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Sed0000071 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGTTTCTGGCGCCGCAAGCAACAATGGGAGCTTCGACAATGTCCTCTCACACTCACCTCATCCACTCTCTTCTTCTCCGCTCAGTTTCTTCTTCTCTCTTCTCTAAACCCTCCGCCGTCGCCGCCGCCGCCGCCGCCATCTCCGCCGCTCGCTTCCGTCAATCTAAACCCAACCCTTCAATCTTCCTCACTCGCCAACATCCTCACCGTTCCCGATCCCTCACTCCCTCGGCATCAACTTCCTTCTCTCGCTCCTTTTCCGACCTCGCCGAGGTCGGATTCGATGAACAACACGAGGAAATCGAAGTTGAAATCGATGATCTCGAACCGGAAGAGGCTGTTGGGGATGGATTGCAAACTGGCGCGGCTTCGGAGTTGTCTTCGTCGGCGGTGGATGGAAGTGAAGTGAAGGATATTCCGAGGTTGACGGTGAAGGAGAAGAAGGAATTGGCGTCATTCGCTCATAGCTTGGGGAAGAATCTGAAGAGTCAGTTGGTGGGGAAATCTGGTGTTACTTCTGGATTGGCTACTTCCTTCATCGAGACACTTGAAGCTAACGAGCTTCTCAAGGTTTGTTACTTCTTTTCTCTGTTTGATGCTATTCATGGAGTTCATATAGTTTTAGAATTAGGGTTTATGAAGCAACTATTCGAAGGAAACACAAATTTTTACCCTATGCTTCTTGTGCAATTTGAATAACTAGGACAATCTGGACATATACTGCTTTTTTGTAGTTAGGATTGCAATTACATTTTTTCTTTGGGAAAATAAATTCGTTTGTTGAATAGTAATTTTCGATTATTGTTGTCTCCAAGGGGTGGCACATTGGTCGAAGGGAATGTTCCCCTCAAAGTCCCAGGTTCGAGACTCAGCTGTGACATTATTCATTCGATGTCTCCCGGTGCCTGGCCTAGGGACGGACGTGGTTACCCTTGTTTCAAAGAAAAAAATTTCGATTATTGTTATAGGAAAGTTTTTGGTTGATCGACTCAAAGGGAATGGAAAATGTTTGTGCTTTAAAACTGTGGTGGGAATGAAAAACTATGGATTGGTCTAGTGTTCAATAAATGTCAAATGAAAGAGAAGGATGGAGAGTAAGCAGATTCAAGCCATGGTGGTCATCCCAAAGGGCAAATAATAGACATGTATCCACAAGGTTGTAGGTTCAAATCCTCCGATCTCCAAATATTATTGTTGTACTTAAAAAAAAGAAAGATCACGGTGATCATCTACAACGGATTTAATATCCTACTAGTTATTTTGATAACCAAATATAGTTGAGTCAAATAGTTGTCTTGTCATAGTAATCTAAGTTGACTCGGGTTATATAATAAAACTCGTTCCTAATCCATCATAGAGGGCTTTGGGCAAAGAGGTTATGTGTTCGATTCATGATGGCTACCTACTAGAAATTAATTTCACATGGGTTTGCTTGACACCTGAATGTTGTAGGATCAGACGGTGTGTCTTGTGAGAATAGTCGACGTGTGCGTAACCTGACTCTCATGGATATAAGAAAAACATATGATTAGTTGATCATAGATTGAATTTGTTGATAGATAGGGGAGGGCTCTTTCCATTAGTTTGGGGGGTTAATATTTAGGTATCTTAAAGATTGGAATGGGATAGAATCTCAGAATTCATATGGTTAAGCATTTTCCCTTTATATAATTGCCTTCCCTTAGTTTTAAATCCACAAAAGTAACAATCATCTTCATGTACATGTATTCCTCATCTTGTCCTACTACATTCATTTTCTGCATGAGAAGTTGGCCTACTTTATGAAGCAAACATAAACATACATTTTTTTAAAACAAAAAACTATCTTGATTCAAGCCTATTTATTTTAGTTTTTCTCATTTTGAGTAGATTTTTCTTCATGACCCTCATTTTTAAAAGAAAAACAATGATATTTCTGGTTGGTTTGATTTGTTCATGAAGAGGAATGTAAAATCCAAGGAATCAATTGTGGTTTCTGTCTGTAAACTTGACTAATGGCTTCAATTTCTGTTTTCTTTTGGGCGCACGGGTCATTGTTTTTATTTTATTTTGAAGGGTGCTTATAAAAAGGGACATTTCCTACAAGTTAGATGGTATGTTTCGGGAGAATACTTGAGATGCATGTAAGTTGGCCCGTACACTCACACATATAAAAAAAGTGACATTTCTGGTTGATTTGTTTTGTTTATAAAAGGAATGTATATCCTCTGAAATTCATTTGTAGTTTCTGTCTACAAACTTGACTAATGGATTCAATTTCTATGTTCTTTCTCATTTAAATCTTGAATATTAGAAAATCCTTAGGTCAAACTAGAATATAAGAAATTGAACCACTGGATACAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTAGTGAAGCAATTGGAGAAATCAACTGGCTCTGTGGTGGTGAGCAAAATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAGGAAAAACGACGAGCTCGAAAAATTTATGTGAGAAAAGAACCCGATCGAGTGCAATCCATTTTGCAGGTAAGTAAATGGGTTGTTGACATTCTTAGCTCCTTTATTTTAAAAAAAGAGTTCATATCGTGTTTGATAATTATTTAGGTTTTGTTTGATGATCATTTAAGTACCGTTTGATAACTTTTTGGATTTTAGTTTTTGAAATTTAAGTTTTTTTTTACTAAAAGTCTCTGCAAGGAATTTCGTCTTCCCTAACTAAATTCTGAAAAAAAAATTGTTGGAGATCCTCATTTGTCCCATATTAAAAAGGTGAAGAGTTTCTAACATCTTTTTATAATAAGTGGGCTACTCTCCTCATCATCATTTTATTTTTAGAATTGTCCAAAAAATCAAATATTTTCTTAAGAAATATAAAGTTCATGGACAAATGATGAAAAATGAATACAATTTTCCATTATAAAAAATCTAATGGTCATGAAACGATGACTTAATTTTAGTTATTTTTGTTTGGAAATATAGACTTTTATATCGGGTTTACTTATTTTGTTATGTACCTTTTTACCCATGTTTTTAAAAGTCAAGTCTAAGTTTTAAAAAAATTATTTTTTGGTTAAAAATTCAAATGCAATATGAAATTTATAGCAAATATATGATAAGTAAACAAATACAATGTTCAAATATTAAATGGTTATCATTGGCAACTTCAGTATTTTACTGCAAGTTCTCGCTTAGATTTGAATAAATGTATTGATGCAGAATAAAGTACAAACACCCACGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCCGTTTGGATCTGGAGTAGGATTCACATCTAGCACGTTCATTGTGGAGGGAAAGATTTTGAATTCCAACCCCATGTAAGTTGTGACCTCCTTGGGCAAGTTTGCCCCTTGAGGCACTTTCTTTCTCTTCACATGCCTTTATTGGGGTAATTTGTTTACTTCTATGCAGTATTTGGTTAGTAATTCTTTGCTTGGCTTGGGGAGCCCTTTGAGAAGCCTTTCTTTCTTTCTTTGGGAAACCATTAATACAAAAGACAATAACTTACACAATTGTCTTGGCCTAGCAGCAAAGGGGAACTTGTGGGTTCCATCCATGATTATCACCCACCTAAAAATTTATTAGAGTAAAATGTCATTTTGGTCCATGAATTTTAGTCGTTGTACTTTAAAAAAATACTTAAAATTGGTCCTTGC CAGTTTCTGGCGCCGCAAGCAACAATGGGAGCTTCGACAATGTCCTCTCACACTCACCTCATCCACTCTCTTCTTCTCCGCTCAGTTTCTTCTTCTCTCTTCTCTAAACCCTCCGCCGTCGCCGCCGCCGCCGCCGCCATCTCCGCCGCTCGCTTCCGTCAATCTAAACCCAACCCTTCAATCTTCCTCACTCGCCAACATCCTCACCGTTCCCGATCCCTCACTCCCTCGGCATCAACTTCCTTCTCTCGCTCCTTTTCCGACCTCGCCGAGGTCGGATTCGATGAACAACACGAGGAAATCGAAGTTGAAATCGATGATCTCGAACCGGAAGAGGCTGTTGGGGATGGATTGCAAACTGGCGCGGCTTCGGAGTTGTCTTCGTCGGCGGTGGATGGAAGTGAAGTGAAGGATATTCCGAGGTTGACGGTGAAGGAGAAGAAGGAATTGGCGTCATTCGCTCATAGCTTGGGGAAGAATCTGAAGAGTCAGTTGGTGGGGAAATCTGGTGTTACTTCTGGATTGGCTACTTCCTTCATCGAGACACTTGAAGCTAACGAGCTTCTCAAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTAGTGAAGCAATTGGAGAAATCAACTGGCTCTGTGGTGGTGAGCAAAATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAGGAAAAACGACGAGCTCGAAAAATTTATGTGAGAAAAGAACCCGATCGAGTGCAATCCATTTTGCAGAATAAAGTACAAACACCCACGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCCGTTTGGATCTGGAGTAGGATTCACATCTAGCACGTTCATTGTGGAGGGAAAGATTTTGAATTCCAACCCCATGTAAGTTGTGACCTCCTTGGGCAAGTTTGCCCCTTGAGGCACTTTCTTTCTCTTCACATGCCTTTATTGGGGTAATTTGTTTACTTCTATGCAGTATTTGGTTAGTAATTCTTTGCTTGGCTTGGGGAGCCCTTTGAGAAGCCTTTCTTTCTTTCTTTGGGAAACCATTAATACAAAAGACAATAACTTACACAATTGTCTTGGCCTAGCAGCAAAGGGGAACTTGTGGGTTCCATCCATGATTATCACCCACCTAAAAATTTATTAGAGTAAAATGTCATTTTGGTCCATGAATTTTAGTCGTTGTACTTTAAAAAAATACTTAAAATTGGTCCTTGC ATGGGAGCTTCGACAATGTCCTCTCACACTCACCTCATCCACTCTCTTCTTCTCCGCTCAGTTTCTTCTTCTCTCTTCTCTAAACCCTCCGCCGTCGCCGCCGCCGCCGCCGCCATCTCCGCCGCTCGCTTCCGTCAATCTAAACCCAACCCTTCAATCTTCCTCACTCGCCAACATCCTCACCGTTCCCGATCCCTCACTCCCTCGGCATCAACTTCCTTCTCTCGCTCCTTTTCCGACCTCGCCGAGGTCGGATTCGATGAACAACACGAGGAAATCGAAGTTGAAATCGATGATCTCGAACCGGAAGAGGCTGTTGGGGATGGATTGCAAACTGGCGCGGCTTCGGAGTTGTCTTCGTCGGCGGTGGATGGAAGTGAAGTGAAGGATATTCCGAGGTTGACGGTGAAGGAGAAGAAGGAATTGGCGTCATTCGCTCATAGCTTGGGGAAGAATCTGAAGAGTCAGTTGGTGGGGAAATCTGGTGTTACTTCTGGATTGGCTACTTCCTTCATCGAGACACTTGAAGCTAACGAGCTTCTCAAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTAGTGAAGCAATTGGAGAAATCAACTGGCTCTGTGGTGGTGAGCAAAATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAGGAAAAACGACGAGCTCGAAAAATTTATGTGAGAAAAGAACCCGATCGAGTGCAATCCATTTTGCAGAATAAAGTACAAACACCCACGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCCGTTTGGATCTGGAGTAG MGASTMSSHTHLIHSLLLRSVSSSLFSKPSAVAAAAAAISAARFRQSKPNPSIFLTRQHPHRSRSLTPSASTSFSRSFSDLAEVGFDEQHEEIEVEIDDLEPEEAVGDGLQTGAASELSSSAVDGSEVKDIPRLTVKEKKELASFAHSLGKNLKSQLVGKSGVTSGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEKSTGSVVVSKIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVQSILQNKVQTPTSSNRGRRGSSRLDLE Homology
BLAST of Sed0000071 vs. NCBI nr
Match: XP_022971306.1 (uncharacterized protein LOC111470060 [Cucurbita maxima]) HSP 1 Score: 345.1 bits (884), Expect = 5.5e-91 Identity = 214/289 (74.05%), Postives = 228/289 (78.89%), Query Frame = 0
BLAST of Sed0000071 vs. NCBI nr
Match: XP_023529380.1 (uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 343.6 bits (880), Expect = 1.6e-90 Identity = 215/295 (72.88%), Postives = 230/295 (77.97%), Query Frame = 0
BLAST of Sed0000071 vs. NCBI nr
Match: KAG6588422.1 (hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 343.2 bits (879), Expect = 2.1e-90 Identity = 213/289 (73.70%), Postives = 229/289 (79.24%), Query Frame = 0
BLAST of Sed0000071 vs. NCBI nr
Match: XP_004148536.1 (uncharacterized protein LOC101213060 [Cucumis sativus] >KGN43169.1 hypothetical protein Csa_020174 [Cucumis sativus]) HSP 1 Score: 322.4 bits (825), Expect = 3.8e-84 Identity = 194/282 (68.79%), Postives = 223/282 (79.08%), Query Frame = 0
BLAST of Sed0000071 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]) HSP 1 Score: 320.9 bits (821), Expect = 1.1e-83 Identity = 193/283 (68.20%), Postives = 223/283 (78.80%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.3e-09 Identity = 36/89 (40.45%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05 Identity = 28/89 (31.46%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05 Identity = 28/89 (31.46%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05 Identity = 28/89 (31.46%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy Swiss-Prot
Match: P71376 (RNA-binding protein HI_1333 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1333 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 6.9e-04 Identity = 26/89 (29.21%), Postives = 47/89 (52.81%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.6e-91 Identity = 214/289 (74.05%), Postives = 228/289 (78.89%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.8e-84 Identity = 194/282 (68.79%), Postives = 223/282 (79.08%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 5.3e-84 Identity = 193/283 (68.20%), Postives = 223/283 (78.80%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 4.0e-63 Identity = 131/161 (81.37%), Postives = 150/161 (93.17%), Query Frame = 0
BLAST of Sed0000071 vs. ExPASy TrEMBL
Match: A0A6J1C409 (uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007723 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 1.5e-62 Identity = 140/182 (76.92%), Postives = 160/182 (87.91%), Query Frame = 0
BLAST of Sed0000071 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 142.1 bits (357), Expect = 6.5e-34 Identity = 115/292 (39.38%), Postives = 156/292 (53.42%), Query Frame = 0
BLAST of Sed0000071 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 140.2 bits (352), Expect = 2.5e-33 Identity = 107/260 (41.15%), Postives = 145/260 (55.77%), Query Frame = 0
BLAST of Sed0000071 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 132.9 bits (333), Expect = 4.0e-31 Identity = 98/237 (41.35%), Postives = 140/237 (59.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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