Sed0000064 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATAGCCCATTTCATTAAACTTATCATTCTTCATTCTCCAATTGTTCTCTTACCTTTCTCCACTAAAAAAACCCATCTTTTGAACTTTAATTTGTGAATTGGTTTTTGAGTGCTCCATGCTTCCATTTCAAACCCTTCTTCTTATCTCTCTCCCTCCTCCATGACATTGAAATTTTCCCAATTCTTTTTTACCATGCTTTGGATCTCTCTTCTTCTCTTATTACTTCATGAACTAAACATCTTCAAGGCCAAAATGAATCACAAACCAACACCAACCATAACATTTTCTTATCCCCTCTCCTCCAACCATGTAACAAGGAAAGTACTGGCTAGCAAGGTTGAATTCACCCCATTTTTTCGGCATCGGCGGCCGAATGGACCGAGAAAGCATTTGCTGCCTACCGACGTCGAACCACCTGAAATCGATCCTCGCTATGGCGTCGAGAAGCGACTTGTCCCCACTGGTCCAAACCCATTGCACCATTGATGAATTCTCCGGTGAAGGGAAAAAGAAAAGAAAAGGTCCATAATAGTTAAAGTTTGAAATCCAATTATTTCTTCCATGAATGATAATACTCAATTTCTTTCTTTTTCCTAAGGAGAAAAAAAAAATCAAAAATTTAGTGTGAATCAATCCTATTGTTTGATGATATTGATGGTGTGAAACAAAAAATTAAAAATTATTGATAAGTAGAAATTAAATTCTTGCTTATTTTACGATGTGGTTTATTTTTGGTGGTTGTATCAAATAAACCAAGGGTAAATTAAGTTAGTAGAAGCTCCTACTTATCGATAAGTAAGAATGTTTTATTGTTAATTGAGTACACTGTGAATTTGAGTTTGTACATTAATTCGG CAATAGCCCATTTCATTAAACTTATCATTCTTCATTCTCCAATTGTTCTCTTACCTTTCTCCACTAAAAAAACCCATCTTTTGAACTTTAATTTGTGAATTGGTTTTTGAGTGCTCCATGCTTCCATTTCAAACCCTTCTTCTTATCTCTCTCCCTCCTCCATGACATTGAAATTTTCCCAATTCTTTTTTACCATGCTTTGGATCTCTCTTCTTCTCTTATTACTTCATGAACTAAACATCTTCAAGGCCAAAATGAATCACAAACCAACACCAACCATAACATTTTCTTATCCCCTCTCCTCCAACCATGTAACAAGGAAAGTACTGGCTAGCAAGGTTGAATTCACCCCATTTTTTCGGCATCGGCGGCCGAATGGACCGAGAAAGCATTTGCTGCCTACCGACGTCGAACCACCTGAAATCGATCCTCGCTATGGCGTCGAGAAGCGACTTGTCCCCACTGGTCCAAACCCATTGCACCATTGATGAATTCTCCGGTGAAGGGAAAAAGAAAAGAAAAGGTCCATAATAGTTAAAGTTTGAAATCCAATTATTTCTTCCATGAATGATAATACTCAATTTCTTTCTTTTTCCTAAGGAGAAAAAAAAAATCAAAAATTTAGTGTGAATCAATCCTATTGTTTGATGATATTGATGGTGTGAAACAAAAAATTAAAAATTATTGATAAGTAGAAATTAAATTCTTGCTTATTTTACGATGTGGTTTATTTTTGGTGGTTGTATCAAATAAACCAAGGGTAAATTAAGTTAGTAGAAGCTCCTACTTATCGATAAGTAAGAATGTTTTATTGTTAATTGAGTACACTGTGAATTTGAGTTTGTACATTAATTCGG ATGACATTGAAATTTTCCCAATTCTTTTTTACCATGCTTTGGATCTCTCTTCTTCTCTTATTACTTCATGAACTAAACATCTTCAAGGCCAAAATGAATCACAAACCAACACCAACCATAACATTTTCTTATCCCCTCTCCTCCAACCATGTAACAAGGAAAGTACTGGCTAGCAAGGTTGAATTCACCCCATTTTTTCGGCATCGGCGGCCGAATGGACCGAGAAAGCATTTGCTGCCTACCGACGTCGAACCACCTGAAATCGATCCTCGCTATGGCGTCGAGAAGCGACTTGTCCCCACTGGTCCAAACCCATTGCACCATTGA MTLKFSQFFFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYPLSSNHVTRKVLASKVEFTPFFRHRRPNGPRKHLLPTDVEPPEIDPRYGVEKRLVPTGPNPLHH Homology
BLAST of Sed0000064 vs. NCBI nr
Match: KAG6601759.1 (CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26 Identity = 70/105 (66.67%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of Sed0000064 vs. NCBI nr
Match: XP_022775823.1 (CLAVATA3/ESR (CLE)-related protein 12-like [Durio zibethinus]) HSP 1 Score: 107.1 bits (266), Expect = 9.8e-20 Identity = 61/111 (54.95%), Postives = 74/111 (66.67%), Query Frame = 0
BLAST of Sed0000064 vs. NCBI nr
Match: XP_006437746.1 (CLAVATA3/ESR (CLE)-related protein 12 [Citrus clementina] >XP_024957241.1 CLAVATA3/ESR (CLE)-related protein 12 [Citrus sinensis] >ESR50986.1 hypothetical protein CICLE_v10033717mg [Citrus clementina]) HSP 1 Score: 104.4 bits (259), Expect = 6.4e-19 Identity = 63/124 (50.81%), Postives = 73/124 (58.87%), Query Frame = 0
BLAST of Sed0000064 vs. NCBI nr
Match: EOY02153.1 (Clavata3/esr-related 12, putative [Theobroma cacao]) HSP 1 Score: 102.4 bits (254), Expect = 2.4e-18 Identity = 55/104 (52.88%), Postives = 69/104 (66.35%), Query Frame = 0
BLAST of Sed0000064 vs. NCBI nr
Match: PSR84919.1 (CLE13p like [Actinidia chinensis var. chinensis]) HSP 1 Score: 102.4 bits (254), Expect = 2.4e-18 Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy Swiss-Prot
Match: Q29PU4 (CLAVATA3/ESR (CLE)-related protein 12 OS=Arabidopsis thaliana OX=3702 GN=CLE12 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16 Identity = 52/111 (46.85%), Postives = 65/111 (58.56%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy Swiss-Prot
Match: Q6NMF0 (CLAVATA3/ESR (CLE)-related protein 13 OS=Arabidopsis thaliana OX=3702 GN=CLE13 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10 Identity = 49/110 (44.55%), Postives = 60/110 (54.55%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy Swiss-Prot
Match: Q6Z6T2 (Inactive protein FON2 SPARE1 OS=Oryza sativa subsp. japonica OX=39947 GN=FOS1 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06 Identity = 40/121 (33.06%), Postives = 57/121 (47.11%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy Swiss-Prot
Match: A2X462 (Protein FON2 SPARE1 OS=Oryza sativa subsp. indica OX=39946 GN=FOS1 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.9e-06 Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy Swiss-Prot
Match: Q9FZE4 (CLAVATA3/ESR (CLE)-related protein 9 OS=Arabidopsis thaliana OX=3702 GN=CLE9 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 6.4e-06 Identity = 21/24 (87.50%), Postives = 24/24 (100.00%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy TrEMBL
Match: A0A0A0KPQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G577440 PE=3 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 7.8e-39 Identity = 90/117 (76.92%), Postives = 94/117 (80.34%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy TrEMBL
Match: A0A6P6BFB8 (CLAVATA3/ESR (CLE)-related protein 12-like OS=Durio zibethinus OX=66656 GN=LOC111317647 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 4.8e-20 Identity = 61/111 (54.95%), Postives = 74/111 (66.67%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy TrEMBL
Match: V4TMC3 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033717mg PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 3.1e-19 Identity = 63/124 (50.81%), Postives = 73/124 (58.87%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy TrEMBL
Match: A0A061EC34 (Clavata3/esr-related 12, putative OS=Theobroma cacao OX=3641 GN=TCM_011877 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18 Identity = 55/104 (52.88%), Postives = 69/104 (66.35%), Query Frame = 0
BLAST of Sed0000064 vs. ExPASy TrEMBL
Match: A0A2R6P497 (CLE13p like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc32896 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18 Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Sed0000064 vs. TAIR 10
Match: AT1G68795.1 (CLAVATA3/ESR-RELATED 12 ) HSP 1 Score: 87.4 bits (215), Expect = 7.5e-18 Identity = 52/111 (46.85%), Postives = 65/111 (58.56%), Query Frame = 0
BLAST of Sed0000064 vs. TAIR 10
Match: AT1G73965.1 (CLAVATA3/ESR-RELATED 13 ) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11 Identity = 49/110 (44.55%), Postives = 60/110 (54.55%), Query Frame = 0
BLAST of Sed0000064 vs. TAIR 10
Match: AT1G26600.1 (CLAVATA3/ESR-RELATED 9 ) HSP 1 Score: 51.6 bits (122), Expect = 4.6e-07 Identity = 21/24 (87.50%), Postives = 24/24 (100.00%), Query Frame = 0
BLAST of Sed0000064 vs. TAIR 10
Match: AT1G69320.1 (CLAVATA3/ESR-RELATED 10 ) HSP 1 Score: 47.8 bits (112), Expect = 6.6e-06 Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 0
BLAST of Sed0000064 vs. TAIR 10
Match: AT1G49005.1 (CLAVATA3/ESR-RELATED 11 ) HSP 1 Score: 41.6 bits (96), Expect = 4.7e-04 Identity = 25/71 (35.21%), Postives = 40/71 (56.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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