Pay0016963 (gene) Melon (Payzawat) v1

Overview
NamePay0016963
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr11: 26869252 .. 26873282 (-)
RNA-Seq ExpressionPay0016963
SyntenyPay0016963
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTACACGATTTGAAGTGTCAAGTTTAATGGACATGGAGATTTTGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGAAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAGATATATATAAAGGAGAAGTTTTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACTAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATCGCGTCAGGTAAAATTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATATTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCTTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGATACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAAAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTTTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATCCATATTGTAATGCTGTTGGGAGCATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCTGTTAAATGGGTGTTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGATCTTGATAAAAGAAGGTCCTTATCGGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACTTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

mRNA sequence

ATGGCTTCTACACGATTTGAAGTGTCAAGTTTAATGGACATGGAGATTTTGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAAAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAGATATATATAAAGGAGAAGTTTTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGAAAATCTAGAAAGTAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACTAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATCGCGTCAGGTAAAATTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATATTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCTTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGATACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAAAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTTTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATCATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCTGTTAAATGGGTGTTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGATCTTGATAAAAGAAGGTCCTTATCGGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACTTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Coding sequence (CDS)

ATGGCTTCTACACGATTTGAAGTGTCAAGTTTAATGGACATGGAGATTTTGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAAAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAGATATATATAAAGGAGAAGTTTTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGAAAATCTAGAAAGTAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACTAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATCGCGTCAGGTAAAATTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATATTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCTTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGATACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAAAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTTTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATCATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCTGTTAAATGGGTGTTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGATCTTGATAAAAGAAGGTCCTTATCGGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACTTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Protein sequence

MASTRFEVSSLMDMEILLFGEKRLELFWFNIKNITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKENLESKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEIIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Homology
[Close]
BLAST of Pay0016963 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 9.1e-272
Identity = 532/1292 (41.18%), Postives = 771/1292 (59.67%), Query Frame = 0 

Query: 41   DMDEMAYSTILLYLSDEVL-RLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKM 100
            D+DE A S I L+LSD+V+  ++DE T  G +W +LESLY++K+L NK+Y+K++ +   M
Sbjct: 54   DLDERAASAIRLHLSDDVVNNIIDEDTARG-IWTRLESLYMSKTLTNKLYLKKQLYALHM 113

Query: 101  DQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTM 160
             +  +   +L+ F  ++  L N+G K+ +E++A++LLNSLP +Y  +   I +G+ ++ +
Sbjct: 114  SEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIEL 173

Query: 161  SIVLDALKTRNLEIKKERKDGELLM--ARGRSEKKSWKGKERS-FRSKSKENLES----- 220
              V  AL       KK    G+ L+   RGRS ++S     RS  R KSK   +S     
Sbjct: 174  KDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNC 233

Query: 221  ----------KNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRD 280
                      ++CP  +  +  TS     D  N+A +    D+        E  M     
Sbjct: 234  YNCNQPGHFKRDCPNPRKGKGETSGQKNDD--NTAAMVQNNDNVVLFINEEEECM-HLSG 293

Query: 281  IQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRI 340
             +  W++D+  + H TP RD    +   D G V +G+     + G G + I T+ G   +
Sbjct: 294  PESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLV 353

Query: 341  LTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTV 400
            L +VR+VP L+ NLIS   LDR G      N   ++TKGSLV  +G  R  LY       
Sbjct: 354  LKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEIC 413

Query: 401  SGSAAIASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTR 460
             G    A  +I+    LWHKR+ H+SE+GLQ L+++ L+   K   +  C++C+ GK  R
Sbjct: 414  QGELNAAQDEIS--VDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHR 473

Query: 461  VKFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFG 520
            V F         ILD ++SD+ GP +  SMGG++YF++ IDD SRK+W+Y LK KD+ F 
Sbjct: 474  VSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQ 533

Query: 521  KFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAER 580
             F ++   VE +TGRK+K LR+DNG E+ + +F ++C S GI    TV  TPQ NG+AER
Sbjct: 534  VFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAER 593

Query: 581  FNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEH 640
             NRTI+E+ R +L  A LP  FWGEA QTACYLINRSPS  L  + P+ VWT K  S  H
Sbjct: 594  MNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSH 653

Query: 641  LRVFGCTAYAHV---KDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFN 700
            L+VFGC A+AHV   +  KL+ +++ C+FIGY     GY+LW  +    K I SRDV F 
Sbjct: 654  LKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLW--DPVKKKVIRSRDVVFR 713

Query: 701  ETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQ 760
            E+E+       +K + G  +   V I S        ++    VSE     Q E  G   +
Sbjct: 714  ESEVRTAADMSEKVKNG-IIPNFVTIPSTSNNPTSAESTTDEVSE-----QGEQPGEVIE 773

Query: 761  QERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEA 820
            Q   L DEG    E  +  + Q+  L R   +R R    RY   + V         S + 
Sbjct: 774  QGEQL-DEGVEEVEHPTQGEEQHQPLRRS--ERPRVESRRYPSTEYVLI-------SDDR 833

Query: 821  EPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGG 880
            EP + +E +    K Q   AM+EE+ SL KN T+ LV  P  ++ ++ KW++K+K   G 
Sbjct: 834  EPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKK-DGD 893

