Sed0001868 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGCTATAAAATTAGAGGTTGGAATTCTGTTCATTAAATATTATTGTATAAAAAAAAAAATCAAAATTCGTGCAAATTTGTAGTTGACCCAAAAACCAAGAGGAACGGTGGTAGTTCGACCTCTGCCCTTTGAACATCGCTTTTCTTTTTCTTCGACTCCGAGAAGGCTCTGGAAAGTCTCCCATGGCGTACGTCGAACGAGGTTCTTTCTCAATTTCTAATCGCTATTATTGTTTCAATTTCACTGCCTAAGAGTTTTGTGGTTCACTTCAGGATTTGAACCATTGCCCTATTTCCTGCTGTAACTTGTAATATGAATTTCATGATTCTGATTTCGATTTTGAGCTCGATCGGCCTAGATCCCATTAATTTCTTGGTATTCTGAGGGAGCTTTCATATATCTGACTGCGTATCTTTTGATCTAATTTTTCTAACCATGTCTCAGAATCGTCATGAATTTTATGTTATTCTAGGGTTTGCTTGCCGCATCTCGATCAGGGGAAATCGTAATCACCTAAATCTTAACTCGGATTTGATGAAATTCACGACCTAGGTTTATTTTTGCTTTTATCTTTTGTCTACGGATTGGATTGTCCAATTGGTTCATAATAACATGGTGGATGATCACTGCGGGGGATTTCTAGTCATTTGATGATTTAGATAAGGCACGTAATTGGACTTCTTATTTACGTCTCCTAGTGGCGGTCCAATGGTTGAGTGCTTGAACTTTGAGCTCTCAAGTTTCCAGATCTAAGGCAACTGGGGGAATTAATTTTACTGTGGCCTTCAATTTTGCTTTCGGTCCTTCGATGTATCTTGGTGCCGAGTCTAGGGATAAATTAGTAGTGACTCTAAATTTAGAGGACTAAAGCTCCAAATTCTTGAGTTATGTTATCAAAAGAAAAAAAAATTGGATTTCTTATTTCCTTACCTCAACTCAAATCAGTGCTATTTTTACAATCTGTTAGTGACCGTTTTAGGAAAATTGTAGTGGATGAGTTGTTTTTACAAAATAATTACTTATGTAGACAAATTTTAAAGTATTTTCATTCATAATCATTAATAAAGTTTAATGTGGTATTGTAAATACTTACGAATTCAGTATTATGTATTATAAATACTAATATAGTATACTCAATGACTATATTTGCTATCTTTTTTTAAATTGACCATATTTGTAATTATTTTCTAGATTTGACTAATCTCGTAGGTTTTCCCACGTTTTTTAAGATGGAGGCAATTGGTTATTACTTTTAGTGCGTGGTAGAATTGACGTCGTTTTTCGAATTTTTCATTTCCGATTATAGTTATACACTCTGTTTATCATCCCTATGGTTTTAGTGAATAGAACTGAGGATGAAAAGGCCTGGAAAATGGCCTTAGCTAATAGGCTTCTTCGCTCAAAAGGTCTTAACTTTTATTTAAGAGGGATTTTCTCATCTGCTCAATGTAAAAGTAAAAATGCTGTTCAACTGAAAGAATATGCTAAAAATACATTATACTCTCATGATTTAGCAGTGTTTTCTGCGCTCTTCAAGTGCTGCTTAAAAATTTGATGTTCTTTTGGGTCTTTTTCTTATGCACATCTAAATTTGTGTTCAAGTTTCTATTTGGTTCCTATTTTTAAAATTAAACATTTTTTATCTTTTGACATTTCAAAAATGCTCTTTTTTTTATATATACAAAAATGCTCATTTTTAGTCGTGGTATATTTTCGCATCAAGACTAAAATGACATTATGTTATGTAACTAGGGATTTTATCATTTCAAGGACTAAAACCGAGCATTATTGAAATGTTGAGAGGAAAAATGTGATTTTGAATTGATTTTATGTTTAGGAGTTTGAAGATATGCTGAAATTGCTTTCACACCGCACAATGTAACATCTTATCTCATTTGTATAACCGGATTGATAAACTCATTGCTATTCTTAGCTGGGTTTGACATGTTACCATTCGTCTGATAGTTTCTTGGAACTATGAAATTGGATGTTTCTGTGACTAACTATATATATATCTTGTAGGTGTTGTGAAATCCCAGAGATCATTTTGGCGTCTCAAAACTATAACCGACTTCTTTTGGGCCATTGTAAACGTTATCGGTGTGTTTTTTACCACCTTGTTCTCGGTAAGTTGTTCTTTGTTGCACTGAGAATAATGTTAGGCATTCAGAACTGTCATCATGGGATGGAGGAAAGATTAAGTTTTCGTCCTTCTTTCTTTCTAGATGGAAAAGTCAGAGGCATATAGAAAAGGAGCTGGTTCTGGCAAGAAATGGGATGGTGGGGGCCCTGGAGGTCCCGGGTCGGGGCCTTATGGTGGTCGTCCACCCAGTCGACCTCGTGGTCTCGATAACGTTCGAGGGATTGATCATAGTAAGTTGAATACTAGTTTTGGAAAGAAAAAAAATCCCTTTTTTTTCGTTTTGATTTATTTACTGATATGCAATCTGAACCTATTGCAACCAGGTTCATTACCAGCCTGTGGGTCGTGCTGCGGCTAAGTTTTTGGCGGCTCCATGCTGCATTTACATAAAGCTGTGTAGAAAATGTTATTTTCAATTCAAAATCGTGGATGTTCTTTTTTTTTTTTTTGAAAAACAAAATCGTGGATGTTATCTGTGGGGTTCTCTCGTCATCTTTTGGCGTATCTTTTAATTGCAAAATAACTACAAATATTTATCAATAAATTATATAAATTAATATCTTTAATTTAA ATAGCTATAAAATTAGAGGTTGGAATTCTGTTCATTAAATATTATTGTATAAAAAAAAAAATCAAAATTCGTGCAAATTTGTAGTTGACCCAAAAACCAAGAGGAACGGTGGTAGTTCGACCTCTGCCCTTTGAACATCGCTTTTCTTTTTCTTCGACTCCGAGAAGGCTCTGGAAAGTCTCCCATGGCGTACGTCGAACGAGGTGTTGTGAAATCCCAGAGATCATTTTGGCGTCTCAAAACTATAACCGACTTCTTTTGGGCCATTGTAAACGTTATCGGTGTGTTTTTTACCACCTTGTTCTCGATGGAAAAGTCAGAGGCATATAGAAAAGGAGCTGGTTCTGGCAAGAAATGGGATGGTGGGGGCCCTGGAGGTCCCGGGTCGGGGCCTTATGGTGGTCGTCCACCCAGTCGACCTCGTGGTCTCGATAACGTTCGAGGGATTGATCATAGTTCATTACCAGCCTGTGGGTCGTGCTGCGGCTAAGTTTTTGGCGGCTCCATGCTGCATTTACATAAAGCTGTGTAGAAAATGTTATTTTCAATTCAAAATCGTGGATGTTCTTTTTTTTTTTTTTGAAAAACAAAATCGTGGATGTTATCTGTGGGGTTCTCTCGTCATCTTTTGGCGTATCTTTTAATTGCAAAATAACTACAAATATTTATCAATAAATTATATAAATTAATATCTTTAATTTAA ATGGCGTACGTCGAACGAGGTGTTGTGAAATCCCAGAGATCATTTTGGCGTCTCAAAACTATAACCGACTTCTTTTGGGCCATTGTAAACGTTATCGGTGTGTTTTTTACCACCTTGTTCTCGATGGAAAAGTCAGAGGCATATAGAAAAGGAGCTGGTTCTGGCAAGAAATGGGATGGTGGGGGCCCTGGAGGTCCCGGGTCGGGGCCTTATGGTGGTCGTCCACCCAGTCGACCTCGTGGTCTCGATAACGTTCGAGGGATTGATCATAGTTCATTACCAGCCTGTGGGTCGTGCTGCGGCTAA MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGAGSGKKWDGGGPGGPGSGPYGGRPPSRPRGLDNVRGIDHSSLPACGSCCG Homology
BLAST of Sed0001868 vs. NCBI nr
Match: XP_004140863.1 (selenoprotein K isoform X1 [Cucumis sativus]) HSP 1 Score: 200.7 bits (509), Expect = 6.1e-48 Identity = 97/101 (96.04%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Sed0001868 vs. NCBI nr
Match: XP_022964558.1 (selenoprotein K-like [Cucurbita moschata] >XP_022964567.1 selenoprotein K-like [Cucurbita moschata] >XP_022989819.1 selenoprotein K [Cucurbita maxima] >XP_023516420.1 selenoprotein K-like [Cucurbita pepo subsp. pepo] >KAG6602082.1 Selenoprotein K, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 200.3 bits (508), Expect = 8.0e-48 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Sed0001868 vs. NCBI nr
Match: XP_008445670.1 (PREDICTED: selenoprotein K [Cucumis melo]) HSP 1 Score: 199.9 bits (507), Expect = 1.0e-47 Identity = 95/101 (94.06%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Sed0001868 vs. NCBI nr
Match: XP_022993311.1 (selenoprotein K-like [Cucurbita maxima]) HSP 1 Score: 198.0 bits (502), Expect = 4.0e-47 Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Sed0001868 vs. NCBI nr
Match: XP_022938384.1 (selenoprotein K-like [Cucurbita moschata] >XP_023551149.1 selenoprotein K-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 195.7 bits (496), Expect = 2.0e-46 Identity = 96/102 (94.12%), Postives = 98/102 (96.08%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy Swiss-Prot
Match: Q9Y6D0 (Selenoprotein K OS=Homo sapiens OX=9606 GN=SELENOK PE=1 SV=3) HSP 1 Score: 48.1 bits (113), Expect = 6.7e-05 Identity = 32/89 (35.96%), Postives = 43/89 (48.31%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy Swiss-Prot
Match: Q4R8M1 (Selenoprotein K OS=Macaca fascicularis OX=9541 GN=SELENOK PE=3 SV=3) HSP 1 Score: 48.1 bits (113), Expect = 6.7e-05 Identity = 32/89 (35.96%), Postives = 43/89 (48.31%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy Swiss-Prot
Match: Q32PE3 (Selenoprotein K OS=Bos taurus OX=9913 GN=SELENOK PE=3 SV=3) HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04 Identity = 30/89 (33.71%), Postives = 43/89 (48.31%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy Swiss-Prot
Match: Q2EN82 (Selenoprotein K OS=Sus scrofa OX=9823 GN=SELENOK PE=3 SV=3) HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04 Identity = 31/89 (34.83%), Postives = 42/89 (47.19%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy Swiss-Prot
Match: P59798 (Selenoprotein K OS=Rattus norvegicus OX=10116 GN=Selenok PE=3 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04 Identity = 32/89 (35.96%), Postives = 41/89 (46.07%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy TrEMBL
Match: A0A0A0KDW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040550 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.0e-48 Identity = 97/101 (96.04%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy TrEMBL
Match: A0A6J1HI52 (selenoprotein K-like OS=Cucurbita moschata OX=3662 GN=LOC111464545 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.9e-48 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy TrEMBL
Match: A0A6J1JQF6 (selenoprotein K OS=Cucurbita maxima OX=3661 GN=LOC111486892 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.9e-48 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy TrEMBL
Match: A0A1S3BE45 (selenoprotein K OS=Cucumis melo OX=3656 GN=LOC103488629 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.1e-48 Identity = 95/101 (94.06%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Sed0001868 vs. ExPASy TrEMBL
Match: A0A6J1JVZ4 (selenoprotein K-like OS=Cucurbita maxima OX=3661 GN=LOC111489356 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.9e-47 Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Sed0001868 vs. TAIR 10
Match: AT4G08230.1 (glycine-rich protein ) HSP 1 Score: 122.9 bits (307), Expect = 1.5e-28 Identity = 66/113 (58.41%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of Sed0001868 vs. TAIR 10
Match: AT4G08230.2 (glycine-rich protein ) HSP 1 Score: 67.8 bits (164), Expect = 5.8e-12 Identity = 39/72 (54.17%), Postives = 45/72 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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