Sed0000025 (gene) Chayote v1

Overview


Name	Sed0000025
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CASP-like protein
Location	LG03: 45866060 .. 45870059 (+)
RNA-Seq Expression	Sed0000025
Synteny	Sed0000025

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGATTAGACATTTCTTTATCAGCGAGTAGTTTGGGCAGCCAGCCACCATAAATAAAGGCAGCTGCTTTGTGAACCCTCTGAATTATTTTGTGAAGAAGAAGAAGAAAAAGGAGGAGTTGGAAAATGGGGTTTGGGGATTTAAGAAACGAGGTGTTTCTGAGATTGTTTTCAGTTATTGGGTTGGTTTTGACAATTCTTTTGCTGGCTTTTGATAAGCAAACTACTCAAATCTTTACGGTTGACAAGAAGGCCACTTTCAAGAGTTTGCGAGCTTTCATGTAACCGCCCCTTTTTCTTTCTCTTTAATTCATTTTGAGCTTTCATGTATGTATATATACATAGTGTACCCAGTTATTGATCTTTGTTACTGGGTTATAATTTTTAGTAGATTTTCATAGATTTAGAAACACATGATCGATAATTGAATTAGTTCGTCGCGTGCTGGTTATGTTGATTGGTTGTAGTTCAATTCAATTCCACACTCACAAATTCGATCATGAAAATGAATATTGAGACCCGTAGAACTCTCTAAATAGGGTGTAGTTGAATCTTTTTTTTTTTTGTTATATTTGAATTATTTTTCCTAAAATTTTGATATTGGTAGGATGTTTGTTTAATTAAGTAGTAAGGTATTAAGATAATAAAAAATTGGGTTAACACCAGCTCAAACACCGAATGAGTCTTGATGTAAATCTATTTTCATTTCACAGTCACGGGTTTGCTCCCTAGAATTGGTATTTGTAATATTTATCTCTCAATTTATACTAAAAAAACACCAGCTCAAACCCTTGAAATCCAATTGAGCTTTCATTTTTTTTTAAACAAAATTATTTTATATTTATTTATGAGTGTTTCCATTTAAAATTAATTTAAATAGGTAAGTGGTTACTATAAATTGAATTAAAATTTTTTTTTTTAATCTTTCTTAAGACTTTTGAATCTTGACCATTAGATGGATAAACCTAATAATATAGGTTAAATAAGATTCAATTCATCTTGTTTTGTTTTTAGTTATATAAATATAATTTTTATTATTTTTGTTTTGGAGATAGAGTTGTGATATATGTGGACTCTCTGGGTGCTGCCTACAACTTTCTTCAACTCTGCAAATGTTTGATTTCAGCAAAACCAAAAGGAGTCTCCAAAATTGGGGGTGGTTTTGATATCTACCTATTTTGGATTTCTTTCTTGTTTGACCAGGTATGCCCTAATTTCTCTTTTCTATTTTTTATTTTTGGAGAAAATTTATCTGTTTAAAAAAAAAGCATAATTATATATAAGGAATCTTATCACTATGATATTTATGATGAGACTTATTTTGTTTATCAAAAGTCTAAAACAATGTTCATTTTAATTTTTGAATTTTTAGATTTGTTTTATTTTAGTTTATAAACTTTTTAAATGTTCAATTTTGATTTTGAAATGTTTTCAATTTTTATCATAAATTTTTATATAACTAATTTTAGTCCATGGATTAAAAAAAAAAAGTTGAAAATGGATCCATTATTTTTAAAGTGATTTACTTCTCTCACTCTTTTAAATAATAGACATCACTTTTAATTTCGTGAAGTACTTATAAACATTTAAAAATTTATGAACAAAAAATGAGAGAACTTCAAATCAAATTGAACATTTAATCGTTCATAAATAAAATAAAACCAATCTTAAAATTTAGAAATTAAAACAACATTTTAACAAAAAGAACTCATAAATGATGGAAAAAAATGTATTTATTAGCTCTAGTTTACCTCATCAAAAGAAAGTGGTTGGACTTTCCAACCAGTTGTTAATGGACAACAAAGACTCTGACAAGTTCACAGTTACTGATTTAAATGCCAAACATTATTAAAGTTTAAATTAGGGTTAGAGAATCTCATAATCAAATCCAACATGATAAAACTATAAACTTGTGGCCAATATATGTATATATTTCTAATTTATTTAAAAAATTTCAATAATTTCATAATTTAGTTGTTAATAATACCATTCTCATAAATTTAAAAATTATTTGATAAATTGTGAGTTGGTAAACTTATTTGACTAAAATTAAGTCAGTTCAGTGAAAAAAAAGTATAAGTATATACATACATATATGTACATACATATATACATACATATATGTACATACATATATACATACATATATGTACATACATATATATATATATATATGTATGTACATATATATTATTTATAAGTTCGTAGCTTTTTTTTCTCTCCATGAAGAAGAGAACAAAAGCATCTTCTCAACTTATATTTAAAATTTAAAAAAAATTAAAATCTAAGAGATCAAACAATTAAACCAAAGGTTATAGTCATTAAGACCATAATATTAATGATATATGTATATTCGAATCTCTGAGAGAATGTTATCAAAAAAAAAAATTAAAAAGTTATAAATTTAAAATTTTAATACAAATACGGATTGAATACAAAAAAAGAAAAAAAAACCAACAAGGGGAAGTAAAAATTTTATGTATCTTAAATTATCCAAACTACTCTTAAATTATAGTGTTAGCTTCTTAAAATTACTATTGAACTTTGAAAAATTTAAGAAATACTCCACAACTTTACAAAACATATAAAGATATCTTTGCCGTTAAATTTGGTTAGAAACATTTCAAAATTGTACTTGAATTTTTATGGAGCCAAAGGTATTTTGAAATTTTATATAGTTCAAATGTATTTTTGAAATAAAACTTTAACGGTTTCCATTCAAAATTAATGAAAATGATATTTTTGAAAATTTTTGAAGAGTTAAAGGATAATTTTGACACAAATCTCATAGTTCTAGGACACTTTTAATAATTTAACTCTTTATTTATTAATAACCATTTATTTAATTCTTATTCAACTACTAATTTTTAGAACATTATTTTCAACTACTTGAAATTAGGTTAGCTGGTCCAAAAAAAACTTTAATAATTCAGAAAAAAAACATAACATTTGAAGAATAAAAGTTAGGAGAAATTATTGGTGAAGCTGCTACATTATGTGACAATTTTCTCTCATATTACTTAATTATTAACATTTTTCTCTTTCTCTGAGTTCAATATATATTCGATGGAGTATGACATACATATTATTAAAATTATTAAATTCAAAAAACAATTTTCTCAACTGAGTAACCCCTTTCAAAAACTCTTAAACTAGTACTTTTTCAAAATTTTTTAAAAAATAATAATAAAATTAATAACTAGTAAAGAGAGAAATATAGGTCAATTTCTCTCTCTCAAACTATTAGTCCCCAATTTTCAAAGTTTGGAAAAAGGAGAAATTTTAGTTGAAAATTATTTAGGTGACCTAAATATTAATGTTCACTTATATAGTACATTATGAACTACTTTCTATTCTTTTTTATTCTATTTTTTTTTATCTTTTGTGTTTAACATAAGATCAAATGTGGCATATATTGGGCCACGTAAACAGGCATAATTTTTTAATTCATGCTCGGACATAACCTAAATATCCCTCAGTTTAATTTAGCATTAAAGTAGTTTTGAATGTCATCGACACACCAACAAAAGCATAACTCAGGCGGTATTATATACAATCTAATAAACGAGAGGTTATTCAGGCGGCAACGTACGTGATATTAGGGGCAAACACGGCGGGGATGCAGGCGGCGCTACTGGCGGTGACCGGAGCACACGAGTTTCAATGGATGAAGGTGTGCAACAGATTCAGCAGATTTTGCCACCAAGTTGGCGGAGCTTTTCTCTGTGCCTATGTAGCTTTTTTTGCAATGGTTGCGGTTTCCATCATCTCTGCTTTCCATTTGTTTAGGCATTATTCACCAAACCACTTTCTTACACTTAAATCCAACAAGTGATTCCTTACTTCACTTTTGTAATTCCATGTTTACTTTTAGCCCTTCCAACCCTATGTGCTTACTAGTAAGTACCTAATACAAACTTATCACTTATTTATAAAGATTATAATGTATCACATATTCAAATATTAGCTTTCTCTCATTAATTAAATCATCATTTTCTATA

