Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTCTATCTCACCACTTTAAATTTGGCAAAGTTTCTTATAGAGTGTGCTTCCATTTTACCTGAGGGAGAAACTAACAAAGAAAAGCAACTTGCAATTGATGTATGGAAACATGCAGAATATCTTTGCAAAAATTACATTCTGAATGGATTGGACAACACGCTGTACAATGAGTATAGTAGTGTTGATTCAGCAAAAAATCTATGGACTTCATTAGAGAAGAAGTACAAATCTGAAGTTGTTGGTGCAAAAAAATTTATCGTTGGAAAATTTCTGGATTACAAAATGGTGGACTCCAAAACTGTAATCAGTTAGGTTCAGGAAATCCAGGTAATCGTACATGATATACATGCTGAGAATATGACTTTAAGTGAGTATTTTCAGGTAGCATCAATAATTGAAAAATTTCCACCCTCATGGAAGGACTTCAAAAATTATCTCAAGCATAAACGCAAAAAGATAAAGCTTGAGGAACTTGTAGTTCGACTTGGGATTGAAGAGAATAATAGAAAGGCAGAAAAGTGTATTATAGATAGTACAATAGACCCCAAGGCCATTATTGTGGAAAATAAACCACACAGTAACAAGAAAAGGAAATTTTTTGGTGAAGGTTCAAATAAAAACCCGCGATTCACAAAAAAGTTCAATGGCAAGTGCTTCAACTGCAACAAAATGGGACATCAATCTAAGGATTGTCGTAAACAAAAGAACTTTCAGAAAAACATGTTCAAGCTCATATCACAGAAGTTGATGAAGTATCAGATGGTGTTGCAGATATTGACCTTTGTGCAGTCATTTCAGAGTGCAACATGGTGGGCAATTCCAAGGAATGGTCGGTAGACACTGGTGCTACTCGTCATATTTGTGCCAACAAGAATATGTTCACTTCATATGTGTCGTTTCTAATGGAGAACAATTATTTATGGGTAACTCCTCTACGTCAAAGGTCGAGGGACAAGGAAAAGTAATTCTTAAGATGACCTCTAGGAAGGAACTCACTCTCAACAATGTGCTTCATGTTCGTGACATTCGCAAGAACTTAGTTTCTGGTTCATTACTTAGTAAGAATGGCTTTAAGTTGGTCTTTGTATCTGATAAATTTGTACTTTCCAAGAATGAGATGTACAATGGAAAAGGTTATGTGAGTGATGGTCCTTTAACATAAATGTCTCACAGTTGTACCAAAAGGTATAATAATAATAAAGTATCTACTTTTTGTTATATTGTTGAGTCATTTGTTTGGCATGGCAGACTAGGACATGTCAACTTCAATTTTTTTGCGTAG
mRNA sequence
ATGTTGTTCTATCTCACCACTTTAAATTTGGCAAAGTTTCTTATAGAGTGTGCTTCCATTTTACCTGAGGGAGAAACTAACAAAGAAAAGCAACTTGCAATTGATGTATGGAAACATGCAGAATATCTTTGCAAAAATTACATTCTGAATGGATTGGACAACACGCTGTACAATGAGTATAGTAGTGTTGATTCAGCAAAAAATCTATGGACTTCATTAGAGAAGAAGTACAAATCTGAAGTTGTTGGTGCAAAAAAATTTATCGTTGGAAAATTTCTGGATTACAAAATGGAAATCCAGGTAATCGTACATGATATACATGCTGAGAATATGACTTTAAGTGAGTATTTTCAGGTAGCATCAATAATTGAAAAATTTCCACCCTCATGGAAGGACTTCAAAAATTATCTCAAGCATAAACGCAAAAAGATAAAGCTTGAGGAACTTGTAGTTCGACTTGGGATTGAAGAGAATAATAGAAAGGCAGAAAAGTGTATTATAGATAGTACAATAGACCCCAAGGCCATTATTGTGGAAAATAAACCACACAGTAACAAGAAAAGGAAATTTTTTGGTGAAGGTTCAAATAAAAACCCGCGATTCACAAAAAAGTTCAATGGCAAGTGCTTCAACTGCAACAAAATGGGACATCAATCTAAGGATTGTCGTAAACAAAAGAACTTTCAGAAAAACATGTTCAAGCTCATATCACAGAAGTTGATGAAGTATCAGATGGTCGAGGGACAAGGAAAAGTAATTCTTAAGATGACCTCTAGGAAGGAACTCACTCTCAACAATGTGCTTCATGTTCGTGACATTCGCAAGAACTTAGTTTCTGGTTCATTACTTAGTAAGAATGGCTTTAAGTTGGTCTTTGTATCTGATAAATTTGTACTTTCCAAGAATGAGATTTGTACCAAAAGGTATAATAATAATAAAGTATCTACTTTTTGTTATATTGTTGAGTCATTTGTTTGGCATGGCAGACTAGGACATGTCAACTTCAATTTTTTTGCGTAG
Coding sequence (CDS)
ATGTTGTTCTATCTCACCACTTTAAATTTGGCAAAGTTTCTTATAGAGTGTGCTTCCATTTTACCTGAGGGAGAAACTAACAAAGAAAAGCAACTTGCAATTGATGTATGGAAACATGCAGAATATCTTTGCAAAAATTACATTCTGAATGGATTGGACAACACGCTGTACAATGAGTATAGTAGTGTTGATTCAGCAAAAAATCTATGGACTTCATTAGAGAAGAAGTACAAATCTGAAGTTGTTGGTGCAAAAAAATTTATCGTTGGAAAATTTCTGGATTACAAAATGGAAATCCAGGTAATCGTACATGATATACATGCTGAGAATATGACTTTAAGTGAGTATTTTCAGGTAGCATCAATAATTGAAAAATTTCCACCCTCATGGAAGGACTTCAAAAATTATCTCAAGCATAAACGCAAAAAGATAAAGCTTGAGGAACTTGTAGTTCGACTTGGGATTGAAGAGAATAATAGAAAGGCAGAAAAGTGTATTATAGATAGTACAATAGACCCCAAGGCCATTATTGTGGAAAATAAACCACACAGTAACAAGAAAAGGAAATTTTTTGGTGAAGGTTCAAATAAAAACCCGCGATTCACAAAAAAGTTCAATGGCAAGTGCTTCAACTGCAACAAAATGGGACATCAATCTAAGGATTGTCGTAAACAAAAGAACTTTCAGAAAAACATGTTCAAGCTCATATCACAGAAGTTGATGAAGTATCAGATGGTCGAGGGACAAGGAAAAGTAATTCTTAAGATGACCTCTAGGAAGGAACTCACTCTCAACAATGTGCTTCATGTTCGTGACATTCGCAAGAACTTAGTTTCTGGTTCATTACTTAGTAAGAATGGCTTTAAGTTGGTCTTTGTATCTGATAAATTTGTACTTTCCAAGAATGAGATTTGTACCAAAAGGTATAATAATAATAAAGTATCTACTTTTTGTTATATTGTTGAGTCATTTGTTTGGCATGGCAGACTAGGACATGTCAACTTCAATTTTTTTGCGTAG
Protein sequence
MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKLMKYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNEICTKRYNNNKVSTFCYIVESFVWHGRLGHVNFNFFA
Homology
BLAST of Pay0019187 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 1.1e-06
Identity = 78/402 (19.40%), Postives = 148/402 (36.82%), Query Frame = 0
Query: 25 ETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEYSSVDSAKNLWTSLEKKYKSEVVGA 84
++ K + + W + + I L + + N D+A+ +WT LE Y S+ +
Sbjct: 40 DSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTN 99
Query: 85 KKFIVGK-----------FLDYKMEIQVIVHDIHAENMTLSEYFQVASIIEKFPPSWKDF 144
K ++ + FL + ++ + + + E + ++ P S+ +
Sbjct: 100 KLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNL 159
Query: 145 KNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVENKPH-----SNKKR 204
+ H + I+L+++ L + E RK + +A+I E + SN
Sbjct: 160 ATTILHGKTTIELKDVTSALLLNEKMRKKPE------NQGQALITEGRGRSYQRSSNNYG 219
Query: 205 KFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDC---RKQK---NFQKN----------- 264
+ G +KN ++ N C+NCN+ GH +DC RK K + QKN
Sbjct: 220 RSGARGKSKNRSKSRVRN--CYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNN 279
Query: 265 ----------------------------------------------MFKLISQKLMKYQM 324
F + Y
Sbjct: 280 DNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSK 339
Query: 325 VEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNEIC 335
+ G G + +K L L +V HV D+R NL+SG L ++G++ F + K+ L+K +
Sbjct: 340 IAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLV 399
BLAST of Pay0019187 vs. ExPASy TrEMBL
Match:
A0A5D3BUY6 (Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold755G00050 PE=4 SV=1)
HSP 1 Score: 455.7 bits (1171), Expect = 1.7e-124
Identity = 251/321 (78.19%), Postives = 266/321 (82.87%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYLTTLNLAKFL E A ILPEGET+KEKQLA+D WKHAEYLCKNYILNGLD TLYNEY
Sbjct: 1 MLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDYTLYNEY 60
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQVIVHDIHAENMTLSEYFQVA 120
SSVDSAKNLWTSLE KYK+EV GAKKFIVGKFLDYKM ++ T VA
Sbjct: 61 SSVDSAKNLWTSLENKYKTEVAGAKKFIVGKFLDYKM----------VDSKT------VA 120
Query: 121 SIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVEN 180
SIIEK PPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID KAI+VEN
Sbjct: 121 SIIEKLPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDLKAIVVEN 180
Query: 181 KPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKL 240
+PHSNKKRKF GEGSNKNPRFTKKFNGKCFNCNKMGHQSKDC ++ +IS+
Sbjct: 181 RPHSNKKRKFSGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDC------HIDLCAVISECN 240
Query: 241 M----KYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDK 300
M K VE QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDK
Sbjct: 241 MVGNSKEWWVERQGKVILKMTSRKELTLNNVLHVSDIRKNLVSGSLLSKNGFKLVFVSDK 299
Query: 301 FVLSKNEI-CTKRYNNNKVST 317
FVLSKNE+ K Y ++ V+T
Sbjct: 301 FVLSKNEMYIGKGYLSDGVTT 299
BLAST of Pay0019187 vs. ExPASy TrEMBL
Match:
A0A5A7THY2 (Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001460 PE=4 SV=1)
HSP 1 Score: 420.2 bits (1079), Expect = 8.0e-114
Identity = 242/365 (66.30%), Postives = 252/365 (69.04%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYLTTLNLAKFL E A IL EGET+KEKQLA+D WKHA YLCKNY LNGLDNTLYN Y
Sbjct: 1 MLFYLTTLNLAKFLKEDAPILLEGETDKEKQLAVDAWKHAGYLCKNYTLNGLDNTLYNVY 60
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQVIVHDIHAENMTLSEYFQVA 120
SSVDS KNLWTSLEKKY+ EV G KKFIVGKFLDYKM ++ T VA
Sbjct: 61 SSVDSTKNLWTSLEKKYQIEVAGVKKFIVGKFLDYKM----------VDSKT------VA 120
Query: 121 SIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVEN 180
SIIEK PPSWKDFKNYLKHKRK+IKLEELVVRLGIEENNRKAEKCIIDS IDPKA IVEN
Sbjct: 121 SIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKAEKCIIDSRIDPKANIVEN 180
Query: 181 KPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNFQ----------- 240
+PHSNKKRKFFGEGSNK PRFTKK N KCFNCNKMGHQSKD K KNFQ
Sbjct: 181 RPHSNKKRKFFGEGSNKKPRFTKKLNDKCFNCNKMGHQSKDYHKPKNFQKKHVQAHITEV 240
Query: 241 -----------------------------------------KNMFKLISQKLMKYQM--- 300
KNMF Q+
Sbjct: 241 DEVSDGVVDIDLCAVISECNMVGNSKEWWVDTGATRHICANKNMFTSYVSVSNGEQLFMG 300
Query: 301 ------VEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVL 305
V+ QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDKFV
Sbjct: 301 NSFTSKVKAQGKVILKMTSRKELTLNNVLHVPDIRKNLVSGSLLSKNGFKLVFVSDKFVF 349
BLAST of Pay0019187 vs. ExPASy TrEMBL
Match:
A0A5A7SSS0 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00180 PE=4 SV=1)
HSP 1 Score: 396.0 bits (1016), Expect = 1.6e-106
Identity = 201/230 (87.39%), Postives = 208/230 (90.43%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYL TLNLAKFL E A ILPEGETNKEKQLA+D WKHAEYLCKNYILNGLDNTLYN Y
Sbjct: 35 MLFYLITLNLAKFLKEDAPILPEGETNKEKQLAVDAWKHAEYLCKNYILNGLDNTLYNVY 94
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM--------EIQVIVHDIHAENMT 120
SSVDSAKNLWTSLEKKYK+EV GAKKFIVGKFLDYKM ++QVI+HDIHAENMT
Sbjct: 95 SSVDSAKNLWTSLEKKYKTEVAGAKKFIVGKFLDYKMVNSKTVISQVQVILHDIHAENMT 154
Query: 121 LSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID 180
LSE FQVASIIEK PPSWKDFKNYLKHKRK+IKLEELVVRLGIEENNRKAEKCIIDSTID
Sbjct: 155 LSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKAEKCIIDSTID 214
Query: 181 PKAIIVENKPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDC 223
KA IVEN+PHSNKKRKF EGSNK PRFTKKFNGKCFNCNKMGHQSKDC
Sbjct: 215 HKANIVENRPHSNKKRKFSCEGSNKKPRFTKKFNGKCFNCNKMGHQSKDC 264
BLAST of Pay0019187 vs. ExPASy TrEMBL
Match:
A0A1S3CTZ4 (uncharacterized protein LOC103504514 OS=Cucumis melo OX=3656 GN=LOC103504514 PE=4 SV=1)
HSP 1 Score: 387.5 bits (994), Expect = 5.7e-104
Identity = 218/307 (71.01%), Postives = 235/307 (76.55%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYLTTLNLAKFL E A ILPEGET+KEKQLA+D WKHAEYLCKNYILNGLD TLYNEY
Sbjct: 1 MLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDYTLYNEY 60
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM-EIQVIVHDIHAENMTLSEYFQV 120
SSVDSAKNLWTSLE KYK+EV GAKKFIVGKFLDYKM + + ++ + + QV
Sbjct: 61 SSVDSAKNLWTSLENKYKTEVAGAKKFIVGKFLDYKMVDSKTVISQV--------QEIQV 120
Query: 121 ASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVE 180
ASIIEK PPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID KAI+VE
Sbjct: 121 ASIIEKLPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDLKAIVVE 180
Query: 181 NKPHSNKKRKFFGEGSNKNPRFTKKFN--GKCFNCNKMGHQSKDCRKQKNFQKNMFKLIS 240
N+PHSNKKRKF GE ++ + CN +G+
Sbjct: 181 NRPHSNKKRKFSGEEVDEVSDGVADIDLCAVISECNMVGNS------------------- 240
Query: 241 QKLMKYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKF 300
K VE QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDKF
Sbjct: 241 ----KEWWVERQGKVILKMTSRKELTLNNVLHVSDIRKNLVSGSLLSKNGFKLVFVSDKF 276
Query: 301 VLSKNEI 305
VLSKNE+
Sbjct: 301 VLSKNEM 276
BLAST of Pay0019187 vs. ExPASy TrEMBL
Match:
A5CBN2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_016964 PE=4 SV=1)
HSP 1 Score: 377.9 bits (969), Expect = 4.5e-101
Identity = 212/388 (54.64%), Postives = 265/388 (68.30%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYLTTLNLA+FL E IL EGETNKEK +D WKH+++LC+NY+LNGLDNTLYN Y
Sbjct: 226 MLFYLTTLNLARFLHEECPILEEGETNKEKVAVVDAWKHSDFLCRNYMLNGLDNTLYNVY 285
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM-----------EIQVIVHDIHAE 120
S+ +AK LW SL+KKYK+E G KKFIVGKFLD+KM E+QVI+H+IH+E
Sbjct: 286 CSLKTAKELWDSLDKKYKTEDAGIKKFIVGKFLDFKMIDSKTVISQVQELQVILHEIHSE 345
Query: 121 NMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDS 180
M+ S+ FQVA++IEK PP WKDFKNYLKHKRK++ LEEL+VRL IEE+NRK+EK ++
Sbjct: 346 GMSFSDSFQVAAVIEKLPPLWKDFKNYLKHKRKEMNLEELIVRLRIEEDNRKSEK-KGNN 405
Query: 181 TIDPKAIIVENKPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNF- 240
+++ KA ++E P +NKKRK + N+ KKF GKC+NC K GH+S D R K +
Sbjct: 406 SMEAKANVIEQGPKTNKKRKHGDQNQNQESNVAKKFKGKCYNCGKTGHKSNDYRNTKEWW 465
Query: 241 -----------QKNMF---KLISQKLMKY------QMVEGQGKVILKMTSRKELTLNNVL 300
K MF K + Q + +EG+GKVILKMTS KELTLN+VL
Sbjct: 466 VDTGATRHICSNKWMFSTYKPVEQNEELFMGNSSSSKIEGRGKVILKMTSGKELTLNDVL 525
Query: 301 HVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNE-------------------ICTKRY 337
HV DI KNLVSGSLLSKNGFKLVFVSDKFVL+KNE + K
Sbjct: 526 HVPDICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGLFKMNVMTVVPKSI 585
BLAST of Pay0019187 vs. NCBI nr
Match:
TYK02905.1 (pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 455.7 bits (1171), Expect = 3.5e-124
Identity = 251/321 (78.19%), Postives = 266/321 (82.87%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYLTTLNLAKFL E A ILPEGET+KEKQLA+D WKHAEYLCKNYILNGLD TLYNEY
Sbjct: 1 MLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDYTLYNEY 60
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQVIVHDIHAENMTLSEYFQVA 120
SSVDSAKNLWTSLE KYK+EV GAKKFIVGKFLDYKM ++ T VA
Sbjct: 61 SSVDSAKNLWTSLENKYKTEVAGAKKFIVGKFLDYKM----------VDSKT------VA 120
Query: 121 SIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVEN 180
SIIEK PPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID KAI+VEN
Sbjct: 121 SIIEKLPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDLKAIVVEN 180
Query: 181 KPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNFQKNMFKLISQKL 240
+PHSNKKRKF GEGSNKNPRFTKKFNGKCFNCNKMGHQSKDC ++ +IS+
Sbjct: 181 RPHSNKKRKFSGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDC------HIDLCAVISECN 240
Query: 241 M----KYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDK 300
M K VE QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDK
Sbjct: 241 MVGNSKEWWVERQGKVILKMTSRKELTLNNVLHVSDIRKNLVSGSLLSKNGFKLVFVSDK 299
Query: 301 FVLSKNEI-CTKRYNNNKVST 317
FVLSKNE+ K Y ++ V+T
Sbjct: 301 FVLSKNEMYIGKGYLSDGVTT 299
BLAST of Pay0019187 vs. NCBI nr
Match:
KAA0042920.1 (pol polyprotein [Cucumis melo var. makuwa] >TYK05320.1 pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 420.2 bits (1079), Expect = 1.6e-113
Identity = 242/365 (66.30%), Postives = 252/365 (69.04%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYLTTLNLAKFL E A IL EGET+KEKQLA+D WKHA YLCKNY LNGLDNTLYN Y
Sbjct: 1 MLFYLTTLNLAKFLKEDAPILLEGETDKEKQLAVDAWKHAGYLCKNYTLNGLDNTLYNVY 60
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKMEIQVIVHDIHAENMTLSEYFQVA 120
SSVDS KNLWTSLEKKY+ EV G KKFIVGKFLDYKM ++ T VA
Sbjct: 61 SSVDSTKNLWTSLEKKYQIEVAGVKKFIVGKFLDYKM----------VDSKT------VA 120
Query: 121 SIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVEN 180
SIIEK PPSWKDFKNYLKHKRK+IKLEELVVRLGIEENNRKAEKCIIDS IDPKA IVEN
Sbjct: 121 SIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKAEKCIIDSRIDPKANIVEN 180
Query: 181 KPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNFQ----------- 240
+PHSNKKRKFFGEGSNK PRFTKK N KCFNCNKMGHQSKD K KNFQ
Sbjct: 181 RPHSNKKRKFFGEGSNKKPRFTKKLNDKCFNCNKMGHQSKDYHKPKNFQKKHVQAHITEV 240
Query: 241 -----------------------------------------KNMFKLISQKLMKYQM--- 300
KNMF Q+
Sbjct: 241 DEVSDGVVDIDLCAVISECNMVGNSKEWWVDTGATRHICANKNMFTSYVSVSNGEQLFMG 300
Query: 301 ------VEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKFVL 305
V+ QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDKFV
Sbjct: 301 NSFTSKVKAQGKVILKMTSRKELTLNNVLHVPDIRKNLVSGSLLSKNGFKLVFVSDKFVF 349
BLAST of Pay0019187 vs. NCBI nr
Match:
KAA0032601.1 (uncharacterized protein E6C27_scaffold43053G00700 [Cucumis melo var. makuwa] >TYK20884.1 uncharacterized protein E5676_scaffold284G00180 [Cucumis melo var. makuwa])
HSP 1 Score: 396.0 bits (1016), Expect = 3.3e-106
Identity = 201/230 (87.39%), Postives = 208/230 (90.43%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYL TLNLAKFL E A ILPEGETNKEKQLA+D WKHAEYLCKNYILNGLDNTLYN Y
Sbjct: 35 MLFYLITLNLAKFLKEDAPILPEGETNKEKQLAVDAWKHAEYLCKNYILNGLDNTLYNVY 94
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM--------EIQVIVHDIHAENMT 120
SSVDSAKNLWTSLEKKYK+EV GAKKFIVGKFLDYKM ++QVI+HDIHAENMT
Sbjct: 95 SSVDSAKNLWTSLEKKYKTEVAGAKKFIVGKFLDYKMVNSKTVISQVQVILHDIHAENMT 154
Query: 121 LSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID 180
LSE FQVASIIEK PPSWKDFKNYLKHKRK+IKLEELVVRLGIEENNRKAEKCIIDSTID
Sbjct: 155 LSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKAEKCIIDSTID 214
Query: 181 PKAIIVENKPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDC 223
KA IVEN+PHSNKKRKF EGSNK PRFTKKFNGKCFNCNKMGHQSKDC
Sbjct: 215 HKANIVENRPHSNKKRKFSCEGSNKKPRFTKKFNGKCFNCNKMGHQSKDC 264
BLAST of Pay0019187 vs. NCBI nr
Match:
XP_008467076.1 (PREDICTED: uncharacterized protein LOC103504514, partial [Cucumis melo])
HSP 1 Score: 387.5 bits (994), Expect = 1.2e-103
Identity = 218/307 (71.01%), Postives = 235/307 (76.55%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYLTTLNLAKFL E A ILPEGET+KEKQLA+D WKHAEYLCKNYILNGLD TLYNEY
Sbjct: 1 MLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDYTLYNEY 60
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM-EIQVIVHDIHAENMTLSEYFQV 120
SSVDSAKNLWTSLE KYK+EV GAKKFIVGKFLDYKM + + ++ + + QV
Sbjct: 61 SSVDSAKNLWTSLENKYKTEVAGAKKFIVGKFLDYKMVDSKTVISQV--------QEIQV 120
Query: 121 ASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDPKAIIVE 180
ASIIEK PPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTID KAI+VE
Sbjct: 121 ASIIEKLPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDSTIDLKAIVVE 180
Query: 181 NKPHSNKKRKFFGEGSNKNPRFTKKFN--GKCFNCNKMGHQSKDCRKQKNFQKNMFKLIS 240
N+PHSNKKRKF GE ++ + CN +G+
Sbjct: 181 NRPHSNKKRKFSGEEVDEVSDGVADIDLCAVISECNMVGNS------------------- 240
Query: 241 QKLMKYQMVEGQGKVILKMTSRKELTLNNVLHVRDIRKNLVSGSLLSKNGFKLVFVSDKF 300
K VE QGKVILKMTSRKELTLNNVLHV DIRKNLVSGSLLSKNGFKLVFVSDKF
Sbjct: 241 ----KEWWVERQGKVILKMTSRKELTLNNVLHVSDIRKNLVSGSLLSKNGFKLVFVSDKF 276
Query: 301 VLSKNEI 305
VLSKNE+
Sbjct: 301 VLSKNEM 276
BLAST of Pay0019187 vs. NCBI nr
Match:
CAN66576.1 (hypothetical protein VITISV_016964 [Vitis vinifera])
HSP 1 Score: 377.9 bits (969), Expect = 9.4e-101
Identity = 212/388 (54.64%), Postives = 265/388 (68.30%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIECASILPEGETNKEKQLAIDVWKHAEYLCKNYILNGLDNTLYNEY 60
MLFYLTTLNLA+FL E IL EGETNKEK +D WKH+++LC+NY+LNGLDNTLYN Y
Sbjct: 226 MLFYLTTLNLARFLHEECPILEEGETNKEKVAVVDAWKHSDFLCRNYMLNGLDNTLYNVY 285
Query: 61 SSVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM-----------EIQVIVHDIHAE 120
S+ +AK LW SL+KKYK+E G KKFIVGKFLD+KM E+QVI+H+IH+E
Sbjct: 286 CSLKTAKELWDSLDKKYKTEDAGIKKFIVGKFLDFKMIDSKTVISQVQELQVILHEIHSE 345
Query: 121 NMTLSEYFQVASIIEKFPPSWKDFKNYLKHKRKKIKLEELVVRLGIEENNRKAEKCIIDS 180
M+ S+ FQVA++IEK PP WKDFKNYLKHKRK++ LEEL+VRL IEE+NRK+EK ++
Sbjct: 346 GMSFSDSFQVAAVIEKLPPLWKDFKNYLKHKRKEMNLEELIVRLRIEEDNRKSEK-KGNN 405
Query: 181 TIDPKAIIVENKPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCNKMGHQSKDCRKQKNF- 240
+++ KA ++E P +NKKRK + N+ KKF GKC+NC K GH+S D R K +
Sbjct: 406 SMEAKANVIEQGPKTNKKRKHGDQNQNQESNVAKKFKGKCYNCGKTGHKSNDYRNTKEWW 465
Query: 241 -----------QKNMF---KLISQKLMKY------QMVEGQGKVILKMTSRKELTLNNVL 300
K MF K + Q + +EG+GKVILKMTS KELTLN+VL
Sbjct: 466 VDTGATRHICSNKWMFSTYKPVEQNEELFMGNSSSSKIEGRGKVILKMTSGKELTLNDVL 525
Query: 301 HVRDIRKNLVSGSLLSKNGFKLVFVSDKFVLSKNE-------------------ICTKRY 337
HV DI KNLVSGSLLSKNGFKLVFVSDKFVL+KNE + K
Sbjct: 526 HVPDICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGLFKMNVMTVVPKSI 585
BLAST of Pay0019187 vs. TAIR 10
Match:
AT4G00980.1 (zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 64.7 bits (156), Expect = 1.6e-10
Identity = 70/257 (27.24%), Postives = 111/257 (43.19%), Query Frame = 0
Query: 1 MLFYLTTLNLAKFLIE-CASI-LPEG-ETNKEKQLAIDV----WKHAEYLCKNYILNGLD 60
M +L L L L E C SI +G ETN + D W +YLC +++N L
Sbjct: 210 MELFLKQLKLTYVLSEPCPSIGSSQGPETNPREITRADATGKKWLRDDYLCYTHLMNSLS 269
Query: 61 NTLYNEYS-SVDSAKNLWTSLEKKYKSEVVGAKKFIVGKFLDYKM--------EIQV--- 120
+ LY YS AK LW L+ Y+ + +K+ V K+++++M ++QV
Sbjct: 270 DHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQVRKYIEFRMVEERPILEQVQVFNK 329
Query: 121 IVHDIHAENMTLSEYFQVASIIEKFPPSWKDFKNYLKHKR--------KKIKLEELVVRL 180
I I + M L E F V++II KFPPSW+ F L + +++K EE ++R
Sbjct: 330 IADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCTRLMEEEYLPVWMLMERVKAEEELLRN 389
Query: 181 GIEENNRKAEKCIIDSTIDPKAIIVENKPHSNKKRKFFGEGSNKNPRFTKKFNGKCFNCN 231
G + + P S ++ K P ++ C NC
Sbjct: 390 GAKGVTYRPATGSSQMERTPSLGTTHRGSQSVGWKR-------KEPERDERVIIVCDNCG 449
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 1.1e-06 | 19.40 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BUY6 | 1.7e-124 | 78.19 | Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold755G0005... | [more] |
A0A5A7THY2 | 8.0e-114 | 66.30 | Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G0014... | [more] |
A0A5A7SSS0 | 1.6e-106 | 87.39 | CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A1S3CTZ4 | 5.7e-104 | 71.01 | uncharacterized protein LOC103504514 OS=Cucumis melo OX=3656 GN=LOC103504514 PE=... | [more] |
A5CBN2 | 4.5e-101 | 54.64 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_016964 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
TYK02905.1 | 3.5e-124 | 78.19 | pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0042920.1 | 1.6e-113 | 66.30 | pol polyprotein [Cucumis melo var. makuwa] >TYK05320.1 pol polyprotein [Cucumis ... | [more] |
KAA0032601.1 | 3.3e-106 | 87.39 | uncharacterized protein E6C27_scaffold43053G00700 [Cucumis melo var. makuwa] >TY... | [more] |
XP_008467076.1 | 1.2e-103 | 71.01 | PREDICTED: uncharacterized protein LOC103504514, partial [Cucumis melo] | [more] |
CAN66576.1 | 9.4e-101 | 54.64 | hypothetical protein VITISV_016964 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
AT4G00980.1 | 1.6e-10 | 27.24 | zinc knuckle (CCHC-type) family protein | [more] |