Sed0000628 (gene) Chayote v1

Overview


Name	Sed0000628
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Trafficking protein particle complex subunit
Location	LG04: 42566901 .. 42572241 (-)
RNA-Seq Expression	Sed0000628
Synteny	Sed0000628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGCCATAGGCACGAAGGCCATTTGGATCTTGTAGCCCCATAGACCACAAGTCTAACACTGTTCTTCACTTTCTTTAGGCCATTTGGATCCATCATGCCTCCTGCTGGTCCTCGATCCGGCGACGCAATCTTCGCTAGCGTTGAGCGAGTGGTAAGCTTCTCAACCTCGATTCTCTCTGTGATTTGATTTGTTTCTGCTGAGAAAAATGTTATCAGATGTATCCGAATGATCTAGATGTGTGTTGTTGTTAGGTCTTGATTTCATTTCTGTTTGTGGATTACCTTCTATTGATTAAGAAGCTGAACTTGAAATCGATGTAGAATGCGGAGTTGTTTACCTTGACTTATGGAGCGACTGTTCGTCAATTGCTCACGGATCTGGAGGAGGTTGAGGAGGTCAACAAACAGCTCGATCAGATGTAAATTTACTCCAGCTTCATGTGATTTTTTAGCCATGATTTGTTTAGAATCCTGCTTTTTCCAGAGTCGACTTTTGTTTTTTGTTTGAATGATAGATGGGTCTGAATTTGATTGTTTTGTGTTGTCTTTGCTCTGTGATTTCTGTGGTTGTTCATTGGCTCTTATTCTTGCCTGGTATTGTTGGAAGCCGAATGCTTTTATATAACGAGTCCTTTCTAGTATACAAAGCTTTCTAACTTTAACTGAAAGTATTTTTTTTTTTTTTTTGTGCCTGACCTAGGTGTGGTTACTCTTGTTTCAAAAAATTACATTTTTGTTTTACATCAGTGACCACTGGGCCAGTTTACGGGTGCTTCAACTGCCACGAGACATGCGATCCCACAATATTTAAATGTCAAAGAAAATTTTTAGTAAATTAATTTTTACTAGATAGTCACCATGGATTGATCCTATTACTTCTTAATTACTTAAGGTCTTGTAGGTCACTCCACGATGGTTTTACTGAAATCATTATGCAAATCTCTGTACATTGAGGCTTAATTCTTCTCTTTGTTATTAAATGTGCTTGAATTTTAGTTTGAAAGTTTACATATTGTGCATGAGAACCACTATGGGCTGACCAAGTTGTGGTTTGGGGCACATTAAAAAAAAGGAACTTAGGGAGAATAGATCCGTACTTTATAGTGGTCACCTATGTAGGATAGTATCGAACAAGTTTATTGATAACCAATTGTTGTAGTGTCAAAATGGTTGTCCTGTGAAAAATATGCCCGAGAGTCGAGACTCGAGAGTTATGTTCTCTTATTTTGTTGGGTGTTTTTTTTTGTATGACTCTTCTTGTATTTTGTTCTTTCTTTTTCTGCACGGAAGTTGGTTTTTAATAAAAAAGTAATAGTATGCATGAGCATGACAGATACATACTTAGTACATTATTTCTTCAATACTTCATACGTTAAGTATTAAGAAGTATTTTGTGTTTGAACTTAATATCCTTGCGAAAAACAATAGATTCAGTAATCAGACTGTTTTTTCAATTGTCTTTCAGGGGCTATAATATTGGAATCAGGCTGATTGATGAGTTTCTAGCAAAATCTAATATTTCGAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTAGGTTGTAGTTGAATATAGGTGCCAAAGAATTTTATTCTTTCTGAAAGCCATCATGAGGCTGTTTTTTTTTTTTTGATAGGAAACAAAAACTTTCATTGATATTTGAAAAGTTACAACCTATCGAAACATATGTATAAGGCTATGCCATTGAGATAATAGAGTGGTTAAATCATAGCTACGAAATGGGTGGATAGAGTGACACCAATACAAGGCCAAGTATATAATAGAATCGAAAAGGGCTGGATAATCCTTGTTCTTGTGCTCCATGTTAAAAAGTCTGCCATTTCTCTCCTTCCATATACTCCAAAAGAAAGCATAGATAATGCTAAGCCAAAAAGTTTCAGCGTCCCCTTTGAAAGGATGCCCCATTAGAAGATAACAAATTAGATCGGCAGACTTGTTAGGCAAGGGGGTAGACCAGTTAAAAACGGTTAGAATATGTGCCCAAAAACCGGATGAATAGCAGCAATTTAGAAACAAATGATATTGCAATTCAGTATCAGAGCAGCACATGGAGCAAAAAGATGGTTGGAGGGCTGTCTTGGCACATCTCTTTTGGAGAATATCATTGGCGTTGATAGCTCCTCTACTAAGCATCATGAGGCTGTTGAAGTAGCTATGCCTGTCAAACCTATTTTTAGACGAGAAAAATATTAAGCCTATGCAGGAAAAGGAGAACGATTATAATATGAAAAAGTTATTTACACTTGCACCAATACATAGCATAAAAAAGAATTAAATCCAAAAAACTGTCGAAAGTAGAGAATGAATGTCTTAAAATTCTTGCATTCCTAAGTTCCAGAGACACCATAAGAATTGCCAACAAGAGTAGAGCTCTATTGGCATGGTATATAACCTAGTAATCAAGAGGTTACAGGTTCAAATCTCCCACCCCAAATGGCATGGATTAGAAATGAAAACCCTTGTTGATAGCAAGTCACAAAGCTTTCTTCACCCCATGGTAAGGATGTGCCACAAAAATGAATGCCAGGCAATCATAAATATCCCAACCAAAAGCATCAAGTATTGTGATCCAGTATCAAAAAGAAAATAAGCAACGAACAAAGAGATGTCCAAGAAACTTAGAATTTGAAGAACACATAAAACACCACGATAAAGAAATATAGGTGGATCTAATTCATATGCCTTTGCAGTCTCTCCACCCTGTTCATAGCCCCCAAACTAACTACGGTTCCACAGAAGTATTTAGTCTTCTTAGGATAAACATCTTTCCAAATTATCTCATATAGGAAGGATTAGCAACACCCAACAGACCTTTCGTGAGCGATTTCACTGTAAAAACTTTGGATTTGTCTTAGGGTCAAGACCAAGAGTCAGGTGAATTTTGATGGCAAAATGCAATGAAAAGATAAGATAAGCTTACCCATTCAGTAGCTTATGAATCATTAAAATTTCAAAGAAAAATCCCAAGCATCATTAACAACATTTCAGGAAGCAGCAACCATACAGTTAGGGCGATTAATTAGCTGATATAGCTGAGGGAAAGCCGATGTTAGAATCCCTTATTTATCCAAGAACAATGCCCAAAAAGACGTTGAAAGACCGTTACCAAGGCATCTTTGGGCACGTGTTGCAACAATATCAATAGTAGATCAAATAAACCGCCAAAGTGATTTATAAGAACCTCTCTGAATGGTAGCCCATAACAGCTTGAATACTTTAAGACAGATTGCAAAGAAGACATCCTCAATGGCTCTTTCCCCAAATATGTTCCTCCTTTGCAGCCAAATTTTTTAATCCATTAGCCACCTCTTTCTTCATTGTCCTTTTCCTTATAACGGTTGGTGTTTCATACTGAATACTTCCAATTTGGCTTGGTGCTGCCCTTAAAATATAGGCTGGTGGTTCAAGAGAGCTAAGATTTTGTGGATGAATGCTTGCAAAGCTCTTCTTTGGTTATTATGGAAAGAAAGGAACAAATTATTTTCAGATAACTCTTCCTCAAACATTTTTTATAACGAGAGTATTCAGTTTACTGCCTTCACTTTGAGTGCTTTACACAAATCTTTTTTAATACACAACTAATGCGATAGAAGTTTTGGGAAATTTAATAAAACCACCATGACAAAATGGAATCATCCGAACGGACAAAATTGAAGCTATGCACAAAGGAAATAACAGGACTAAAATGTTAATATAGTAGTCCCCAAGGGGTGGCACAGAAGTTAAAAATTTGGGTTTTGAAGGTATGCTCTCTTCAAGGTCCCAGGTTCGAGTGCCACCTATGACATTACTCCTTCGATGTCTTCCGGTGCCTGGTCTAGGGACAGGCGTGGTTACCCTTGTTTCAAAAAAAAAATGGTAATATAGTGTGACATTGACCAGACTCTTTTTCATTTGAAATGGATTTTTTTAATAGGTCGGGTTGAAAATGTTTTTGGGAGTGAATGCAACGGTGGCCAACTGGGATGCTGAAGGCACATGCTGCAGTATTGTTCTAGAAGACAATCCATTGGTAGACTTCGTTGAGCTGCCTGATACTTGTCAAGGTCTACATTACTGCAATATCTTAAGTGGAGTCATCAGAGGAGCACTTGAGATGGTGAGTTCTCTGCATCTTTATTATTATCATTCCTAATCATCATGGGTTGTTCTAAGACGTCAAATAAAAGTTTTAGAAATCATCAAAGGTTTAGAGGTTATGAGCTCAATCTATATCAGCCATCTACTCGTGCATTCATTTTTAATAAATTACCTTGACAACTAAATGCAGTAGTATCTGATGGTTGTTTCGTGAGAGTAAAACTATGATAGTTAAAAAGGCATTAGAGGATTAAGAGGGAACATATTCAATCCATGATGTCACCTACTTAGCAATATCCTGACATATTTTTTATGAATCAAATGTGATCAATAATATCTAACACAACCGACCACCATTAGTAGCTTAGTGATCAAAAGGACAATAGAAAAACCAAAAGGTGTAGGTCCATGGTAACCACTTATCTAGGTAATATTTTCCTACGTGTTCCTTTTTTTCATCCAATGTTGTAGAGTCTGGCGATGTGTCCTACGGGTATAGTCGAGTTTCTTTTGACATCCAAATGTGATTAGTAATATTAACACACAACCAACCTCGTCCCCAAAGAGTGGCATAATGATTGAAGATTTGGGCTTTGAAGGTATGTTCTCTTCAAGGTTTCAGGTTCGAGACTCACATGTGACATTACTCCTTGGTTGTCTTTCGGTACCTGGCCTAGGGACGGGCGGGATTACCCTTATTTCAAAAAAAACACACAACCAACCTCCATGGGCAGCTTGGTGGTCAAAATGACAATATAAAAACCAAAAGATTGTGGGAATAATCCAGGTGCGTGCAACCTGGAGACATGAATTACGTTGTTTTTCTGATTATATGTTGTTGTGGTGTTGGTGTTGGGGTCAGGTGTCAATGAAAACAGAAGTAACATGGCTACGAGACATGCTGAAAGGAGACGACACATTCGAATTACAAGTAAAATTGCTGAAGCAAATCCCTGAAGAGTACCCATACAAAGACGACGAGTAACATAATAATCTCATTCTCAAACAAACCCTCTTTTATTTCTACTTATCTGCCACTGTTTTTCGTTTGTGTTCATTTGATCTCATATATATAGCTACATTTTGGATTTCTCCAACTAATATCCATTCTATATTATTAAAAGGCAATGAGTCTTAAAACTTTTTTAGACTAAAATATCATTTTAAATTTTAGTTCGCCTTAAAATATCTTCTTTTTTTCTTTTTTCTTTTTTTTTTATCTCTGTGA

mRNA sequence

CGAGCCATAGGCACGAAGGCCATTTGGATCTTGTAGCCCCATAGACCACAAGTCTAACACTGTTCTTCACTTTCTTTAGGCCATTTGGATCCATCATGCCTCCTGCTGGTCCTCGATCCGGCGACGCAATCTTCGCTAGCGTTGAGCGAGTGAATGCGGAGTTGTTTACCTTGACTTATGGAGCGACTGTTCGTCAATTGCTCACGGATCTGGAGGAGGTTGAGGAGGTCAACAAACAGCTCGATCAGATGGGCTATAATATTGGAATCAGGCTGATTGATGAGTTTCTAGCAAAATCTAATATTTCGAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTCGGGTTGAAAATGTTTTTGGGAGTGAATGCAACGGTGGCCAACTGGGATGCTGAAGGCACATGCTGCAGTATTGTTCTAGAAGACAATCCATTGGTAGACTTCGTTGAGCTGCCTGATACTTGTCAAGGTCTACATTACTGCAATATCTTAAGTGGAGTCATCAGAGGAGCACTTGAGATGGTGTCAATGAAAACAGAAGTAACATGGCTACGAGACATGCTGAAAGGAGACGACACATTCGAATTACAAGTAAAATTGCTGAAGCAAATCCCTGAAGAGTACCCATACAAAGACGACGAGTAACATAATAATCTCATTCTCAAACAAACCCTCTTTTATTTCTACTTATCTGCCACTGTTTTTCGTTTGTGTTCATTTGATCTCATATATATAGCTACATTTTGGATTTCTCCAACTAATATCCATTCTATATTATTAAAAGGCAATGAGTCTTAAAACTTTTTTAGACTAAAATATCATTTTAAATTTTAGTTCGCCTTAAAATATCTTCTTTTTTTCTTTTTTCTTTTTTTTTTATCTCTGTGA

Coding sequence (CDS)

ATGCCTCCTGCTGGTCCTCGATCCGGCGACGCAATCTTCGCTAGCGTTGAGCGAGTGAATGCGGAGTTGTTTACCTTGACTTATGGAGCGACTGTTCGTCAATTGCTCACGGATCTGGAGGAGGTTGAGGAGGTCAACAAACAGCTCGATCAGATGGGCTATAATATTGGAATCAGGCTGATTGATGAGTTTCTAGCAAAATCTAATATTTCGAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTCGGGTTGAAAATGTTTTTGGGAGTGAATGCAACGGTGGCCAACTGGGATGCTGAAGGCACATGCTGCAGTATTGTTCTAGAAGACAATCCATTGGTAGACTTCGTTGAGCTGCCTGATACTTGTCAAGGTCTACATTACTGCAATATCTTAAGTGGAGTCATCAGAGGAGCACTTGAGATGGTGTCAATGAAAACAGAAGTAACATGGCTACGAGACATGCTGAAAGGAGACGACACATTCGAATTACAAGTAAAATTGCTGAAGCAAATCCCTGAAGAGTACCCATACAAAGACGACGAGTAA

Protein sequence

MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEYPYKDDE

Homology

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BLAST of Sed0000628 vs. NCBI nr
Match: XP_022139368.1 (trafficking protein particle complex subunit 3 [Momordica charantia])

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 182/186 (97.85%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETA+VIAKVGLKMFLGVNATV NWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETAEVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDDTFELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. NCBI nr
Match: XP_038896395.1 (trafficking protein particle complex subunit 3 [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 182/186 (97.85%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV NWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDD+FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. NCBI nr
Match: XP_022941300.1 (trafficking protein particle complex subunit 3-like [Cucurbita moschata])

HSP 1 Score: 372.1 bits (954), Expect = 2.8e-99
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV NWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDD FELQVKLLKQIPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. NCBI nr
Match: XP_022981618.1 (trafficking protein particle complex subunit 3-like [Cucurbita maxima])

HSP 1 Score: 371.7 bits (953), Expect = 3.7e-99
Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV NWDAEGTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDD FELQVKLLKQIPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. NCBI nr
Match: KAG6592023.1 (Trafficking protein particle complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369.4 bits (947), Expect = 1.8e-98
Identity = 181/186 (97.31%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 77  MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 136

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAK+GLKMFLGVNATV NWDAEGTCCSIVLEDNPLVDF
Sbjct: 137 IDEFLAKSNISRCVDFKETADVIAKIGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 196

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDD+FELQVKLLKQIPEEY
Sbjct: 197 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQIPEEY 256

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 257 PYKDDE 262

[Close]

BLAST of Sed0000628 vs. ExPASy Swiss-Prot
Match: Q5ZI57 (Trafficking protein particle complex subunit 3 OS=Gallus gallus OX=9031 GN=TRAPPC3 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.7e-51
Identity = 93/165 (56.36%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++N+ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMNSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAK+  KM+LG+  ++ NW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKIAFKMYLGITPSITNWSPGGDEFSLILENNPLVDFVELPDNHSSLIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEYP 182
            GV+RGALEMV M  +V +++D LKGD   E+++K +++I +  P
Sbjct: 132 CGVLRGALEMVQMAVDVKFVQDTLKGDSVTEIRMKFIRRIEDNLP 176

[Close]

BLAST of Sed0000628 vs. ExPASy Swiss-Prot
Match: Q86K94 (Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=trappc3 PE=3 SV=2)

HSP 1 Score: 201.4 bits (511), Expect = 8.7e-51
Identity = 102/174 (58.62%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 9   GDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKS 68
           G+ +F  VE++N+ELFTLTYGA V QL+ D E++E+VN +L+QMGYNIGIRLI+EFLAKS
Sbjct: 9   GNDVFNKVEKINSELFTLTYGALVTQLIKDYEDIEQVNIKLEQMGYNIGIRLIEEFLAKS 68

Query: 69  NISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDFVELPDTCQ 128
            I RC DF ETA+VIAKVG KMFLGVNA V +WDA      + +EDNPL+DFVELPD  +
Sbjct: 69  GIGRCSDFIETAEVIAKVGFKMFLGVNAHVGDWDANRKEFHLTIEDNPLIDFVELPDQYK 128

Query: 129 -GLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEYP 182
             L+Y NIL GV+RGALEMV MK + T+++  L  D T E++V L + + +  P
Sbjct: 129 HKLYYSNILCGVMRGALEMVQMKVKCTFVKCTLSDDSTSEIKVVLEEVLSDMIP 182

[Close]

BLAST of Sed0000628 vs. ExPASy Swiss-Prot
Match: O55013 (Trafficking protein particle complex subunit 3 OS=Mus musculus OX=10090 GN=Trappc3 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-50
Identity = 92/165 (55.76%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  ++ NW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEYP 182
            GV+RGALEMV M  E  +++D LKGD   E++++ +++I +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Sed0000628 vs. ExPASy Swiss-Prot
Match: Q5U1Z2 (Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-50
Identity = 92/165 (55.76%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  ++ NW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEYP 182
            GV+RGALEMV M  E  +++D LKGD   E++++ +++I +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Sed0000628 vs. ExPASy Swiss-Prot
Match: O43617 (Trafficking protein particle complex subunit 3 OS=Homo sapiens OX=9606 GN=TRAPPC3 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-49
Identity = 91/165 (55.15%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MG+NIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  ++ NW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEYP 182
            GV+RGALEMV M  E  +++D LKGD   E++++ +++I +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Sed0000628 vs. ExPASy TrEMBL
Match: A0A6J1CFG3 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111010320 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.0e-99
Identity = 182/186 (97.85%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETA+VIAKVGLKMFLGVNATV NWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETAEVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDDTFELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. ExPASy TrEMBL
Match: A0A6J1FT71 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111446643 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV NWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDD FELQVKLLKQIPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. ExPASy TrEMBL
Match: A0A6J1J2K9 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111480683 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.8e-99
Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV NWDAEGTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDD FELQVKLLKQIPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. ExPASy TrEMBL
Match: A0A5A7TX50 (Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00240 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 8.9e-99
Identity = 181/186 (97.31%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV NWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDD+FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. ExPASy TrEMBL
Match: A0A0A0LAM3 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_3G419290 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 8.9e-99
Identity = 181/186 (97.31%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV NWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDML+GDD+FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. TAIR 10
Match: AT5G54750.1 (Transport protein particle (TRAPP) component )

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-92
Identity = 159/186 (85.48%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           M P GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVGPRSGDAIFSSIDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKS +SRCVDFKETA++IAKVG KMFLGV A+V +WD++GTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSGVSRCVDFKETAEMIAKVGFKMFLGVTASVTSWDSDGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFELQVKLLKQIPEEY 180
           VELPDTCQGL+YCN+LSGVIRGALEMVSMKTEVTW RD+L+GDD +ELQVKLLKQ+ EEY
Sbjct: 121 VELPDTCQGLYYCNVLSGVIRGALEMVSMKTEVTWTRDVLRGDDAYELQVKLLKQVAEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Sed0000628 vs. TAIR 10
Match: AT5G54750.2 (Transport protein particle (TRAPP) component )

HSP 1 Score: 327.4 bits (838), Expect = 7.4e-90
Identity = 159/199 (79.90%), Postives = 176/199 (88.44%), Query Frame = 0


Query: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQM-------- 60
           M P GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQM        
Sbjct: 1   MAPVGPRSGDAIFSSIDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMYSSSTIYV 60

Query: 61  -----GYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTC 120
                GYNIGIRLIDEFLAKS +SRCVDFKETA++IAKVG KMFLGV A+V +WD++GTC
Sbjct: 61  DSLPWGYNIGIRLIDEFLAKSGVSRCVDFKETAEMIAKVGFKMFLGVTASVTSWDSDGTC 120

Query: 121 CSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLKGDDTFE 180
           CSI+LEDNPLVDFVELPDTCQGL+YCN+LSGVIRGALEMVSMKTEVTW RD+L+GDD +E
Sbjct: 121 CSIILEDNPLVDFVELPDTCQGLYYCNVLSGVIRGALEMVSMKTEVTWTRDVLRGDDAYE 180

Query: 181 LQVKLLKQIPEEYPYKDDE 187
           LQVKLLKQ+ EEYPYKDDE
Sbjct: 181 LQVKLLKQVAEEYPYKDDE 199

The following BLAST results are available for this feature:

BLAST of Sed0000628 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139368.1	2.2e-99	97.85	trafficking protein particle complex subunit 3 [Momordica charantia]	[more]
XP_038896395.1	2.2e-99	97.85	trafficking protein particle complex subunit 3 [Benincasa hispida]	[more]
XP_022941300.1	2.8e-99	98.39	trafficking protein particle complex subunit 3-like [Cucurbita moschata]	[more]
XP_022981618.1	3.7e-99	97.85	trafficking protein particle complex subunit 3-like [Cucurbita maxima]	[more]
KAG6592023.1	1.8e-98	97.31	Trafficking protein particle complex subunit 3, partial [Cucurbita argyrosperma ...	[more]

BLAST of Sed0000628 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZI57	8.7e-51	56.36	Trafficking protein particle complex subunit 3 OS=Gallus gallus OX=9031 GN=TRAPP...	[more]
Q86K94	8.7e-51	58.62	Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum OX=44...	[more]
O55013	7.3e-50	55.76	Trafficking protein particle complex subunit 3 OS=Mus musculus OX=10090 GN=Trapp...	[more]
Q5U1Z2	7.3e-50	55.76	Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=...	[more]
O43617	2.1e-49	55.15	Trafficking protein particle complex subunit 3 OS=Homo sapiens OX=9606 GN=TRAPPC...	[more]

BLAST of Sed0000628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFG3	1.0e-99	97.85	Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1FT71	1.4e-99	98.39	Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J2K9	1.8e-99	97.85	Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5A7TX50	8.9e-99	97.31	Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0LAM3	8.9e-99	97.31	Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_3...	[more]

BLAST of Sed0000628 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54750.1	1.2e-92	85.48	Transport protein particle (TRAPP) component	[more]
AT5G54750.2	7.4e-90	79.90	Transport protein particle (TRAPP) component	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	GENE3D	3.30.1380.20	Trafficking protein particle complex subunit 3	coord: 4..158 e-value: 1.5E-71 score: 241.5
None	No IPR available	PANTHER	PTHR13048:SF5	PROTEIN PARTICLE COMPLEX SUBUNIT, PUTATIVE-RELATED	coord: 1..148
IPR007194	Transport protein particle (TRAPP) component	PFAM	PF04051	TRAPP	coord: 24..150 e-value: 2.3E-31 score: 108.5
IPR016721	Bet3 family	PANTHER	PTHR13048	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3	coord: 1..148
IPR016721	Bet3 family	CDD	cd14942	TRAPPC3_bet3	coord: 20..147 e-value: 2.12565E-89 score: 257.054
IPR024096	NO signalling/Golgi transport ligand-binding domain superfamily	SUPERFAMILY	111126	Ligand-binding domain in the NO signalling and Golgi transport	coord: 18..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000628.1	Sed0000628.1	mRNA
Sed0000628.2	Sed0000628.2	mRNA
Sed0000628.3	Sed0000628.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0048193	Golgi vesicle transport
cellular_component	GO:0033106	cis-Golgi network membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0030008	TRAPP complex