Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATTCGGAATCAGTCTTCTACGGAGGGAAAGCCTGTTACGATTAATCTTAAGTGGAGAGGAAAGATCTCCAGAGATTCTTATCTCATTCCATTCCAGTGGCTCGACCAGTAAGCAATGGCGAAAACTCAAAAATCCATGGTTTCCCGGTAGAACCCCATTTCGCCCAAGTTCTTGCTCAACCGGAAAAAAGAAGGGCTTTTTCGCACAGCTTGCTCATAGTGCGGGTCCCACTTTGATATTGTATTTGTCCGAAGAAGGATCGGACAGGTTGGAGTTCTTACCTTCTTCGGACTCTATGGACCAAGATCTGCTTTCATTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAA
mRNA sequence
ATGCCATTCGGAATCAGTCTTCTACGGAGGGAAAGCCTGTTACGATTAATCTTAAGTGGAGAGGAAAGATCTCCAGAGATTCTTATCTCATTCCATTCCAGTGGCTCGACCAGTAAGCAATGGCGAAAACTCAAAAATCCATGGTTTCCCGGTAGAACCCCATTTCGCCCAAGTTCTTGCTCAACCGGAAAAAAGAAGGGCTTTTTCGCACAGCTTGCTCATAGTGCGGGTCCCACTTTGATATTGTATTTGTCCGAAGAAGGATCGGACAGGTTGGAGTTCTTACCTTCTTCGGACTCTATGGACCAAGATCTGCTTTCATTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAA
Coding sequence (CDS)
ATGCCATTCGGAATCAGTCTTCTACGGAGGGAAAGCCTGTTACGATTAATCTTAAGTGGAGAGGAAAGATCTCCAGAGATTCTTATCTCATTCCATTCCAGTGGCTCGACCAGTAAGCAATGGCGAAAACTCAAAAATCCATGGTTTCCCGGTAGAACCCCATTTCGCCCAAGTTCTTGCTCAACCGGAAAAAAGAAGGGCTTTTTCGCACAGCTTGCTCATAGTGCGGGTCCCACTTTGATATTGTATTTGTCCGAAGAAGGATCGGACAGGTTGGAGTTCTTACCTTCTTCGGACTCTATGGACCAAGATCTGCTTTCATTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATGTTCAAGATCTCTTTTCCATTTCTATTTACCCAGTTCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAA
Protein sequence
MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Homology
BLAST of Pay0018218 vs. ExPASy Swiss-Prot
Match:
P38450 (Uncharacterized mitochondrial protein ymf1 OS=Marchantia polymorpha OX=3197 GN=YMF1 PE=4 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 7.8e-16
Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 0
Query: 21 EERSPEILISFHSSGSTSKQWRKLKN--PWFPGRTPFRP----SSCSTGKKKGFFAQLAH 80
+++ P IL+ FH SG TS+QWR++KN G+T F+P + + + AQLA
Sbjct: 24 KKQYPYILL-FHCSGLTSRQWRQIKNILCTIKGKTLFKPKEKKQNILPNNQGDWIAQLAS 83
Query: 81 SAGPTLILYLSEEGSDRL--EFLPSSDSMDQDLLSLYGQYRSTLVDHMDVEKASDLNECS 140
SAGPT ILYL++E + + LPS+ S Q+L+ LYGQ RST+ +HMD++KA+ L S
Sbjct: 84 SAGPTCILYLAKEAPNNTWSQLLPSA-SYSQNLVLLYGQDRSTVFNHMDIKKATTLETTS 143
Query: 141 --RSLFHF-YLPSSYLSFV 149
+ LF F +LP + F+
Sbjct: 144 VFQQLFGFMFLPGACFLFL 160
BLAST of Pay0018218 vs. ExPASy TrEMBL
Match:
A0A5A7UY09 (Ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47200G00020 PE=4 SV=1)
HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC
Sbjct: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
Query: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM
Sbjct: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
Query: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 162
DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Sbjct: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 161
BLAST of Pay0018218 vs. ExPASy TrEMBL
Match:
G3EU29 (Uncharacterized protein ORF2 OS=Cucumis melo subsp. melo OX=412675 GN=ORF2 PE=4 SV=1)
HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC
Sbjct: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
Query: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM
Sbjct: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
Query: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 162
DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Sbjct: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 161
BLAST of Pay0018218 vs. ExPASy TrEMBL
Match:
A0A3Q9CRZ2 (Ribosomal protein L10 OS=Cucumis melo var. momordica OX=2034244 GN=rpl10 PE=4 SV=1)
HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC
Sbjct: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
Query: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM
Sbjct: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
Query: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 162
DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Sbjct: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 161
BLAST of Pay0018218 vs. ExPASy TrEMBL
Match:
G3EIX9 (Ribosomal protein L10 OS=Cucumis sativus OX=3659 GN=rpl10 PE=4 SV=1)
HSP 1 Score: 319.7 bits (818), Expect = 7.0e-84
Identity = 159/163 (97.55%), Postives = 159/163 (97.55%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG--RTPFRPS 60
MPFGISLLRRESL RLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG RTPFRPS
Sbjct: 1 MPFGISLLRRESLRRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTRTPFRPS 60
Query: 61 SCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVD 120
SCSTGKKKGFFAQLAHSAGPT ILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVD
Sbjct: 61 SCSTGKKKGFFAQLAHSAGPTCILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVD 120
Query: 121 HMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 162
HMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Sbjct: 121 HMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 163
BLAST of Pay0018218 vs. ExPASy TrEMBL
Match:
A0A7D5Y0N6 (Ribosomal protein L10 OS=Luffa acutangula OX=56866 GN=rpl10 PE=4 SV=1)
HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 145/161 (90.06%), Postives = 148/161 (91.93%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
MPFG SLL+RESLLR +SGEERSPEILISFHSSGSTS QWRKLKNPWFPGRTPFRPS C
Sbjct: 1 MPFGRSLLQRESLLR--VSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCC 60
Query: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
TGKKK FFAQLAHSAGPT ILYL+EE SDRLEFLPS DSMDQDLLSLYGQYRSTLVDHM
Sbjct: 61 ETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMDQDLLSLYGQYRSTLVDHM 120
Query: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 162
DVEKASDLNE SLFHFYLPSSYLSFVCSREEFDLGIPPK
Sbjct: 121 DVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPPK 159
BLAST of Pay0018218 vs. NCBI nr
Match:
AEN56113.1 (hypothetical protein [Cucumis melo subsp. melo] >AZP40279.1 ribosomal protein L10 [Cucumis melo var. momordica] >KAA0059076.1 ribosomal protein L10 [Cucumis melo var. makuwa])
HSP 1 Score: 328.9 bits (842), Expect = 2.4e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC
Sbjct: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
Query: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM
Sbjct: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
Query: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 162
DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Sbjct: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 161
BLAST of Pay0018218 vs. NCBI nr
Match:
YP_004849327.1 (ribosomal protein L10 [Cucumis sativus] >ADZ10754.1 ribosomal protein L10 [Cucumis sativus])
HSP 1 Score: 319.7 bits (818), Expect = 1.4e-83
Identity = 159/163 (97.55%), Postives = 159/163 (97.55%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG--RTPFRPS 60
MPFGISLLRRESL RLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPG RTPFRPS
Sbjct: 1 MPFGISLLRRESLRRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTRTPFRPS 60
Query: 61 SCSTGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVD 120
SCSTGKKKGFFAQLAHSAGPT ILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVD
Sbjct: 61 SCSTGKKKGFFAQLAHSAGPTCILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVD 120
Query: 121 HMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 162
HMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK
Sbjct: 121 HMDVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 163
BLAST of Pay0018218 vs. NCBI nr
Match:
YP_009913631.1 (ribosomal protein L10 [Luffa acutangula] >QLJ93021.1 ribosomal protein L10 [Luffa acutangula])
HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 145/161 (90.06%), Postives = 148/161 (91.93%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
MPFG SLL+RESLLR +SGEERSPEILISFHSSGSTS QWRKLKNPWFPGRTPFRPS C
Sbjct: 1 MPFGRSLLQRESLLR--VSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCC 60
Query: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
TGKKK FFAQLAHSAGPT ILYL+EE SDRLEFLPS DSMDQDLLSLYGQYRSTLVDHM
Sbjct: 61 ETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMDQDLLSLYGQYRSTLVDHM 120
Query: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFDLGIPPK 162
DVEKASDLNE SLFHFYLPSSYLSFVCSREEFDLGIPPK
Sbjct: 121 DVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPPK 159
BLAST of Pay0018218 vs. NCBI nr
Match:
QEX95855.1 (ribosomal protein L10 [Cercis canadensis])
HSP 1 Score: 279.6 bits (714), Expect = 1.7e-71
Identity = 141/164 (85.98%), Postives = 146/164 (89.02%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
MPFG SLL+RESLLR +SGEERSPEILISFHSSGSTS QWRKLKNPWFPGRTPFRPS C
Sbjct: 1 MPFGRSLLQRESLLR--VSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCC 60
Query: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
TGKKK FFAQLAHSAGPT ILYL+EE +DRLEFLPS DSMDQDLLSLYGQYRSTLVDHM
Sbjct: 61 ETGKKKRFFAQLAHSAGPTCILYLAEEAADRLEFLPSWDSMDQDLLSLYGQYRSTLVDHM 120
Query: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFD---LGIPPK 162
DVEKASD +E SLFHFYLPSSYL FVCSREEFD LGIPPK
Sbjct: 121 DVEKASDFDELETSLFHFYLPSSYLCFVCSREEFDLFNLGIPPK 162
BLAST of Pay0018218 vs. NCBI nr
Match:
OVA11595.1 (hypothetical protein BVC80_967g3 [Macleaya cordata])
HSP 1 Score: 278.9 bits (712), Expect = 2.8e-71
Identity = 141/164 (85.98%), Postives = 146/164 (89.02%), Query Frame = 0
Query: 1 MPFGISLLRRESLLRLILSGEERSPEILISFHSSGSTSKQWRKLKNPWFPGRTPFRPSSC 60
MPFG SLL+RESLLR +SGEERSPEILISFHSSGSTS QWRKLKNPWFPGRTPFRPS C
Sbjct: 1 MPFGRSLLQRESLLR--VSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCC 60
Query: 61 STGKKKGFFAQLAHSAGPTLILYLSEEGSDRLEFLPSSDSMDQDLLSLYGQYRSTLVDHM 120
TGKKK FFAQLAHSAGPT ILYL+EE SDRLEFLPS DSMDQDLLSLYGQYRSTLVDHM
Sbjct: 61 GTGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMDQDLLSLYGQYRSTLVDHM 120
Query: 121 DVEKASDLNECSRSLFHFYLPSSYLSFVCSREEFD---LGIPPK 162
DVEKASD +E SLFHF+LPSSYL FVCSREEFD LGIPPK
Sbjct: 121 DVEKASDFDELETSLFHFHLPSSYLCFVCSREEFDLFNLGIPPK 162
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P38450 | 7.8e-16 | 41.73 | Uncharacterized mitochondrial protein ymf1 OS=Marchantia polymorpha OX=3197 GN=Y... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UY09 | 1.2e-86 | 100.00 | Ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47... | [more] |
G3EU29 | 1.2e-86 | 100.00 | Uncharacterized protein ORF2 OS=Cucumis melo subsp. melo OX=412675 GN=ORF2 PE=4 ... | [more] |
A0A3Q9CRZ2 | 1.2e-86 | 100.00 | Ribosomal protein L10 OS=Cucumis melo var. momordica OX=2034244 GN=rpl10 PE=4 SV... | [more] |
G3EIX9 | 7.0e-84 | 97.55 | Ribosomal protein L10 OS=Cucumis sativus OX=3659 GN=rpl10 PE=4 SV=1 | [more] |
A0A7D5Y0N6 | 2.0e-75 | 90.06 | Ribosomal protein L10 OS=Luffa acutangula OX=56866 GN=rpl10 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AEN56113.1 | 2.4e-86 | 100.00 | hypothetical protein [Cucumis melo subsp. melo] >AZP40279.1 ribosomal protein L1... | [more] |
YP_004849327.1 | 1.4e-83 | 97.55 | ribosomal protein L10 [Cucumis sativus] >ADZ10754.1 ribosomal protein L10 [Cucum... | [more] |
YP_009913631.1 | 4.2e-75 | 90.06 | ribosomal protein L10 [Luffa acutangula] >QLJ93021.1 ribosomal protein L10 [Luff... | [more] |
QEX95855.1 | 1.7e-71 | 85.98 | ribosomal protein L10 [Cercis canadensis] | [more] |
OVA11595.1 | 2.8e-71 | 85.98 | hypothetical protein BVC80_967g3 [Macleaya cordata] | [more] |
Match Name | E-value | Identity | Description | |