Pay0009290 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAAAAAAAAGAATTCACATCTAAACCAAACCGTATAAGCCTTCTTCGTTGCCCTAATTGAAGTTCCATTCCCGTAGCTGGCGACTGTGAGGGCGTGAGCTGCTGCGACTTCCGAGTGAACTCAGACAGAGTTAGGTCTTCCAATTTCCTTTCTTGAGATATCTATTTGCTTGAATCGCCATGGCGAGCACCAAAGTTCAGAGGATTATGACCCAACCTATAGTACTTTCTCATCTCAACTTATTTTGCTTCATTTCATCCTTCCTTTCCCCTTTTCTCTTACGTGTTTCACTTATGCATTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTATTGGATGTTGGTGCACCTTCAGAACTTGATTTTCAGGTTTCTTCAAAGTGTAAGTTCCTTTTCATGATCATTTACTTTATTTTCCATTTTGGGTATCGACGATTTGTTGTTGTTGTTGTTGTTTTTTTTTTCTTAAATAGTGAAATTGGTGTGTTCTTCCTCTGATGTTACTTACTTTTGTCTTCACGTTGGAAATTTGTGCAGAAAGCTCGAATTCAAATATGGCTTTTTGAGCAAAAAGACCTGAGGATTGAAGGCCGAATTATTGTAAGTTCTTTAGACTTGTGGGCTTTTTCTTCGAGAAAATCATCGTGCAAATATCTAGTTTATCTATTCTTAATGTACATTTGAATGTTAAAAAAGCTTACTAGGATTTTAAGTTTCCAAATATTGATTGTACGTCTGGGGTTTTAAGTTATTTTTTTCGAACTGAGGTGCATAGTTATGCTTTTACTGTTTTCCCACTCAAAAGAGATCATTCCAACATGGATGCAAAAGGAAGATAGTTTAATCCTGTTTGGTAATCATTTGATTTTTTGTTTTTTGGTTTTTGAAAATTAAACTTATAAACCCTACTTTGGTCGTTGGAAATTCTGGGGCATTCTCTGCTCATTTGACCTTCCATAAACTTACCAGTTACCTGAACTAGTCATAAGCTTAAAACCCTGCAGATGAAGTTGATATGATTATATGAAAGTTTTATATTCCAAAGAAGATAAAAGTCTTCCTCTGGAGTCTCACGCATAATAATCTAAATGCTTACAGAATCTTAGAAAGCATTGCTTGTCTCCATCGGTGTGCTTGCTCTGCCTCAAAGGATAGGAATCCAGTAACCACTTATTCCTATTTTTAGCTTCGCTAGAAGGGGTTGGTAGCAACTTTTTAAACTTTTGGTCTAAAACTTTGTATTCTTGAGGAGTAAGTAGTTGGTTTTTAGATGCTCTTTAAGGGTGGCCCTTTGAATGTAAAGCTGAAATCCTATGGGGTTGTACAACTCAAGTTCTTTTATGAGAGCTGTGGAAAGAATTATTTGAACAACGTGTGAAGATAAGTCCTGCTCCTTTGTTGATTTTTGTAACCTTGTACAACTTAATTTTTCTTTGTGGACTCATATGTGGATCCTCGAAGATGTGACTTTATTGTTATTCTTTTTTTTTTTTTTTTGTGATTAATACCTAGTTCTGTATCTTATAGAAAAAGCCAAGATATGAGAGCACATAAATATCTTCTTCCCTTAGTTGATTTGTTTTGGTTACACAGCCCAGATCAACTTGCATTGCAGAAAAAGAGAATCAATTTGTTTGTTTCCTTAATATAGTTGTCCAACATCTAGGTTGGTGGCTATCATTTTTGAAGCCATGGATGCTCAAGCTATTTTTGGAGAAATATTTGGTTCATGAAGGTTAGTAGTAGTTGTACTGCAAGGGATAAAGGATTTGTGTGTCTAGGATCCTGACCTTCTGGACGGCGTCTCCTATAGCTCATTTTTCCATTTGTTGCATCCCCCGCCGTTCAGTGAGTTTATGTTCTTTAACATCTGAAAATTTAAGATTCCTAAGAAAGTAAGGTTCTTTATTTGGCAAGTTGTATATGAATGTGTGAACACATTGGACCGACGCTTGAGCGCGATTCCTTTGCTAGTGGGCCATTTTGCTATATTCTTTGTTGGAAGGCAGAGGAAGATTTGAATCTCATTCTTTGGAGGTGTGAGTTTGTGTTTGCAGTTTGGGACTTGTTTTTCTAGACTTCTGTCTTGATGCTTGCCTGTCCTAGGGGCACTAGAGATATGTTCAGGAAGTTCTTCCACTAATTTAATGCCTCAAGATCTCTTCCATTATTCCACGCCTTTTTGGTGTTCCTTTCCAGGAATGAAATACCATAATCTTTGGTAAAATCTCTTCTAATATTGACATCATCTACAGTACCAAAACATTATTATTGCTGTTATTATTTTGGTAAGAGATTGTGCTTTCATGGAGAGAAATGAAAGAATATACGAGGACACACATAAAAAAAAACCCTAACAAAAAAGGGACTCTAATTGAAAAGAACAAGATTAAACTCATAATTATGAAAATGACTTACGACTTGGTCGTTCTGATGCCCATGGGCTATAATTGTTAGTTGAGGCACCAATTGGAAGTTGGTGTAGTGGATTATTGTAGACCACTCCATGTTTGGTGCACCAACTATAATAATGGTGTGGACAACTATATGCAACCTGTAATTAACTACAGTAAATACTATTTTAAAACCCTTTTCGCTACTATATTTTACTATTTTGTTACATTATTTGATATTTTTCACTCATATGCTCTTTTCTTCTTTGGTACAGTGTTTACTATTTCCTACCTGAACAAAAATATTCTACACCCCAAACAAACTACTATAACTCAAAGTAGTCAGAACCCCAAACGCCAACTATTATAACTCCCTAACTATTGATAACCACCAACTATAATGACCAACTTAGGACTCTAAATGCTCCCCAAGTTTTTTTAATTTGAGGGTTTCTATAAGTTTGTGATGTGTCTTCTGAACATTATTAATTTTCTGGTGACGACTTCTGAGTTTTACTTCCCAGGGATTTGACGAATATATGAATTTGGTTTTGGATGATGCTGAGGAAGTCAATGTAAAGAAGAAGAGCAGGAAAACTTTGGGTTTGTCTCTTCATCATTTCCTCTCGAAGTCAACACTTAAAATAGTTTAAGGGCAGATTAAAAACTCGTCTTATCTTTAACTTTTTCAGGGAGGATATTGCTTAAAGGGGATAACATAACTCTGATGATGAACTCGTAAGTCCTTTGGAAGCTCTCTCTTTCAAAATTCATCAATACTGATGCATAATTGCTCTTTCTAAAAAAATTCATGAATTGTAAACGAATGCAAAATTGCAGGGGCAAGTGATGACCATTTTTGAACCAATACAAGAGATAGTGAAGTGTAGCCCTTTTCAGTGGTGGAACTTGGAAGTCTTGTGTTGATCATAACATAGATTGTTATTTTTACTGTCAATTGGTTGACTGTTTTTGTACTTGCCTTAAAAAGAAATTAGAATGTCAGCTTATATGAGAGATAGTCATGGCACTCAACTCATCCAGCACTAATGTTGCTTAGATCATTGTATTTATTTTGCATATATCCTCAACCTTATGATACATGCTAGATATTTGCTGAGCTATGGTGGATTAATTGGACAACAAGAAGAAATTGGCTATTTTTATTTTATTTTATTTTAATTTTTAATTTTAAATCTTTATAAGC AAAAAAAAAAAAAAAAAAAAAAAGAATTCACATCTAAACCAAACCGTATAAGCCTTCTTCGTTGCCCTAATTGAAGTTCCATTCCCGTAGCTGGCGACTGTGAGGGCGTGAGCTGCTGCGACTTCCGAGTGAACTCAGACAGAGTTAGGTCTTCCAATTTCCTTTCTTGAGATATCTATTTGCTTGAATCGCCATGGCGAGCACCAAAGTTCAGAGGATTATGACCCAACCTATAAACTTGATTTTCAGGTTTCTTCAAAGTAAAGCTCGAATTCAAATATGGCTTTTTGAGCAAAAAGACCTGAGGATTGAAGGCCGAATTATTGGATTTGACGAATATATGAATTTGGTTTTGGATGATGCTGAGGAAGTCAATGTAAAGAAGAAGAGCAGGAAAACTTTGGGGAGGATATTGCTTAAAGGGGATAACATAACTCTGATGATGAACTCGGGCAAGTGATGACCATTTTTGAACCAATACAAGAGATAGTGAAGTGTAGCCCTTTTCAGTGGTGGAACTTGGAAGTCTTGTGTTGATCATAACATAGATTGTTATTTTTACTGTCAATTGGTTGACTGTTTTTGTACTTGCCTTAAAAAGAAATTAGAATGTCAGCTTATATGAGAGATAGTCATGGCACTCAACTCATCCAGCACTAATGTTGCTTAGATCATTGTATTTATTTTGCATATATCCTCAACCTTATGATACATGCTAGATATTTGCTGAGCTATGGTGGATTAATTGGACAACAAGAAGAAATTGGCTATTTTTATTTTATTTTATTTTAATTTTTAATTTTAAATCTTTATAAGC ATGGCGAGCACCAAAGTTCAGAGGATTATGACCCAACCTATAAACTTGATTTTCAGGTTTCTTCAAAGTAAAGCTCGAATTCAAATATGGCTTTTTGAGCAAAAAGACCTGAGGATTGAAGGCCGAATTATTGGATTTGACGAATATATGAATTTGGTTTTGGATGATGCTGAGGAAGTCAATGTAAAGAAGAAGAGCAGGAAAACTTTGGGGAGGATATTGCTTAAAGGGGATAACATAACTCTGATGATGAACTCGGGCAAGTGA MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVKKKSRKTLGRILLKGDNITLMMNSGK Homology
BLAST of Pay0009290 vs. ExPASy Swiss-Prot
Match: A4FUI2 (Small nuclear ribonucleoprotein E OS=Bos taurus OX=9913 GN=SNRPE PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-28 Identity = 59/81 (72.84%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of Pay0009290 vs. ExPASy Swiss-Prot
Match: P62303 (Small nuclear ribonucleoprotein E OS=Gallus gallus OX=9031 GN=SNRPE PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-28 Identity = 59/81 (72.84%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of Pay0009290 vs. ExPASy Swiss-Prot
Match: P62304 (Small nuclear ribonucleoprotein E OS=Homo sapiens OX=9606 GN=SNRPE PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-28 Identity = 59/81 (72.84%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of Pay0009290 vs. ExPASy Swiss-Prot
Match: P62305 (Small nuclear ribonucleoprotein E OS=Mus musculus OX=10090 GN=Snrpe PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-28 Identity = 59/81 (72.84%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of Pay0009290 vs. ExPASy Swiss-Prot
Match: A1XQR9 (Small nuclear ribonucleoprotein E OS=Sus scrofa OX=9823 GN=SNRPE PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-28 Identity = 59/81 (72.84%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of Pay0009290 vs. ExPASy TrEMBL
Match: A0A0A0K3R1 (Small nuclear ribonucleoprotein E OS=Cucumis sativus OX=3659 GN=Csa_7G206940 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 9.8e-40 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. ExPASy TrEMBL
Match: A0A1S3BIS5 (Small nuclear ribonucleoprotein E OS=Cucumis melo OX=3656 GN=LOC103490154 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 9.8e-40 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. ExPASy TrEMBL
Match: A0A6J1DT21 (Small nuclear ribonucleoprotein E OS=Momordica charantia OX=3673 GN=LOC111023239 PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.2e-39 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. ExPASy TrEMBL
Match: A0A1U8JTM2 (Small nuclear ribonucleoprotein E OS=Gossypium hirsutum OX=3635 GN=LOC107909182 PE=3 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.9e-39 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. ExPASy TrEMBL
Match: A0A5D2FR92 (Small nuclear ribonucleoprotein E OS=Gossypium darwinii OX=34276 GN=ES288_A08G279400v1 PE=3 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.9e-39 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. NCBI nr
Match: XP_004139778.1 (small nuclear ribonucleoprotein E [Cucumis sativus] >XP_008447758.1 PREDICTED: small nuclear ribonucleoprotein E-like [Cucumis melo] >XP_038896948.1 small nuclear ribonucleoprotein E-like [Benincasa hispida]) HSP 1 Score: 172.2 bits (435), Expect = 2.0e-39 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. NCBI nr
Match: XP_039006230.1 (small nuclear ribonucleoprotein E-like [Hibiscus syriacus] >XP_039014446.1 small nuclear ribonucleoprotein E-like [Hibiscus syriacus] >XP_039018264.1 small nuclear ribonucleoprotein E-like [Hibiscus syriacus] >XP_039036978.1 small nuclear ribonucleoprotein E-like [Hibiscus syriacus] >XP_039036979.1 small nuclear ribonucleoprotein E-like [Hibiscus syriacus]) HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. NCBI nr
Match: XP_022156313.1 (small nuclear ribonucleoprotein E-like [Momordica charantia] >XP_022156314.1 small nuclear ribonucleoprotein E-like [Momordica charantia]) HSP 1 Score: 171.0 bits (432), Expect = 4.5e-39 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. NCBI nr
Match: XP_002531748.2 (small nuclear ribonucleoprotein E [Ricinus communis]) HSP 1 Score: 171.0 bits (432), Expect = 4.5e-39 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. NCBI nr
Match: XP_012477072.1 (PREDICTED: small nuclear ribonucleoprotein E-like [Gossypium raimondii] >XP_016692123.1 small nuclear ribonucleoprotein E [Gossypium hirsutum] >XP_016714938.1 small nuclear ribonucleoprotein E [Gossypium hirsutum] >XP_017624010.1 PREDICTED: small nuclear ribonucleoprotein E-like [Gossypium arboreum] >XP_023910548.1 small nuclear ribonucleoprotein E-like [Quercus suber] >XP_023910556.1 small nuclear ribonucleoprotein E-like [Quercus suber] >XP_030955059.1 small nuclear ribonucleoprotein E-like [Quercus lobata] >KAB2019199.1 hypothetical protein ES319_D08G281600v1 [Gossypium barbadense] >KAF3957351.1 hypothetical protein CMV_017624 [Castanea mollissima] >TYG59331.1 hypothetical protein ES288_D08G293700v1 [Gossypium darwinii] >TYH60443.1 hypothetical protein ES332_D08G292600v1 [Gossypium tomentosum] >TYI71292.1 hypothetical protein E1A91_D08G284400v1 [Gossypium mustelinum]) HSP 1 Score: 170.6 bits (431), Expect = 5.9e-39 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Pay0009290 vs. TAIR 10
Match: AT4G30330.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 161.8 bits (408), Expect = 2.6e-40 Identity = 81/88 (92.05%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of Pay0009290 vs. TAIR 10
Match: AT2G18740.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 159.8 bits (403), Expect = 9.7e-40 Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Pay0009290 vs. TAIR 10
Match: AT2G18740.2 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 129.0 bits (323), Expect = 1.8e-30 Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of Pay0009290 vs. TAIR 10
Match: AT5G48870.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 48.1 bits (113), Expect = 4.1e-06 Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of Pay0009290 vs. TAIR 10
Match: AT4G20440.1 (small nuclear ribonucleoprotein associated protein B ) HSP 1 Score: 44.3 bits (103), Expect = 6.0e-05 Identity = 25/82 (30.49%), Postives = 44/82 (53.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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