Pay0009229 (gene) Melon (Payzawat) v1

Overview
NamePay0009229
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRRM domain-containing protein
Locationchr09: 23672747 .. 23676354 (-)
RNA-Seq ExpressionPay0009229
SyntenyPay0009229
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAGTTCCAATATTGTTGGGTGGGACGACGACGCTTACGAGTGTCGATACTGAACTCGGCGATCTTCTTCTTCGTACAAATCGTAAACCCATCTTCCCAATCTGCGTTCTATTCTTTGATCTGTAACTTTGTAAGTATTTTCTTCTTCACTGTACACAGCCATCGCACCATTCCATTTTTCTTCTTTCTCTAATCTCCACCCTCTAGGGTTTTTAGCCACCCCTTTTCATGGTAGTCGAGATGTTTGGCGTATTCATTGTTTCGTATCAAGAATCGTTCTTGATCTTTAGTTGTTGTGTCACAAGGTCAGCTCGTTTGATCGGTTAGTCGTTGTTTAGTTCTTGCTTTGATTTGTTGGGATCATTAAATTTATTAGAATCTTTCTCAGCTGTGGCGAAGGTGAACAGAAAATTTTCAACTATTTTAAATTAATACCATTACATGTTGAAAGAACGTGGCTTTTGTATATTGATGGACGAGAGTTGAGAATGTGCGCATACTTCGAAAAGTAGATTGAGTTGGAGGAAGAGATTATAGGTTTAGACTGTACAAAGTGTTAGTTAAATTCTTGATTGTTTTGAAATGTTAGGTGTGATCCAAATTTATGTGACTTAGTTCAGACTAAATGTTTGCTCCCAACTCGTCTTATCTATGCTTGGGTTTTTGCAACTTATTTCTAGAATATGTGTCTGGTGTTTTGTATTGTATCTGTTGTTGGTTCGGTAGTTAAGTATTTTTGTGTGAATTTGGGTGTTTCCAAATAAGTAATGCTTTCTAATTTGTTATTTTAATATGTACAAATTTATGCAGATATGCGTGGAGTCCAGAAAATTTCTTCTACTCTGTGGAACTGAAACTTACAAATTTTCTATCTTATGTTATGGTATATTCCTGACCCTTTTCTTTTTTATGCCTTTACTACCTCATTCTGATAAAAACTCAGTTAAAATTGGGGCCCTTCACCCTGTTTTCTATAGCATACATGTTGTTTGAACCACCACTCTTTTACTCTCCTTATTTATTATTTTTTTTTTATAACAACCTCTCCCCCCATTGGAGATTGGTGGAAAACTTTGGTGTCTCATGGCTGGCCACATCACTTATTCGTGCTAAAGTTGAAAGCCCTCAGGGAGAAGTTGGATGTTTGAACAGATGGGATATTTGACAATTTTTTGTCGAAATGAAAGAACTAAAAGACAAACTAGTGTCCCTGGATTCTCTAGAGGGAAGTGGTAAATTGGGTGAGGGGAGAATTAACTAAGATTCAACATGATAACAGTCTTCTTGTTTTGACAATAAAGGGGGAAAGATTTTGTAGAGATGCCAACAATAATGGCTCTCAGACAGGGAGATGAAAATTTTGGGTGTTCCTTCAAAGTTAAGGCTGTTAGTTTGGTAGAGAAAGAAGGAGAAACTGAGGTATTCAATTTTGACGAGAGGGATTTAATCACCAAGTAAGGGGGTAGATCTTGAATTCTTTTTCAACCTTTTCCAATAACTTGAGAGTGGGGAAAAATTCTTACCTAGTGCTAGAATCTCCTTTTAAGTAAAACTTCATAGAGGGAGATATGAGTAGTTTCTCCTCCTCCTGTAGTTTCAAAGTCCTGGGCACTTTTATGCCTTTGAATCTGAAGTCTTGGAACATCATCAAAGATAATTTTGTGGTTTCTTCTCAAGATTTTTCCCTAGACTAGAATCGCTCAAACGTTTGCATTAACGGAATCCCTACCCTTCATTCCAAAAAGAGCATTGCTCTGGTGGTCAAGTACGTTAGTGAAACCATCCTAAGAAGAACTGTCTTCTGGTTGGTAATTTGTTTCTGCTTTCTTATTTTTAGATTCTTTGACCACTAAATCTTGTGGGCTGCTCCATCAGCATCTCCCCTACCTCACTCACATTATTCTATGCTGCAACCGTAGCATAATGGTAATATTTTGTAAGAACCTTTTAGTTCTACGTTCATTTATTGATCCTTAGTGTGCTTAGTCTAGTCATATTTTGTTTCCACTTGTGAACTCTGTATTAGTGTTAAGGTTCAAAAATCAGTCTAATTTAATGTGGCAACGACTCAATCACTCAACGCAGATTCTGGATTTCTCGAGTATATTCTTTAAGTCTAAAGCCTATATAATTGAGAACTGTTTTGCTTCTCATGTGATGGTACTTAAATTTAAGTGGAGCTTCTGTAGACATTTTCTCCCTTCTTCTGGTTGGGATGATGTAACGCTACTTTTGATCTTATGGAATTACCGCCTCAGGATTCAAACGGTTTTGTTGATGAGAAGTGTGAAAGCAAACTTTATATTGGCAATCTTGACCTCAGAATTACGGAGTAAGGAAAACTACTGTCCCAGCATTTGCAATGTATTTGTCTTCTAGTTTTCCCGCTTCTATACTAAAGTTTGAATCAATTTGTTTCAGAGCGGCCCTCATTAAACTCTTCTCTCCTTTTGGGAAGATAATATCTGAGGATTTCTTGTGGCACACCCGTGGGCCGAAGCGTGGAGAGCCACGAGGATTTGCCTTCATCGAGTACAGCTCCAAGGAGGTAAGTTGCTTGGTGTTTACCCCTTGATAGCCTCTGTCAAGCAATTACTTATTTTTGCTTGTAAAGTGAGTATGCAGGAAGCTAAATTGGCTAAAGAGAAGATGCATGGGAAATTAGCTTGCGGTCGTCCGTTGGTCGTCCGCCTCGCTAGTGAAAAGCTCATGGTGAACACAGCAAATGATACTTCAAAAGCAGCAAGCGAGTCAAGAAAATCAAGACTCGGTGGCAGCAGTTATGGACAGTTGACTCGCAGCGATAAGATTGCTGCCATAAAGAATAAATTGAGAGCTTTGGAAGGAGGTGGGGAGAGCTCTAGTGTGAAAAAACCGAAGCAAGATAATATCAGTTTCAAGGATCATATTGATAAGTCATTTCTCAAGACATCTTGATGTTGAAGAAAACTGAGATTGGTAGCTTGTATTTACCCAAATGTCTTCTACAATTATCAAACCTCTATAGGCAAATCTGATGCATAGTGTTAAAGTTTAAATATGATGCTGACATATAACATAGCCTGATATTCTGCGACAACAACTGGTGGGAAATTGAACTCGTGCAGTCGAATAAAAGAGAAATTGCAAAAAATATTTAAATTTGTATGCAGATTTTCCGAAGACAATGACATAGATCTTTTAATCACATACATCTAGTTATTAAAAGATAACTCTACTGTGGCGTCTAGTTACTCATGTTTATTTTTAAACTTTTAATTAGTCATCACGGGGACGATTTTACCTTTTTTTTTTTTTATTATTTTTTTTTAATTTTTAGTCTCATTTCAGCGTTATTATTTAGTTGAGAGAGTTATTCCTCTAAAAATATTTAAATGGATGTAACTTTCAAATTTTAATATGCAACTATTTTTTTTTATTATTTTTAGTTTTTAAAATTAAGTTTATAAATATATTGCTCACTTCTTAATTTCTTCTTTAGTTATTCATTTTTTAATAATGGTTTAAAAAATTATGTTTAATTTTGAATACTTTCATAAACTTTGTTTTGTTTTCTGAATTTGGTTAAGGGTTAGAATTCTTTTACTAAAAAAATAGTAAAGAATTT

mRNA sequence

CAAAGTTCCAATATTGTTGGGTGGGACGACGACGCTTACGAGTGTCGATACTGAACTCGGCGATCTTCTTCTTCGTACAAATCGTAAACCCATCTTCCCAATCTGCGTTCTATTCTTTGATCTGTAACTTTATATGCGTGGAGTCCAGAAAATTTCTTCTACTCTGTGGAACTGAAACTTACAAATTTTCTATCTTATGTTATGGTATATTCCTGACCCTTTTCTTTTTTATGCCTTTACTACCTCATTCTGATAAAAACTCAGTTAAAATTGGGGCCCTTCACCCTGTTTTCTATAGCATACATGTTGTTTGAACCACCACTCTTTTACTCTCCTTATTTATTATTTTTTTTTTATAACAACCTCTCCCCCCATTGGAGATTGGTGGAAAACTTTGGTGTCTCATGGCTGGCCACATCACTTATTCGTGCTAAAGTTGAAAGCCCTCAGGGAGAAGTTGGATGTTTGAACAGATGGGATATTTGACAATTTTTTGTCGAAATGAAAGAACTAAAAGACAAACTAGTGTCCCTGGATTCTCTAGAGGGAAGTGGTAAATTGGGTGAGGGGAGAATTAACTAAGATTCAACATGATAACAGTCTTCTTGTTTTGACAATAAAGGGGGAAAGATTTTGTAGAGATGCCAACAATAATGGCTCTCAGACAGGGAGATGAAAATTTTGGGTGTTCCTTCAAAGTTAAGGCTGTTAGTTTGGTAGAGAAAGAAGGAGAAACTGAGGTATTCAATTTTGACGAGAGGGATTTAATCACCAAGTAAGGGGGTAGATCTTGAATTCTTTTTCAACCTTTTCCAATAACTTGAGAGTGGGGAAAAATTCTTACCTAGTGCTAGAATCTCCTTTTAAGTAAAACTTCATAGAGGGAGATATGAGTAGTTTCTCCTCCTCCTGTAGTTTCAAAGTCCTGGGCACTTTTATGCCTTTGAATCTGAAGTCTTGGAACATCATCAAAGATAATTTTGTGGTTTCTTCTCAAGATTTTTCCCTAGACTAGAATCGCTCAAACGTTTGCATTAACGGAATCCCTACCCTTCATTCCAAAAAGAGCATTGCTCTGGTGGTCAAGTACGTTAGTGAAACCATCCTAAGAAGAACTGTCTTCTGGTTGGTAATTTGTTTCTGCTTTCTTATTTTTAGATTCTTTGACCACTAAATCTTGTGGGCTGCTCCATCAGCATCTCCCCTACCTCACTCACATTATTCTATGCTGCAACCGTAGCATAATGGTAATATTTTGTAAGAACCTTTTAGTTCTACGTTCATTTATTGATCCTTAGTGTGCTTAGTCTAGTCATATTTTGTTTCCACTTGTGAACTCTGTATTAGTGTTAAGGTTCAAAAATCAGTCTAATTTAATGTGGCAACGACTCAATCACTCAACGCAGATTCTGGATTTCTCGAGTATATTCTTTAAGTCTAAAGCCTATATAATTGAGAACTGTTTTGCTTCTCATGTGATGGTACTTAAATTTAAGTGGAGCTTCTGTAGACATTTTCTCCCTTCTTCTGGTTGGGATGATGTAACGCTACTTTTGATCTTATGGAATTACCGCCTCAGGATTCAAACGGTTTTGTTGATGAGAAGTGTGAAAGCAAACTTTATATTGGCAATCTTGACCTCAGAATTACGGAAGCGGCCCTCATTAAACTCTTCTCTCCTTTTGGGAAGATAATATCTGAGGATTTCTTGTGGCACACCCGTGGGCCGAAGCGTGGAGAGCCACGAGGATTTGCCTTCATCGAGTACAGCTCCAAGGAGGAAGCTAAATTGGCTAAAGAGAAGATGCATGGGAAATTAGCTTGCGGTCGTCCGTTGGTCGTCCGCCTCGCTAGTGAAAAGCTCATGGTGAACACAGCAAATGATACTTCAAAAGCAGCAAGCGAGTCAAGAAAATCAAGACTCGGTGGCAGCAGTTATGGACAGTTGACTCGCAGCGATAAGATTGCTGCCATAAAGAATAAATTGAGAGCTTTGGAAGGAGGTGGGGAGAGCTCTAGTGTGAAAAAACCGAAGCAAGATAATATCAGTTTCAAGGATCATATTGATAAGTCATTTCTCAAGACATCTTGATGTTGAAGAAAACTGAGATTGGTAGCTTGTATTTACCCAAATGTCTTCTACAATTATCAAACCTCTATAGGCAAATCTGATGCATAGTGTTAAAGTTTAAATATGATGCTGACATATAACATAGCCTGATATTCTGCGACAACAACTGGTGGGAAATTGAACTCGTGCAGTCGAATAAAAGAGAAATTGCAAAAAATATTTAAATTTGTATGCAGATTTTCCGAAGACAATGACATAGATCTTTTAATCACATACATCTAGTTATTAAAAGATAACTCTACTGTGGCGTCTAGTTACTCATGTTTATTTTTAAACTTTTAATTAGTCATCACGGGGACGATTTTACCTTTTTTTTTTTTTATTATTTTTTTTTAATTTTTAGTCTCATTTCAGCGTTATTATTTAGTTGAGAGAGTTATTCCTCTAAAAATATTTAAATGGATGTAACTTTCAAATTTTAATATGCAACTATTTTTTTTTATTATTTTTAGTTTTTAAAATTAAGTTTATAAATATATTGCTCACTTCTTAATTTCTTCTTTAGTTATTCATTTTTTAATAATGGTTTAAAAAATTATGTTTAATTTTGAATACTTTCATAAACTTTGTTTTGTTTTCTGAATTTGGTTAAGGGTTAGAATTCTTTTACTAAAAAAATAGTAAAGAATTT

Coding sequence (CDS)

ATGGAATTACCGCCTCAGGATTCAAACGGTTTTGTTGATGAGAAGTGTGAAAGCAAACTTTATATTGGCAATCTTGACCTCAGAATTACGGAAGCGGCCCTCATTAAACTCTTCTCTCCTTTTGGGAAGATAATATCTGAGGATTTCTTGTGGCACACCCGTGGGCCGAAGCGTGGAGAGCCACGAGGATTTGCCTTCATCGAGTACAGCTCCAAGGAGGAAGCTAAATTGGCTAAAGAGAAGATGCATGGGAAATTAGCTTGCGGTCGTCCGTTGGTCGTCCGCCTCGCTAGTGAAAAGCTCATGGTGAACACAGCAAATGATACTTCAAAAGCAGCAAGCGAGTCAAGAAAATCAAGACTCGGTGGCAGCAGTTATGGACAGTTGACTCGCAGCGATAAGATTGCTGCCATAAAGAATAAATTGAGAGCTTTGGAAGGAGGTGGGGAGAGCTCTAGTGTGAAAAAACCGAAGCAAGATAATATCAGTTTCAAGGATCATATTGATAAGTCATTTCTCAAGACATCTTGA

Protein sequence

MELPPQDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSYGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS
Homology
[Close]
BLAST of Pay0009229 vs. ExPASy Swiss-Prot
Match: Q6PBM8 (Probable RNA-binding protein 18 OS=Danio rerio OX=7955 GN=rbm18 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16
Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 0 

Query: 19  KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 78
           +L+IGN+D +ITE  L+KL   FGK+   DFL+H  GP  G+PRG+ F+ + +KEEA+ A
Sbjct: 24  RLWIGNIDPKITEYHLVKLLEKFGKVKQFDFLFHKSGPLEGQPRGYCFVNFHTKEEAERA 83

Query: 79  KEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSYGQLTRSDKIAAI 138
            + ++GKLA  + LVVR A  +       + +  AS    S         L+ + KI AI
Sbjct: 84  IQCLNGKLALSKKLVVRWAHAQRFEPFRGEKNMPASLEPSSSEAEDLPTSLSVNAKIRAI 143

Query: 139 KNKLRALE 147
           + KL+ +E
Sbjct: 144 EAKLQMME 151

[Close]
BLAST of Pay0009229 vs. ExPASy Swiss-Prot
Match: Q96H35 (Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=RBM18 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.2e-15
Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 0 

Query: 19  KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 78
           +L+IGNLD +ITE  L+KL   FGK+   DFL+H  G   G+PRG+ F+ + +K+EA+ A
Sbjct: 26  RLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85

Query: 79  KEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASES-RKSRLGGSSYGQLTRSDKIAA 138
            + ++GKLA  + LVVR A  ++     N   K    S   S     +   L+ + KI A
Sbjct: 86  IQCLNGKLALSKKLVVRWAHAQVKRYDHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKA 145

Query: 139 IKNKLRAL 146
           I+ KL+ +
Sbjct: 146 IEAKLKMM 153

[Close]
BLAST of Pay0009229 vs. ExPASy Swiss-Prot
Match: Q9CR83 (Probable RNA-binding protein 18 OS=Mus musculus OX=10090 GN=Rbm18 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.2e-15
Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 0 

Query: 19  KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 78
           +L+IGNLD +ITE  L+KL   FGK+   DFL+H  G   G+PRG+ F+ + +K+EA+ A
Sbjct: 26  RLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85

Query: 79  KEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASES-RKSRLGGSSYGQLTRSDKIAA 138
            + ++GKLA  + LVVR A  ++     N   K    S   S     +   L+ + KI A
Sbjct: 86  IQCLNGKLALSKKLVVRWAHAQVKRYDHNKNDKILPISLEPSSSTEPAQSNLSVTAKIKA 145

Query: 139 IKNKLRAL 146
           I+ KL+ +
Sbjct: 146 IEAKLKMM 153

[Close]
BLAST of Pay0009229 vs. ExPASy Swiss-Prot
Match: Q5R6W3 (Probable RNA-binding protein 18 OS=Pongo abelii OX=9601 GN=RBM18 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.2e-15
Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 0 

Query: 19  KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 78
           +L+IGNLD +ITE  L+KL   FGK+   DFL+H  G   G+PRG+ F+ + +K+EA+ A
Sbjct: 26  RLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85

Query: 79  KEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASES-RKSRLGGSSYGQLTRSDKIAA 138
            + ++GKLA  + LVVR A  ++     N   K    S   S     +   L+ + KI A
Sbjct: 86  IQCLNGKLALSKKLVVRWAHAQVKRYDHNKNDKILPISLEPSSSTEPTQSNLSVTAKIKA 145

Query: 139 IKNKLRAL 146
           I+ KL+ +
Sbjct: 146 IEAKLKMM 153

[Close]
BLAST of Pay0009229 vs. ExPASy Swiss-Prot
Match: Q3ZCC5 (Probable RNA-binding protein 18 OS=Bos taurus OX=9913 GN=RBM18 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.0e-14
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 0 

Query: 19  KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 78
           +L+IGNLD +ITE  L++L   FG +   DFL+H  G   G+PRG+ F+ + +K+EA+ A
Sbjct: 26  RLWIGNLDPKITEYHLLRLLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85

Query: 79  KEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASES-RKSRLGGSSYGQLTRSDKIAA 138
            + ++GKLA  + LVVR A  ++     N   K    S   S     +   L+ + KI A
Sbjct: 86  IQCLNGKLALSKKLVVRWAHAQVKRYDHNKNDKILPISLEPSSSTEPAQSNLSVTAKIKA 145

Query: 139 IKNKLRAL 146
           I+ KL+ +
Sbjct: 146 IEAKLKMM 153

[Close]
BLAST of Pay0009229 vs. ExPASy TrEMBL
Match: A0A5A7TLJ6 (Putative RNA-binding protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00930 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.9e-88
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 6   QDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA 65
           +DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA
Sbjct: 33  EDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA 92

Query: 66  FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSS 125
           FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSS
Sbjct: 93  FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSS 152

Query: 126 YGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 177
           YGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS
Sbjct: 153 YGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 203

[Close]
BLAST of Pay0009229 vs. ExPASy TrEMBL
Match: A0A1S3ATX2 (probable RNA-binding protein 18 OS=Cucumis melo OX=3656 GN=LOC103482914 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.7e-88
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 7   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 66
           DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF
Sbjct: 2   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 61

Query: 67  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY 126
           IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY
Sbjct: 62  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY 121

Query: 127 GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 177
           GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS
Sbjct: 122 GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 171

[Close]
BLAST of Pay0009229 vs. ExPASy TrEMBL
Match: A0A0A0KJM9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140500 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 162/171 (94.74%), Postives = 165/171 (96.49%), Query Frame = 0 

Query: 6   QDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA 65
           +DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA
Sbjct: 33  EDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA 92

Query: 66  FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSS 125
           FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLM NT NDTS+ ASESRKSRLGGSS
Sbjct: 93  FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMTNTTNDTSRTASESRKSRLGGSS 152

Query: 126 YGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 177
           YGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNIS+KDH DKS LK S
Sbjct: 153 YGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISYKDHNDKSSLKPS 203

[Close]
BLAST of Pay0009229 vs. ExPASy TrEMBL
Match: A0A6J1DXL8 (probable RNA-binding protein 18 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024416 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 146/173 (84.39%), Postives = 157/173 (90.75%), Query Frame = 0 

Query: 6   QDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA 65
           +DS+GFVDEKCESKLYIGNLDLRITEA LIK+FSPFGKIISEDFLWHTRGPKRGEPRGFA
Sbjct: 21  KDSSGFVDEKCESKLYIGNLDLRITEATLIKMFSPFGKIISEDFLWHTRGPKRGEPRGFA 80

Query: 66  FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSS 125
           FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEK M++T    S+AA ES KSRLGGS+
Sbjct: 81  FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKCMIDTTKSISRAAGESSKSRLGGSN 140

Query: 126 YGQLTRSDKIAAIKNKLRALEGGGESSS--VKKPKQDNISFKDHIDKSFLKTS 177
           YGQ+TR+DKIAAIKNKLRALEG  ESSS  VKK KQDNIS +D+IDK  LKTS
Sbjct: 141 YGQMTRTDKIAAIKNKLRALEGEAESSSSRVKKQKQDNISCRDNIDKP-LKTS 192

[Close]
BLAST of Pay0009229 vs. ExPASy TrEMBL
Match: A0A6J1DUC5 (probable RNA-binding protein 18 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024416 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.5e-71
Identity = 146/172 (84.88%), Postives = 156/172 (90.70%), Query Frame = 0 

Query: 7   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 66
           DS+GFVDEKCESKLYIGNLDLRITEA LIK+FSPFGKIISEDFLWHTRGPKRGEPRGFAF
Sbjct: 53  DSSGFVDEKCESKLYIGNLDLRITEATLIKMFSPFGKIISEDFLWHTRGPKRGEPRGFAF 112

Query: 67  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY 126
           IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEK M++T    S+AA ES KSRLGGS+Y
Sbjct: 113 IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKCMIDTTKSISRAAGESSKSRLGGSNY 172

Query: 127 GQLTRSDKIAAIKNKLRALEGGGESSS--VKKPKQDNISFKDHIDKSFLKTS 177
           GQ+TR+DKIAAIKNKLRALEG  ESSS  VKK KQDNIS +D+IDK  LKTS
Sbjct: 173 GQMTRTDKIAAIKNKLRALEGEAESSSSRVKKQKQDNISCRDNIDKP-LKTS 223

[Close]
BLAST of Pay0009229 vs. NCBI nr
Match: KAA0042597.1 (putative RNA-binding protein 18 [Cucumis melo var. makuwa])

HSP 1 Score: 334.0 bits (855), Expect = 8.1e-88
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 6   QDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA 65
           +DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA
Sbjct: 33  EDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA 92

Query: 66  FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSS 125
           FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSS
Sbjct: 93  FIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSS 152

Query: 126 YGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 177
           YGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS
Sbjct: 153 YGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 203

[Close]
BLAST of Pay0009229 vs. NCBI nr
Match: XP_008437528.1 (PREDICTED: probable RNA-binding protein 18 [Cucumis melo])

HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 7   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 66
           DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF
Sbjct: 2   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 61

Query: 67  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY 126
           IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY
Sbjct: 62  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY 121

Query: 127 GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 177
           GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS
Sbjct: 122 GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 171

[Close]
BLAST of Pay0009229 vs. NCBI nr
Match: XP_011654647.1 (probable RNA-binding protein 18 isoform X2 [Cucumis sativus] >KAE8647815.1 hypothetical protein Csa_000614 [Cucumis sativus])

HSP 1 Score: 318.2 bits (814), Expect = 4.6e-83
Identity = 162/170 (95.29%), Postives = 164/170 (96.47%), Query Frame = 0 

Query: 7   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 66
           DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF
Sbjct: 2   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 61

Query: 67  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY 126
           IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLM NT NDTS+ ASESRKSRLGGSSY
Sbjct: 62  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMTNTTNDTSRTASESRKSRLGGSSY 121

Query: 127 GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 177
           GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNIS+KDH DKS LK S
Sbjct: 122 GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISYKDHNDKSSLKPS 171

[Close]
BLAST of Pay0009229 vs. NCBI nr
Match: XP_031741097.1 (probable RNA-binding protein 18 isoform X1 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 6.8e-79
Identity = 162/195 (83.08%), Postives = 164/195 (84.10%), Query Frame = 0 

Query: 7   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 66
           DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF
Sbjct: 2   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 61

Query: 67  IEYSSKE-------------------------EAKLAKEKMHGKLACGRPLVVRLASEKL 126
           IEYSSKE                         EAKLAKEKMHGKLACGRPLVVRLASEKL
Sbjct: 62  IEYSSKEVSCLVYSLIASVKQLLIFACKVSMQEAKLAKEKMHGKLACGRPLVVRLASEKL 121

Query: 127 MVNTANDTSKAASESRKSRLGGSSYGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDN 177
           M NT NDTS+ ASESRKSRLGGSSYGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDN
Sbjct: 122 MTNTTNDTSRTASESRKSRLGGSSYGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDN 181

[Close]
BLAST of Pay0009229 vs. NCBI nr
Match: XP_038875193.1 (probable RNA-binding protein 18 [Benincasa hispida] >XP_038875194.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875195.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875196.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875197.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875198.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875199.1 probable RNA-binding protein 18 [Benincasa hispida])

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72
Identity = 142/156 (91.03%), Postives = 149/156 (95.51%), Query Frame = 0 

Query: 7   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 66
           DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSP+GKIISEDFLWHTRGPKRGEPRGFAF
Sbjct: 4   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPYGKIISEDFLWHTRGPKRGEPRGFAF 63

Query: 67  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY 126
           IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASE+ + NT NDTS+AA ES KSRLGGS+Y
Sbjct: 64  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASERFITNTTNDTSRAAGESSKSRLGGSNY 123

Query: 127 GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNI 163
            Q+TRSDKIAAIKNKLRALEGGGESSSVKK KQDN+
Sbjct: 124 RQMTRSDKIAAIKNKLRALEGGGESSSVKKQKQDNM 159

[Close]
BLAST of Pay0009229 vs. TAIR 10
Match: AT5G52545.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 82  MHGKLACGRPLVVRLASEKLMVNTANDTSK-AASESRKSR-LGGSSYGQLTRSDKIAAIK 141
           MHG+LACGRPLVVRLASEK + ++++D SK +  E  ++R + GSS GQ++R +K+ AIK
Sbjct: 1   MHGRLACGRPLVVRLASEKHLEDSSHDHSKRSLPEGNRTRFVNGSSSGQMSRDEKVTAIK 60

Query: 142 NKLRALEGGGESSSVKKPK 159
           NKL+ALE   E    KK K
Sbjct: 61  NKLKALE-EDEKRDPKKQK 78

[Close]
BLAST of Pay0009229 vs. TAIR 10
Match: AT3G16380.1 (poly(A) binding protein 6 )

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 31/83 (37.35%), Postives = 50/83 (60.24%), Query Frame = 0 

Query: 18  SKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKL 77
           S LY+ NL   + E  L ++F  +G+I+S   + H    + G  +GF F+ +S+ EE+K 
Sbjct: 304 SNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCH----ENGRSKGFGFVCFSNCEESKQ 363

Query: 78  AKEKMHGKLACGRPLVVRLASEK 101
           AK  ++G L  G+P+VVR+A  K
Sbjct: 364 AKRYLNGFLVDGKPIVVRVAERK 382

[Close]
BLAST of Pay0009229 vs. TAIR 10
Match: AT1G71770.1 (poly(A)-binding protein 5 )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 0 

Query: 18  SKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKL 77
           S LY+ NLD  + +  L ++FS +G + S   + +++G      RGF F+ YS+ EEA L
Sbjct: 342 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLS----RGFGFVAYSNPEEALL 401

Query: 78  AKEKMHGKLACGRPLVVRLASEK 101
           A ++M+GK+   +PL V LA  K
Sbjct: 402 AMKEMNGKMIGRKPLYVALAQRK 420

[Close]
BLAST of Pay0009229 vs. TAIR 10
Match: AT1G71770.2 (poly(A)-binding protein 5 )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 0 

Query: 18  SKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKL 77
           S LY+ NLD  + +  L ++FS +G + S   + +++G      RGF F+ YS+ EEA L
Sbjct: 342 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLS----RGFGFVAYSNPEEALL 401

Query: 78  AKEKMHGKLACGRPLVVRLASEK 101
           A ++M+GK+   +PL V LA  K
Sbjct: 402 AMKEMNGKMIGRKPLYVALAQRK 420

[Close]
BLAST of Pay0009229 vs. TAIR 10
Match: AT1G73530.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08
Identity = 40/120 (33.33%), Postives = 57/120 (47.50%), Query Frame = 0 

Query: 4   PPQDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRG 63
           PP  S+G      ++KLY+  L  R TE  L   F  FG +I  + +          P+G
Sbjct: 68  PPSSSSG-----PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMV---MDKVANRPKG 127

Query: 64  FAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTA---NDTSKAASESRKSR 121
           FAF+ Y ++EEA  A + MHGK   GR + V  A  +  ++ A    D  K  S+ R  R
Sbjct: 128 FAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKTRSDMSRAKPRRDFPKPQSKPRTFR 179

The following BLAST results are available for this feature:
BLAST of Pay0009229 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6PBM81.7e-1639.06Probable RNA-binding protein 18 OS=Danio rerio OX=7955 GN=rbm18 PE=2 SV=1[more]
Q96H357.2e-1538.28Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=RBM18 PE=2 SV=1[more]
Q9CR837.2e-1538.28Probable RNA-binding protein 18 OS=Mus musculus OX=10090 GN=Rbm18 PE=2 SV=1[more]
Q5R6W37.2e-1538.28Probable RNA-binding protein 18 OS=Pongo abelii OX=9601 GN=RBM18 PE=2 SV=1[more]
Q3ZCC58.0e-1436.72Probable RNA-binding protein 18 OS=Bos taurus OX=9913 GN=RBM18 PE=2 SV=1[more]
BLAST of Pay0009229 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TLJ63.9e-8899.42Putative RNA-binding protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A1S3ATX26.7e-88100.00probable RNA-binding protein 18 OS=Cucumis melo OX=3656 GN=LOC103482914 PE=4 SV=... [more]
A0A0A0KJM91.3e-8394.74RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140500 PE=4 SV... [more]
A0A6J1DXL81.1e-7184.39probable RNA-binding protein 18 isoform X2 OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1DUC51.5e-7184.88probable RNA-binding protein 18 isoform X1 OS=Momordica charantia OX=3673 GN=LOC... [more]
BLAST of Pay0009229 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0042597.18.1e-8899.42putative RNA-binding protein 18 [Cucumis melo var. makuwa][more]
XP_008437528.11.4e-87100.00PREDICTED: probable RNA-binding protein 18 [Cucumis melo][more]
XP_011654647.14.6e-8395.29probable RNA-binding protein 18 isoform X2 [Cucumis sativus] >KAE8647815.1 hypot... [more]
XP_031741097.16.8e-7983.08probable RNA-binding protein 18 isoform X1 [Cucumis sativus][more]
XP_038875193.11.3e-7291.03probable RNA-binding protein 18 [Benincasa hispida] >XP_038875194.1 probable RNA... [more]
BLAST of Pay0009229 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52545.11.6e-1254.43unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G16380.11.6e-0937.35poly(A) binding protein 6 [more]
AT1G71770.12.1e-0938.55poly(A)-binding protein 5 [more]
AT1G71770.22.1e-0938.55poly(A)-binding protein 5 [more]
AT1G73530.11.8e-0833.33RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 19..95
e-value: 2.8E-20
score: 83.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 20..92
e-value: 1.9E-14
score: 53.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 18..99
score: 16.858295
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 15..119
e-value: 1.8E-22
score: 81.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..127
NoneNo IPR availablePANTHERPTHR21245:SF2RNA-BINDING PROTEIN 18-RELATEDcoord: 13..167
NoneNo IPR availablePANTHERPTHR21245HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINcoord: 13..167
IPR039157RNA-binding protein 18, RNA recognition motifCDDcd12355RRM_RBM18coord: 19..98
e-value: 5.69238E-31
score: 105.436
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 5..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0009229.3Pay0009229.3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding