Sed0000609 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAACACAAAACCTATGAACTCAAAATTGATATGTAGTTGATTCATGCAAACCTCAATCTTTCAACACCTATAAATAACACCCAAAATCCGAAAGAAACCATCAAACAAAACACATTTAAAAAATCCCAGAAACAAGAGAAGGCAATTATGGAAGGAATGAAGATTATAATGTTGTTGCTGTTGGCTGTGGTGATGGGTCAGGCTCAGGCTCAGCCACAAAGCTGCTCAACTCAGCTCATTAGCCTCAATAATTGTGCACCTTTTGTAGTGCCTGGTGCCACTAGCCCTAGCCAAGGGTGCTGTGGGGCTCTTGGAGCTATGCAACAAGACTGCCTTTGCAGCACTCTTAGAATTGCTTCAACTCTGCCTTCTCTTTGCCATCTTCCACCTCTTTCTTGTGGTTAGTTTTTTTTTTTTTTTTTTTGGTGTGTGAAATGGATTGGTTTGAATCAAGGGTTTATTTTTGGTTTATTTCAGGTACTAACTAGAGGAAAAGAATGATGGGGATTACAAGAAAAATGAATAAAGTTGGAGTTTTTATCATTTGGTTCTGTTTTGTTTTTGTTTTGGTGTGCTTTGATCTGAAGTCTATGTTCTCA CCAACACAAAACCTATGAACTCAAAATTGATATGTAGTTGATTCATGCAAACCTCAATCTTTCAACACCTATAAATAACACCCAAAATCCGAAAGAAACCATCAAACAAAACACATTTAAAAAATCCCAGAAACAAGAGAAGGCAATTATGGAAGGAATGAAGATTATAATGTTGTTGCTGTTGGCTGTGGTGATGGGTCAGGCTCAGGCTCAGCCACAAAGCTGCTCAACTCAGCTCATTAGCCTCAATAATTGTGCACCTTTTGTAGTGCCTGGTGCCACTAGCCCTAGCCAAGGGTGCTGTGGGGCTCTTGGAGCTATGCAACAAGACTGCCTTTGCAGCACTCTTAGAATTGCTTCAACTCTGCCTTCTCTTTGCCATCTTCCACCTCTTTCTTGTGGTACTAACTAGAGGAAAAGAATGATGGGGATTACAAGAAAAATGAATAAAGTTGGAGTTTTTATCATTTGGTTCTGTTTTGTTTTTGTTTTGGTGTGCTTTGATCTGAAGTCTATGTTCTCA ATGGAAGGAATGAAGATTATAATGTTGTTGCTGTTGGCTGTGGTGATGGGTCAGGCTCAGGCTCAGCCACAAAGCTGCTCAACTCAGCTCATTAGCCTCAATAATTGTGCACCTTTTGTAGTGCCTGGTGCCACTAGCCCTAGCCAAGGGTGCTGTGGGGCTCTTGGAGCTATGCAACAAGACTGCCTTTGCAGCACTCTTAGAATTGCTTCAACTCTGCCTTCTCTTTGCCATCTTCCACCTCTTTCTTGTGGTACTAACTAG MEGMKIIMLLLLAVVMGQAQAQPQSCSTQLISLNNCAPFVVPGATSPSQGCCGALGAMQQDCLCSTLRIASTLPSLCHLPPLSCGTN Homology
BLAST of Sed0000609 vs. NCBI nr
Match: XP_038892584.1 (protein MEN-8-like [Benincasa hispida]) HSP 1 Score: 136.3 bits (342), Expect = 1.2e-28 Identity = 63/83 (75.90%), Postives = 77/83 (92.77%), Query Frame = 0
BLAST of Sed0000609 vs. NCBI nr
Match: XP_004140787.1 (protein MEN-8 [Cucumis sativus] >KGN57351.1 hypothetical protein Csa_010992 [Cucumis sativus]) HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27 Identity = 62/83 (74.70%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Sed0000609 vs. NCBI nr
Match: XP_008439180.1 (PREDICTED: protein MEN-8 [Cucumis melo] >KAA0033620.1 protein MEN-8 [Cucumis melo var. makuwa] >TYK22288.1 protein MEN-8 [Cucumis melo var. makuwa]) HSP 1 Score: 131.3 bits (329), Expect = 3.9e-27 Identity = 62/83 (74.70%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Sed0000609 vs. NCBI nr
Match: XP_022968421.1 (stamen-specific protein FIL1 [Cucurbita maxima] >XP_023542033.1 stamen-specific protein FIL1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 129.4 bits (324), Expect = 1.5e-26 Identity = 61/83 (73.49%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Sed0000609 vs. NCBI nr
Match: XP_022945428.1 (stamen-specific protein FIL1 [Cucurbita moschata]) HSP 1 Score: 129.0 bits (323), Expect = 1.9e-26 Identity = 61/83 (73.49%), Postives = 74/83 (89.16%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy Swiss-Prot
Match: Q38737 (Stamen-specific protein FIL1 OS=Antirrhinum majus OX=4151 GN=FIL1 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.1e-16 Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy Swiss-Prot
Match: Q43495 (Protein 108 OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 7.2e-16 Identity = 41/85 (48.24%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy Swiss-Prot
Match: O24356 (Protein MEN-8 OS=Silene latifolia OX=37657 GN=MEN-8 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.1e-15 Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy Swiss-Prot
Match: Q40227 (Protein LIM3 OS=Lilium longiflorum OX=4690 GN=LIM3 PE=3 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 7.0e-11 Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy Swiss-Prot
Match: Q00762 (Tapetum-specific protein A9 OS=Arabidopsis thaliana OX=3702 GN=A9 PE=2 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 2.7e-10 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy TrEMBL
Match: A0A0A0LBB5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180390 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 8.5e-28 Identity = 62/83 (74.70%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy TrEMBL
Match: A0A5D3DFQ3 (Protein MEN-8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00440 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.9e-27 Identity = 62/83 (74.70%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy TrEMBL
Match: A0A1S3AY46 (protein MEN-8 OS=Cucumis melo OX=3656 GN=LOC103484052 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.9e-27 Identity = 62/83 (74.70%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy TrEMBL
Match: A0A6J1HUT5 (stamen-specific protein FIL1 OS=Cucurbita maxima OX=3661 GN=LOC111467668 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 7.2e-27 Identity = 61/83 (73.49%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Sed0000609 vs. ExPASy TrEMBL
Match: A0A6J1G0V2 (stamen-specific protein FIL1 OS=Cucurbita moschata OX=3662 GN=LOC111449664 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 9.4e-27 Identity = 61/83 (73.49%), Postives = 74/83 (89.16%), Query Frame = 0
BLAST of Sed0000609 vs. TAIR 10
Match: AT5G52160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 84.0 bits (206), Expect = 6.7e-17 Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of Sed0000609 vs. TAIR 10
Match: AT5G62080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 77.0 bits (188), Expect = 8.2e-15 Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of Sed0000609 vs. TAIR 10
Match: AT5G07230.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 1.9e-11 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of Sed0000609 vs. TAIR 10
Match: AT1G73890.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 41.2 bits (95), Expect = 5.0e-04 Identity = 30/92 (32.61%), Postives = 45/92 (48.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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