Query: 881  NSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFL 940
                RYKARLV KG+ QK+G+DF EIFSPVV+ +SIR ILS+A   D+ +EQ+DV TAFL
Sbjct: 894  CKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFL 953

Query: 941  HGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSY 1000
            HG+LEE IYM QP+G+EV GK+ MVC+L+KSLYGLKQ+PRQWY++FD+F+  Q + +   
Sbjct: 954  HGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYS 1013

Query: 1001 DACVYWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMD 1060
            D CVY+K+  +  +I LLLYVDDM++V KD   I +LK  LS  F+MKDLG  ++ILGM 
Sbjct: 1014 DPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMK 1073

Query: 1061 VKRDKEKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQER----- 1120
            + R++    L +SQE Y+ ++LE++NM  +K VSTPLA H +LS   CP T +E+     
Sbjct: 1074 IVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAK 1133

Query: 1121 ------IEIIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCY 1180
                  +  +MY M+CTRPD+ +A+ ++SRF+ NPGKEHW+AVKW+LRYL+G+    LC+
Sbjct: 1134 VPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF 1193

Query: 1181 SRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYI 1240
                    +L+G+TDAD A D+D R+S +G++F   G  +SW+  LQ  VALSTTE+EYI
Sbjct: 1194 G---GSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYI 1253

Query: 1241 SLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRN 1300
            +  E  KE +WLKR + EL   +   +++CDSQSAI L+KN  +H R+KHIDV++H+IR 
Sbjct: 1254 AATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIRE 1313

[Close]
BLAST of Pay0016963 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 600.9 bits (1548), Expect = 3.5e-170
Identity = 417/1385 (30.11%), Postives = 700/1385 (50.54%), Query Frame = 0 

Query: 33   NITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKE 92
            N  +   +  +  A STI+ YLSD  L       T  ++ + L+++Y  KSL +++ +++
Sbjct: 42   NEVDDSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRK 101

Query: 93   KFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIK- 152
            +    K+    SL  +   F +++ +L   G K+ + ++   LL +LP  Y  +  AI+ 
Sbjct: 102  RLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIET 161

Query: 153  YGRDSLTMSIVLDALKTRNLEIKKERKD--GELLMARGRSEKKSWKGK---------ERS 212
               ++LT++ V + L  + ++IK +  D   +++ A   +   ++K           ++ 
Sbjct: 162  LSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKI 221

Query: 213  FRSKSKENLESKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHR 272
            F+  SK  ++  +C      +             + E      +A +   +  V  V++ 
Sbjct: 222  FKGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNT 281

Query: 273  DIQD--AWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGM 332
             + D   +++DSG + H+       T+  +V     +        V   G    AT  G+
Sbjct: 282  SVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIA-------VAKQGEFIYATKRGI 341

Query: 333  VRI-------LTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSL--VKLRGTL 392
            VR+       L +V +  +   NL+S+  L  +G +I+ +   + ++K  L  VK  G L
Sbjct: 342  VRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGML 401

Query: 393  RHGLYVLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGG---VKNV 452
             +         ++  A   + K  +   LWH+R  H+S+  L  + ++ +      + N+
Sbjct: 402  NN------VPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNL 461

Query: 453  EL--PFCEHCIMGKSTRVKFGKGKHTT--KGILDYIHSDLWGPTKEVSMGGSRYFISIID 512
            EL    CE C+ GK  R+ F + K  T  K  L  +HSD+ GP   V++    YF+  +D
Sbjct: 462  ELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVD 521

Query: 513  DFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEG 572
             F+     Y +K K + F  F ++  + E     KV YL  DNG E+++N+  QFC  +G
Sbjct: 522  QFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKG 581

Query: 573  ITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTA 632
            I+ H TV +TPQ NG++ER  RTI E+ R +++ A L   FWGEA  TA YLINR PS A
Sbjct: 582  ISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRA 641

Query: 633  L--NLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKD--GKLNKRALKCMFIGYPQGVKGYK 692
            L  + KTP E+W  K P L+HLRVFG T Y H+K+  GK + ++ K +F+GY     G+K
Sbjct: 642  LVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEP--NGFK 701

Query: 693  LWCIEKGMNKCIISRDVTFNETEM---------PYCVKEQQKQQTGDHVVTEVRIASEVR 752
            LW  +    K I++RDV  +ET M            +K+ ++ +  +      +I     
Sbjct: 702  LW--DAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEF 761

Query: 753  P--SIDLDNQPPLVSEIEDTQQSEFDGIQSQQERIL----------IDEGAFIEESSSNN 812
            P  S + DN    +  ++D+++SE     +   +I+           D   F+++S  +N
Sbjct: 762  PNESKECDN----IQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESN 821

Query: 813  DL----------------------------------------------QNYQLTRDRVQR 872
                                                               ++   R +R
Sbjct: 822  KYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSER 881

Query: 873  ERHAP-IRYGYADLVAYALTCAADSIEAE-PLTFEEAIVSDSKKQWKDAMEEELFSLHKN 932
             +  P I Y   D     +   A +I  + P +F+E    D K  W++A+  EL +   N
Sbjct: 882  LKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKIN 941

Query: 933  QTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVV 992
             TW++  +P N+ ++ S+W++ +K    GN   RYKARLVA+G+TQK  +D+ E F+PV 
Sbjct: 942  NTWTITKRPENKNIVDSRWVFSVKYNELGN-PIRYKARLVARGFTQKYQIDYEETFAPVA 1001

Query: 993  RHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKS 1052
            R SS R ILS+ + +++ + QMDV TAFL+G L+E IYM  P+G  +    D VC+L+K+
Sbjct: 1002 RISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKA 1061

Query: 1053 LYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY-WKQSQKGTYIYLLLYVDDMILVSKD 1112
            +YGLKQ+ R W+  F+  + +  F  +S D C+Y   +      IY+LLYVDD+++ + D
Sbjct: 1062 IYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGD 1121

Query: 1113 YAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSGS 1172
               +   K+ L  +F M DL E+K  +G+ ++  ++K  + +SQ +YV K+L K+NM   
Sbjct: 1122 MTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDK--IYLSQSAYVKKILSKFNMENC 1181

Query: 1173 KAVSTPLASHFRL----SSSQCPVTKQERIEIIMYLMICTRPDLGYAMSMISRFMSNPGK 1232
             AVSTPL S        S   C    +  I  +MY+M+CTRPDL  A++++SR+ S    
Sbjct: 1182 NAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNS 1241

Query: 1233 EHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYG 1292
            E W+ +K VLRYLKG+  + L + ++      + G+ D+D+A     R+S +G++F+++ 
Sbjct: 1242 ELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFD 1301

Query: 1293 -NVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPI-IHCDSQSA 1308
             N++ W    Q  VA S+TE+EY++L EAV+EA+WLK ++  +  +   PI I+ D+Q  
Sbjct: 1302 FNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGC 1361

[Close]
BLAST of Pay0016963 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 2.4e-139
Identity = 413/1403 (29.44%), Postives = 649/1403 (46.26%), Query Frame = 0 

Query: 40   RDMDEMAYSTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIK-------E 99
            R  D++ YS IL  +S  V   V  ATT  ++W+ L  +Y   S  +   ++        
Sbjct: 78   RRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITRFDQL 137

Query: 100  KFFGYKMDQSKSLE---ENLDEFQKIVVD----------LNNIGEKMSDENQAVILLNSL 159
               G  MD  + +E   ENL +  K V+D          L  I E++ +    ++ LNS 
Sbjct: 138  ALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSA 197

Query: 160  PETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARG-RSEKKSWKGKE 219
                  + A +   R++ T     +    RN      R +     + G RS+ +  K   
Sbjct: 198  EVV--PITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYL 257

Query: 220  RSFRSKSKENLESKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVS 279
               +  S +   +K CP     +++T++   T  +             T ++    L V+
Sbjct: 258  GRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPF-------------TPWQPRANLAVN 317

Query: 280  HRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDG 339
                 + W++DSG T H+T   + L+  Q   GG  V++ D  T  +  TGS  + T   
Sbjct: 318  SPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSR 377

Query: 340  MVRILTNVRYVPKLKRNLISLGEL---DRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLY 399
             +  L  V YVP + +NLIS+  L   +R        +  +K     +  L+G  +  LY
Sbjct: 378  SLD-LNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELY 437

Query: 400  ---VLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQA-LSQQGLLGGVKNVELPF 459
               +     VS  A+  S K T  S  WH RL H S   L + +S   L     + +L  
Sbjct: 438  EWPIASSQAVSMFASPCS-KATHSS--WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS 497

Query: 460  CEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWI 519
            C  C + KS +V F     T+   L+YI+SD+W  +  +S+   RY++  +D F+R  W+
Sbjct: 498  CSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWL 557

Query: 520  YPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVT 579
            YPLKQK +    F+ +K  VEN+   ++  L +DNG EFV      +    GI+   +  
Sbjct: 558  YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPP 617

Query: 580  YTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQE 639
            +TP+ NGL+ER +R I+E    LL++AS+P  +W  A   A YLINR P+  L L++P +
Sbjct: 618  HTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQ 677

Query: 640  VWTGKAPSLEHLRVFGCTAYAHVKD---GKLNKRALKCMFIGYPQGVKGYKLWCIEKGMN 699
               G+ P+ E L+VFGC  Y  ++     KL  ++ +C F+GY      Y   C+     
Sbjct: 678  KLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAY--LCLHIPTG 737

Query: 700  KCIISRDVTFNETEMPYC-----VKEQQKQQT-------------------------GDH 759
            +   SR V F+E   P+      V   Q+Q++                         G H
Sbjct: 738  RLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPH 797

Query: 760  VVTEVRIASEVRP----------------SIDLDNQPPLVSEIEDTQQSEFDGIQSQQER 819
            + T  R  S   P                S    ++P   S       ++    Q+    
Sbjct: 798  LDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSN 857

Query: 820  ILIDEGAFIEESSSNNDLQNYQLTRDR--------------------------------- 879
              I         S N+  QN  L +                                   
Sbjct: 858  SPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVL 917

Query: 880  -----VQRERHAPIR-YGYA-----------DLVAYALTCAADSIEAEPLTFEEAIVSDS 939
                 +Q    AP+  +  A              +YA + AA+S   EP T  +A+  D 
Sbjct: 918  PAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANS---EPRTAIQAMKDD- 977

Query: 940  KKQWKDAMEEELFSLHKNQTWSLV-PKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVA 999
              +W+ AM  E+ +   N TW LV P PP+  ++  +WI+  K  + G S  RYKARLVA
Sbjct: 978  --RWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDG-SLNRYKARLVA 1037

Query: 1000 KGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQ 1059
            KGY Q+ G+D+ E FSPV++ +SIR++L +AV     I Q+DV  AFL G L + +YM+Q
Sbjct: 1038 KGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQ 1097

Query: 1060 PKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKG 1119
            P G+  K + D VCRL K++YGLKQ+PR WY+   T++L  GF  +  D  ++  Q  + 
Sbjct: 1098 PPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGR- 1157

Query: 1120 TYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTI 1179
            + IY+L+YVDD+++   D   +      LS  F +K+  +L   LG++ KR  +   L +
Sbjct: 1158 SIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG--LHL 1217

Query: 1180 SQESYVIKLLEKYNMSGSKAVSTPLASHFRL---SSSQCPVTKQER--IEIIMYLMICTR 1239
            SQ  Y + LL + NM  +K V+TP+A+  +L   S ++ P   + R  +  + YL   TR
Sbjct: 1218 SQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAF-TR 1277

Query: 1240 PDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADY 1299
            PDL YA++ +S++M  P  +HW A+K VLRYL G+    +   +    +  L  ++DAD+
Sbjct: 1278 PDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK--GNTLSLHAYSDADW 1337

Query: 1300 AADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGE 1308
            A D D   S +G+I  L  + +SW    Q  V  S+TE+EY S+     E  W+  ++ E
Sbjct: 1338 AGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTE 1397

[Close]
BLAST of Pay0016963 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 1.1e-136
Identity = 392/1398 (28.04%), Postives = 651/1398 (46.57%), Query Frame = 0 

Query: 43   DEMAYSTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQS 102
            D++ YS +L  +S  V   V  ATT  ++W+ L  +Y   S  +   ++ +   +    +
Sbjct: 81   DKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKG-T 140

Query: 103  KSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREV--KAAIKYGRDSLT-- 162
            K++++ +         L  +G+ M  + Q   +L +LPE Y+ V  + A K    +LT  
Sbjct: 141  KTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEI 200

Query: 163  -------------------MSIVLDALKTRNLEIKKERKDG----ELLMARGRSEKKSWK 222
                               + I  +A+  RN        +G            +  K W+
Sbjct: 201  HERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQ 260

Query: 223  GKERSFRSKSKENLE-SKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEV 282
                +F   + ++      C +   +  S    +    + S+  +    S  T ++    
Sbjct: 261  QSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRAN 320

Query: 283  LMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIA 342
            L +      + W++DSG T H+T   + L+  Q   GG  V++ D  T  +  TGS  ++
Sbjct: 321  LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS 380

Query: 343  THDGMVRILTNVRYVPKLKRNLISLGEL-DRSGCTIK--SENGVMKVTKGSLVKLRGTLR 402
            T    +  L N+ YVP + +NLIS+  L + +G +++    +  +K     +  L+G  +
Sbjct: 381  TKSRPLN-LHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTK 440

Query: 403  HGLYVLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPF 462
              LY     +    +  AS         WH RL H +   L ++     L  V N    F
Sbjct: 441  DELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSL-SVLNPSHKF 500

Query: 463  --CEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKV 522
              C  C++ KS +V F +    +   L+YI+SD+W  +  +S    RY++  +D F+R  
Sbjct: 501  LSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYT 560

Query: 523  WIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFT 582
            W+YPLKQK +    F+ +K  +EN+   ++    +DNG EFV     ++    GI+   +
Sbjct: 561  WLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTS 620

Query: 583  VTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTP 642
              +TP+ NGL+ER +R I+E    LL++AS+P  +W  A   A YLINR P+  L L++P
Sbjct: 621  PPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESP 680

Query: 643  QEVWTGKAPSLEHLRVFGCTAYAHVK---DGKLNKRALKCMFIGYPQGVKGYKLWCIEKG 702
             +   G +P+ + LRVFGC  Y  ++     KL+ ++ +C+F+GY      Y   C+   
Sbjct: 681  FQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAY--LCLHLQ 740

Query: 703  MNKCIISRDVTFNETEMPYC--------VKEQQKQQT---GDHVVTEVR----------- 762
             ++  ISR V F+E   P+         V+EQ+++ +     H     R           
Sbjct: 741  TSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSD 800

Query: 763  ----IASEVRPSIDLDNQPPLVSEIEDTQQSEF-----------DGIQSQQERILIDEGA 822
                      PS    N     S ++ +  S F           +G Q   +        
Sbjct: 801  PHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQT 860

Query: 823  FIEESSSNNDLQN---YQLTRDR------------------------------------- 882
               +++S N+  N    QL +                                       
Sbjct: 861  HSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPL 920

Query: 883  ---VQRERHAPIR------YGYADLV----AYALTCAADSIEAEPLTFEEAIVSDSKKQW 942
               V     AP+          A ++     Y+L  +  + E+EP T   AI +   ++W
Sbjct: 921  AQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSL-AAESEPRT---AIQALKDERW 980

Query: 943  KDAMEEELFSLHKNQTWSLVPKPPNQ-KLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYT 1002
            ++AM  E+ +   N TW LVP PP+   ++  +WI+  K  + G S  RYKARLVAKGY 
Sbjct: 981  RNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDG-SLNRYKARLVAKGYN 1040

Query: 1003 QKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGY 1062
            Q+ G+D+ E FSPV++ +SIR++L +AV     I Q+DV  AFL G L + +YM+QP G+
Sbjct: 1041 QRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGF 1100

Query: 1063 EVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIY 1122
              K + + VC+L K+LYGLKQ+PR WY+    ++L  GF  +  D  ++  Q  K + +Y
Sbjct: 1101 IDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGK-SIVY 1160

Query: 1123 LLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQES 1182
            +L+YVDD+++   D   +      LS  F +KD  EL   LG++ KR      L +SQ  
Sbjct: 1161 MLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG--LHLSQRR 1220

Query: 1183 YVIKLLEKYNMSGSKAVSTPLASHFRLS----SSQCPVTKQERIEIIMYLMICTRPDLGY 1242
            Y++ LL + NM  +K V+TP+A   +LS    +     T+   I   +  +  TRPD+ Y
Sbjct: 1221 YILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISY 1280

Query: 1243 AMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLD 1302
            A++ +S+FM  P +EH +A+K +LRYL G+ +  +   +    +  L  ++DAD+A D D
Sbjct: 1281 AVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK--GNTLSLHAYSDADWAGDKD 1340

Query: 1303 KRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL-LSQ 1308
               S +G+I  L  + +SW    Q  V  S+TE+EY S+     E  W+  ++ EL +  
Sbjct: 1341 DYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRL 1400

[Close]
BLAST of Pay0016963 vs. ExPASy Swiss-Prot
Match: P0C2J7 (Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY4B-H PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-38
Identity = 154/637 (24.18%), Postives = 295/637 (46.31%), Query Frame = 0 

Query: 704  IASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQ 763
            ++  +  +I+    P            EF  +  +++R         +    NN L +Y+
Sbjct: 1189 VSPRLEQNIEASGSPVQTVNKSAFLNKEFSSLNMKRKR---------KRHDKNNSLTSYE 1248

Query: 764  LTRDRVQRERHAPIRYGYADLVAYAL-TCAADSIEAEPLTFEEAIVSD----SKKQWKDA 823
            L RD+ + +R+         L+   + T +A  I A  + + EAI  +     K ++K A
Sbjct: 1249 LERDKKRSKRNR------VKLIPDNMETVSAQKIRA--IYYNEAISKNPDLKEKHEYKQA 1308

Query: 824  MEEELFSLHKNQTWSLVPK-----PPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGY 883
              +EL +L   + + +  K      P+  ++ +  I+  K          YKAR+V +G 
Sbjct: 1309 YHKELQNLKDMKVFDVDVKYSRSEIPDNLIVPTNTIFTKK------RNGIYKARIVCRGD 1368

Query: 884  TQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKG 943
            TQ     +  I +  + H+ I++ L IA + +MF++ +D+  AFL+ +LEE IY+  P  
Sbjct: 1369 TQSPDT-YSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLEEEIYIPHPH- 1428

Query: 944  YEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYI 1003
                     V +L+K+LYGLKQSP++W      ++   G   NSY   +Y  + +    +
Sbjct: 1429 -----DRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGLYQTEDKN---L 1488

Query: 1004 YLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGEL------KRILGMDVKRDKEKGL 1063
             + +YVDD ++ + +   + E   +L + FE+K  G L        ILGMD+  +K  G 
Sbjct: 1489 MIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDLVYNKRLGT 1548

Query: 1064 LTISQESYVIKLLEKYN--MSGSKAVSTPLASHFRLSSS------------QCPVTKQER 1123
            + ++ +S++ ++ +KYN  +   +  S P  S +++               Q  +  Q+ 
Sbjct: 1549 IDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFRQGVLKLQQL 1608

Query: 1124 IEIIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDK 1183
            +  + Y+    R D+ +A+  ++R ++ P +  +  +  +++YL     + + Y RDC+K
Sbjct: 1609 LGELNYVRHKCRYDINFAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNK 1668

Query: 1184 STLLEGFTDADYAADLDKRRSLSGHIFRLYG-NVVSWKVNLQPVVALSTTESEYISLGEA 1243
               +   TDA   ++ D +  +   +   YG N+ +   N      +S+TE+E  ++ E 
Sbjct: 1669 DKKVIAITDASVGSEYDAQSRIG--VILWYGMNIFNVYSNKSTNRCVSSTEAELHAIYEG 1728

Query: 1244 VKEAVWLKRIVGELLSQEFIPIIH-CDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1303
              ++  LK  + EL   +   I+   DS+ AI          + K   +K   I+  I +
Sbjct: 1729 YADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTWIKTEIIKEKIKE 1788

Query: 1304 KDVELVKVHTVENLSDMLTKALSAHRFKYLLDELNVK 1309
            K ++L+K+    N++D+LTK +SA  FK  +  L  K
Sbjct: 1789 KSIKLLKITGKGNIADLLTKPVSASDFKRFIQVLKNK 1790


HSP 2 Score: 85.1 bits (209), Expect = 6.4e-15
Identity = 85/363 (23.42%), Postives = 152/363 (41.87%), Query Frame = 0 

Query: 267 IMDSGCTFHMTPHRDFLTNFQKVDGGKVL--LGDNGTCDVKGTGSVQIAT-HDGMVRILT 326
           I+D+G   ++T  +  L N++  +       +G N +  VKG G ++I   H+       
Sbjct: 412 IIDTGSGVNITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGYGYIKIKNGHNNTDNKCL 471

Query: 327 NVRYVPKLKRNLISLGELDRSGCTIKSE-----------------NGVMKVTKGSLVKLR 386
              YVP+ +  +IS  +L +    + S                  NGV+ V    L++ R
Sbjct: 472 LTYYVPEEESTIISCYDLAKKTKMVLSRKYTRLGNKIIKIKTKIVNGVIHVKMNELIE-R 531

Query: 387 GTLRHGLYVLEGTTVSGSAAIASGKITDMSMLW---HKRLAHVS----ERGLQALSQQGL 446
            +    +  ++ T+  G       K+   S+     HKR+ H      E  ++    +  
Sbjct: 532 PSDDSKINAIKPTSSPGF------KLNKRSITLEDAHKRMGHTGIQQIENSIKHNHYEES 591

Query: 447 LGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYIHS----DLWGPTKEVSMGGSR 506
           L  +K     +C+ C + K+T+     G            S    D++GP    +    R
Sbjct: 592 LDLIKEPNEFWCQTCKISKATKRNHYTGSMNNHSTDHEPGSSWCMDIFGPVSSSNADTKR 651

Query: 507 YFISIIDDFSR--KVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNK 566
           Y + ++D+ +R      +  K  +    +  +  + VE Q  RKV+ + +D G EF N++
Sbjct: 652 YMLIMVDNNTRYCMTSTHFNKNAETILAQIRKNIQYVETQFDRKVREINSDRGTEFTNDQ 711

Query: 567 FNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACY 597
             ++  S+GI    T T     NG AER+ RTI+     LL  ++L +KFW  A  +A  
Sbjct: 712 IEEYFISKGIHHILTSTQDHAANGRAERYIRTIVTDATTLLRQSNLRVKFWEYAVTSATN 767

[Close]
BLAST of Pay0016963 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 2516.9 bits (6522), Expect = 0.0e+00
Identity = 1280/1344 (95.24%), Postives = 1285/1344 (95.61%), Query Frame = 0 

Query: 1    MASTRFEVSSLMDMEILLFGEKRLELFWFNIK------------NITESEKRDMDEMAYS 60
            MASTRFEVS            K++       K            NITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KENLESKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE    KNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+TDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI-----------IMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIE+           IMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1311
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

[Close]
BLAST of Pay0016963 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 2400.9 bits (6221), Expect = 0.0e+00
Identity = 1231/1331 (92.49%), Postives = 1237/1331 (92.94%), Query Frame = 0 

Query: 1    MASTRFEVSSLMDMEILLFGEKRLELFWFNIK------------NITESEKRDMDEMAYS 60
            MASTRFEVS            K++       K            NITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KENLESKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE    KNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+T+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA           
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA----------- 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
                             RLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  -----------------RLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI-----------IMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIE+           IMYLMICTRP
Sbjct: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1298
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303

[Close]
BLAST of Pay0016963 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 2350.9 bits (6091), Expect = 0.0e+00
Identity = 1212/1331 (91.06%), Postives = 1218/1331 (91.51%), Query Frame = 0 

Query: 1    MASTRFEVSSLMDMEILLFGEKRLELFWFNIK------------NITESEKRDMDEMAYS 60
            MASTRFEVS            K++       K            NITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KENLESKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE    KNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+TDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI-----------IMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIE+           IMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1298
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

[Close]
BLAST of Pay0016963 vs. ExPASy TrEMBL
Match: A0A5D3CTV2 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00910 PE=4 SV=1)

HSP 1 Score: 2280.4 bits (5908), Expect = 0.0e+00
Identity = 1145/1174 (97.53%), Postives = 1148/1174 (97.79%), Query Frame = 0 

Query: 159  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KE 218
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 219  NLESKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 278
                KNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 279  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 338
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 339  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 398
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 399  ASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 458
            ASGK+TDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 459  KHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 518
            KHTTKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 519  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 578
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 579  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 638
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 639  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 698
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 699  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 758
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 759  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 818
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 819  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 878
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 879  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 938
            LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 939  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 998
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 999  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 1058
            QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1059 LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI----------- 1118
            LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIE+           
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1119 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1178
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1179 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1238
            LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1239 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1298
            VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

Query: 1299 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1311
            VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1141 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1174

[Close]
BLAST of Pay0016963 vs. ExPASy TrEMBL
Match: A0A5A7TP18 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001600 PE=4 SV=1)

HSP 1 Score: 1979.1 bits (5126), Expect = 0.0e+00
Identity = 1043/1226 (85.07%), Postives = 1057/1226 (86.22%), Query Frame = 0 

Query: 99   MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 158
            MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 159  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KE 218
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 219  NLESKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 278
                KNCPLNKSREASTSEANVTDGYNSAEIT+GYDSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 279  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 338
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 339  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 398
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 399  ASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 458
            ASGK+TDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 459  KHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 518
            KH TKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 519  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 578
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 579  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 638
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 639  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 698
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 699  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 758
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 759  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 818
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 819  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 878
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK              
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-------------- 780

Query: 879  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 938
                               PVVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIY
Sbjct: 781  -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIY 840

Query: 939  MAQPKGYEVKGKE-----DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACV 998
            MAQPKGYEVKGKE     DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG          
Sbjct: 841  MAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------- 900

Query: 999  YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1058
                    T  +++L                 LKK  ++ +      ELKRILGMDVKRD
Sbjct: 901  -------STETHMMLVFTGN-----------NLKKVRTSIY----CCELKRILGMDVKRD 960

Query: 1059 KEKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI------ 1118
            KEKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIE+      
Sbjct: 961  KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1020

Query: 1119 -----IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDC 1178
                 IMYLMICTRPDLGYAMS                          SASVSLCYSRDC
Sbjct: 1021 NAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDC 1080

Query: 1179 DKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGE 1238
            DKSTLLEGFTDADYAADLDKR  L                       L    +EYISLGE
Sbjct: 1081 DKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGE 1113

Query: 1239 AVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1298
            AVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Sbjct: 1141 AVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1113

[Close]
BLAST of Pay0016963 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2516.9 bits (6522), Expect = 0.0e+00
Identity = 1280/1344 (95.24%), Postives = 1285/1344 (95.61%), Query Frame = 0 

Query: 1    MASTRFEVSSLMDMEILLFGEKRLELFWFNIK------------NITESEKRDMDEMAYS 60
            MASTRFEVS            K++       K            NITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KENLESKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE    KNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+TDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI-----------IMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIE+           IMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1311
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

[Close]
BLAST of Pay0016963 vs. NCBI nr
Match: KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 2400.9 bits (6221), Expect = 0.0e+00
Identity = 1231/1331 (92.49%), Postives = 1237/1331 (92.94%), Query Frame = 0 

Query: 1    MASTRFEVSSLMDMEILLFGEKRLELFWFNIK------------NITESEKRDMDEMAYS 60
            MASTRFEVS            K++       K            NITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KENLESKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE    KNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+T+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA           
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA----------- 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
                             RLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  -----------------RLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI-----------IMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIE+           IMYLMICTRP
Sbjct: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1298
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303

[Close]
BLAST of Pay0016963 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2350.9 bits (6091), Expect = 0.0e+00
Identity = 1212/1331 (91.06%), Postives = 1218/1331 (91.51%), Query Frame = 0 

Query: 1    MASTRFEVSSLMDMEILLFGEKRLELFWFNIK------------NITESEKRDMDEMAYS 60
            MASTRFEVS            K++       K            NITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KENLESKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE    KNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+TDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI-----------IMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIE+           IMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1298
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

[Close]
BLAST of Pay0016963 vs. NCBI nr
Match: TYK13826.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2280.4 bits (5908), Expect = 0.0e+00
Identity = 1145/1174 (97.53%), Postives = 1148/1174 (97.79%), Query Frame = 0 

Query: 159  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KE 218
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 219  NLESKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 278
                KNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 279  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 338
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 339  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 398
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 399  ASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 458
            ASGK+TDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 459  KHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 518
            KHTTKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 519  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 578
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 579  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 638
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 639  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 698
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 699  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 758
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 759  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 818
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 819  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 878
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 879  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 938
            LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 939  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 998
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 999  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 1058
            QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1059 LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI----------- 1118
            LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIE+           
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1119 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1178
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1179 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1238
            LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1239 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1298
            VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

Query: 1299 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1311
            VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1141 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1174

[Close]
BLAST of Pay0016963 vs. NCBI nr
Match: KAA0043826.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1979.1 bits (5126), Expect = 0.0e+00
Identity = 1043/1226 (85.07%), Postives = 1057/1226 (86.22%), Query Frame = 0 

Query: 99   MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 158
            MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 159  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS-----------KE 218
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKS           KE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 219  NLESKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 278
                KNCPLNKSREASTSEANVTDGYNSAEIT+GYDSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 279  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 338
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 339  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 398
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 399  ASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 458
            ASGK+TDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 459  KHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 518
            KH TKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 519  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 578
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 579  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 638
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 639  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 698
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 699  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 758
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 759  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 818
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 819  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 878
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK              
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-------------- 780

Query: 879  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 938
                               PVVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIY
Sbjct: 781  -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIY 840

Query: 939  MAQPKGYEVKGKE-----DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACV 998
            MAQPKGYEVKGKE     DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG          
Sbjct: 841  MAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------- 900

Query: 999  YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1058
                    T  +++L                 LKK  ++ +      ELKRILGMDVKRD
Sbjct: 901  -------STETHMMLVFTGN-----------NLKKVRTSIY----CCELKRILGMDVKRD 960

Query: 1059 KEKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEI------ 1118
            KEKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIE+      
Sbjct: 961  KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1020

Query: 1119 -----IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDC 1178
                 IMYLMICTRPDLGYAMS                          SASVSLCYSRDC
Sbjct: 1021 NAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDC 1080

Query: 1179 DKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGE 1238
            DKSTLLEGFTDADYAADLDKR  L                       L    +EYISLGE
Sbjct: 1081 DKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGE 1113

Query: 1239 AVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1298
            AVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Sbjct: 1141 AVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1113

[Close]
BLAST of Pay0016963 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 302.0 bits (772), Expect = 2.4e-81
Identity = 182/488 (37.30%), Postives = 283/488 (57.99%), Query Frame = 0 

Query: 789  LTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKW 848
            L C A +   EP T+ EA        W  AM++E+ ++    TW +   PPN+K I  KW
Sbjct: 77   LVCIAKA--KEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKW 136

Query: 849  IYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFI 908
            +YKIK  + G  + RYKARLVAKGYTQ+EG+DF E FSPV + +S++LIL+I+  ++  +
Sbjct: 137  VYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 196

Query: 909  EQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDM----VCRLHKSLYGLKQSPRQWYIRF 968
             Q+D++ AFL+G+L+E IYM  P GY  +  + +    VC L KS+YGLKQ+ RQW+++F
Sbjct: 197  HQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKF 256

Query: 969  DTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFE 1028
               ++  GF ++  D   Y+ +     ++ +L+YVDD+I+ S + A + ELK QL + F+
Sbjct: 257  SVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 316

Query: 1029 MKDLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSS 1088
            ++DLG LK  LG+++ R      + I Q  Y + LL++  + G K  S P+      S+ 
Sbjct: 317  LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 376

Query: 1089 Q-----CPVTKQERIEIIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKG 1148
                       +  I  +MYL I TR D+ +A++ +S+F   P   H +AV  +L Y+KG
Sbjct: 377  SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKG 436

Query: 1149 SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVAL 1208
            +    L YS   +    L+ F+DA + +  D RRS +G+   L  +++SWK   Q VV+ 
Sbjct: 437  TVGQGLFYSSQAEMQ--LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSK 496

Query: 1209 STTESEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHI 1267
            S+ E+EY +L  A  E +WL +   EL L      ++ CD+ +AIH+A N   HER+KHI
Sbjct: 497  SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 552

[Close]
BLAST of Pay0016963 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 114.8 bits (286), Expect = 5.3e-25
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 0 

Query: 353 GVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQ 412
           GV+KV KG    L+G     LY+L+G+  +G + +A     D + LWH RLAH+S+RG++
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAE-TAKDETRLWHSRLAHMSQRGME 86

Query: 413 ALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWG 465
            L ++G L   K   L FCE CI GK+ RV F  G+HTTK  LDY+HSDLWG
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]
BLAST of Pay0016963 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24
Identity = 77/230 (33.48%), Postives = 117/230 (50.87%), Query Frame = 0 

Query: 993  IYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQ 1052
            +YLLLYVDD++L       +  L  QLS+ F MKDLG +   LG+ +K       L +SQ
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 60

Query: 1053 ESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQC----PVTKQERIEIIMYLMICTRPDL 1112
              Y  ++L    M   K +STPL      S S      P   +  +  + YL + TRPD+
Sbjct: 61   TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTL-TRPDI 120

Query: 1113 GYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAAD 1172
             YA++++ + M  P    +  +K VLRY+KG+    L   ++   +  ++ F D+D+A  
Sbjct: 121  SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN--VQAFCDSDWAGC 180

Query: 1173 LDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVW 1219
               RRS +G    L  N++SW    QP V+ S+TE+EY +L     E  W
Sbjct: 181  TSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of Pay0016963 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-17
Identity = 52/120 (43.33%), Postives = 77/120 (64.17%), Query Frame = 0 

Query: 787 YALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQS 846
           Y+LT    +I+ EP   +  I +     W  AM+EEL +L +N+TW LVP P NQ ++  
Sbjct: 16  YSLTITT-TIKKEP---KSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGC 75

Query: 847 KWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDM 906
           KW++K K  + G +  R KARLVAKG+ Q+EG+ F E +SPVVR ++IR IL++A   ++
Sbjct: 76  KWVFKTKLHSDG-TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130

[Close]
BLAST of Pay0016963 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 9.1e-17
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 563 NRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHL 622
           NRTI+E+ R +L    LP  F  +AA TA ++IN+ PSTA+N   P EVW    P+  +L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 623 RVFGCTAYAHVKDGKLNKRALK 645
           R FGC AY H  +GKL  RA K
Sbjct: 62  RRFGCVAYIHCDEGKLKPRAKK 83

The following BLAST results are available for this feature:
BLAST of Pay0016963 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109789.1e-27241.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041463.5e-17030.11Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT942.4e-13929.44Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW21.1e-13628.04Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P0C2J71.8e-3824.18Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of Pay0016963 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UB250.0e+0095.24Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A5A7U2U70.0e+0092.49Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku... [more]
A0A5D3DNU10.0e+0091.06Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A5D3CTV20.0e+0097.53Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488... [more]
A0A5A7TP180.0e+0085.07Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
BLAST of Pay0016963 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050719.10.0e+0095.24putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0047995.10.0e+0092.49retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa... [more]
TYK25306.10.0e+0091.06putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
TYK13826.10.0e+0097.53putative polyprotein [Cucumis melo var. makuwa][more]
KAA0043826.10.0e+0085.07putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
BLAST of Pay0016963 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.12.4e-8137.30cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00300.15.3e-2548.21Gag-Pol-related retrotransposon family protein [more]
ATMG00810.11.6e-2433.48DNA/RNA polymerases superfamily protein [more]
ATMG00820.11.8e-1743.33Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00710.19.1e-1748.78Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..122
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 42..167
e-value: 1.5E-30
score: 105.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..239
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 38..1178
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1158..1295
e-value: 4.29711E-66
score: 217.336
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 457..553
e-value: 1.1E-10
score: 41.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 448..616
score: 24.182333
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 829..1075
e-value: 7.6E-72
score: 241.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 447..627
e-value: 5.6E-45
score: 155.1
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 372..439
e-value: 4.3E-16
score: 58.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 456..625
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 828..1263

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0016963.1Pay0016963.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding