Pay0008308 (gene) Melon (Payzawat) v1

Overview


Name	Pay0008308
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr12: 2727209 .. 2727526 (+)
RNA-Seq Expression	Pay0008308
Synteny	Pay0008308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATGACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATGACGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATGCTGTATCTCAACAATATTAG

mRNA sequence

ATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATGACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATGACGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATGCTGTATCTCAACAATATTAG

Coding sequence (CDS)

ATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATGACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATGACGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATGCTGTATCTCAACAATATTAG

Protein sequence

MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY

Homology

[Close]

BLAST of Pay0008308 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.9e-09
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 39  YKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 98
           Y VK +E+      C++C+ EFE+++   V+  CGH FH DC+D W R  S CPLCR  V
Sbjct: 101 YSVKTHESPLEE--CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of Pay0008308 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 53  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 99
           C++C+ EF+DEE   ++ +C H FH DC+D WL+  + CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of Pay0008308 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 53  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 99
           C++C+ EFE+E+   ++  CGH FH DC+D W R  S CPLCR  V
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Pay0008308 vs. ExPASy Swiss-Prot
Match: Q9C7I1 (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-08
Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 40  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 96
           +VK  + G     CAIC+ EFEDEE   ++  C H FH  C+D WL   S CP+CR
Sbjct: 115 QVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170

[Close]

BLAST of Pay0008308 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-08
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 0


Query: 41  VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA 100
           VK+++ G     CAIC+ E ED E   ++  C H FH DC+D WL   + CP+CR  + A
Sbjct: 112 VKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTA 171

Query: 101 VSQQ 105
            S +
Sbjct: 172 KSNK 175

[Close]

BLAST of Pay0008308 vs. ExPASy TrEMBL
Match: A0A5A7VMH1 (RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00560 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.9e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF 60
           MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF
Sbjct: 45  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF 104

Query: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 106
           EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 105 EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 149

[Close]

BLAST of Pay0008308 vs. ExPASy TrEMBL
Match: A0A5D3BE50 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002270 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 9.3e-53
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF 60
           MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEF
Sbjct: 45  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF 104

Query: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 106
           EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 105 EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 149

[Close]

BLAST of Pay0008308 vs. ExPASy TrEMBL
Match: A0A1S4E1K2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 9.3e-53
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF 60
           MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEF
Sbjct: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF 60

Query: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 106
           EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 105

[Close]

BLAST of Pay0008308 vs. ExPASy TrEMBL
Match: A0A6J1I5C3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19
Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 2   QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIE 61
           +L A+ +AE++RQ+Q+         T  EE +S V  VAY+ +K  +   S  CCAICIE
Sbjct: 50  RLFARFRAEVMRQQQSIAVPPPRPNTAEEEAASIVTKVAYRDIKPTKEADSDDCCAICIE 109

Query: 62  EFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 104
            FE+EEICGVV+ C HCFH+ C+D+WL I SRCPLCRCLV  VS+
Sbjct: 110 GFEEEEICGVVDGCDHCFHKVCIDKWLGIVSRCPLCRCLVRVVSE 154

[Close]

BLAST of Pay0008308 vs. ExPASy TrEMBL
Match: A0A6J1HJU0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.7e-19
Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 2   QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIE 61
           +L A+ +AE ++Q+Q+         T  EE +S V  VAY+ +K  E       CAICIE
Sbjct: 50  RLFARFRAEFMQQQQSIAAPPPRSNTAEEEAASIVTKVAYRDIKTTEEADVDDYCAICIE 109

Query: 62  EFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 104
            FE+EEICGV++ CGHCFH+ C+DQWLRI SRCPLCRCL+  VS+
Sbjct: 110 GFEEEEICGVLDRCGHCFHKVCIDQWLRIGSRCPLCRCLIRVVSE 154

[Close]

BLAST of Pay0008308 vs. NCBI nr
Match: KAA0067736.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 3.9e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF 60
           MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF
Sbjct: 45  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF 104

Query: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 106
           EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 105 EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 149

[Close]

BLAST of Pay0008308 vs. NCBI nr
Match: TYJ97407.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF 60
           MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEF
Sbjct: 45  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF 104

Query: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 106
           EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 105 EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 149

[Close]

BLAST of Pay0008308 vs. NCBI nr
Match: XP_016902103.1 (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEF 60
           MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEF
Sbjct: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF 60

Query: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 106
           EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 105

[Close]

BLAST of Pay0008308 vs. NCBI nr
Match: XP_023520574.1 (RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 111.7 bits (278), Expect = 3.9e-21
Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 2   QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIE 61
           +L A+ +AE++R++ +  TT     T  EE +S V  VAYK +K  E   S  CCAICIE
Sbjct: 54  RLFARFRAEVMRRQSSIATTPPRPNTAEEEAASIVTKVAYKDIKTTEEADSDDCCAICIE 113

Query: 62  EFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 104
            FE++EICGV++ CGHCFH+ C+DQWL I+SRCPLCRCLV  VS+
Sbjct: 114 GFEEDEICGVLDRCGHCFHKICIDQWLGIKSRCPLCRCLVRVVSE 158

[Close]

BLAST of Pay0008308 vs. NCBI nr
Match: KAG6583431.1 (RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111.7 bits (278), Expect = 3.9e-21
Identity = 58/105 (55.24%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 2   QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIE 61
           +L A+ +AE +RQ+Q+         T  EE +S V  VAYK +K  E   S  CCAICIE
Sbjct: 54  RLFARFRAEFMRQQQSIVAPPPRSNTAEEEAASIVTKVAYKDIKTTEEADSDDCCAICIE 113

Query: 62  EFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 104
            F++EEICGV++ CGHCFH+ C+DQWL IESRCPLCRCLV  VS+
Sbjct: 114 GFQEEEICGVLDRCGHCFHKVCIDQWLGIESRCPLCRCLVRVVSE 158

[Close]

BLAST of Pay0008308 vs. TAIR 10
Match: AT5G53110.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 53  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 96
           CAIC+ E+E +E    +  C HCFH DC+D+WL++   CP+CR
Sbjct: 330 CAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372

[Close]

BLAST of Pay0008308 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 61.2 bits (147), Expect = 5.6e-10
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 39  YKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 98
           Y VK +E+      C++C+ EFE+++   V+  CGH FH DC+D W R  S CPLCR  V
Sbjct: 101 YSVKTHESPLEE--CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of Pay0008308 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 9.6e-10
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 53  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 99
           C++C+ EFE+E+   ++  CGH FH DC+D W R  S CPLCR  V
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Pay0008308 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 9.6e-10
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 53  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 99
           C++C+ EF+DEE   ++ +C H FH DC+D WL+  + CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of Pay0008308 vs. TAIR 10
Match: AT1G35330.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09
Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 40  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 96
           +VK  + G     CAIC+ EFEDEE   ++  C H FH  C+D WL   S CP+CR
Sbjct: 115 QVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170

The following BLAST results are available for this feature:

BLAST of Pay0008308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZJ6	7.9e-09	45.00	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q9LSW9	1.3e-08	47.83	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
O22255	1.3e-08	50.00	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9C7I1	2.3e-08	46.43	RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1	[more]
Q8W571	3.0e-08	40.63	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]

BLAST of Pay0008308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VMH1	1.9e-53	100.00	RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BE50	9.3e-53	99.05	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E1K2	9.3e-53	99.05	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 ...	[more]
A0A6J1I5C3	1.3e-19	52.38	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 P...	[more]
A0A6J1HJU0	6.7e-19	51.43	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742...	[more]

BLAST of Pay0008308 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067736.1	3.9e-53	100.00	RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]	[more]
TYJ97407.1	1.9e-52	99.05	RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]	[more]
XP_016902103.1	1.9e-52	99.05	PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo]	[more]
XP_023520574.1	3.9e-21	54.29	RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo]	[more]
KAG6583431.1	3.9e-21	55.24	RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Pay0008308 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53110.1	1.9e-10	48.84	RING/U-box superfamily protein	[more]
AT3G62690.1	5.6e-10	45.00	AtL5	[more]
AT2G47560.1	9.6e-10	50.00	RING/U-box superfamily protein	[more]
AT5G43420.1	9.6e-10	47.83	RING/U-box superfamily protein	[more]
AT1G35330.1	1.6e-09	46.43	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 53..94 e-value: 2.7E-4 score: 30.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 53..95 e-value: 5.1E-11 score: 42.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 53..95 score: 13.330199
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 8..100 e-value: 9.4E-17 score: 62.5
None	No IPR available	PANTHER	PTHR45676:SF73	E3 UBIQUITIN-PROTEIN LIGASE RING1-RELATED	coord: 18..101
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 52..100
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 18..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0008308.1	Pay0008308.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane