Sed0000962 (gene) Chayote v1

Overview


Name	Sed0000962
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein LURP-one-related 4-like
Location	LG05: 6346153 .. 6347128 (+)
RNA-Seq Expression	Sed0000962
Synteny	Sed0000962

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCTTCTTTTCTCTTACATTTCAAATGGCCAAAGTGTACCCCCAAACAGCGCCGTCGTCTACGTCGTCATCTCCGTCGTGTTCATCGCAGTCTTCCGTAACAGAAACATTCACAATCTGGATGAAATCTCTGATTTACCACACAAATGGCTGCACCGTCTTCGATTCCAACGGCGATATCGTCTACAGAGTCGATAACTACGATCGAAAATGCCGCCGCGAAGTTTTCCTCATGGATCTAAGAGGAAACGTCCTCTTCACCATCAGAAAACAGGTAAGCCAAAAAACAGCGGTTTCCAAGAGTTTCTGCTCTGATTCCGATGTTAAATCGTCGATTTCTGTTGAATTAATCGTAGATCTGGATCAATTTGTGCAGAGATTTTCGATTCTCGGAGGATGGAAAGGATATCGAATGATCGAATCGGAGAGAAGTAAGAGCCCTAGTTTCGGAGTGAGGAAACTGTACAGATCGGGATCGAGAAATCATCAATCGATTTGTGAAATTACCGTAGGATTTGATCGGTTTTCGCTGGTGAAAATGGACGGAAAGTTAGCTTTTAGAATCATGAACATCAATGGAGAAGTAGTTGCAGAGGTTAGTGTGAAAACTGAATCGAATCTGATTTTCTTTCGTTTTCTCGGCTGATTTTCCGTCGTGCCAAACAGATCATTCCAATAGTTTTTGAAATTTTGATTTTTTGATTTTGATTTTTTCAGGCGAAAAGAAAAGTTAGTTCGAACGGAATTCAATTGGGAGATGATGTTTTGAGTTTGAATGCAAATTCTCAGATTGAAAGATCTCTGCTTATGGCATTGGTTACGGTTTATGGCTTAATCCGTCGCCAAATGTGAATTAACATTCACATATTAATTTTTTGTTTTATTTTTCTGATGTGTATAGAACTTTATAGATTTTGGTTTCTTATGATAAGTTTTGGGTTTATTGGTAAAGGATTGTTGTAGAAATTACAGAGG

mRNA sequence

AACCCTTCTTTTCTCTTACATTTCAAATGGCCAAAGTGTACCCCCAAACAGCGCCGTCGTCTACGTCGTCATCTCCGTCGTGTTCATCGCAGTCTTCCGTAACAGAAACATTCACAATCTGGATGAAATCTCTGATTTACCACACAAATGGCTGCACCGTCTTCGATTCCAACGGCGATATCGTCTACAGAGTCGATAACTACGATCGAAAATGCCGCCGCGAAGTTTTCCTCATGGATCTAAGAGGAAACGTCCTCTTCACCATCAGAAAACAGAGATTTTCGATTCTCGGAGGATGGAAAGGATATCGAATGATCGAATCGGAGAGAAGTAAGAGCCCTAGTTTCGGAGTGAGGAAACTGTACAGATCGGGATCGAGAAATCATCAATCGATTTGTGAAATTACCGTAGGATTTGATCGGTTTTCGCTGGTGAAAATGGACGGAAAGTTAGCTTTTAGAATCATGAACATCAATGGAGAAGTAGTTGCAGAGGCGAAAAGAAAAGTTAGTTCGAACGGAATTCAATTGGGAGATGATGTTTTGAGTTTGAATGCAAATTCTCAGATTGAAAGATCTCTGCTTATGGCATTGGTTACGGTTTATGGCTTAATCCGTCGCCAAATGTGAATTAACATTCACATATTAATTTTTTGTTTTATTTTTCTGATGTGTATAGAACTTTATAGATTTTGGTTTCTTATGATAAGTTTTGGGTTTATTGGTAAAGGATTGTTGTAGAAATTACAGAGG

Coding sequence (CDS)

ATGGCCAAAGTGTACCCCCAAACAGCGCCGTCGTCTACGTCGTCATCTCCGTCGTGTTCATCGCAGTCTTCCGTAACAGAAACATTCACAATCTGGATGAAATCTCTGATTTACCACACAAATGGCTGCACCGTCTTCGATTCCAACGGCGATATCGTCTACAGAGTCGATAACTACGATCGAAAATGCCGCCGCGAAGTTTTCCTCATGGATCTAAGAGGAAACGTCCTCTTCACCATCAGAAAACAGAGATTTTCGATTCTCGGAGGATGGAAAGGATATCGAATGATCGAATCGGAGAGAAGTAAGAGCCCTAGTTTCGGAGTGAGGAAACTGTACAGATCGGGATCGAGAAATCATCAATCGATTTGTGAAATTACCGTAGGATTTGATCGGTTTTCGCTGGTGAAAATGGACGGAAAGTTAGCTTTTAGAATCATGAACATCAATGGAGAAGTAGTTGCAGAGGCGAAAAGAAAAGTTAGTTCGAACGGAATTCAATTGGGAGATGATGTTTTGAGTTTGAATGCAAATTCTCAGATTGAAAGATCTCTGCTTATGGCATTGGTTACGGTTTATGGCTTAATCCGTCGCCAAATGTGA

Protein sequence

MAKVYPQTAPSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYDRKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGSRNHQSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNANSQIERSLLMALVTVYGLIRRQM

Homology

[Close]

BLAST of Sed0000962 vs. NCBI nr
Match: KAG7036053.1 (Protein LURP-one-related 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 175/200 (87.50%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MAKVYPQTAPSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYD 60
           MAKVYPQTA S +SSS S SS    TETFTIWMKSLIYHTNGCTV+DSNGDIVYRVDNY+
Sbjct: 1   MAKVYPQTAQSPSSSS-SSSSLCYETETFTIWMKSLIYHTNGCTVYDSNGDIVYRVDNYN 60

Query: 61  RKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGSRNH 120
           RKCRREVFLMDLRGNVLFTIRK +FSILGGW+GYR I+SERS SPSF V+KLYRSGSRN 
Sbjct: 61  RKCRREVFLMDLRGNVLFTIRKMKFSILGGWEGYRWIDSERSTSPSFRVKKLYRSGSRN- 120

Query: 121 QSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNANSQ 180
           QS+CEITVGF+RFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGI LGDDVLSLNANSQ
Sbjct: 121 QSVCEITVGFERFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGILLGDDVLSLNANSQ 180

Query: 181 IERSLLMALVTVYGLIRRQM 201
           IERSL+MALV+VYGLIRRQM
Sbjct: 181 IERSLVMALVSVYGLIRRQM 198

[Close]

BLAST of Sed0000962 vs. NCBI nr
Match: XP_022958399.1 (protein LURP-one-related 4-like [Cucurbita moschata])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 175/200 (87.50%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MAKVYPQTAPSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYD 60
           MAKVYPQTA S +SSS S SS    TETFTIWMKSLIYHTNGCTV+DSNGDIVYRVDNY+
Sbjct: 1   MAKVYPQTAQSPSSSS-SSSSLCYETETFTIWMKSLIYHTNGCTVYDSNGDIVYRVDNYN 60

Query: 61  RKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGSRNH 120
           RKCRREVFLMDLRGNVLFTIRK +FSILGGW+GYR I+SERS SPSF V+KLYRSGSRN 
Sbjct: 61  RKCRREVFLMDLRGNVLFTIRKMKFSILGGWEGYRWIDSERSTSPSFRVKKLYRSGSRN- 120

Query: 121 QSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNANSQ 180
           QS+CEITVGF+RFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGI LGDDVLSLNANSQ
Sbjct: 121 QSVCEITVGFERFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGILLGDDVLSLNANSQ 180

Query: 181 IERSLLMALVTVYGLIRRQM 201
           IERSL+MALV+VYGLIRRQM
Sbjct: 181 IERSLVMALVSVYGLIRRQM 198

[Close]

BLAST of Sed0000962 vs. NCBI nr
Match: XP_022995803.1 (protein LURP-one-related 4-like [Cucurbita maxima] >KAG6606107.1 Protein LURP-one-related 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 175/202 (86.63%), Postives = 186/202 (92.08%), Query Frame = 0


Query: 1   MAKVYPQTA--PSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDN 60
           MAKVYPQTA  PSS+SSS  C      TETFTIWMKSLIYHTNGCTV+DSNGDIVYRVDN
Sbjct: 1   MAKVYPQTAQSPSSSSSSSLCYE----TETFTIWMKSLIYHTNGCTVYDSNGDIVYRVDN 60

Query: 61  YDRKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGSR 120
           Y+RKCRREVFLMDLRGNVLFTIRK +FSILGGW+GYR I+SERS SPSF V+KLYRSGSR
Sbjct: 61  YNRKCRREVFLMDLRGNVLFTIRKMKFSILGGWEGYRWIDSERSTSPSFRVKKLYRSGSR 120

Query: 121 NHQSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNAN 180
           N QS+CEITVGF+RFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGI LGDDVLSLNAN
Sbjct: 121 N-QSVCEITVGFERFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGILLGDDVLSLNAN 180

Query: 181 SQIERSLLMALVTVYGLIRRQM 201
           SQIERSL+MALV+VYGLIRRQM
Sbjct: 181 SQIERSLVMALVSVYGLIRRQM 197

[Close]

BLAST of Sed0000962 vs. NCBI nr
Match: XP_023551055.1 (protein LURP-one-related 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.5 bits (833), Expect = 3.3e-85
Identity = 173/202 (85.64%), Postives = 184/202 (91.09%), Query Frame = 0


Query: 1   MAKVYPQTAPS-STSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNY 60
           MAKVYPQ+APS S SSSPS S   S TETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNY
Sbjct: 1   MAKVYPQSAPSPSPSSSPSSSPLCSETETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNY 60

Query: 61  DRKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGSR- 120
           DRKC REVFLMDLRG VLFTIRK++FS L GW+GYR IESERS +PSF VRKLYRSGSR 
Sbjct: 61  DRKCSREVFLMDLRGKVLFTIRKKKFSFLRGWEGYRWIESERSMNPSFRVRKLYRSGSRK 120

Query: 121 NHQSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNAN 180
            ++SICEI+VGF+RFSLVKMDGKLAFRI+NINGEVVAEAKRKVSSNGI LGDDVLSLNA 
Sbjct: 121 RNESICEISVGFERFSLVKMDGKLAFRIININGEVVAEAKRKVSSNGILLGDDVLSLNAT 180

Query: 181 SQIERSLLMALVTVYGLIRRQM 201
           SQIERSL+MALVTVYGLIRRQM
Sbjct: 181 SQIERSLIMALVTVYGLIRRQM 202

[Close]

BLAST of Sed0000962 vs. NCBI nr
Match: XP_008437245.1 (PREDICTED: protein LURP-one-related 4 [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 4.3e-85
Identity = 172/203 (84.73%), Postives = 183/203 (90.15%), Query Frame = 0


Query: 1   MAKVYPQTAPS-STSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNY 60
           MAKVYPQTA S STSSS S SS  S TETFTIWMKSLIYHTNGCT+FDSNGDIVYRVDNY
Sbjct: 1   MAKVYPQTALSPSTSSSSSSSSLGSETETFTIWMKSLIYHTNGCTIFDSNGDIVYRVDNY 60

Query: 61  DRKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGS-- 120
           DRKC  EVFLMDLRG VLFTIRK++FSILGGW+GYR +ESERSK PSFGV+KLYRSGS  
Sbjct: 61  DRKCSSEVFLMDLRGKVLFTIRKKKFSILGGWEGYRWMESERSKKPSFGVKKLYRSGSRK 120

Query: 121 RNHQSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNA 180
           RN  ++CEI VGF+RFSLVKMDGKLAFRI+NINGEVVAEAKRKVS NGI LGDDVLSLNA
Sbjct: 121 RNQSAVCEINVGFERFSLVKMDGKLAFRIININGEVVAEAKRKVSWNGILLGDDVLSLNA 180

Query: 181 NSQIERSLLMALVTVYGLIRRQM 201
           NSQIE SL+MALVTVYGLIRRQM
Sbjct: 181 NSQIETSLVMALVTVYGLIRRQM 203

[Close]

BLAST of Sed0000962 vs. ExPASy Swiss-Prot
Match: Q9SH27 (Protein LURP-one-related 4 OS=Arabidopsis thaliana OX=3702 GN=At1g63410 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-38
Identity = 91/197 (46.19%), Postives = 128/197 (64.97%), Query Frame = 0


Query: 1   MAKVYPQTAPSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYD 60
           MA+V+PQ A     SSP  S++    ETFT+WMKSL+Y TNG TV++SNG+I YRV+NYD
Sbjct: 1   MARVFPQAA----ISSPYMSTE---RETFTVWMKSLVYQTNGLTVYNSNGEITYRVENYD 60

Query: 61  RKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGSRNH 120
            KC  EV +MDL GN+LFTIRK++  + G W  YR   S  S        ++ RS  R+ 
Sbjct: 61  -KCSNEVHIMDLHGNILFTIRKKKLWLFGSWYVYRECGSFTSTEEVKPCARIKRSSIRDG 120

Query: 121 QSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNANSQ 180
                     + F +++ D K AF+I++I+G ++A+ K K SSNGI LG+DVL+L    +
Sbjct: 121 DWEVRDETN-EVFWILRFDPKFAFQIIDIHGNIIAQVKPKQSSNGITLGEDVLTLEVKPR 180

Query: 181 IERSLLMALVTVYGLIR 198
           ++ SL++ LVTVYGLI+
Sbjct: 181 VDHSLVVTLVTVYGLIK 188

[Close]

BLAST of Sed0000962 vs. ExPASy Swiss-Prot
Match: Q9LUM1 (Protein LURP-one-related 11 OS=Arabidopsis thaliana OX=3702 GN=At3g14260 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33
Identity = 83/206 (40.29%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 1   MAKVYPQTAPSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYD 60
           M K++P    S      S    ++  E+FTIWMKSL+++TNGCTVFDS G+I+YRVDNY+
Sbjct: 23  MVKIHPDLTTSGAGEETSSPYLTTEQESFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNYN 82

Query: 61  RKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIES---ERSKSPSFGVR-KLYRSG 120
            K  REV+LMDL G+VLFT+R+Q+F +   W+GYR   +     +K   F V+  +++  
Sbjct: 83  SKSCREVYLMDLSGHVLFTLRRQKFGLFKTWEGYRSSSATVESTTKLEYFRVKNNVFQVP 142

Query: 121 SRNHQSICEITVGFDR------FSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGD 180
           +++  S   +  G  R      + +V     LA  I +  G+++AE KRK S NG++LGD
Sbjct: 143 NKDSSSSYRVNAGSCRNDEQYCYKMVTRGSSLA--IEDNCGKLLAEVKRKQSINGLKLGD 202

Query: 181 DVLSLNANSQIERSLLMALVTVYGLI 197
           DVL++   SQ++ S ++ LV  + LI
Sbjct: 203 DVLTMMVESQVDHSFIIGLVLAHSLI 226

[Close]

BLAST of Sed0000962 vs. ExPASy Swiss-Prot
Match: Q8LG32 (Protein LURP-one-related 2 OS=Arabidopsis thaliana OX=3702 GN=At1g53870 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 9.4e-27
Identity = 75/208 (36.06%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MAKVYPQTA---PSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVD 60
           M K+YP  A                ++  E FTIWMKSL++++ GCTVFDS G+++YRVD
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72

Query: 61  NYDRKC-RREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSG 120
           NYD K    EV+ MDL G +LFT+R+++      W+GY       S    F +RK+++  
Sbjct: 73  NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGY------NSTGTRFRLRKIFKIL 132

Query: 121 SRNHQSICEITVGF-----DRFSLVKMDGK-LAFRIMNINGEVVAEAKRKVSS-NGIQLG 180
            R   S  ++ +G      D+ S  K+  +   F I + +G ++AE K K+S  +G+ LG
Sbjct: 133 PRESSSSYKVVMGSRIVDGDQQSCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLG 192

Query: 181 DDVLSLNANSQIERSLLMALVTVYGLIR 198
           DDVL++    Q++ SL+M +V  Y L +
Sbjct: 193 DDVLTMMVEPQLDHSLIMGIVIAYKLTK 214

[Close]

BLAST of Sed0000962 vs. ExPASy Swiss-Prot
Match: Q67XV7 (Protein LURP-one-related 3 OS=Arabidopsis thaliana OX=3702 GN=At1g53890 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 9.4e-27
Identity = 75/208 (36.06%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MAKVYPQTA---PSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVD 60
           M K+YP  A                ++  E FTIWMKSL++++ GCTVFDS G+++YRVD
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72

Query: 61  NYDRKC-RREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSG 120
           NYD K    EV+ MDL G +LFT+R+++      W+GY       S    F +RK+++  
Sbjct: 73  NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGY------NSTGTRFRLRKIFKIL 132

Query: 121 SRNHQSICEITVGF-----DRFSLVKMDGK-LAFRIMNINGEVVAEAKRKVSS-NGIQLG 180
            R   S  ++ +G      D+ S  K+  +   F I + +G ++AE K K+S  +G+ LG
Sbjct: 133 PRESSSSYKVVMGSRIVDGDQQSCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLG 192

Query: 181 DDVLSLNANSQIERSLLMALVTVYGLIR 198
           DDVL++    Q++ SL+M +V  Y L +
Sbjct: 193 DDVLTMMVEPQLDHSLIMGIVIAYKLTK 214

[Close]

BLAST of Sed0000962 vs. ExPASy Swiss-Prot
Match: A0MFL4 (Protein LURP-one-related 17 OS=Arabidopsis thaliana OX=3702 GN=At5g41590 PE=2 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 65/202 (32.18%), Postives = 100/202 (49.50%), Query Frame = 0


Query: 4   VYPQTAPSSTSSSPSCSSQ--SSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYDR 63
           V+ + APSST S+ S ++        T T+W KSL+    G TV DSNGD++YRVDNY R
Sbjct: 12  VHGEDAPSSTESTVSVAAADIGGACTTLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYAR 71

Query: 64  KCRREVFLMDLRGNVLFTI-RKQRFSILGGWKGYRMI----ESERSKSPSFGVRKLYRSG 123
               E+ LMD  GN L  + R ++ +++  W  Y       E++  K P++ +RK  +  
Sbjct: 72  TRPEELILMDKDGNSLLLMHRTKKITLVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMN 131

Query: 124 SRNHQSICEITV---GFDRFSLVKMDGKLAFRIMNI-----NGEVVAEAKRKVSSNGIQL 183
             + +S     V    FD+ +   + G    +   I     N  VV   +++V + G++ 
Sbjct: 132 ILSTKSDILAYVYSGSFDKKNSYIIKGSYRCKSCKIVHVPLNKTVVEIKRKEVRTKGVRF 191

Query: 184 GDDVLSLNANSQIERSLLMALV 191
           G DV  L  N   +  L MALV
Sbjct: 192 GSDVFDLVVNPGFDTGLAMALV 213

[Close]

BLAST of Sed0000962 vs. ExPASy TrEMBL
Match: A0A6J1H4Z8 (protein LURP-one-related 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459635 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87
Identity = 175/200 (87.50%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MAKVYPQTAPSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYD 60
           MAKVYPQTA S +SSS S SS    TETFTIWMKSLIYHTNGCTV+DSNGDIVYRVDNY+
Sbjct: 1   MAKVYPQTAQSPSSSS-SSSSLCYETETFTIWMKSLIYHTNGCTVYDSNGDIVYRVDNYN 60

Query: 61  RKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGSRNH 120
           RKCRREVFLMDLRGNVLFTIRK +FSILGGW+GYR I+SERS SPSF V+KLYRSGSRN 
Sbjct: 61  RKCRREVFLMDLRGNVLFTIRKMKFSILGGWEGYRWIDSERSTSPSFRVKKLYRSGSRN- 120

Query: 121 QSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNANSQ 180
           QS+CEITVGF+RFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGI LGDDVLSLNANSQ
Sbjct: 121 QSVCEITVGFERFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGILLGDDVLSLNANSQ 180

Query: 181 IERSLLMALVTVYGLIRRQM 201
           IERSL+MALV+VYGLIRRQM
Sbjct: 181 IERSLVMALVSVYGLIRRQM 198

[Close]

BLAST of Sed0000962 vs. ExPASy TrEMBL
Match: A0A6J1K929 (protein LURP-one-related 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491230 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.4e-87
Identity = 175/202 (86.63%), Postives = 186/202 (92.08%), Query Frame = 0


Query: 1   MAKVYPQTA--PSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDN 60
           MAKVYPQTA  PSS+SSS  C      TETFTIWMKSLIYHTNGCTV+DSNGDIVYRVDN
Sbjct: 1   MAKVYPQTAQSPSSSSSSSLCYE----TETFTIWMKSLIYHTNGCTVYDSNGDIVYRVDN 60

Query: 61  YDRKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGSR 120
           Y+RKCRREVFLMDLRGNVLFTIRK +FSILGGW+GYR I+SERS SPSF V+KLYRSGSR
Sbjct: 61  YNRKCRREVFLMDLRGNVLFTIRKMKFSILGGWEGYRWIDSERSTSPSFRVKKLYRSGSR 120

Query: 121 NHQSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNAN 180
           N QS+CEITVGF+RFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGI LGDDVLSLNAN
Sbjct: 121 N-QSVCEITVGFERFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGILLGDDVLSLNAN 180

Query: 181 SQIERSLLMALVTVYGLIRRQM 201
           SQIERSL+MALV+VYGLIRRQM
Sbjct: 181 SQIERSLVMALVSVYGLIRRQM 197

[Close]

BLAST of Sed0000962 vs. ExPASy TrEMBL
Match: A0A1S3AT73 (protein LURP-one-related 4 OS=Cucumis melo OX=3656 GN=LOC103482731 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.1e-85
Identity = 172/203 (84.73%), Postives = 183/203 (90.15%), Query Frame = 0


Query: 1   MAKVYPQTAPS-STSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNY 60
           MAKVYPQTA S STSSS S SS  S TETFTIWMKSLIYHTNGCT+FDSNGDIVYRVDNY
Sbjct: 1   MAKVYPQTALSPSTSSSSSSSSLGSETETFTIWMKSLIYHTNGCTIFDSNGDIVYRVDNY 60

Query: 61  DRKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGS-- 120
           DRKC  EVFLMDLRG VLFTIRK++FSILGGW+GYR +ESERSK PSFGV+KLYRSGS  
Sbjct: 61  DRKCSSEVFLMDLRGKVLFTIRKKKFSILGGWEGYRWMESERSKKPSFGVKKLYRSGSRK 120

Query: 121 RNHQSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNA 180
           RN  ++CEI VGF+RFSLVKMDGKLAFRI+NINGEVVAEAKRKVS NGI LGDDVLSLNA
Sbjct: 121 RNQSAVCEINVGFERFSLVKMDGKLAFRIININGEVVAEAKRKVSWNGILLGDDVLSLNA 180

Query: 181 NSQIERSLLMALVTVYGLIRRQM 201
           NSQIE SL+MALVTVYGLIRRQM
Sbjct: 181 NSQIETSLVMALVTVYGLIRRQM 203

[Close]

BLAST of Sed0000962 vs. ExPASy TrEMBL
Match: A0A6J1ELI2 (protein LURP-one-related 4-like OS=Cucurbita moschata OX=3662 GN=LOC111435723 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.7e-85
Identity = 173/204 (84.80%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 1   MAKVYPQTAPS---STSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVD 60
           MAKVYPQ+APS   S SSSPS S   S TETFTIWMKSLIYHTNGCTVFDSNGDIVYRVD
Sbjct: 1   MAKVYPQSAPSPSPSPSSSPSSSPLCSETETFTIWMKSLIYHTNGCTVFDSNGDIVYRVD 60

Query: 61  NYDRKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGS 120
           NYDRKC REVFLMDLRG VLFTIRK++FS L GW+GYR IESERS +PSF VRKLYRSGS
Sbjct: 61  NYDRKCSREVFLMDLRGKVLFTIRKKKFSFLRGWEGYRWIESERSMNPSFRVRKLYRSGS 120

Query: 121 R-NHQSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLN 180
           R  ++SICEI+VGF+RFSLVKMDGKLAFRI+NINGEVVAEAKRKVSSNGI LGDDVLSLN
Sbjct: 121 RKRNESICEISVGFERFSLVKMDGKLAFRIININGEVVAEAKRKVSSNGILLGDDVLSLN 180

Query: 181 ANSQIERSLLMALVTVYGLIRRQM 201
           A SQIERSL+MALVTVYGLIRRQM
Sbjct: 181 ATSQIERSLIMALVTVYGLIRRQM 204

[Close]

BLAST of Sed0000962 vs. ExPASy TrEMBL
Match: A0A5A7TMZ0 (Protein LURP-one-related 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002750 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.9e-84
Identity = 169/202 (83.66%), Postives = 182/202 (90.10%), Query Frame = 0


Query: 1   MAKVYPQTAPSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYD 60
           MAKVYPQTA S ++SS S SS  S TETFTIWMKSLIYHTNGCT+FDSNGDIVYRVDNYD
Sbjct: 1   MAKVYPQTALSPSTSS-SSSSLGSETETFTIWMKSLIYHTNGCTIFDSNGDIVYRVDNYD 60

Query: 61  RKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGS--R 120
           RKC  EVFLMDLRG VLFTIRK++FSILGGW+GYR +ESERSK PSFGV+KLYRSGS  R
Sbjct: 61  RKCSSEVFLMDLRGKVLFTIRKKKFSILGGWEGYRWMESERSKKPSFGVKKLYRSGSRKR 120

Query: 121 NHQSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNAN 180
           N  ++CEI VGF+RFSLVKMDGKLAFRI+NINGEVVAEAKRKVS NGI LGDDVLSLNAN
Sbjct: 121 NQSAVCEINVGFERFSLVKMDGKLAFRIININGEVVAEAKRKVSWNGILLGDDVLSLNAN 180

Query: 181 SQIERSLLMALVTVYGLIRRQM 201
           SQIE SL+MALVTVYGLIRRQM
Sbjct: 181 SQIETSLVMALVTVYGLIRRQM 201

[Close]

BLAST of Sed0000962 vs. TAIR 10
Match: AT1G63410.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-37
Identity = 87/198 (43.94%), Postives = 127/198 (64.14%), Query Frame = 0


Query: 1   MAKVYPQTAPSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYD 60
           MA+V+PQ A     SSP  S++    ETFT+WMKSL+Y TNG TV++SNG+I YRV+NYD
Sbjct: 1   MARVFPQAA----ISSPYMSTE---RETFTVWMKSLVYQTNGLTVYNSNGEITYRVENYD 60

Query: 61  RKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGSRNH 120
            KC  EV +MDL GN+LFTIRK++  + G W  YR   S  S        ++ RS  R+ 
Sbjct: 61  -KCSNEVHIMDLHGNILFTIRKKKLWLFGSWYVYRECGSFTSTEEVKPCARIKRSSIRDG 120

Query: 121 QSICEITVGFDRFSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGDDVLSLNANSQ 180
                     + F +++ D K AF+I++I+G ++A+ K K SSNGI LG+DVL+L    +
Sbjct: 121 DWEVRDETN-EVFWILRFDPKFAFQIIDIHGNIIAQVKPKQSSNGITLGEDVLTLEVKPR 180

Query: 181 IERSLLMALVTVYGLIRR 199
           ++ SL++ LVT+ G +++
Sbjct: 181 VDHSLVVTLVTIDGEVKQ 189

[Close]

BLAST of Sed0000962 vs. TAIR 10
Match: AT3G14260.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 144.4 bits (363), Expect = 9.6e-35
Identity = 83/206 (40.29%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 1   MAKVYPQTAPSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVDNYD 60
           M K++P    S      S    ++  E+FTIWMKSL+++TNGCTVFDS G+I+YRVDNY+
Sbjct: 23  MVKIHPDLTTSGAGEETSSPYLTTEQESFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNYN 82

Query: 61  RKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIES---ERSKSPSFGVR-KLYRSG 120
            K  REV+LMDL G+VLFT+R+Q+F +   W+GYR   +     +K   F V+  +++  
Sbjct: 83  SKSCREVYLMDLSGHVLFTLRRQKFGLFKTWEGYRSSSATVESTTKLEYFRVKNNVFQVP 142

Query: 121 SRNHQSICEITVGFDR------FSLVKMDGKLAFRIMNINGEVVAEAKRKVSSNGIQLGD 180
           +++  S   +  G  R      + +V     LA  I +  G+++AE KRK S NG++LGD
Sbjct: 143 NKDSSSSYRVNAGSCRNDEQYCYKMVTRGSSLA--IEDNCGKLLAEVKRKQSINGLKLGD 202

Query: 181 DVLSLNANSQIERSLLMALVTVYGLI 197
           DVL++   SQ++ S ++ LV  + LI
Sbjct: 203 DVLTMMVESQVDHSFIIGLVLAHSLI 226

[Close]

BLAST of Sed0000962 vs. TAIR 10
Match: AT1G53890.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 121.7 bits (304), Expect = 6.7e-28
Identity = 75/208 (36.06%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MAKVYPQTA---PSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVD 60
           M K+YP  A                ++  E FTIWMKSL++++ GCTVFDS G+++YRVD
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72

Query: 61  NYDRKC-RREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSG 120
           NYD K    EV+ MDL G +LFT+R+++      W+GY       S    F +RK+++  
Sbjct: 73  NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGY------NSTGTRFRLRKIFKIL 132

Query: 121 SRNHQSICEITVGF-----DRFSLVKMDGK-LAFRIMNINGEVVAEAKRKVSS-NGIQLG 180
            R   S  ++ +G      D+ S  K+  +   F I + +G ++AE K K+S  +G+ LG
Sbjct: 133 PRESSSSYKVVMGSRIVDGDQQSCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLG 192

Query: 181 DDVLSLNANSQIERSLLMALVTVYGLIR 198
           DDVL++    Q++ SL+M +V  Y L +
Sbjct: 193 DDVLTMMVEPQLDHSLIMGIVIAYKLTK 214

[Close]

BLAST of Sed0000962 vs. TAIR 10
Match: AT1G53870.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 121.7 bits (304), Expect = 6.7e-28
Identity = 75/208 (36.06%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MAKVYPQTA---PSSTSSSPSCSSQSSVTETFTIWMKSLIYHTNGCTVFDSNGDIVYRVD 60
           M K+YP  A                ++  E FTIWMKSL++++ GCTVFDS G+++YRVD
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72

Query: 61  NYDRKC-RREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSG 120
           NYD K    EV+ MDL G +LFT+R+++      W+GY       S    F +RK+++  
Sbjct: 73  NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGY------NSTGTRFRLRKIFKIL 132

Query: 121 SRNHQSICEITVGF-----DRFSLVKMDGK-LAFRIMNINGEVVAEAKRKVSS-NGIQLG 180
            R   S  ++ +G      D+ S  K+  +   F I + +G ++AE K K+S  +G+ LG
Sbjct: 133 PRESSSSYKVVMGSRIVDGDQQSCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLG 192

Query: 181 DDVLSLNANSQIERSLLMALVTVYGLIR 198
           DDVL++    Q++ SL+M +V  Y L +
Sbjct: 193 DDVLTMMVEPQLDHSLIMGIVIAYKLTK 214

[Close]

BLAST of Sed0000962 vs. TAIR 10
Match: AT1G53880.1 (Eukaryotic translation initiation factor 2B (eIF-2B) family protein )

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-25
Identity = 72/203 (35.47%), Postives = 113/203 (55.67%), Query Frame = 0


Query: 1   MAKVYPQTA-PSSTSSSPSCSSQSSVT--ETFTIWMKSLIYHTNGCTVFDSNGDIVYRVD 60
           M K++P  A P   S     +S    T  E+FTIWM+SL++H+ GCTVFDS G+++YRVD
Sbjct: 1   MVKIHPDKAFPVDFSVGEGKTSPYLTTEKESFTIWMRSLVFHSKGCTVFDSKGNLIYRVD 60

Query: 61  NYDRKCRREVFLMDLRGNVLFTIRKQRFSILGGWKGYRMIESERSKSPSFGVRKLYRSGS 120
           NY+ K   EV+LMDL G +LFT+R+++  +   WKGY       S    F +RK ++   
Sbjct: 61  NYNSKSCSEVYLMDLYGKILFTLRQKKLGLFKSWKGY------NSTGTRFQLRKNFKILP 120

Query: 121 RNHQSICEITVGF-----DRFSLVK-MDGKLAFRIMNINGEVVAEAKRKVSS-NGIQLGD 180
           +   S  ++ +G      D  S  K +  K  F I + +G ++AE K+K S+   + LG 
Sbjct: 121 KGSSSSYKVVMGSRIVDGDHQSCYKIVKRKSVFTIEDGSGRLLAEVKKKQSNIKSLDLGK 180

Query: 181 DVLSLNANSQIERSLLMALVTVY 194
           DVL++    Q+E  +    + ++
Sbjct: 181 DVLTMMVEPQLETEIFEEFIKMW 197

The following BLAST results are available for this feature:

BLAST of Sed0000962 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036053.1	1.0e-86	87.50	Protein LURP-one-related 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022958399.1	1.0e-86	87.50	protein LURP-one-related 4-like [Cucurbita moschata]	[more]
XP_022995803.1	1.7e-86	86.63	protein LURP-one-related 4-like [Cucurbita maxima] >KAG6606107.1 Protein LURP-on...	[more]
XP_023551055.1	3.3e-85	85.64	protein LURP-one-related 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_008437245.1	4.3e-85	84.73	PREDICTED: protein LURP-one-related 4 [Cucumis melo]	[more]

BLAST of Sed0000962 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH27	3.1e-38	46.19	Protein LURP-one-related 4 OS=Arabidopsis thaliana OX=3702 GN=At1g63410 PE=3 SV=...	[more]
Q9LUM1	1.4e-33	40.29	Protein LURP-one-related 11 OS=Arabidopsis thaliana OX=3702 GN=At3g14260 PE=2 SV...	[more]
Q8LG32	9.4e-27	36.06	Protein LURP-one-related 2 OS=Arabidopsis thaliana OX=3702 GN=At1g53870 PE=2 SV=...	[more]
Q67XV7	9.4e-27	36.06	Protein LURP-one-related 3 OS=Arabidopsis thaliana OX=3702 GN=At1g53890 PE=2 SV=...	[more]
A0MFL4	1.1e-14	32.18	Protein LURP-one-related 17 OS=Arabidopsis thaliana OX=3702 GN=At5g41590 PE=2 SV...	[more]

BLAST of Sed0000962 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4Z8	4.9e-87	87.50	protein LURP-one-related 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459635 PE...	[more]
A0A6J1K929	8.4e-87	86.63	protein LURP-one-related 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491230 PE=3...	[more]
A0A1S3AT73	2.1e-85	84.73	protein LURP-one-related 4 OS=Cucumis melo OX=3656 GN=LOC103482731 PE=3 SV=1	[more]
A0A6J1ELI2	2.7e-85	84.80	protein LURP-one-related 4-like OS=Cucurbita moschata OX=3662 GN=LOC111435723 PE...	[more]
A0A5A7TMZ0	3.9e-84	83.66	Protein LURP-one-related 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Sed0000962 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63410.1	2.7e-37	43.94	Protein of unknown function (DUF567)	[more]
AT3G14260.1	9.6e-35	40.29	Protein of unknown function (DUF567)	[more]
AT1G53890.1	6.7e-28	36.06	Protein of unknown function (DUF567)	[more]
AT1G53870.1	6.7e-28	36.06	Protein of unknown function (DUF567)	[more]
AT1G53880.1	3.1e-25	35.47	Eukaryotic translation initiation factor 2B (eIF-2B) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038595	LURP-one-related superfamily	GENE3D	2.40.160.200		coord: 19..200 e-value: 1.9E-36 score: 127.4
IPR007612	LURP-one-related	PFAM	PF04525	LOR	coord: 24..192 e-value: 1.9E-39 score: 135.2
IPR007612	LURP-one-related	PANTHER	PTHR31087	FAMILY NOT NAMED	coord: 2..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31087:SF59	PROTEIN LURP-ONE-RELATED 4	coord: 2..199
IPR025659	Tubby-like, C-terminal	SUPERFAMILY	54518	Tubby C-terminal domain-like	coord: 23..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000962.1	Sed0000962.1	mRNA