTTCGAGGAGGAGATTCAAGTTCCGGTGCAGCCGGAACTCGGATACCTTCTAGAAGCGTCCGATGACGAATTAGGCCTTCCGCCGGCCGGAAAGAGCGGAGAAATCGAGGCCGAGGCTGTGAATTTTGCGGCGGAATTTGAGGATGAGGTTTCTGGTTGCTGTTGGCTGGAGAATTTGAGCAGTGAGAATGAATCGAATCAGGCGGAGGAAGAGGTGGTGGAGTTGCCGTCGTCTCCGCCGCCGTATCGGTCGGAGACGATGTACTGTTTATAA

Protein sequence

MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQVPVQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAEFEDEVSGCCWLENLSSENESNQAEEEVVELPSSPPPYRSETMYCL

Homology

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BLAST of Sed0002119 vs. NCBI nr
Match: KAG7021606.1 (hypothetical protein SDJN02_15332, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-43
Identity = 129/230 (56.09%), Postives = 147/230 (63.91%), Query Frame = 0


Query: 1   MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAE 60
           ME CI  S KR+R+ESN+S FNF+GSK+LR DS E + ISPD D    D  + S SS+AE
Sbjct: 1   MEPCI-DSRKRVRDESNESLFNFVGSKILRFDSAEFNFISPDLD----DAPVDSVSSDAE 60

Query: 61  SIDSKQ----HADDSA---------KEELLKILEEADASIDRDSAIQDLDSVIRSFEEEI 120
           SI SKQ    H++DS          +E+LLKILEEAD SIDR+ AI DLDSVI SFE+EI
Sbjct: 61  SIVSKQSGAIHSNDSGLDSFQPLPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEI 120

Query: 121 QVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAE------------FEDEV 180
            VP   VQPELGYLLEASDDELGLPPA   GE+  E VNF  +            FEDEV
Sbjct: 121 NVPVPAVQPELGYLLEASDDELGLPPAALKGEM--EPVNFGGKYSGSAGMKGFLGFEDEV 180

Query: 181 SGCCWLENLSSENESNQAEEEVVELPS----------SPPPYRSETMYCL 193
              CWLENLSSE E N+ EEEV  L              PPYRSETM+CL
Sbjct: 181 PNYCWLENLSSEIEWNRREEEVAALGGLLDHNTDGAVELPPYRSETMFCL 223

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BLAST of Sed0002119 vs. NCBI nr
Match: KAG6587646.1 (hypothetical protein SDJN03_16211, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.0 bits (471), Expect = 3.0e-43
Identity = 128/230 (55.65%), Postives = 147/230 (63.91%), Query Frame = 0


Query: 1   MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAE 60
           ME CI  S KR+R+ESN+S FNF+GSK+LR DS E + ISPD D    D  + S SS+AE
Sbjct: 1   MEPCI-DSRKRVRDESNESLFNFVGSKILRFDSAEFNFISPDLD----DAPVDSVSSDAE 60

Query: 61  SIDSKQ----HADDSA---------KEELLKILEEADASIDRDSAIQDLDSVIRSFEEEI 120
           SI SKQ    H++DS          +E+LLKIL+EAD SIDR+ AI DLDSVI SFE+EI
Sbjct: 61  SIVSKQSGAIHSNDSGLDSFQPLPIQEDLLKILDEADVSIDRELAIPDLDSVISSFEKEI 120

Query: 121 QVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAE------------FEDEV 180
            VP   VQPELGYLLEASDDELGLPPA   GE+  E VNF  +            FEDEV
Sbjct: 121 NVPVPAVQPELGYLLEASDDELGLPPAALKGEM--EPVNFGGKYSGSAGMKGFLGFEDEV 180

Query: 181 SGCCWLENLSSENESNQAEEEVVELPS----------SPPPYRSETMYCL 193
              CWLENLSSE E N+ EEEV  L              PPYRSETM+CL
Sbjct: 181 PNYCWLENLSSEIEWNRREEEVAALGGLLDHNTDGAVELPPYRSETMFCL 223

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BLAST of Sed0002119 vs. NCBI nr
Match: XP_023531746.1 (uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo] >XP_023531747.1 uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 3.0e-43
Identity = 127/230 (55.22%), Postives = 148/230 (64.35%), Query Frame = 0


Query: 1   MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAE 60
           ME CI  S KR+R+ESN+S FNF+GSK+LR DS E + ISPD D    D  + S SS+AE
Sbjct: 1   MEPCI-DSRKRVRDESNESLFNFVGSKILRFDSAEFNFISPDFD----DAPVDSVSSDAE 60

Query: 61  SIDSKQ----HADDSA---------KEELLKILEEADASIDRDSAIQDLDSVIRSFEEEI 120
           SI SKQ    H++DS          +E+LLKIL+EAD SIDR+ AI DLDSVI SFE+EI
Sbjct: 61  SIVSKQSGAIHSNDSGLDSFQPLPIREDLLKILDEADVSIDRELAIPDLDSVISSFEKEI 120

Query: 121 QVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAE------------FEDEV 180
            VP   VQPELGYLLEASDDELGLPPA   GE+  E VNF  +            FEDEV
Sbjct: 121 NVPVPAVQPELGYLLEASDDELGLPPAALKGEM--EPVNFGGKYSGIAGMKGFLGFEDEV 180

Query: 181 SGCCWLENLSSENESNQAEEEVVELPS----------SPPPYRSETMYCL 193
              CWLENLSSE E N++E+EV  L              PPYRSETM+CL
Sbjct: 181 PNYCWLENLSSEIEWNRSEDEVAALGGLLDHNTDGAVEMPPYRSETMFCL 223

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BLAST of Sed0002119 vs. NCBI nr
Match: XP_022921385.1 (uncharacterized protein LOC111429674 [Cucurbita moschata])

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-38
Identity = 124/219 (56.62%), Postives = 146/219 (66.67%), Query Frame = 0


Query: 1   MEACIHSSNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSN 60
           MEAC+  S KRLR+ESNDS FNFIG  SK +RLDS  LD+          D  I+S SS+
Sbjct: 1   MEACV-DSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDV---------DDAPIASVSSD 60

Query: 61  AESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQVPV---QPEL 120
           A+SIDS Q   +  +++LLKIL++ DA IDR+S IQDLDSVIRSFE+EIQVPV   QPEL
Sbjct: 61  AKSIDSFQ--ANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPEL 120

Query: 121 GYLLEASDDELGLPPAGKSGEIEAEAVNFAAEF------------EDE-VSGCCWLENLS 180
           G+LLEASDDELGLPPAG+  + E EAVNFAAEF            EDE V   CWLENL 
Sbjct: 121 GFLLEASDDELGLPPAGE--KEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLR 180

Query: 181 SENESNQAEEEVVEL---------PSSPPPYRSETMYCL 193
           SENE N+ EEE V +          ++   YRSETM CL
Sbjct: 181 SENEWNREEEEEVVVLGGLFDHTDVATELAYRSETMPCL 205

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BLAST of Sed0002119 vs. NCBI nr
Match: KAG7023238.1 (hypothetical protein SDJN02_14263, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167.9 bits (424), Expect = 8.4e-38
Identity = 123/219 (56.16%), Postives = 145/219 (66.21%), Query Frame = 0


Query: 1   MEACIHSSNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSN 60
           MEAC+  S KRLR+ES DS FNFIG  SK +RLDS  LD+          D  I+S SS+
Sbjct: 1   MEACV-DSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDV---------DDAPIASVSSD 60

Query: 61  AESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQVP---VQPEL 120
           A+SIDS Q   +  +++LLKIL++ DA IDR+S IQDLDSVIRSFE+EIQVP   VQPEL
Sbjct: 61  AKSIDSFQ--ANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPEL 120

Query: 121 GYLLEASDDELGLPPAGKSGEIEAEAVNFAAEF------------EDE-VSGCCWLENLS 180
           G+LLEASDDELGLPPAG+  + E EAVNFAAEF            EDE V   CWLENL 
Sbjct: 121 GFLLEASDDELGLPPAGE--KEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLR 180

Query: 181 SENESNQAEEEVVEL---------PSSPPPYRSETMYCL 193
           SENE N+ EEE V +          ++   YRSETM CL
Sbjct: 181 SENEWNREEEEEVVVLGGLFDHTDVATELAYRSETMPCL 205

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BLAST of Sed0002119 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 8.2e-39
Identity = 124/219 (56.62%), Postives = 146/219 (66.67%), Query Frame = 0


Query: 1   MEACIHSSNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSN 60
           MEAC+  S KRLR+ESNDS FNFIG  SK +RLDS  LD+          D  I+S SS+
Sbjct: 1   MEACV-DSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDV---------DDAPIASVSSD 60

Query: 61  AESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQVPV---QPEL 120
           A+SIDS Q   +  +++LLKIL++ DA IDR+S IQDLDSVIRSFE+EIQVPV   QPEL
Sbjct: 61  AKSIDSFQ--ANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPEL 120

Query: 121 GYLLEASDDELGLPPAGKSGEIEAEAVNFAAEF------------EDE-VSGCCWLENLS 180
           G+LLEASDDELGLPPAG+  + E EAVNFAAEF            EDE V   CWLENL 
Sbjct: 121 GFLLEASDDELGLPPAGE--KEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLR 180

Query: 181 SENESNQAEEEVVEL---------PSSPPPYRSETMYCL 193
           SENE N+ EEE V +          ++   YRSETM CL
Sbjct: 181 SENEWNREEEEEVVVLGGLFDHTDVATELAYRSETMPCL 205

[Close]

BLAST of Sed0002119 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.5e-27
Identity = 107/217 (49.31%), Postives = 133/217 (61.29%), Query Frame = 0


Query: 1   MEACIHSSNKRLRNESN-DSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSS 60
           ME C+  + KRLR++SN DS FN IG  SK LRL+           +P D     + D+ 
Sbjct: 21  MEPCV-DTRKRLRDDSNDDSLFNSIGSSSKFLRLE-----------NPADS----NFDAP 80

Query: 61  NAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQVP---VQPE 120
            ++S DS Q +  + +E+LLKIL++ DASIDR++AIQDLDSVIRSFE+EI+VP   VQPE
Sbjct: 81  VSQSTDSFQ-SHHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPE 140

Query: 121 LGYLLEASDDELGLPPAGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENE- 180
           LG+LLEASDDELGLPPAG+  EIE      +  V     FEDE VS  CW +NL  E + 
Sbjct: 141 LGFLLEASDDELGLPPAGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKE 200

Query: 181 -SNQAEEEVVEL----------PSSPPPYRSETMYCL 193
            S + EEEVV L             P  YRSE M CL
Sbjct: 201 WSPEEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 220

[Close]

BLAST of Sed0002119 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.2e-27
Identity = 106/217 (48.85%), Postives = 132/217 (60.83%), Query Frame = 0


Query: 1   MEACIHSSNKRLRNESN-DSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSS 60
           ME C+  + KRLR++SN DS FN IG  SK LRL+           +P D     + D+ 
Sbjct: 21  MEPCV-DTRKRLRDDSNDDSLFNSIGSSSKFLRLE-----------NPADS----NFDAP 80

Query: 61  NAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQVP---VQPE 120
            ++S DS Q +  + +E+LLKIL++ DASIDR++AIQDLDSVIRSFE+EI+VP   VQPE
Sbjct: 81  VSQSTDSFQ-SHHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPE 140

Query: 121 LGYLLEASDDELGLPPAGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENES 180
           LG+LLEASDDELGLPPAG+  EIE      +  V     FEDE VS  CW +NL  E + 
Sbjct: 141 LGFLLEASDDELGLPPAGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKE 200

Query: 181 --NQAEEEVVEL----------PSSPPPYRSETMYCL 193
              + EEEVV L             P  YRSE M CL
Sbjct: 201 WIPEEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 220

[Close]

BLAST of Sed0002119 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.2e-27
Identity = 106/217 (48.85%), Postives = 132/217 (60.83%), Query Frame = 0


Query: 1   MEACIHSSNKRLRNESN-DSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSS 60
           ME C+  + KRLR++SN DS FN IG  SK LRL+           +P D     + D+ 
Sbjct: 1   MEPCV-DTRKRLRDDSNDDSLFNSIGSSSKFLRLE-----------NPADS----NFDAP 60

Query: 61  NAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQVP---VQPE 120
            ++S DS Q +  + +E+LLKIL++ DASIDR++AIQDLDSVIRSFE+EI+VP   VQPE
Sbjct: 61  VSQSTDSFQ-SHHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPE 120

Query: 121 LGYLLEASDDELGLPPAGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENES 180
           LG+LLEASDDELGLPPAG+  EIE      +  V     FEDE VS  CW +NL  E + 
Sbjct: 121 LGFLLEASDDELGLPPAGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKE 180

Query: 181 --NQAEEEVVEL----------PSSPPPYRSETMYCL 193
              + EEEVV L             P  YRSE M CL
Sbjct: 181 WIPEEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 200

[Close]

BLAST of Sed0002119 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 6.1e-26
Identity = 104/214 (48.60%), Postives = 126/214 (58.88%), Query Frame = 0


Query: 8   SNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSK 67
           S KRLR++SNDS FN IG  SK LRL+         +P   + D  +S       S DS 
Sbjct: 7   SRKRLRDDSNDSLFNSIGSNSKFLRLE---------NPAASNFDAPVS------HSTDS- 66

Query: 68  QHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQVP-------VQPELGYL 127
            H+  + +E+LLKIL++ DASIDR++ IQDLDSVIRSFE+EI+VP       VQPELG+L
Sbjct: 67  FHSHHTIQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFL 126

Query: 128 LEASDDELGLPP-AGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENE--SN 187
           LEASDDELGLPP AG+  EIE      +  V     FEDE VS  CW +NL  E +  S 
Sbjct: 127 LEASDDELGLPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWST 186

Query: 188 QAEEEVVEL----------PSSPPPYRSETMYCL 193
           + EEEVV L             P  YRSE M CL
Sbjct: 187 EEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 204

[Close]

BLAST of Sed0002119 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 3.1e-06
Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 36  LDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQD 95
           LD+   D     R    S D +  +S + K+  DD     L  +L+++D     +   QD
Sbjct: 6   LDITRTDSAEKKRVRDESFDEAVLDSPEVKRLRDD-----LFDVLDDSDP----EPVSQD 65

Query: 96  LDSVIRSFEEEIQV-------------PVQPELGYLLEASDDELGLPP 131
           LDSV++SFE+E+                 QP+LGYLLEASDDELGLPP
Sbjct: 66  LDSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPP 104

[Close]

BLAST of Sed0002119 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 49.7 bits (117), Expect = 3.1e-06
Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 36  LDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQD 95
           LD+   D     R    S D +  +S + K+  DD     L  +L+++D     +   QD
Sbjct: 6   LDITRTDSAEKKRVRDESFDEAVLDSPEVKRLRDD-----LFDVLDDSDP----EPVSQD 65

Query: 96  LDSVIRSFEEEIQV-------------PVQPELGYLLEASDDELGLPP 131
           LDSV++SFE+E+                 QP+LGYLLEASDDELGLPP
Sbjct: 66  LDSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPP 104

[Close]

BLAST of Sed0002119 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 49.7 bits (117), Expect = 3.1e-06
Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 36  LDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQD 95
           LD+   D     R    S D +  +S + K+  DD     L  +L+++D     +   QD
Sbjct: 6   LDITRTDSAEKKRVRDESFDEAVLDSPEVKRLRDD-----LFDVLDDSDP----EPVSQD 65

Query: 96  LDSVIRSFEEEIQV-------------PVQPELGYLLEASDDELGLPP 131
           LDSV++SFE+E+                 QP+LGYLLEASDDELGLPP
Sbjct: 66  LDSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPP 104

[Close]

BLAST of Sed0002119 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 9.0e-06
Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 57  SNAESIDSKQHAD--DSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQV----- 116
           +  +S+ +K+  D  D    ++ ++ ++       D   QDLDSV++SFE E+       
Sbjct: 10  TRTDSVGNKRVRDGLDLDSPDVKRLRDDLFDDSGLDPVSQDLDSVMKSFENELSTTTAAL 69

Query: 117 ---PVQPELGYLLEASDDELGLPP 131
                QP+LGYL EASDDELGLPP
Sbjct: 70  SSGETQPDLGYLFEASDDELGLPP 93

The following BLAST results are available for this feature:

BLAST of Sed0002119 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021606.1	1.3e-43	56.09	hypothetical protein SDJN02_15332, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6587646.1	3.0e-43	55.65	hypothetical protein SDJN03_16211, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023531746.1	3.0e-43	55.22	uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo] >XP_023531747....	[more]
XP_022921385.1	1.7e-38	56.62	uncharacterized protein LOC111429674 [Cucurbita moschata]	[more]
KAG7023238.1	8.4e-38	56.16	hypothetical protein SDJN02_14263, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Sed0002119 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002119 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5H5	8.2e-39	56.62	uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC1114296...	[more]
A0A5D3DXI3	2.5e-27	49.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UZW3	7.2e-27	48.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BWV1	7.2e-27	48.85	uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=...	[more]
A0A0A0LS21	6.1e-26	48.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1	[more]

BLAST of Sed0002119 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	3.1e-06	37.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	3.1e-06	37.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	3.1e-06	37.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	9.0e-06	38.10	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..53
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 7..175
None	No IPR available	PANTHER	PTHR34539:SF15	SUBFAMILY NOT NAMED	coord: 7..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002119.1	Sed0002119.1	mRNA