Pay0009459 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009459
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	conserved peptide upstream open reading frame 37
Location	chr07: 19833159 .. 19833464 (+)
RNA-Seq Expression	Pay0009459
Synteny	Pay0009459

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGGCATTGAAACACGAGAATGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAGTTGTCAGGTTTGTCAACTCAGTTCTTGCCTTGTGATTTTGCTCGTTGATTCACAACCGGATTAGTTACACATTTATTTTGTTGGAATTGTTTTGTATTTTTTTCCCCTGGAAGTTGCCATGATGAAACTTTTGGCATTTTTTCTGTTCCAGGCTGAGTATTTTCGGCAATTGCTTAAGCCAGTCACGTAG

mRNA sequence

ATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGGCATTGAAACACGAGAATGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAGTTGTCAGGCTGAGTATTTTCGGCAATTGCTTAAGCCAGTCACGTAG

Coding sequence (CDS)

ATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGGCATTGAAACACGAGAATGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAGTTGTCAGGCTGAGTATTTTCGGCAATTGCTTAAGCCAGTCACGTAG

Protein sequence

MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT

Homology

[Close]

BLAST of Pay0009459 vs. ExPASy TrEMBL
Match: A0A1S4E402 (uncharacterized protein LOC103501164 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501164 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.3e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 53

[Close]

BLAST of Pay0009459 vs. ExPASy TrEMBL
Match: A0A0A0KVT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G113180 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-21
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQA+YFRQLLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAKYFRQLLKPVT 53

[Close]

BLAST of Pay0009459 vs. ExPASy TrEMBL
Match: W9R7U4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011398 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQAA+QTRFRALKHENGIAGKPTIIVRVIACFQPLQ CQAEYFR LLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0009459 vs. ExPASy TrEMBL
Match: A0A0A0K458 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066260 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.0e-20
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQAA+QTRFRALKHENGIAGKPTIIV+VIACFQPLQ+CQAEYFR LLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0009459 vs. ExPASy TrEMBL
Match: A0A1S4E0J3 (uncharacterized protein LOC103495379 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495379 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.0e-20
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQAA+QTRFRALKHENGIAGKPTIIV+VIACFQPLQ+CQAEYFR LLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0009459 vs. NCBI nr
Match: XP_016902954.1 (PREDICTED: uncharacterized protein LOC103501164 isoform X2 [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 1.5e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 53

[Close]

BLAST of Pay0009459 vs. NCBI nr
Match: KAG7014898.1 (hypothetical protein SDJN02_22529 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110.9 bits (276), Expect = 3.3e-21
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFRQLLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT 53

[Close]

BLAST of Pay0009459 vs. NCBI nr
Match: KAG7030896.1 (hypothetical protein SDJN02_04933, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.5 bits (267), Expect = 3.7e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1   MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
           MVCQAATQTRFR LKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFR LLKPVT
Sbjct: 87  MVCQAATQTRFRTLKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 139

[Close]

BLAST of Pay0009459 vs. NCBI nr
Match: KAG6576874.1 (Transcription factor basic helix-loop-helix 143, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.5 bits (267), Expect = 3.7e-20
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKP 52
          MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFRQLLKP
Sbjct: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKP 51

[Close]

BLAST of Pay0009459 vs. NCBI nr
Match: EXB57311.1 (hypothetical protein L484_011398 [Morus notabilis])

HSP 1 Score: 107.1 bits (266), Expect = 4.8e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQAA+QTRFRALKHENGIAGKPTIIVRVIACFQPLQ CQAEYFR LLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0009459 vs. TAIR 10
Match: AT5G50011.1 (conserved peptide upstream open reading frame 37 )

HSP 1 Score: 89.7 bits (221), Expect = 7.4e-19
Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQ+A QTRFR LKHE+GI G   I+VRVIACFQPLQ CQAEYFRQLLKPVT
Sbjct: 1  MVCQSAGQTRFRTLKHEHGITG--NIVVRVIACFQPLQDCQAEYFRQLLKPVT 51

[Close]

BLAST of Pay0009459 vs. TAIR 10
Match: AT5G09461.1 (conserved peptide upstream open reading frame 43 )

HSP 1 Score: 80.1 bits (196), Expect = 5.9e-16
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHE-NGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MV Q+A QTRFR  K+E NG + +PTI+VRVIACFQP+ +CQAEYFR +LKPVT
Sbjct: 1  MVSQSAGQTRFRTFKYENNGDSSRPTIVVRVIACFQPMDNCQAEYFRHILKPVT 54

[Close]

BLAST of Pay0009459 vs. TAIR 10
Match: AT5G64341.1 (conserved peptide upstream open reading frame 40 )

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-15
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1  MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 54
          MVCQ+  +TRFR LK+E G A + TI+VRVI C+QP+ +CQAEYFR LLKPVT
Sbjct: 1  MVCQSPGKTRFRGLKYETGNANESTIVVRVIECYQPMDNCQAEYFRLLLKPVT 53

[Close]

BLAST of Pay0009459 vs. TAIR 10
Match: AT1G29951.1 (conserved peptide upstream open reading frame 35 )

HSP 1 Score: 40.4 bits (93), Expect = 5.2e-04
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 0


Query: 31 IACFQPLQSCQAEYFRQLLKPVT 54
          IA +Q +Q CQAEYFRQLLKPVT
Sbjct: 26 IANYQSVQVCQAEYFRQLLKPVT 48

The following BLAST results are available for this feature:

BLAST of Pay0009459 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0009459 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E402	7.3e-22	100.00	uncharacterized protein LOC103501164 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KVT2	4.7e-21	96.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G113180 PE=4 SV=1	[more]
W9R7U4	2.3e-20	94.34	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011398 PE=4 SV=1	[more]
A0A0A0K458	4.0e-20	92.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066260 PE=4 SV=1	[more]
A0A1S4E0J3	4.0e-20	92.45	uncharacterized protein LOC103495379 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Pay0009459 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902954.1	1.5e-21	100.00	PREDICTED: uncharacterized protein LOC103501164 isoform X2 [Cucumis melo]	[more]
KAG7014898.1	3.3e-21	98.11	hypothetical protein SDJN02_22529 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG7030896.1	3.7e-20	94.34	hypothetical protein SDJN02_04933, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6576874.1	3.7e-20	98.04	Transcription factor basic helix-loop-helix 143, partial [Cucurbita argyrosperma...	[more]
EXB57311.1	4.8e-20	94.34	hypothetical protein L484_011398 [Morus notabilis]	[more]

BLAST of Pay0009459 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50011.1	7.4e-19	81.13	conserved peptide upstream open reading frame 37	[more]
AT5G09461.1	5.9e-16	68.52	conserved peptide upstream open reading frame 43	[more]
AT5G64341.1	1.3e-15	66.04	conserved peptide upstream open reading frame 40	[more]
AT1G29951.1	5.2e-04	78.26	conserved peptide upstream open reading frame 35	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35281:SF4	SUBFAMILY NOT NAMED	coord: 1..53
None	No IPR available	PANTHER	PTHR35281	BNAA02G34170D PROTEIN	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009459.1	Pay0009459.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity