Pay0013506 (gene) Melon (Payzawat) v1

Overview
NamePay0013506
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionprotein ANTI-SILENCING 1 isoform X1
Locationchr04: 15001723 .. 15005008 (-)
RNA-Seq ExpressionPay0013506
SyntenyPay0013506
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGCCGCAAATAAGTTTCCGTATGCACAGCGCTACTTGTAGTTAGGTTTAAATATGTCCTTGCGTTCTAGTATTATATATCAACAAGTAACACTAGAGTTCTATGATTAACAAGCTAAAATATCCCAAGAGAAAAACAAACGCAAGATAAGGGAAATAACAAGGAAAATAAAGAAATAAGTTAAAAGAGCCCTCTCTTTCAAATGAGCTATCACCCCCAAAACAATCCTGCCTCCACACTGAATCCCAAAACCCTACAAAAACCCTTCAGCTGGTCCTCGCAGGTAAAAATATTCTTCTGCTGATCCCCTACCCCACTTTCTACTTGTCGAATTCTCTTCTAACCCTTTTTCTTTTCATACACTCTCATAATTGGAGGTCTCGCAGAACATAAATACCGATTTCTTTGACATCCTCAAAGCAAACTAATCTAGTCCATTGCTCTTTTTATTTGCATATATGTTATATTTAGATTTGGCCTTGAAGAAATAAAAGCTCCATTGCCCTGTTTGATTCATTGCAATGGTTACAGACCCATTGTTGGTAGCAGAGGATTCTTAGCCGACCCTAGCAAACAAGTCAAATATGTTGGCCATCTGACCCTCCCAAAATCATTGCATCACAAGCATACTAAAGAGATGGTAACTCATATTTATTAAATATGGTAGCACATGGTTATTAGAATATCCCCAGTAGATTTTGGAGTACAATTCTTGTGTGCATTTCTTTAATATTTTGTTCTCAGGCCTCTTAGGGAAGTGCATTCTTGACACCACATTGTTCTCAGGCCAATACTCTTGAGTCTGATATGGCAATGGAGTGGGTACTATGGCAAGAGCGGTCAGATTTGTGTTGAAAAAAGTTGTATGAGGTACTATGACCTTTTTAACAATTTGGTGTTGTTGATGAATATGTTTGATTGTTTCTAATCACCATAGCTCATGAATACCTAGGTATTTGAAAAAGTTTATGTAAATTATAGGATGATGAAGGACTTTTGACTCATGGATTAAGTTTATCCGTAATGAAGTTGGGAAGTGTAGTTTACATTTGATATACGGTTTACTTATCTTAAGCTATGAATTCGTTGATCTCACATGTTATATAATCTTCGGCTATGTAAATCCCTAATGTTAAAACCCACTGCTCTCAATTTTCTTCTAGGGTATATATAACTCATAAACCTATGAACCAAACCCGAGTGGTTTAAAAAAGGATTGTGTCTAAATAAAGTGAGATTGCAATTAGTTTAGATTGAGAATAATAATGATGAAGGAGGGAGCGAATAACACCTACTGATCTTACATGAAAAACCCTTAAACCAATTAAAATATGAGTTTCAAACTTTCTTTCCTTGCTCTCTTATAAGAAGAGACCTACTCTATTTTATCTCTCACTTTACTCCCTTGTTGGAGATTTTAGATTGCTTTGGCAACCATGGGTCCCCAAAGATATTTGCTATCAAACAACTCCAGTGGTTCCAAATTGTCCAAATCAATATGAAAGATTTAAAGGCCATATATTGATCTTAAACAAAGCGTAAGATTTAATGGCCCAAAACAAAATTTCTAAGATACTTCTTTAAGATTTTCTCATTATTTAATACGAGCAACATAAGCTCATGCCCCTGAAATTCAGAACTACACAAACTCAAGGTTTCCATATCTATTAGGATGAAATTGGTTTGTTATTACCAAACGTCAGTACGTTTAGTACATTTTTTTTTCTTTTTGTCCACTCTTCTTGGGCCTGTTTATATGACTTACATTAATGAAAGGCTTAAGTCAAAATTACTTACCCTCTATTGTAATAAAATCCATGTATTAAGCTCGAAAAAATCACTTTTTTTTTTTTTATCTGATTTCCCCTATCTATTCTTCTAGGATCAAAAGGAGGAGATCCTCAATCTTAAGAGTAAGCTAAAATTAACGAAAAAGGTGTCTGGTAGCTTGATCTAGACTTTGGTAAGTACAAGTAGAACATGAGTCATGGCCCTTTTAGACTCTCTTATGAGAGATAAAGTCTTGCAAATACCTAATAATGGAGTTGTTTATAATTCATAGGCATTTTCTTTCTGGAACCAACGTGAATATTTGGTAGCATGTACAGTCTCATTGTCGTGTAAATTTCTTAAAAAAATTATAGTTTGTATGATTTCTCTTGATAACATTCATTTCTTCTTTTTTTTTTTCCTTATATTTGCGCGTGCTTGAGTCAACTTATACACACATGTATATAATGATATTATATAGCCCATCTATATTTTTGTTTTCCAATGTTAGATTCTTAACATCTCAACAACATATCCCTCTTTGTGTTCACCAATCTTGATCAAATCTTAATTTCATTTTATTGGACCAAATACTCGTTTACACTTTATGAGCTCTAATACCATATGTGATAGTATGAGATTCCATCTCAAAACCAGTTGGTAATGAGAGAAGTAGTCTATCTATCTTATAAGAAGTGTGAGTCCCCTTGATTTTTCCAATGTGGGATTCTCAACATCTCAATAGTACGTAATTTGAATTTATGAAACTAGATGCTTTTCATTTTTCAACATACATTACGTTTTCTTTAGTTCTTTTAAGAAAAACATTTTACACCTAGTGATTAGTCCAGTCATAGCTTCAAAGTCCAAAGTCTTTGGTCTAGTACAGTAAAGGCTTTATTATCTAAGTTGTGGTTTGGACAAAAATTAGAGGTTTTCAATGACAAGCATCTTTCTTGGGATGATTGGTTTGCCTCTTCTCGTTTGAAGGCCTCTTAATGGTATTTCTCTTTCTAAAAGTTTTGCAGGATATACTATTCTAGATATTTGTCTCAATTGGAATGCTTTTATGTTGCTCTCATAATTCTATTATGTTTTCTTGTTTTAGTTCTCTTTCTATTATGATTTTGTATCCCTGTTTTGGTTTCTTGTACTTTTAAGTATTAGTCTCTTCCATCATGTCACTAAAAAGTGAATGTTTAAGATGGTTTTTGGCTCAGTTACGAGCTTGTTACATGGAAGGACCTTGTTGAAATAAAATCTAGTGTTTCACTCCATAGAAACTGCTAAGAAAATATGCATCCGTTGTAAATCTATTATTTCTAGTTTCAAAGTTGAAACTATCTTTAAATTGTCTAATGACTATCATTTGTTGAGTTCCTCTCATGTGGAGCTGTAGTGGCTGCAAAGTATTATACAAAGCTACTTTATCTTTGAATACTCGTTCATGATTTATATAGATTTCTTTTCTCCAGGTTTATGTGCAGTGACAACAGAGGAGTCAAAGTTTGA

mRNA sequence

ATGAGAGCCGCAAATAAGTTTCCGTATGCACAGCGCTACTTATTTGGCCTTGAAGAAATAAAAGCTCCATTGCCCTGTTTGATTCATTGCAATGGTTACAGACCCATTGTTGGTAGCAGAGGATTCTTAGCCGACCCTAGCAAACAAGTCAAATATGTTGGCCATCTGACCCTCCCAAAATCATTGCATCACAAGCATACTAAAGAGATGGGAAGTGCATTCTTGACACCACATTGTTCTCAGGCCAATACTCTTGAGTCTGATATGGCAATGGAGTGGGTACTATGGCAAGAGCGGTTTATGTGCAGTGACAACAGAGGAGTCAAAGTTTGA

Coding sequence (CDS)

ATGAGAGCCGCAAATAAGTTTCCGTATGCACAGCGCTACTTATTTGGCCTTGAAGAAATAAAAGCTCCATTGCCCTGTTTGATTCATTGCAATGGTTACAGACCCATTGTTGGTAGCAGAGGATTCTTAGCCGACCCTAGCAAACAAGTCAAATATGTTGGCCATCTGACCCTCCCAAAATCATTGCATCACAAGCATACTAAAGAGATGGGAAGTGCATTCTTGACACCACATTGTTCTCAGGCCAATACTCTTGAGTCTGATATGGCAATGGAGTGGGTACTATGGCAAGAGCGGTTTATGTGCAGTGACAACAGAGGAGTCAAAGTTTGA

Protein sequence

MRAANKFPYAQRYLFGLEEIKAPLPCLIHCNGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTLESDMAMEWVLWQERFMCSDNRGVKV
Homology
[Close]
BLAST of Pay0013506 vs. ExPASy Swiss-Prot
Match: Q9LYE3 (Protein ANTI-SILENCING 1 OS=Arabidopsis thaliana OX=3702 GN=ASI1 PE=4 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 3.5e-07
Identity = 32/74 (43.24%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 26  CLIHCNGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTL 85
           CL+  +G RP+V S   +  P K   + GH+ L K+   +  +EM  A  T H SQ N L
Sbjct: 553 CLLLSSG-RPLVASFAKITPPGKPSLFSGHIKLHKT---QTRREMRDAVATSHSSQPNNL 612

Query: 86  ESDMAMEWVLWQER 100
           E DMAMEW L Q R
Sbjct: 613 EFDMAMEWCLHQAR 622

[Close]
BLAST of Pay0013506 vs. ExPASy TrEMBL
Match: A0A6J1DHT4 (protein ANTI-SILENCING 1 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111021034 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 31  NGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTLESDMA 90
           +G+RP+VGSRGFLAD SK+V +VGHL+LPK L  K+T EM +A  T HCSQ NT+E D+A
Sbjct: 320 SGFRPVVGSRGFLADSSKRVNFVGHLSLPKLLRQKYTMEMKNAISTSHCSQPNTVEWDLA 379

Query: 91  MEWVLWQER 100
           MEW L QER
Sbjct: 380 MEWRLLQER 388

[Close]
BLAST of Pay0013506 vs. ExPASy TrEMBL
Match: A0A6J1DJF3 (protein ANTI-SILENCING 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021034 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 31  NGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTLESDMA 90
           +G+RP+VGSRGFLAD SK+V +VGHL+LPK L  K+T EM +A  T HCSQ NT+E D+A
Sbjct: 395 SGFRPVVGSRGFLADSSKRVNFVGHLSLPKLLRQKYTMEMKNAISTSHCSQPNTVEWDLA 454

Query: 91  MEWVLWQER 100
           MEW L QER
Sbjct: 455 MEWRLLQER 463

[Close]
BLAST of Pay0013506 vs. ExPASy TrEMBL
Match: A0A6J1DL02 (protein ANTI-SILENCING 1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111021034 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 31  NGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTLESDMA 90
           +G+RP+VGSRGFLAD SK+V +VGHL+LPK L  K+T EM +A  T HCSQ NT+E D+A
Sbjct: 385 SGFRPVVGSRGFLADSSKRVNFVGHLSLPKLLRQKYTMEMKNAISTSHCSQPNTVEWDLA 444

Query: 91  MEWVLWQER 100
           MEW L QER
Sbjct: 445 MEWRLLQER 453

[Close]
BLAST of Pay0013506 vs. ExPASy TrEMBL
Match: A0A6J1DH56 (protein ANTI-SILENCING 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021034 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 31  NGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTLESDMA 90
           +G+RP+VGSRGFLAD SK+V +VGHL+LPK L  K+T EM +A  T HCSQ NT+E D+A
Sbjct: 397 SGFRPVVGSRGFLADSSKRVNFVGHLSLPKLLRQKYTMEMKNAISTSHCSQPNTVEWDLA 456

Query: 91  MEWVLWQER 100
           MEW L QER
Sbjct: 457 MEWRLLQER 465

[Close]
BLAST of Pay0013506 vs. ExPASy TrEMBL
Match: A0A498HP14 (BAH domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_012313 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.0e-11
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 0 

Query: 26  CLIHCNGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTL 85
           CL+  NG RP+VGS G      K+  + GHLT+ K L H++ +EM  A  T HCSQ NT+
Sbjct: 670 CLLLSNG-RPLVGSFGTPCSSEKKAPFFGHLTIEK-LRHQNAREMKEAISTSHCSQPNTI 729

Query: 86  ESDMAMEWVLWQER 100
           E DMAMEW L QER
Sbjct: 730 EYDMAMEWCLQQER 741

[Close]
BLAST of Pay0013506 vs. NCBI nr
Match: XP_022153561.1 (protein ANTI-SILENCING 1 isoform X3 [Momordica charantia])

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 31  NGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTLESDMA 90
           +G+RP+VGSRGFLAD SK+V +VGHL+LPK L  K+T EM +A  T HCSQ NT+E D+A
Sbjct: 385 SGFRPVVGSRGFLADSSKRVNFVGHLSLPKLLRQKYTMEMKNAISTSHCSQPNTVEWDLA 444

Query: 91  MEWVLWQER 100
           MEW L QER
Sbjct: 445 MEWRLLQER 453

[Close]
BLAST of Pay0013506 vs. NCBI nr
Match: XP_022153558.1 (protein ANTI-SILENCING 1 isoform X1 [Momordica charantia] >XP_022153559.1 protein ANTI-SILENCING 1 isoform X1 [Momordica charantia])

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 31  NGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTLESDMA 90
           +G+RP+VGSRGFLAD SK+V +VGHL+LPK L  K+T EM +A  T HCSQ NT+E D+A
Sbjct: 395 SGFRPVVGSRGFLADSSKRVNFVGHLSLPKLLRQKYTMEMKNAISTSHCSQPNTVEWDLA 454

Query: 91  MEWVLWQER 100
           MEW L QER
Sbjct: 455 MEWRLLQER 463

[Close]
BLAST of Pay0013506 vs. NCBI nr
Match: XP_022153560.1 (protein ANTI-SILENCING 1 isoform X2 [Momordica charantia])

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 31  NGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTLESDMA 90
           +G+RP+VGSRGFLAD SK+V +VGHL+LPK L  K+T EM +A  T HCSQ NT+E D+A
Sbjct: 397 SGFRPVVGSRGFLADSSKRVNFVGHLSLPKLLRQKYTMEMKNAISTSHCSQPNTVEWDLA 456

Query: 91  MEWVLWQER 100
           MEW L QER
Sbjct: 457 MEWRLLQER 465

[Close]
BLAST of Pay0013506 vs. NCBI nr
Match: XP_022153562.1 (protein ANTI-SILENCING 1 isoform X4 [Momordica charantia] >XP_022153563.1 protein ANTI-SILENCING 1 isoform X4 [Momordica charantia])

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-17
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 31  NGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTLESDMA 90
           +G+RP+VGSRGFLAD SK+V +VGHL+LPK L  K+T EM +A  T HCSQ NT+E D+A
Sbjct: 320 SGFRPVVGSRGFLADSSKRVNFVGHLSLPKLLRQKYTMEMKNAISTSHCSQPNTVEWDLA 379

Query: 91  MEWVLWQER 100
           MEW L QER
Sbjct: 380 MEWRLLQER 388

[Close]
BLAST of Pay0013506 vs. NCBI nr
Match: XP_009367930.1 (PREDICTED: uncharacterized protein LOC103957491 isoform X1 [Pyrus x bretschneideri] >XP_018505427.1 PREDICTED: uncharacterized protein LOC103957491 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 77.4 bits (189), Expect = 8.5e-11
Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 26  CLIHCNGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTL 85
           CL+  NG RP+VGS G      K+  ++GHLT+ K L H++ +EM  A  T HCSQ NT+
Sbjct: 623 CLLLSNG-RPLVGSFGTPCSSEKKAPFLGHLTIEK-LRHQNAREMKEAISTSHCSQPNTI 682

Query: 86  ESDMAMEWVLWQER 100
           E DMAMEW L QER
Sbjct: 683 EYDMAMEWCLQQER 694

[Close]
BLAST of Pay0013506 vs. TAIR 10
Match: AT5G11470.1 (bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 55.8 bits (133), Expect = 2.5e-08
Identity = 32/74 (43.24%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 26  CLIHCNGYRPIVGSRGFLADPSKQVKYVGHLTLPKSLHHKHTKEMGSAFLTPHCSQANTL 85
           CL+  +G RP+V S   +  P K   + GH+ L K+   +  +EM  A  T H SQ N L
Sbjct: 599 CLLLSSG-RPLVASFAKITPPGKPSLFSGHIKLHKT---QTRREMRDAVATSHSSQPNNL 658

Query: 86  ESDMAMEWVLWQER 100
           E DMAMEW L Q R
Sbjct: 659 EFDMAMEWCLHQAR 668

The following BLAST results are available for this feature:
BLAST of Pay0013506 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LYE33.5e-0743.24Protein ANTI-SILENCING 1 OS=Arabidopsis thaliana OX=3702 GN=ASI1 PE=4 SV=2[more]
BLAST of Pay0013506 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DHT42.9e-1765.22protein ANTI-SILENCING 1 isoform X4 OS=Momordica charantia OX=3673 GN=LOC1110210... [more]
A0A6J1DJF32.9e-1765.22protein ANTI-SILENCING 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110210... [more]
A0A6J1DL022.9e-1765.22protein ANTI-SILENCING 1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC1110210... [more]
A0A6J1DH562.9e-1765.22protein ANTI-SILENCING 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC1110210... [more]
A0A498HP147.0e-1152.70BAH domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_012313 PE=4 SV... [more]
BLAST of Pay0013506 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022153561.16.1e-1765.22protein ANTI-SILENCING 1 isoform X3 [Momordica charantia][more]
XP_022153558.16.1e-1765.22protein ANTI-SILENCING 1 isoform X1 [Momordica charantia] >XP_022153559.1 protei... [more]
XP_022153560.16.1e-1765.22protein ANTI-SILENCING 1 isoform X2 [Momordica charantia][more]
XP_022153562.16.1e-1765.22protein ANTI-SILENCING 1 isoform X4 [Momordica charantia] >XP_022153563.1 protei... [more]
XP_009367930.18.5e-1152.70PREDICTED: uncharacterized protein LOC103957491 isoform X1 [Pyrus x bretschneide... [more]
BLAST of Pay0013506 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G11470.12.5e-0843.24bromo-adjacent homology (BAH) domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47073PROTEIN ANTI-SILENCING 1coord: 26..100
NoneNo IPR availablePANTHERPTHR47073:SF7BAH DOMAIN PROTEINcoord: 26..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0013506.1Pay0013506.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006325 chromatin organization
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0051171 regulation of nitrogen compound metabolic process
biological_process GO:0080090 regulation of primary metabolic process
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003676 nucleic acid binding