Pay0018939 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCCGCACTAAGGAAGGGACGAGTTGTAGGAAGGGAGGGGTAAACTGGTGATTTCGCATTCAAACAACGGGCTTTAACTCACGTGTCCGGATCTGTTGAGAGGGAACAATTCACAGCGAGGAAATTGCAAATAACACACAAAGGAAACACAAAAGAGCGGAAAGCAAATGTGAAGAGACGAAGAGTAGCCAATGAGAAAAAAGGACGAGGATCGATGACATGGCAAAAGATTTTTGAAATCCCGCCTAAACCCGGAGTTTCAATTGATATCGCGATTTATCTCTCCCTCTCTTTAACGAAACCGACTCCCTTCATATCCCTCTCTCTCGCTCCCTCTTCACTTCAAAGGGCTTTTCCTTCTTTCCACATAAACACACGCACTCGAAGCCAATCTCAAAACCGCATCACACGAACCAAACTAAGCCTAACCCAATTTTTTCTCCTCATATTTCACTCTCACACTCTTTCCTTATCTTCTTCTTCCCCCAAACCCTAGAGTTTTACAGGTAAACTCCCAATCTCTCCGCCGCTCCCTCGCTCGATTCTCCTTCGTTTCTCCGCCTTTTTTCTTATAATCATTACCTGTTTTCTCCTTCCCTCTATCTGCAGGATTCATCATGAAGGGCGGTAAATCCAAGGGGGCGCCTAAAAAGACCGATACCAAGTGAGTTCATCGATAACTTTTTATGTATATTTTTATCTATATGTGTTAGTATGTTTCGGAGTAGGCAGTTGGATCGGATACGTTCGTTTTGTAATGTTTGATTCTCTTCTCAGTTATTTATTATGTGTTTTGTTATTTGATTATTGTTAGGTTGAAGAGCAAAAGTGCCGGAGCTAGTAAGAAATCAGCGAAGGCTGCAAAGGATCCTAACAAGCCGAAGAGGCCTGCTAGTGCTTTCTTCGTTTTCATGTACATCTCTCTTTCTCAAACCTATCCTGTTTTTTACCTTCGATTTTCAGATCCGTATTTTTTGTGGAATTTTTTCTGGTTTGATTTATTTGTTGATTTTTATATAGGGAGGAGTTCAGGAAGCAATACAAGAAGGAACATCCTAACAACAAATCCGTCGCCGCCGTAAGTAATTTTAGATCTGTTCATTGCTTTTCTTTTTTGTTTTGTAGTAGATTCTTAACTTTTTAAAAGTTCTCTCGTTTGGTCAAATAAACAGGTTGGAAAGGCTGGTGGTGATAAATGGAAGTCAATGTCCGACGCTGTAAGTTATATTACATGGACTTTGAAGCTATTTTATACCATCTCTTGTGAAAATTGCAACAAATTACTTATTGCTCATATGATTACGTTATTTGCAGGAGAAAGCACCTTACATAAACAAGGCTGAGAAAAGGAAGACTGAGTACAACAAGAGCATGCAGGCTTATAATAAGAGAATTGTACGTTCTCGTATGATATTTTCCTAATTGTATTTCTACACATTATTGTTCTCAAGCGTCTTAATCATGTTTCAAATTCTGTTAGGCGGAGGGAGGTAATGGAGCCGAAGAAGAAGAATCAGATAAATCCAAATCAGAAGTCAATGATGACGATGAAGATGATGATGAGAGTGGAGAGGTTCGTTAACATTTTATGCCTGAATTTTTTTCCATTTTAGATAAAAAACGAAGCAATGATTGCCTGACAATAGTTTATTCTGAATTGCAGGACGAAGATGATGAGTAAATGTTTAGGAGACGAGGAATGATGTGGTGGAAGAAGAACAAGCGTTTTTAACTCCTTCATAGTTCGGAGCAAAGACTCAGCAATTTAGATTTTTCTTTATTATGTCTTGGATAAATAGCTACTTCTTTTTTCCTTTTTTTTTTTTTGGTAATTAGGATAGAATGGGAGAAAAGAAATCAAAACAAAAAGGAAGGTTCGTGTTTGATGTTAGATTTCTTAAGTTGACATGGATATGTATTCAAGGAAAAATCTGTGTTAGTAATTGCACAATGATTCAGTTTTAGTTCCATTATTCTACTGATCTTGATCTTCATCAACTCTCTTTTCTATTTCTATTCACCAATGAAATGAATGAGTGAGCTTAATATACAACGGAATAGGTTGGTTAGTTGTCATTTTCTTGCTGACAGGATTGGAGTTGGAAAGTTTGTTTGATTCTTCTGCCTTGTTCTAAGCTTTTTCAATTGGTGATTGAAATGATAGTGTTGGTTGACTTTACCTCGTCTTCTTTTTTTCCCATTGACTGTGTTGTTTTTAACTATTGCATCATCATCATCAGCCCCTCTTTTGATTTCTCTCACCAAAATTTAAAAATGACCTATTTTGGATTGTGGTGAGATGGGGAGAAGTCAAACTTAAGGTTCCATCTGGTCTGGTAGTCCTTTGTGTTATCTATCAGTTGTTTTGCACAGATGCTGTTTTGGCATTTTGGATGGAATGATATGTAAAAAAATGATTTCTGACAGTTGCCTTTACAATTCTAGCCGTTATGTAAAAATTATATGTATATCAACACTTTATTATTCTATGTTTTTGCTCATTTCTCTGTAATCATAATCTG GTTCCGCACTAAGGAAGGGACGAGTTGTAGGAAGGGAGGGGTAAACTGGTGATTTCGCATTCAAACAACGGGCTTTAACTCACGTGTCCGGATCTGTTGAGAGGGAACAATTCACAGCGAGGAAATTGCAAATAACACACAAAGGAAACACAAAAGAGCGGAAAGCAAATGTGAAGAGACGAAGAGTAGCCAATGAGAAAAAAGGACGAGGATCGATGACATGGCAAAAGATTTTTGAAATCCCGCCTAAACCCGGAGTTTCAATTGATATCGCGATTTATCTCTCCCTCTCTTTAACGAAACCGACTCCCTTCATATCCCTCTCTCTCGCTCCCTCTTCACTTCAAAGGGCTTTTCCTTCTTTCCACATAAACACACGCACTCGAAGCCAATCTCAAAACCGCATCACACGAACCAAACTAAGCCTAACCCAATTTTTTCTCCTCATATTTCACTCTCACACTCTTTCCTTATCTTCTTCTTCCCCCAAACCCTAGAGTTTTACAGGATTCATCATGAAGGGCGGTAAATCCAAGGGGGCGCCTAAAAAGACCGATACCAAGTTGAAGAGCAAAAGTGCCGGAGCTAGTAAGAAATCAGCGAAGGCTGCAAAGGATCCTAACAAGCCGAAGAGGCCTGCTAGTGCTTTCTTCGTTTTCATGGAGGAGTTCAGGAAGCAATACAAGAAGGAACATCCTAACAACAAATCCGTCGCCGCCGTTGGAAAGGCTGGTGGTGATAAATGGAAGTCAATGTCCGACGCTGAGAAAGCACCTTACATAAACAAGGCTGAGAAAAGGAAGACTGAGTACAACAAGAGCATGCAGGCTTATAATAAGAGAATTGCGGAGGGAGGTAATGGAGCCGAAGAAGAAGAATCAGATAAATCCAAATCAGAAGTCAATGATGACGATGAAGATGATGATGAGAGTGGAGAGGACGAAGATGATGAGTAAATGTTTAGGAGACGAGGAATGATGTGGTGGAAGAAGAACAAGCGTTTTTAACTCCTTCATAGTTCGGAGCAAAGACTCAGCAATTTAGATTTTTCTTTATTATGTCTTGGATAAATAGCTACTTCTTTTTTCCTTTTTTTTTTTTTGGTAATTAGGATAGAATGGGAGAAAAGAAATCAAAACAAAAAGGAAGGTTCGTGTTTGATGTTAGATTTCTTAAGTTGACATGGATATGTATTCAAGGAAAAATCTGTGTTAGTAATTGCACAATGATTCAGTTTTAGTTCCATTATTCTACTGATCTTGATCTTCATCAACTCTCTTTTCTATTTCTATTCACCAATGAAATGAATGAGTGAGCTTAATATACAACGGAATAGGTTGGTTAGTTGTCATTTTCTTGCTGACAGGATTGGAGTTGGAAAGTTTGTTTGATTCTTCTGCCTTGTTCTAAGCTTTTTCAATTGGTGATTGAAATGATAGTGTTGGTTGACTTTACCTCGTCTTCTTTTTTTCCCATTGACTGTGTTGTTTTTAACTATTGCATCATCATCATCAGCCCCTCTTTTGATTTCTCTCACCAAAATTTAAAAATGACCTATTTTGGATTGTGGTGAGATGGGGAGAAGTCAAACTTAAGGTTCCATCTGGTCTGGTAGTCCTTTGTGTTATCTATCAGTTGTTTTGCACAGATGCTGTTTTGGCATTTTGGATGGAATGATATGTAAAAAAATGATTTCTGACAGTTGCCTTTACAATTCTAGCCGTTATGTAAAAATTATATGTATATCAACACTTTATTATTCTATGTTTTTGCTCATTTCTCTGTAATCATAATCTG ATGAAGGGCGGTAAATCCAAGGGGGCGCCTAAAAAGACCGATACCAAGTTGAAGAGCAAAAGTGCCGGAGCTAGTAAGAAATCAGCGAAGGCTGCAAAGGATCCTAACAAGCCGAAGAGGCCTGCTAGTGCTTTCTTCGTTTTCATGGAGGAGTTCAGGAAGCAATACAAGAAGGAACATCCTAACAACAAATCCGTCGCCGCCGTTGGAAAGGCTGGTGGTGATAAATGGAAGTCAATGTCCGACGCTGAGAAAGCACCTTACATAAACAAGGCTGAGAAAAGGAAGACTGAGTACAACAAGAGCATGCAGGCTTATAATAAGAGAATTGCGGAGGGAGGTAATGGAGCCGAAGAAGAAGAATCAGATAAATCCAAATCAGAAGTCAATGATGACGATGAAGATGATGATGAGAGTGGAGAGGACGAAGATGATGAGTAA MKGGKSKGAPKKTDTKLKSKSAGASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEGGNGAEEEESDKSKSEVNDDDEDDDESGEDEDDE Homology
BLAST of Pay0018939 vs. ExPASy Swiss-Prot
Match: P40619 (HMG1/2-like protein OS=Ipomoea nil OX=35883 PE=2 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.0e-39 Identity = 102/147 (69.39%), Postives = 119/147 (80.95%), Query Frame = 0
BLAST of Pay0018939 vs. ExPASy Swiss-Prot
Match: P26585 (HMG1/2-like protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 7.8e-39 Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of Pay0018939 vs. ExPASy Swiss-Prot
Match: P93047 (High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34 Identity = 93/146 (63.70%), Postives = 114/146 (78.08%), Query Frame = 0
BLAST of Pay0018939 vs. ExPASy Swiss-Prot
Match: O49596 (High mobility group B protein 2 OS=Arabidopsis thaliana OX=3702 GN=HMGB2 PE=1 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.3e-33 Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 0
BLAST of Pay0018939 vs. ExPASy Swiss-Prot
Match: P40620 (HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 8.4e-33 Identity = 96/153 (62.75%), Postives = 120/153 (78.43%), Query Frame = 0
BLAST of Pay0018939 vs. ExPASy TrEMBL
Match: Q4ZH67 (High mobility group protein OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Pay0018939 vs. ExPASy TrEMBL
Match: A0A1S3BJR7 (HMG1/2-like protein OS=Cucumis melo OX=3656 GN=LOC103490649 PE=3 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Pay0018939 vs. ExPASy TrEMBL
Match: A0A6J1CVX4 (HMG1/2-like protein OS=Momordica charantia OX=3673 GN=LOC111014885 PE=3 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60 Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Pay0018939 vs. ExPASy TrEMBL
Match: A0A6J1KZ83 (HMG1/2-like protein OS=Cucurbita maxima OX=3661 GN=LOC111500202 PE=3 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.1e-59 Identity = 134/146 (91.78%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Pay0018939 vs. ExPASy TrEMBL
Match: A0A6J1E6E0 (HMG1/2-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431129 PE=3 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.1e-59 Identity = 134/146 (91.78%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Pay0018939 vs. NCBI nr
Match: NP_001267705.1 (HMG1/2-like protein-like [Cucumis sativus] >XP_008448477.1 PREDICTED: HMG1/2-like protein [Cucumis melo] >AAY26151.1 high mobility group protein [Cucumis sativus] >KAE8649989.1 hypothetical protein Csa_010903 [Cucumis sativus]) HSP 1 Score: 255.8 bits (652), Expect = 2.3e-64 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Pay0018939 vs. NCBI nr
Match: XP_038904814.1 (HMG1/2-like protein [Benincasa hispida]) HSP 1 Score: 250.8 bits (639), Expect = 7.5e-63 Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Pay0018939 vs. NCBI nr
Match: XP_022145438.1 (HMG1/2-like protein [Momordica charantia]) HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60 Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Pay0018939 vs. NCBI nr
Match: KAG6577813.1 (hypothetical protein SDJN03_25387, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 237.3 bits (604), Expect = 8.5e-59 Identity = 134/146 (91.78%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Pay0018939 vs. NCBI nr
Match: XP_022923434.1 (HMG1/2-like protein [Cucurbita moschata] >XP_022923435.1 HMG1/2-like protein [Cucurbita moschata] >XP_023007627.1 HMG1/2-like protein [Cucurbita maxima] >XP_023007628.1 HMG1/2-like protein [Cucurbita maxima] >XP_023552251.1 HMG1/2-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 237.3 bits (604), Expect = 8.5e-59 Identity = 134/146 (91.78%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Pay0018939 vs. TAIR 10
Match: AT1G20696.1 (high mobility group B3 ) HSP 1 Score: 147.1 bits (370), Expect = 1.1e-35 Identity = 93/146 (63.70%), Postives = 114/146 (78.08%), Query Frame = 0
BLAST of Pay0018939 vs. TAIR 10
Match: AT1G20696.3 (high mobility group B3 ) HSP 1 Score: 145.2 bits (365), Expect = 4.1e-35 Identity = 90/141 (63.83%), Postives = 109/141 (77.30%), Query Frame = 0
BLAST of Pay0018939 vs. TAIR 10
Match: AT1G20693.1 (high mobility group B2 ) HSP 1 Score: 144.1 bits (362), Expect = 9.2e-35 Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 0
BLAST of Pay0018939 vs. TAIR 10
Match: AT1G20693.2 (high mobility group B2 ) HSP 1 Score: 144.1 bits (362), Expect = 9.2e-35 Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 0
BLAST of Pay0018939 vs. TAIR 10
Match: AT1G20693.3 (high mobility group B2 ) HSP 1 Score: 143.3 bits (360), Expect = 1.6e-34 Identity = 89/145 (61.38%), Postives = 112/145 (77.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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