mRNA sequence

GTGGATTAGACATTTCTTTATCAGCGAGTAGTTTGGGCAGCCAGCCACCATAAATAAAGGCAGCTGCTTTGTGAACCCTCTGAATTATTTTGTGAAGAAGAAGAAGAAAAAGGAGGAGTTGGAAAATGGGGTTTGGGGATTTAAGAAACGAGGTGTTTCTGAGATTGTTTTCAGTTATTGGGTTGGTTTTGACAATTCTTTTGCTGGCTTTTGATAAGCAAACTACTCAAATCTTTACGGTTGACAAGAAGGCCACTTTCAAGAGTTTGCGAGCTTTCATAGTTGTGATATATGTGGACTCTCTGGGTGCTGCCTACAACTTTCTTCAACTCTGCAAATGTTTGATTTCAGCAAAACCAAAAGGAGTCTCCAAAATTGGGGGTGGTTTTGATATCTACCTATTTTGGATTTCTTTCTTGTTTGACCAGGCGGCAACGTACGTGATATTAGGGGCAAACACGGCGGGGATGCAGGCGGCGCTACTGGCGGTGACCGGAGCACACGAGTTTCAATGGATGAAGGTGTGCAACAGATTCAGCAGATTTTGCCACCAAGTTGGCGGAGCTTTTCTCTGTGCCTATGTAGCTTTTTTTGCAATGGTTGCGGTTTCCATCATCTCTGCTTTCCATTTGTTTAGGCATTATTCACCAAACCACTTTCTTACACTTAAATCCAACAAGTGATTCCTTACTTCACTTTTGTAATTCCATGTTTACTTTTAGCCCTTCCAACCCTATGTGCTTACTAGTAAGTACCTAATACAAACTTATCACTTATTTATAAAGATTATAATGTATCACATATTCAAATATTAGCTTTCTCTCATTAATTAAATCATCATTTTCTATA

Coding sequence (CDS)

ATGGGGTTTGGGGATTTAAGAAACGAGGTGTTTCTGAGATTGTTTTCAGTTATTGGGTTGGTTTTGACAATTCTTTTGCTGGCTTTTGATAAGCAAACTACTCAAATCTTTACGGTTGACAAGAAGGCCACTTTCAAGAGTTTGCGAGCTTTCATAGTTGTGATATATGTGGACTCTCTGGGTGCTGCCTACAACTTTCTTCAACTCTGCAAATGTTTGATTTCAGCAAAACCAAAAGGAGTCTCCAAAATTGGGGGTGGTTTTGATATCTACCTATTTTGGATTTCTTTCTTGTTTGACCAGGCGGCAACGTACGTGATATTAGGGGCAAACACGGCGGGGATGCAGGCGGCGCTACTGGCGGTGACCGGAGCACACGAGTTTCAATGGATGAAGGTGTGCAACAGATTCAGCAGATTTTGCCACCAAGTTGGCGGAGCTTTTCTCTGTGCCTATGTAGCTTTTTTTGCAATGGTTGCGGTTTCCATCATCTCTGCTTTCCATTTGTTTAGGCATTATTCACCAAACCACTTTCTTACACTTAAATCCAACAAGTGA

Protein sequence

MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSLGAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALLAVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLTLKSNK

Homology

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BLAST of Sed0000025 vs. NCBI nr
Match: XP_023537147.1 (CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like protein 2C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021022.1 CASP-like protein 2C1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 4.0e-69
Identity = 131/185 (70.81%), Postives = 154/185 (83.24%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSL 60
           MGF D R E  LR F++IGLVLT+LLL FDKQTTQIF +DKKA+F+SL AF+V++YVDSL
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 120
            AAYN LQ+CKC ISA+PKG SK+G G  I LFW SFL DQA  Y++  ANTAGM+AALL
Sbjct: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 180
           AVTGAH+FQWMK+CNRF RFC+QVGGAFLC Y AFFAM A+ +IS+F+LFRHYSPN F  
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKSNK 186
           LKSN+
Sbjct: 181 LKSNE 185

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BLAST of Sed0000025 vs. NCBI nr
Match: XP_022938059.1 (CASP-like protein 2C1 [Cucurbita moschata])

HSP 1 Score: 271.2 bits (692), Expect = 6.8e-69
Identity = 131/185 (70.81%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSL 60
           MGF D R E  LR F++IGLVLT+LLL FDKQTTQIF +DKKA+F+SL AF+V++YVDSL
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 120
            AAYN LQ+CKC ISA PKG SK+G G  I LFW SFL DQA  Y++  ANTAGM+AALL
Sbjct: 61  AAAYNILQICKCWISAHPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 180
           AVTGAH+FQWMK+CNRF RFC+QVGGAFLC Y AFFAM A+ +IS+F+LFRHYSPN F  
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKSNK 186
           LKSN+
Sbjct: 181 LKSNE 185

[Close]

BLAST of Sed0000025 vs. NCBI nr
Match: XP_004149074.1 (CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021217 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-67
Identity = 126/184 (68.48%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSL 60
           MGFGD++ E  LR  ++I LVL++LLL FDK+T QIF VDKKA+FKSLRA +++IYVDS+
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 120
            A YN LQLCKC I A+PKG+SK+G  F IYLFW+SF  DQ A Y+   +NTAGM+AALL
Sbjct: 61  AAGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAALL 120

Query: 121 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 180
           AVTGAH+FQWMK+CNRF RFC+QVGGAFLC Y AFFA++ +S ISAF+LFRHYSPNHFL 
Sbjct: 121 AVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFLR 180

Query: 181 LKSN 185
           LKS+
Sbjct: 181 LKSS 184

[Close]

BLAST of Sed0000025 vs. NCBI nr
Match: XP_022965970.1 (CASP-like protein 2C1 [Cucurbita maxima])

HSP 1 Score: 266.5 bits (680), Expect = 1.7e-67
Identity = 128/185 (69.19%), Postives = 152/185 (82.16%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSL 60
           MGF D + E  LR F++IGLVLT+LLL FDKQTTQIF +DKKA+F+SL AF+V++YVDSL
Sbjct: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 120
            AAYN LQ+C C ISA+PKG SK+G G  I LFW SFL DQA  Y++  ANTAGM+AALL
Sbjct: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 180
           AVTGAH+FQWMK+CNRF RFC+QVGGAFLC Y AFFAM A+ +IS+F+LFRHY PN F  
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180

Query: 181 LKSNK 186
           LKSN+
Sbjct: 181 LKSNE 185

[Close]

BLAST of Sed0000025 vs. NCBI nr
Match: XP_038889630.1 (CASP-like protein 2C1 [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.6e-65
Identity = 122/184 (66.30%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSL 60
           MGFG++R E  LR  ++  LVL++ LL FDKQTTQIF +DKKA+F+SLRA +++IYVDS+
Sbjct: 1   MGFGNVRTEGILRFCAIFLLVLSVCLLGFDKQTTQIFHIDKKASFRSLRALVIIIYVDSM 60

Query: 61  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 120
            A YN LQ+CKC I A+PKG+SK+GG FDIYLFW+SF  DQAA Y+   ANTAGM+A+ L
Sbjct: 61  VAGYNILQICKCWIFAQPKGISKLGGHFDIYLFWLSFFLDQAAVYLTFAANTAGMEASFL 120

Query: 121 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 180
           AVTGA +FQWMK+CNRF RFC+QVGGAFLC Y AF  ++ +S ISAF LFRHYSPNHFL 
Sbjct: 121 AVTGARDFQWMKLCNRFHRFCYQVGGAFLCGYAAFSTLLVISFISAFSLFRHYSPNHFLR 180

Query: 181 LKSN 185
           LKS+
Sbjct: 181 LKSS 184

[Close]

BLAST of Sed0000025 vs. ExPASy Swiss-Prot
Match: A7Q6G6 (CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.6e-42
Identity = 98/182 (53.85%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 2   GFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIF-TVDKKATFKSLRAFIVVIYVDSL 61
           G    R E FLRLF+++ LVLT  LL FD QT  +F T+ K ATF+ L A  VV+YVDS+
Sbjct: 25  GISLARAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSV 84

Query: 62  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 121
            A YN LQL +  ISAK KG  K+     + L W+ FL DQAA Y +  ANTA +QA+++
Sbjct: 85  AAGYNLLQLGRGFISAKLKG--KLINVSYVTLPWVCFLLDQAAVYTVFSANTAALQASII 144

Query: 122 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 181
           AVTG    QWMKVCNR++RFC QVGGA L  Y+A   MV +S +SAF LFR YSP  F  
Sbjct: 145 AVTGESSLQWMKVCNRYTRFCIQVGGALLSGYLASLLMVLLSSLSAFSLFRLYSPKQFHL 204

Query: 182 LK 183
           LK
Sbjct: 205 LK 204

[Close]

BLAST of Sed0000025 vs. ExPASy Swiss-Prot
Match: B9IM09 (CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 SV=2)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 86/174 (49.43%), Postives = 113/174 (64.94%), Query Frame = 0


Query: 9   EVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSLGAAYNFLQ 68
           E  LR  +++ LV T  L+  D QT  +   +K+ T+K L A +V++YVD++ AAYN LQ
Sbjct: 9   EAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAAAYNLLQ 68

Query: 69  LCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALLAVTGAHEF 128
           LC+C +SA  KG  K   G   YL W  F+ DQ A Y    A++A +Q ++L +TGA  F
Sbjct: 69  LCRCSVSALSKGNFK---GSYRYLSWACFVLDQLAAYTTFAAHSAALQHSVLGITGAKVF 128

Query: 129 QWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLTLK 183
           QWMK CNRF+RFC Q+GGA  C Y+A   MV +S ISAF+LFR YSP HFL LK
Sbjct: 129 QWMKWCNRFTRFCFQIGGALTCGYIASVLMVMISFISAFNLFRLYSPKHFLRLK 179

[Close]

BLAST of Sed0000025 vs. ExPASy Swiss-Prot
Match: Q5K4H9 (CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.4e-38
Identity = 80/174 (45.98%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 9   EVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSLGAAYNFLQ 68
           E  +RL +++ LVLT  L+  D QT  IF V KKA+FK LRA + ++Y+ SL AAYN LQ
Sbjct: 9   EALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAAAYNLLQ 68

Query: 69  LCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALLAVTGAHEF 128
           LC    SA  KG S        YL W+ ++ DQA  Y +   N A ++ + L +TG   F
Sbjct: 69  LCCSSFSASYKGTSLQSYA---YLAWLRYILDQAVVYAVFAGNLAALEHSFLVLTGEENF 128

Query: 129 QWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLTLK 183
           QW+K CN+++RFC Q+GG+ LC +VA   M +++ ISAF+LFR YSP  F+ LK
Sbjct: 129 QWLKWCNKYTRFCTQIGGSLLCGFVASLLMFSIASISAFNLFRQYSPTKFMHLK 179

[Close]

BLAST of Sed0000025 vs. ExPASy Swiss-Prot
Match: C6SZ04 (CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-36
Identity = 85/184 (46.20%), Postives = 116/184 (63.04%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIF-TVDKKATFKSLRAFIVVIYVDS 60
           M  G  R EV LR+ +++ LVLT  L+A D QT  +F +++KKAT+K L A  +++YV  
Sbjct: 1   MKLGMARGEVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTC 60

Query: 61  LGAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAAL 120
             A YN L LCK  I ++     K   G  + + WI F  DQ A Y+   ANTA M AA+
Sbjct: 61  AAAGYNLLLLCKHSIWSR-----KNFKGSYLCMAWICFSLDQIAVYMTFAANTATMGAAV 120

Query: 121 LAVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFL 180
           LA++G+  FQW+KVC++F+RFC ++GGA LC Y A   M  +S ISA+ +FR YSP  FL
Sbjct: 121 LAISGSEAFQWLKVCDKFTRFCVEIGGALLCGYAASMLMALISTISAYKVFRMYSPKWFL 179

Query: 181 TLKS 184
            LKS
Sbjct: 181 RLKS 179

[Close]

BLAST of Sed0000025 vs. ExPASy Swiss-Prot
Match: Q8L8U9 (CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-27
Identity = 73/176 (41.48%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 9   EVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSLGAAYNFLQ 68
           EV LRL  V  L+LT  L+  D QT +I  + K  +F+ L A    +Y+D + AAYN +Q
Sbjct: 8   EVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLVQ 67

Query: 69  LCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALLAVTGAHEF 128
           L     + + K  +           W S+L DQ A YV+    +A  Q +LL VTG+ E 
Sbjct: 68  LGLGWYNVEQKTSNP---------KWFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSREL 127

Query: 129 QWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLTLKSN 185
           QWMK C +F+RFC Q+G A +  Y+A   MV +S ISAF+LFR YSP  F   KS+
Sbjct: 128 QWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

[Close]

BLAST of Sed0000025 vs. ExPASy TrEMBL
Match: A0A6J1FCZ2 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444261 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.3e-69
Identity = 131/185 (70.81%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSL 60
           MGF D R E  LR F++IGLVLT+LLL FDKQTTQIF +DKKA+F+SL AF+V++YVDSL
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 120
            AAYN LQ+CKC ISA PKG SK+G G  I LFW SFL DQA  Y++  ANTAGM+AALL
Sbjct: 61  AAAYNILQICKCWISAHPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 180
           AVTGAH+FQWMK+CNRF RFC+QVGGAFLC Y AFFAM A+ +IS+F+LFRHYSPN F  
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKSNK 186
           LKSN+
Sbjct: 181 LKSNE 185

[Close]

BLAST of Sed0000025 vs. ExPASy TrEMBL
Match: A0A0A0LK62 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.2e-68
Identity = 126/184 (68.48%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSL 60
           MGFGD++ E  LR  ++I LVL++LLL FDK+T QIF VDKKA+FKSLRA +++IYVDS+
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 120
            A YN LQLCKC I A+PKG+SK+G  F IYLFW+SF  DQ A Y+   +NTAGM+AALL
Sbjct: 61  AAGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAALL 120

Query: 121 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 180
           AVTGAH+FQWMK+CNRF RFC+QVGGAFLC Y AFFA++ +S ISAF+LFRHYSPNHFL 
Sbjct: 121 AVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFLR 180

Query: 181 LKSN 185
           LKS+
Sbjct: 181 LKSS 184

[Close]

BLAST of Sed0000025 vs. ExPASy TrEMBL
Match: A0A6J1HQ91 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465689 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 8.1e-68
Identity = 128/185 (69.19%), Postives = 152/185 (82.16%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSL 60
           MGF D + E  LR F++IGLVLT+LLL FDKQTTQIF +DKKA+F+SL AF+V++YVDSL
Sbjct: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 120
            AAYN LQ+C C ISA+PKG SK+G G  I LFW SFL DQA  Y++  ANTAGM+AALL
Sbjct: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 180
           AVTGAH+FQWMK+CNRF RFC+QVGGAFLC Y AFFAM A+ +IS+F+LFRHY PN F  
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180

Query: 181 LKSNK 186
           LKSN+
Sbjct: 181 LKSNE 185

[Close]

BLAST of Sed0000025 vs. ExPASy TrEMBL
Match: A0A6J1DH36 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020824 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.6e-62
Identity = 121/182 (66.48%), Postives = 144/182 (79.12%), Query Frame = 0


Query: 3   FGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSLGA 62
           FGD R E  LR  ++IGL+LT+ LL FDKQTTQIF VDKKATF+SLR+ IV++YV+S+ A
Sbjct: 4   FGDPRTEGILRFCAIIGLILTVCLLGFDKQTTQIFHVDKKATFRSLRSLIVIMYVNSVAA 63

Query: 63  AYNFLQLCKCLISAKPK-GVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALLA 122
            YN LQLCKC ISA+PK G SK+G  +DIY+FWISF  DQA  YVI  ANTAG++AALLA
Sbjct: 64  GYNLLQLCKCWISAQPKLGASKLGAHYDIYIFWISFFLDQAIAYVIFAANTAGVEAALLA 123

Query: 123 VTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLTL 182
           +TGA+  QWMK+CNRF+RFC Q GGAFLC Y A   M A+S ISAF+LF HYSP+HFL  
Sbjct: 124 ITGAYNLQWMKLCNRFTRFCFQAGGAFLCGYAASLTMAAISFISAFNLFTHYSPSHFLRP 183

Query: 183 KS 184
           KS
Sbjct: 184 KS 185

[Close]

BLAST of Sed0000025 vs. ExPASy TrEMBL
Match: A0A6J1KBE1 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492374 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 112/184 (60.87%), Postives = 136/184 (73.91%), Query Frame = 0


Query: 1   MGFGDLRNEVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSL 60
           MGFGD R E  LRL ++I LV T+ L+ FDK+TTQIF  DK A+FKSL A  V++YVDS+
Sbjct: 1   MGFGDARTEGILRLCAMICLVFTVFLMGFDKETTQIFGADKTASFKSLGALKVIMYVDSI 60

Query: 61  GAAYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALL 120
            AAYN LQL KC ISA PK   ++   F + LFW+SFL DQA  Y+   ANTAG++AA +
Sbjct: 61  AAAYNILQLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFV 120

Query: 121 AVTGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLT 180
           AV G  EFQWMK+CNRF RFC+Q  GAFLC Y AF  M+ +S +SAF+LF+HYSPNHFL 
Sbjct: 121 AVRGNQEFQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHYSPNHFLH 180

Query: 181 LKSN 185
           LKSN
Sbjct: 181 LKSN 184

[Close]

BLAST of Sed0000025 vs. TAIR 10
Match: AT4G25830.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-28
Identity = 73/176 (41.48%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 9   EVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSLGAAYNFLQ 68
           EV LRL  V  L+LT  L+  D QT +I  + K  +F+ L A    +Y+D + AAYN +Q
Sbjct: 8   EVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLVQ 67

Query: 69  LCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALLAVTGAHEF 128
           L     + + K  +           W S+L DQ A YV+    +A  Q +LL VTG+ E 
Sbjct: 68  LGLGWYNVEQKTSNP---------KWFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSREL 127

Query: 129 QWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHYSPNHFLTLKSN 185
           QWMK C +F+RFC Q+G A +  Y+A   MV +S ISAF+LFR YSP  F   KS+
Sbjct: 128 QWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

[Close]

BLAST of Sed0000025 vs. TAIR 10
Match: AT2G35760.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 102.4 bits (254), Expect = 3.9e-22
Identity = 58/165 (35.15%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 9   EVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSLGAAYNFLQ 68
           E+ LR    +  ++  +L+A D Q  +IF + KKA F  ++A ++++ V+ + A Y+ +Q
Sbjct: 31  ELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGYSLVQ 90

Query: 69  LCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALLAVTGAHEF 128
             +C++     G+ K    F   L W  F  DQA  Y+ +    A  Q+A  A  G  E 
Sbjct: 91  AVRCVV-----GLMKGRVLFSKPLAWAIFFGDQAVAYLCVAGVAAAAQSAAFAKLGEPEL 150

Query: 129 QWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHY 174
           QWMK+CN + +FC+QVG     A  A   MV +S ISAF +FR Y
Sbjct: 151 QWMKICNMYGKFCNQVGEGIASALFACIGMVLISCISAFGVFRLY 190

[Close]

BLAST of Sed0000025 vs. TAIR 10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 88.6 bits (218), Expect = 5.8e-18
Identity = 54/165 (32.73%), Postives = 87/165 (52.73%), Query Frame = 0


Query: 9   EVFLRLFSVIGLVLTILLLAFDKQTTQIFTVDKKATFKSLRAFIVVIYVDSLGAAYNFLQ 68
           E+ LR    +  +L ++L+  D +   IFT+ K A +  ++A + ++  + + A Y+ LQ
Sbjct: 12  ELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVYSLLQ 71

Query: 69  LCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALLAVTGAHEF 128
             +C++     G  K    F   L W  F  DQA  Y+ + A  A  ++ ++A  G  + 
Sbjct: 72  SVRCVV-----GTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEEDL 131

Query: 129 QWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHLFRHY 174
           QWM+VC  + +FC+Q+      A +A  AMV VS ISAF LFR Y
Sbjct: 132 QWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

[Close]

BLAST of Sed0000025 vs. TAIR 10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-05
Identity = 45/167 (26.95%), Postives = 76/167 (45.51%), Query Frame = 0


Query: 12  LRLFSVIGLVLTILLLAFDKQT-----TQIFTVDKKAT----FKSLRAFIVVIYVDSLGA 71
           LR+F+ +  +   ++++ +K+T       I TV  KAT    F+   AF+  +  + + +
Sbjct: 22  LRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVIANVMVS 81

Query: 72  AYNFLQLCKCLISAKPKGVSKIGGGFDIYLFWISFLFDQAATYVILGANTAGMQAALLAV 131
            +N L +   + S K +          + L  I+ L    AT V   AN A +  A L  
Sbjct: 82  FHNLLMIVVQIFSRKLEYKG-------LRLLSIAILDMLNATLVSAAAN-AAVFVAELGK 141

Query: 132 TGAHEFQWMKVCNRFSRFCHQVGGAFLCAYVAFFAMVAVSIISAFHL 170
            G    +W KVC+RF+ +C    GA + A+     M+ VS +S   L
Sbjct: 142 NGNKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSISRL 180

The following BLAST results are available for this feature:

BLAST of Sed0000025 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537147.1	4.0e-69	70.81	CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like prote...	[more]
XP_022938059.1	6.8e-69	70.81	CASP-like protein 2C1 [Cucurbita moschata]	[more]
XP_004149074.1	1.3e-67	68.48	CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021...	[more]
XP_022965970.1	1.7e-67	69.19	CASP-like protein 2C1 [Cucurbita maxima]	[more]
XP_038889630.1	1.6e-65	66.30	CASP-like protein 2C1 [Benincasa hispida]	[more]

BLAST of Sed0000025 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7Q6G6	5.6e-42	53.85	CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1	[more]
B9IM09	1.1e-40	49.43	CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 S...	[more]
Q5K4H9	8.4e-38	45.98	CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1	[more]
C6SZ04	6.0e-36	46.20	CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q8L8U9	2.3e-27	41.48	CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1	[more]

BLAST of Sed0000025 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCZ2	3.3e-69	70.81	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444261 PE=3 SV=1	[more]
A0A0A0LK62	6.2e-68	68.48	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1	[more]
A0A6J1HQ91	8.1e-68	69.19	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465689 PE=3 SV=1	[more]
A0A6J1DH36	6.6e-62	66.48	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020824 PE=3 SV=1	[more]
A0A6J1KBE1	1.2e-55	60.87	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492374 PE=3 SV=1	[more]

BLAST of Sed0000025 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25830.1	1.6e-28	41.48	Uncharacterised protein family (UPF0497)	[more]
AT2G35760.1	3.9e-22	35.15	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	5.8e-18	32.73	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	2.5e-05	26.95	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 11..169 e-value: 4.0E-25 score: 86.4
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 9..157 e-value: 2.7E-30 score: 105.2
None	No IPR available	PANTHER	PTHR11615:SF241	CASP-LIKE PROTEIN 2C1	coord: 4..183
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000025.1	Sed0000025.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding