Pay0008526 (gene) Melon (Payzawat) v1

Overview
NamePay0008526
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDUF1279 domain-containing protein
Locationchr11: 2377963 .. 2378748 (-)
RNA-Seq ExpressionPay0008526
SyntenyPay0008526
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTCAAAACCCATTCTCCAGAAACTTCGAAAACCCTAGCCTCAACCTCCACCGCCAAGCTCCGACGCGCCGCCTCCCCTTCCCGGACCTCTTCCCTTCTCTTTTAATTAATGTCTTTCTTCACCGGCGGCGGACGATTCCGCGAGCTTCTTAAGAAGTACGGAAAAGTTGCAATTGGAGTTCATTTCTCAGTATCGGGGGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTAGAATCACTGCTCGATAAGCTACACATGGATCGATTCTTCTCTAAAGATCAGCCGCAGACAAATCCCTCGGAAGTCTCATCGTCCGTAGACGACGGATTTATAAACGAAGAAAGATCCGCGTCGGAAATTCAACCAACGAGGAATCGTACCGCCGAACTTGCAGCGTCGACTGGCGGTGCGTTGGCTTTGGCTGTGCTTTGCAACAAAGCATTACTCCCTATTCGGATTCCGATAACGATTGCGTTAACGCCGCCGATTGCGAGGTTGCTGGCGAGGCGAGGGATTGTGAGAAGTGGTTAAGGAACTGAAATCCATCTCATTTCTTCTTCTTCTTCTTCATGGACTTGCTGCATCTTGAGATCAACAGAGTACTGTGATTCATTCTCTACTTTTTCTTTCGAGAATTAATTTTTTTCAAGAAAGATTTTACGACAGATTTTGATAAGATATTTCTGTTCACATTGTCAAAATATAAATAAAAATCTCACCCTTAGTCCTTGATCTTGATCTTGATCTTGATCTTGTTCTTGTTCTTCC

mRNA sequence

AATTTCAAAACCCATTCTCCAGAAACTTCGAAAACCCTAGCCTCAACCTCCACCGCCAAGCTCCGACGCGCCGCCTCCCCTTCCCGGACCTCTTCCCTTCTCTTTTAATTAATGTCTTTCTTCACCGGCGGCGGACGATTCCGCGAGCTTCTTAAGAAGTACGGAAAAGTTGCAATTGGAGTTCATTTCTCAGTATCGGGGGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTAGAATCACTGCTCGATAAGCTACACATGGATCGATTCTTCTCTAAAGATCAGCCGCAGACAAATCCCTCGGAAGTCTCATCGTCCGTAGACGACGGATTTATAAACGAAGAAAGATCCGCGTCGGAAATTCAACCAACGAGGAATCGTACCGCCGAACTTGCAGCGTCGACTGGCGGTGCGTTGGCTTTGGCTGTGCTTTGCAACAAAGCATTACTCCCTATTCGGATTCCGATAACGATTGCGTTAACGCCGCCGATTGCGAGGTTGCTGGCGAGGCGAGGGATTGTGAGAAGTGGTTAAGGAACTGAAATCCATCTCATTTCTTCTTCTTCTTCTTCATGGACTTGCTGCATCTTGAGATCAACAGAGTACTGTGATTCATTCTCTACTTTTTCTTTCGAGAATTAATTTTTTTCAAGAAAGATTTTACGACAGATTTTGATAAGATATTTCTGTTCACATTGTCAAAATATAAATAAAAATCTCACCCTTAGTCCTTGATCTTGATCTTGATCTTGATCTTGTTCTTGTTCTTCC

Coding sequence (CDS)

ATGTCTTTCTTCACCGGCGGCGGACGATTCCGCGAGCTTCTTAAGAAGTACGGAAAAGTTGCAATTGGAGTTCATTTCTCAGTATCGGGGGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTAGAATCACTGCTCGATAAGCTACACATGGATCGATTCTTCTCTAAAGATCAGCCGCAGACAAATCCCTCGGAAGTCTCATCGTCCGTAGACGACGGATTTATAAACGAAGAAAGATCCGCGTCGGAAATTCAACCAACGAGGAATCGTACCGCCGAACTTGCAGCGTCGACTGGCGGTGCGTTGGCTTTGGCTGTGCTTTGCAACAAAGCATTACTCCCTATTCGGATTCCGATAACGATTGCGTTAACGCCGCCGATTGCGAGGTTGCTGGCGAGGCGAGGGATTGTGAGAAGTGGTTAA

Protein sequence

MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFSKDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPIARLLARRGIVRSG
Homology
BLAST of Pay0008526 vs. ExPASy TrEMBL
Match: A0A5A7TV59 (DUF1279 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001030 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.3e-70
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 146
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of Pay0008526 vs. ExPASy TrEMBL
Match: A0A1S3C646 (uncharacterized protein LOC103497342 OS=Cucumis melo OX=3656 GN=LOC103497342 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.3e-70
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 146
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of Pay0008526 vs. ExPASy TrEMBL
Match: A0A0A0LJH5 (DUF1279 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270860 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQ NPSE +SSVDDGF+NEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQINPSEATSSVDDGFMNEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 146
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of Pay0008526 vs. ExPASy TrEMBL
Match: A0A6J1G6W3 (uncharacterized protein LOC111451320 OS=Cucurbita moschata OX=3662 GN=LOC111451320 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.4e-59
Identity = 128/152 (84.21%), Postives = 136/152 (89.47%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD F S
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPT-------RNRTAELAASTGGALALAVLC 120
           KD PQT+PSE++SSVDDGF+ EER  S IQ T       RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSGIQSTVMEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPIARLLARRGIVRSG 146
           NKALLPIR+PITIALTPPIARLLARRGI+RSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

BLAST of Pay0008526 vs. ExPASy TrEMBL
Match: A0A6J1I2F7 (uncharacterized protein LOC111469888 OS=Cucurbita maxima OX=3661 GN=LOC111469888 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.6e-58
Identity = 128/152 (84.21%), Postives = 135/152 (88.82%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD F S
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPT-------RNRTAELAASTGGALALAVLC 120
           KD PQT+PSE++ SVDDGF+ EER  S IQ T       RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITPSVDDGFVIEERPTSGIQSTVVEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPIARLLARRGIVRSG 146
           NKALLPIRIPITIALTPPIARLLARRGI+RSG
Sbjct: 121 NKALLPIRIPITIALTPPIARLLARRGIMRSG 152

BLAST of Pay0008526 vs. NCBI nr
Match: XP_008457709.1 (PREDICTED: uncharacterized protein LOC103497342 [Cucumis melo] >KAA0045747.1 uncharacterized protein E6C27_scaffold243G002670 [Cucumis melo var. makuwa] >TYJ99535.1 uncharacterized protein E5676_scaffold123G001030 [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 4.8e-70
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 146
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of Pay0008526 vs. NCBI nr
Match: XP_004147050.1 (uncharacterized protein LOC101221163 [Cucumis sativus] >KGN61943.1 hypothetical protein Csa_006287 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 3.4e-68
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQ NPSE +SSVDDGF+NEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQINPSEATSSVDDGFMNEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 146
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of Pay0008526 vs. NCBI nr
Match: XP_038902628.1 (uncharacterized protein LOC120089278 [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 134/145 (92.41%), Postives = 140/145 (96.55%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD FFS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQT PSE++SSVDDGF+NEER ASEIQ TRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQTTPSEITSSVDDGFMNEERPASEIQSTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 146
           RIPITIALTPPIARLLARRGI+RSG
Sbjct: 121 RIPITIALTPPIARLLARRGIMRSG 145

BLAST of Pay0008526 vs. NCBI nr
Match: XP_023533856.1 (uncharacterized protein LOC111795580 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 129/152 (84.87%), Postives = 137/152 (90.13%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD F S
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSSASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPT-------RNRTAELAASTGGALALAVLC 120
           KD PQT+PSE++SSVDDGF+ EER  SEIQ T       RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSEIQSTVMEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPIARLLARRGIVRSG 146
           NKALLPIR+PITIALTPPIARLLARRGI+RSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

BLAST of Pay0008526 vs. NCBI nr
Match: XP_022947464.1 (uncharacterized protein LOC111451320 [Cucurbita moschata] >KAG7027024.1 hypothetical protein SDJN02_11032, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58
Identity = 128/152 (84.21%), Postives = 136/152 (89.47%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD F S
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPT-------RNRTAELAASTGGALALAVLC 120
           KD PQT+PSE++SSVDDGF+ EER  S IQ T       RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSGIQSTVMEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPIARLLARRGIVRSG 146
           NKALLPIR+PITIALTPPIARLLARRGI+RSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

BLAST of Pay0008526 vs. TAIR 10
Match: AT2G20940.1 (Protein of unknown function (DUF1279) )

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-34
Identity = 79/137 (57.66%), Postives = 99/137 (72.26%), Query Frame = 0

Query: 9   RFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFSKDQPQTNP 68
           R +E++KKYGKVA+GVHFSVSG SI+G Y+AIKNNVDVESLL+K  +  F SK+ P  NP
Sbjct: 4   RLKEIVKKYGKVALGVHFSVSGVSISGFYIAIKNNVDVESLLEKYQIPWFSSKENP--NP 63

Query: 69  SEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPIRIPITIAL 128
           S      + G +  +          N+T +LA S GGALALAVLCNKAL PIR+PIT+AL
Sbjct: 64  SLDLKLEEQGSVTSD----------NKTKQLAKSAGGALALAVLCNKALFPIRVPITMAL 123

Query: 129 TPPIARLLARRGIVRSG 146
           TPPIAR L +R I+++G
Sbjct: 124 TPPIARFLRQRKILKTG 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TV592.3e-70100.00DUF1279 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3C6462.3e-70100.00uncharacterized protein LOC103497342 OS=Cucumis melo OX=3656 GN=LOC103497342 PE=... [more]
A0A0A0LJH51.7e-6897.24DUF1279 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270860 PE=... [more]
A0A6J1G6W35.4e-5984.21uncharacterized protein LOC111451320 OS=Cucurbita moschata OX=3662 GN=LOC1114513... [more]
A0A6J1I2F71.6e-5884.21uncharacterized protein LOC111469888 OS=Cucurbita maxima OX=3661 GN=LOC111469888... [more]
Match NameE-valueIdentityDescription
XP_008457709.14.8e-70100.00PREDICTED: uncharacterized protein LOC103497342 [Cucumis melo] >KAA0045747.1 unc... [more]
XP_004147050.13.4e-6897.24uncharacterized protein LOC101221163 [Cucumis sativus] >KGN61943.1 hypothetical ... [more]
XP_038902628.11.8e-6492.41uncharacterized protein LOC120089278 [Benincasa hispida][more]
XP_023533856.11.7e-5984.87uncharacterized protein LOC111795580 [Cucurbita pepo subsp. pepo][more]
XP_022947464.11.1e-5884.21uncharacterized protein LOC111451320 [Cucurbita moschata] >KAG7027024.1 hypothet... [more]
Match NameE-valueIdentityDescription
AT2G20940.13.5e-3457.66Protein of unknown function (DUF1279) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009688Protein FAM210A/B-like domainPFAMPF06916DUF1279coord: 9..130
e-value: 2.6E-26
score: 92.0
NoneNo IPR availablePANTHERPTHR21377:SF0PROTEIN FAM210B, MITOCHONDRIALcoord: 8..141
NoneNo IPR availablePANTHERPTHR21377UNCHARACTERIZEDcoord: 8..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0008526.1Pay0008526.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion