Pay0012613 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012613
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transmembrane protein, putative
Location	chr04: 32534813 .. 32537011 (-)
RNA-Seq Expression	Pay0012613
Synteny	Pay0012613

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAAGAATTACTCAAATTGGGCACAGGCTGTGGCCACTGCTTGGTGTTTCATGATGTTGTTAGGCCTTTTGTGTTGTTGTCTAAGCACCAACCCTCGCCACCACCACGACTCCTCCGCCGCTAATTCTAGCTGCACTTGCGACGGCGGTTATGCAGGTGTTTGAATTTTACAACACGGATATAGATACAGAAATAGATATGTTTTTCTTTTTCAGTTTCACATCTGATTCTTTTGTTTTTGTTTTGCTGTGATGGGGTGTTTTGGTTTGTTGATTATTATCTATTGTAAATAGAAACCGGAATTCAGAGTCATCTTTTTTCTTTTTCCTTCGCTTTTCCTCTTAATGGTGACACCATCTGCATAGAATTGCTTCACTTCTAATTACCAGATTGAAATAAACGAAAAAGATTATTGTAATCAATTCAATTTGAAGGCCGGAATTGTTTGACACCTTTACAGCCAAAAGAACAGAGTGGCTCCGGGAGCTGATCAGCCGCCTTGAATTTCAATGATTTTGAACTGAAAGCTGATTGATTTGGAACCAACCACTTGCACCCACTCAATTGCCAATGGCCCTAAGGCCTAAGTTATTTCCCTAAATACTTCTATTTTCCAAGTCTTATGGTTGAAAAAAACCTTTCTATATAAAACATTTGATTTAGATTGATAATTCAAATTCAATACTCTATTCTTTAACCATTGTTGATCAAATAGACAAGGATGTTATACTATTTTTCTCAAAAAGTTAGATGTTTGAATGGAGGGTTAAAATAGAATAGAGTGATGAGTGATGAGTGATGAGTGATGAGTGATTTGGGGTTAATTTGTGTATAAATAATAATATAAAGTAAGGAGGAGGTTAGCCAAAGTCTCCAGGCTGGGTGATATGCTAATAGACAAAATTGGAGTGTCAAATGAACTTTTCAAAAACAAAAGAAACAAAATACCTTTCTGTATCCATTCTTAACTATTAAGTTATTTTTCTCTCTATTTCATTATTAAGTATAATCATCTTTTTAAGTACTATATATTTCTTAGAAATATTTTGGATAACAAAAGGTTGACTACAAAGTATTGTGTTTCTTAATTCTTTGATTCAATTTTTTTTTTTTTTTTAATTTTGGTTAGAATTATTTAGATGCACCTAAATAATTGTTTTGGTAATAAATAAAATAGAAATTAAAGGTATATGGTAAGAAAAATGGGTGAGGAGAAATTTTATTATTTTAGGAAGTAAAGAAAAACCTTAATTAGTCACTATAATGTTTGAAGATTTTTTTGGGTATATGAAATGCCAAAAATGTATTGTTTCAATATCCAATCCAAATTTGACTGTTCTCAAATGAATAAATATATTCTGACAGATCCCAAAATTCTCTTTAATTAAGGGTTGAAATTTTCCTATCCACTATTGAATTAATTTTAACATTAAATCGATAATTACTCACACACCTAACCACATTAAGGATAATAATAAGAATAATAACTCAAGATTTCCCAAATGAGAAATGGAAGCAATTAAATTAAATTTCTTTACATGCCTTCATTACATTGAAATATTTAATCATCCTTCCTTCCAAAAGTTATTTAAGAATAATAAAATGGAAGCCATTGATTGATCATAAATTTTAAGGGTTTAATTATGGAAATCCTTCGATGAATCAAATTCAGGGTTGACCGGCTGCCAAGTCAGAGGTGACATTCCTTGAAACCCAAGAAATTTCAACGCAAAAAAGTCAACTAACGAAAAGTTCAAATCAACTCCACTCGTATACCTTTACTTTTTTTCTTAAAAGACCACTTCAAATTTCACATATAAGTTTGTGCTCTCATTTCTGAATCTTCAAACATTAACGATCCTTTTGGGTGTTTCAAATTTGGAGTAATGTCACCAATGAATTACTGTATTTGTTTTGGAGCGCAGAAGAAGAAAAAGAGCAATAATCAAACAGATGGGCACAAAGGTGGCCGGAAATTCAGACCGCCGAGAGGACACGGAGGGAGAGCGGCAGGTGGTGGTTCCGGCGCTGGAAATGGTAACTTGGCTGTTCTGACTGATCATGATGGTGGTGTTGCCTTGGCGGCGACGACGCTTGGTTTTGCGGTTGCTGCAGCTGCGTTAGTTGATGCTGGGGAACATGGCGGAAGCTGTGGTGGTGGAGAGTGCGGCGGTGGTGGCTGTGGTGGTGGTTGA

mRNA sequence

ATGGACAAGAATTACTCAAATTGGGCACAGGCTGTGGCCACTGCTTGGTGTTTCATGATGTTGTTAGGCCTTTTGTGTTGTTGTCTAAGCACCAACCCTCGCCACCACCACGACTCCTCCGCCGCTAATTCTAGCTGCACTTGCGACGGCGGTTATGCAGCGCAGAAGAAGAAAAAGAGCAATAATCAAACAGATGGGCACAAAGGTGGCCGGAAATTCAGACCGCCGAGAGGACACGGAGGGAGAGCGGCAGGTGGTGGTTCCGGCGCTGGAAATGGTAACTTGGCTGTTCTGACTGATCATGATGGTGGTGTTGCCTTGGCGGCGACGACGCTTGGTTTTGCGGTTGCTGCAGCTGCGTTAGTTGATGCTGGGGAACATGGCGGAAGCTGTGGTGGTGGAGAGTGCGGCGGTGGTGGCTGTGGTGGTGGTTGA

Coding sequence (CDS)

ATGGACAAGAATTACTCAAATTGGGCACAGGCTGTGGCCACTGCTTGGTGTTTCATGATGTTGTTAGGCCTTTTGTGTTGTTGTCTAAGCACCAACCCTCGCCACCACCACGACTCCTCCGCCGCTAATTCTAGCTGCACTTGCGACGGCGGTTATGCAGCGCAGAAGAAGAAAAAGAGCAATAATCAAACAGATGGGCACAAAGGTGGCCGGAAATTCAGACCGCCGAGAGGACACGGAGGGAGAGCGGCAGGTGGTGGTTCCGGCGCTGGAAATGGTAACTTGGCTGTTCTGACTGATCATGATGGTGGTGTTGCCTTGGCGGCGACGACGCTTGGTTTTGCGGTTGCTGCAGCTGCGTTAGTTGATGCTGGGGAACATGGCGGAAGCTGTGGTGGTGGAGAGTGCGGCGGTGGTGGCTGTGGTGGTGGTTGA

Protein sequence

MDKNYSNWAQAVATAWCFMMLLGLLCCCLSTNPRHHHDSSAANSSCTCDGGYAAQKKKKSNNQTDGHKGGRKFRPPRGHGGRAAGGGSGAGNGNLAVLTDHDGGVALAATTLGFAVAAAALVDAGEHGGSCGGGECGGGGCGGG

Homology

[Close]

BLAST of Pay0012613 vs. ExPASy TrEMBL
Match: A0A0A0LDL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733910 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.1e-27
Identity = 76/98 (77.55%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 43  NSSCTCDGGYAAQKKKKSNNQTDGHKGGRKFRPPRGHGGRAAGGGSGAGNGNLAVLTD-H 102
           N+ C C G    +KK  +NNQTDGHKGGRKFRPPRGHGGR   GGSGAGNGNLAVLTD H
Sbjct: 2   NNYCICFGAGQKKKKSNNNNQTDGHKGGRKFRPPRGHGGRTGVGGSGAGNGNLAVLTDHH 61

Query: 103 DGGVALAATTLGFAVAAAALVDAGEHGGSCGGGECGGG 140
           DGGVA+ A TLGFAVAAAA+VD  EHGGSCGGGECGGG
Sbjct: 62  DGGVAMVA-TLGFAVAAAAVVDVAEHGGSCGGGECGGG 98

[Close]

BLAST of Pay0012613 vs. ExPASy TrEMBL
Match: A0A5D2TKA7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G172900v1 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-11
Identity = 30/50 (60.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 3  KNYSNWAQAVATAWCFMMLLGLLCCCLSTNPRHHHDSSAANSSCTCDGGY 53
          ++Y NW QA A+AW FM+L+GL+CCCLST+P  H D+++ N+SC+CDGGY
Sbjct: 2  EHYLNWVQAFASAWAFMLLVGLICCCLSTHPTQHGDANSTNASCSCDGGY 51

[Close]

BLAST of Pay0012613 vs. ExPASy TrEMBL
Match: A0A5D2FAC1 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A09G184900v1 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 30/50 (60.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 3  KNYSNWAQAVATAWCFMMLLGLLCCCLSTNPRHHHDSSAANSSCTCDGGY 53
          ++Y NW QA A+AW FM+L+GL+CCCLST+P  H D+++ N+SC+CDGGY
Sbjct: 2  EHYLNWVQAFASAWAFMLLVGLVCCCLSTHPTQHGDANSTNASCSCDGGY 51

[Close]

BLAST of Pay0012613 vs. ExPASy TrEMBL
Match: A0A5D2JJD2 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G180700v1 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 30/50 (60.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 3  KNYSNWAQAVATAWCFMMLLGLLCCCLSTNPRHHHDSSAANSSCTCDGGY 53
          ++Y NW QA A+AW FM+L+GL+CCCLST+P  H D+++ N+SC+CDGGY
Sbjct: 2  EHYLNWVQAFASAWAFMLLVGLVCCCLSTHPTQHGDANSTNASCSCDGGY 51

[Close]

BLAST of Pay0012613 vs. ExPASy TrEMBL
Match: A0A5J5Q9G1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D09G167000v1 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 30/50 (60.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 3  KNYSNWAQAVATAWCFMMLLGLLCCCLSTNPRHHHDSSAANSSCTCDGGY 53
          ++Y NW QA A+AW FM+L+GL+CCCLST+P  H D+++ N+SC+CDGGY
Sbjct: 2  EHYLNWVQAFASAWAFMLLVGLVCCCLSTHPTQHGDANSTNASCSCDGGY 51

[Close]

BLAST of Pay0012613 vs. NCBI nr
Match: KAG6580518.1 (hypothetical protein SDJN03_20520, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-45
Identity = 108/153 (70.59%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 1   MDKNYSNWAQAVATAWCFMMLLGLLCCCLSTNPRHHHDSSAANSSCTCDGGYAAQ----- 60
           M+KNY NWAQA+ TAWCFM+LLGLLCCCLST PRHH D+SA+NSSCTCDGGYAA      
Sbjct: 1   MEKNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAMSCICF 60

Query: 61  ---KKKKSNNQTDGHKGGRKFRPPRGHGGRAAGGGSGAGNGNLAVLTDHDGGVALAATTL 120
              K++K++NQ  G  G RKFRPPRG+ G  A   S  GNGNL VLTDHDGGV L A+T 
Sbjct: 61  RGPKEEKNSNQAHGDNGARKFRPPRGYSGGTAAAASTPGNGNLTVLTDHDGGVVL-ASTF 120

Query: 121 GFAVAAAALVDAGEHGGSCGG-GECGGGGCGGG 145
           GFAVAAAA+VDAGEHGG CGG G CGGGGCGGG
Sbjct: 121 GFAVAAAAVVDAGEHGGECGGAGGCGGGGCGGG 152

[Close]

BLAST of Pay0012613 vs. NCBI nr
Match: XP_038903553.1 (uncharacterized protein LOC120090114 [Benincasa hispida])

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-22
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MDKNYSNWAQAVATAWCFMMLLGLLCCCLSTNPRHHHDSSAANSSCTCDGGYA 54
          MDKNYSNWAQA+ATAWCFMMLLGLLCCCLSTNPRHH DSSAANSSCTCDGGYA
Sbjct: 1  MDKNYSNWAQALATAWCFMMLLGLLCCCLSTNPRHHDDSSAANSSCTCDGGYA 53

[Close]

BLAST of Pay0012613 vs. NCBI nr
Match: XP_023528737.1 (loricrin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21
Identity = 72/101 (71.29%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 45  SCTCDGGYAAQKKKKSNNQTDGHKGGRKFRPPRGHGGRAAGGGSGAGNGNLAVLTDHDGG 104
           SC C   +   K+KK +NQ  G KG RKFRPPRG+ G  A GGS  GNGNL VLTDHDGG
Sbjct: 2   SCIC---FRGPKEKKKSNQAHGDKGARKFRPPRGYTGGTAAGGSTTGNGNLTVLTDHDGG 61

Query: 105 VALAATTLGFAVAAAALVDAGEHGGSCGGGECGG-GGCGGG 145
           V L A+T GFAVAAAA+VDAGEHGGSCGGGECGG GGCGGG
Sbjct: 62  VVL-ASTFGFAVAAAAVVDAGEHGGSCGGGECGGAGGCGGG 98

[Close]

BLAST of Pay0012613 vs. NCBI nr
Match: KAG6643282.1 (hypothetical protein CIPAW_09G199500 [Carya illinoinensis] >KAG6697467.1 hypothetical protein I3842_09G201100 [Carya illinoinensis])

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-11
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 1  MDKNYSNWAQAVATAWCFMMLLGLLCCCLSTNPRHHHDSSAANSSCTCDGGYA 54
          M  +Y NWAQA+A+AW FM+L+GL+CCCLST PR H   S+ N SC+CDGG+A
Sbjct: 1  MGHHYLNWAQALASAWGFMLLVGLMCCCLSTTPRQHGSISSGNDSCSCDGGHA 53

[Close]

BLAST of Pay0012613 vs. NCBI nr
Match: TYI65682.1 (hypothetical protein E1A91_D09G172900v1 [Gossypium mustelinum])

HSP 1 Score: 78.6 bits (192), Expect = 5.0e-11
Identity = 30/50 (60.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 3  KNYSNWAQAVATAWCFMMLLGLLCCCLSTNPRHHHDSSAANSSCTCDGGY 53
          ++Y NW QA A+AW FM+L+GL+CCCLST+P  H D+++ N+SC+CDGGY
Sbjct: 2  EHYLNWVQAFASAWAFMLLVGLICCCLSTHPTQHGDANSTNASCSCDGGY 51

The following BLAST results are available for this feature:

BLAST of Pay0012613 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0012613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDL8	4.1e-27	77.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733910 PE=4 SV=1	[more]
A0A5D2TKA7	2.4e-11	60.00	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G172900v1 P...	[more]
A0A5D2FAC1	3.2e-11	60.00	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A09G184900v1 PE=...	[more]
A0A5D2JJD2	3.2e-11	60.00	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G180700v1 P...	[more]
A0A5J5Q9G1	3.2e-11	60.00	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D09G167000v1 PE...	[more]

BLAST of Pay0012613 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580518.1	1.1e-45	70.59	hypothetical protein SDJN03_20520, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038903553.1	2.8e-22	96.23	uncharacterized protein LOC120090114 [Benincasa hispida]	[more]
XP_023528737.1	1.1e-21	71.29	loricrin-like [Cucurbita pepo subsp. pepo]	[more]
KAG6643282.1	2.9e-11	62.26	hypothetical protein CIPAW_09G199500 [Carya illinoinensis] >KAG6697467.1 hypothe...	[more]
TYI65682.1	5.0e-11	60.00	hypothetical protein E1A91_D09G172900v1 [Gossypium mustelinum]	[more]

BLAST of Pay0012613 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012613.1	Pay0012613.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane