Pay0011405 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAGAGTAGTAAAACAAAGCTTCTCAATAATATAGGAAAATATAAAGTTGGTTGATAAATATAAATGTACTTTAGGTGGGTGATCCGAAAAGCATTTAAGGAAGCAGTTCCCTCCCTTAGGGCAAGCAAACGGTCCAAAGGCAGTCCAAATTTCACGTTTGTAGTTTACAACGGAGCCCTTGGTTTTGCGGCGAGTTTTTCCCGATTCATCTCCTCCACTAAACCCTCCGCCGGAAACCGACTGCAAGAACCGAGCGAGTTACAATGTCTTCTGGATTCAACAATGGCTTAAGGGTTTTCAGAGCCTGTAGAACTCTCTTAGCTCCGTCCAAATCCTCTGCTACCGTTCCCGCCACCGCTCCCAAATCCAAGACGACCACGAAGCCGAAGACGAAGCTGCCCAAGGTGAAGACTCCTCCGAGCTCCGTTGCTGCTGCTGGTGTTGCAGCCACGCCCGAGCCGAAAATCAAAAAGGGAACGTCTCGACCGTCGGGGATTCTGAAGGTCACCCAGGTTTCTCCAGCGTTGAGCAACTTCTTGGGTGTATCGGAGGCTTCTCGCACCGACGCCGTCACGCAGATCTGGTCCTACATCAAGCTCCACAACCTTCAGGTTCGTAGCTTATAACCGTTTTGGTTTCTAGGGAATTGGGTGGAAAAATGGACGTGCAAATAGGCTAAAATGCACCTCCAACTTCCAATCCAGGAATTGCATCAACTAGTTAACCTCTAAACTGAAATCTATGGTTTCTCTCCCCGCCGTAATGGGGGTCATTTAGTTTTTCCGATGAGGAAAAGTTTAGTAATCTGAAGGAAAATGGAGTATGGAGGTTTCATCCATAACTGGTGCTCCCAATGCTTATTATTGCTGAGGTCGAGGAACCAGTTTTCTCCATGATCCGGGTAGATGCAAAGCCATCTGAGGAATTATATTTTCGTTCCAAAAAAAGAAAAGTTTACCTCTAAACTGAGATGGAATCTTTTCGGGAAGTACTCGTTACCGTGTTGTTGCTTATCTAAATTGTGCAATGGCCAATTGTGCTTGTACTTAGACTGGTAAATTCCCTGTTGTTCTTTCTTAAACTTTGGGGGATGAAAATCTTTGGAATATCTACACGATGGACTCTTGGAGATATATAGCTGACTTCTGGGCATTGACAATTCCCTCCCTTTTTCGATGAGAATGCTTAACACTTAAAAGGTTGTGATATAGGGATTATCTTATATAGTAGGTTTATTGGTCCTTGCATGGTCATTGATTTGGCTTAGTACCTCAACTCAGCGAAAGTATAGAGACCATAATTGAAAGTATAAAGATCAGAAGGACGGACTCATACTTGAATGTATAGGGACCAAAATGAACCAAAACCAAAAAGTATAAGGCTCAAACTAGTATATAGTAATAGTATTACTCTATAAATGGTTGAAATTGATATTTTACTTAAGAAAGATTTGGTACTGATCCCTGTAATTTATTTGTGAGCTCGACAGTTTAGCCAGAGTTAGCATAACTTGAAGATATTATTCTTTTTGGAATGGAGTTCGTTCATGTAGTTAGTTGTGGATTCCTTCTGTAGGCTTAATTTTTTATCTCTCTAGTTTTGCATTCATTTGTACAATTCTTTCATTCTAAGTTTCTTCCCTATGATTTGTGAAATATTATACGTAAAATTTCTGGGGGAACTTTTTGAGCTGCACGCAATTACTCATAGTTTTCAAAGAAAACACAAACGGCTTAGAGCCAAAGAGCTTTACATTGTTATTTTAGTTGATAATTTGGGAGTTTCTGTGATCCAAGCCATGACATAACGATATATTTCATTGTCGTCGCCTGCAGAATCCTGATAACAAAAGAGAGATCTACTGCGACGATAAACTTAAAGCCATATTCGAAGGAAGGGAAAAGGTTAGTTTCTTAGAGATCGGAAAAATGCTCGCCCGCCATTTTGTAAAGAACTGATGCAGGTGATGAGAGATCAACTTTCACTCCCCACCTTTTCAATCCATTTAGTTAGCAATTGTCTTGTTTAGCTCATATTTTTTTTAGGTAACATTGATGAACTTTCTTCCCGACGGTGCATTTGAAGGTCTTACTCCAATTGTGATGTCTGGTAAGTTTGTTGGGCATTTTGTAAAAAGGATAACCCCAAATTAGATATCTTCCATTTTCTTGACAAGTTGAAGCCTTTTTTTCCCTAATCAGATTGTACATTTTGTTTTGTATAGTGCTTCCTCTTATTTTATTTCACCTCCAAATCATATTGATGGATGAAATACAAGATGTCAATGAATTATTTTT GTAGAGTAGTAAAACAAAGCTTCTCAATAATATAGGAAAATATAAAGTTGGTTGATAAATATAAATGTACTTTAGGTGGGTGATCCGAAAAGCATTTAAGGAAGCAGTTCCCTCCCTTAGGGCAAGCAAACGGTCCAAAGGCAGTCCAAATTTCACGTTTGTAGTTTACAACGGAGCCCTTGGTTTTGCGGCGAGTTTTTCCCGATTCATCTCCTCCACTAAACCCTCCGCCGGAAACCGACTGCAAGAACCGAGCGAGTTACAATGTCTTCTGGATTCAACAATGGCTTAAGGGTTTTCAGAGCCTGTAGAACTCTCTTAGCTCCGTCCAAATCCTCTGCTACCGTTCCCGCCACCGCTCCCAAATCCAAGACGACCACGAAGCCGAAGACGAAGCTGCCCAAGGTGAAGACTCCTCCGAGCTCCGTTGCTGCTGCTGGTGTTGCAGCCACGCCCGAGCCGAAAATCAAAAAGGGAACGTCTCGACCGTCGGGGATTCTGAAGGTCACCCAGGTTTCTCCAGCGTTGAGCAACTTCTTGGGTGTATCGGAGGCTTCTCGCACCGACGCCGTCACGCAGATCTGGTCCTACATCAAGCTCCACAACCTTCAGAATCCTGATAACAAAAGAGAGATCTACTGCGACGATAAACTTAAAGCCATATTCGAAGGAAGGGAAAAGGTTAGTTTCTTAGAGATCGGAAAAATGCTCGCCCGCCATTTTGTAAAGAACTGATGCAGGTAACATTGATGAACTTTCTTCCCGACGGTGCATTTGAAGGTCTTACTCCAATTGTGATGTCTGGTAAGTTTGTTGGGCATTTTGTAAAAAGGATAACCCCAAATTAGATATCTTCCATTTTCTTGACAAGTTGAAGCCTTTTTTTCCCTAATCAGATTGTACATTTTGTTTTGTATAGTGCTTCCTCTTATTTTATTTCACCTCCAAATCATATTGATGGATGAAATACAAGATGTCAATGAATTATTTTT ATGTCTTCTGGATTCAACAATGGCTTAAGGGTTTTCAGAGCCTGTAGAACTCTCTTAGCTCCGTCCAAATCCTCTGCTACCGTTCCCGCCACCGCTCCCAAATCCAAGACGACCACGAAGCCGAAGACGAAGCTGCCCAAGGTGAAGACTCCTCCGAGCTCCGTTGCTGCTGCTGGTGTTGCAGCCACGCCCGAGCCGAAAATCAAAAAGGGAACGTCTCGACCGTCGGGGATTCTGAAGGTCACCCAGGTTTCTCCAGCGTTGAGCAACTTCTTGGGTGTATCGGAGGCTTCTCGCACCGACGCCGTCACGCAGATCTGGTCCTACATCAAGCTCCACAACCTTCAGAATCCTGATAACAAAAGAGAGATCTACTGCGACGATAAACTTAAAGCCATATTCGAAGGAAGGGAAAAGGTTAGTTTCTTAGAGATCGGAAAAATGCTCGCCCGCCATTTTGTAAAGAACTGA MSSGFNNGLRVFRACRTLLAPSKSSATVPATAPKSKTTTKPKTKLPKVKTPPSSVAAAGVAATPEPKIKKGTSRPSGILKVTQVSPALSNFLGVSEASRTDAVTQIWSYIKLHNLQNPDNKREIYCDDKLKAIFEGREKVSFLEIGKMLARHFVKN Homology
BLAST of Pay0011405 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Pay0011405 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11 Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of Pay0011405 vs. ExPASy Swiss-Prot
Match: Q9P7S3 (SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr3 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.9e-08 Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0
BLAST of Pay0011405 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.9e-08 Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 0
BLAST of Pay0011405 vs. ExPASy Swiss-Prot
Match: Q9FMT4 (SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14170 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.6e-05 Identity = 23/70 (32.86%), Postives = 39/70 (55.71%), Query Frame = 0
BLAST of Pay0011405 vs. ExPASy TrEMBL
Match: A0A1S3AVG6 (upstream activation factor subunit UAF30-like OS=Cucumis melo OX=3656 GN=LOC103483375 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Pay0011405 vs. ExPASy TrEMBL
Match: A0A0A0L3V0 (SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126840 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 6.1e-69 Identity = 146/158 (92.41%), Postives = 149/158 (94.30%), Query Frame = 0
BLAST of Pay0011405 vs. ExPASy TrEMBL
Match: A0A6J1IWB1 (protein TRI1-like OS=Cucurbita maxima OX=3661 GN=LOC111479808 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.5e-54 Identity = 120/156 (76.92%), Postives = 131/156 (83.97%), Query Frame = 0
BLAST of Pay0011405 vs. ExPASy TrEMBL
Match: A0A6J1D0R8 (upstream activation factor subunit spp27-like OS=Momordica charantia OX=3673 GN=LOC111015988 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.6e-53 Identity = 122/157 (77.71%), Postives = 132/157 (84.08%), Query Frame = 0
BLAST of Pay0011405 vs. ExPASy TrEMBL
Match: A0A6J1EDA2 (upstream activation factor subunit spp27-like OS=Cucurbita moschata OX=3662 GN=LOC111432134 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.6e-53 Identity = 118/156 (75.64%), Postives = 130/156 (83.33%), Query Frame = 0
BLAST of Pay0011405 vs. NCBI nr
Match: XP_008438197.1 (PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo] >XP_008438198.1 PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo]) HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Pay0011405 vs. NCBI nr
Match: XP_004133931.1 (upstream activation factor subunit spp27 [Cucumis sativus] >KGN56620.1 hypothetical protein Csa_011434 [Cucumis sativus]) HSP 1 Score: 270.0 bits (689), Expect = 1.3e-68 Identity = 146/158 (92.41%), Postives = 149/158 (94.30%), Query Frame = 0
BLAST of Pay0011405 vs. NCBI nr
Match: XP_038877222.1 (upstream activation factor subunit UAF30 [Benincasa hispida] >XP_038877226.1 upstream activation factor subunit UAF30 [Benincasa hispida]) HSP 1 Score: 234.6 bits (597), Expect = 5.9e-58 Identity = 128/156 (82.05%), Postives = 138/156 (88.46%), Query Frame = 0
BLAST of Pay0011405 vs. NCBI nr
Match: XP_022980440.1 (protein TRI1-like [Cucurbita maxima]) HSP 1 Score: 221.5 bits (563), Expect = 5.2e-54 Identity = 120/156 (76.92%), Postives = 131/156 (83.97%), Query Frame = 0
BLAST of Pay0011405 vs. NCBI nr
Match: XP_022924718.1 (upstream activation factor subunit spp27-like [Cucurbita moschata]) HSP 1 Score: 217.6 bits (553), Expect = 7.5e-53 Identity = 118/156 (75.64%), Postives = 130/156 (83.33%), Query Frame = 0
BLAST of Pay0011405 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29 Identity = 74/151 (49.01%), Postives = 95/151 (62.91%), Query Frame = 0
BLAST of Pay0011405 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23 Identity = 50/81 (61.73%), Postives = 64/81 (79.01%), Query Frame = 0
BLAST of Pay0011405 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 96.3 bits (238), Expect = 2.3e-20 Identity = 57/135 (42.22%), Postives = 82/135 (60.74%), Query Frame = 0
BLAST of Pay0011405 vs. TAIR 10
Match: AT1G31760.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20 Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = 0
BLAST of Pay0011405 vs. TAIR 10
Match: AT2G14880.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 89.4 bits (220), Expect = 2.9e-18 Identity = 56/139 (40.29%), Postives = 81/139 (58.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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