Pay0006537 (gene) Melon (Payzawat) v1

Overview
NamePay0006537
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionChromosome-associated kinesin KIF4
Locationchr10: 10311493 .. 10312034 (-)
RNA-Seq ExpressionPay0006537
SyntenyPay0006537
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTAGACAATAGTACTAGCCAGCTTACAATTTTTTATATTTATTTTATATATATTCTTTTAATACTGTTTCTTCAGGGTTTTCATCGCAAATGGAGGATATTAACGTTATGGCTGCTATGTCTGGTTCCACCTCTGCTCTTGTTGCTTCAGCAGATGCGACAAAAGCAGCTGCAGCAGGTAATCTTGGCGATGCAGCTGATGCCGTTTATCGTGCTGAAGCTTCTGCTTTGGCTACGAAAGCTGCATCGGAAGTTGTTGTGGCTGCTGCCCCTGGAACCCTTATGGCCAATCTCACCACTATTTCAGCTAGTCTTGCAAAAATTTCTGCTTCAGTGGCTTCTATTGCTTTAAACATTGCTTCTGCGCCCAATCCCAATCCTCATGTTGATAATGCTGTGGTTCCTAATGTCAACCAACAACGGCAACATAATTGCGAATGTGACGTTTACTGCAAAACTAGAAGATGCGACTGTCGTGGAACTGACAAACGATGCACTGACGATTGTAGTTGCTCCATTCTTCAATGTAGAAATAGATAG

mRNA sequence

GTTTTAGACAATAGTACTAGCCAGCTTACAATTTTTTATATTTATTTTATATATATTCTTTTAATACTGTTTCTTCAGGGTTTTCATCGCAAATGGAGGATATTAACGTTATGGCTGCTATGTCTGGTTCCACCTCTGCTCTTGTTGCTTCAGCAGATGCGACAAAAGCAGCTGCAGCAGGTAATCTTGGCGATGCAGCTGATGCCGTTTATCGTGCTGAAGCTTCTGCTTTGGCTACGAAAGCTGCATCGGAAGTTGTTGTGGCTGCTGCCCCTGGAACCCTTATGGCCAATCTCACCACTATTTCAGCTAGTCTTGCAAAAATTTCTGCTTCAGTGGCTTCTATTGCTTTAAACATTGCTTCTGCGCCCAATCCCAATCCTCATGTTGATAATGCTGTGGTTCCTAATGTCAACCAACAACGGCAACATAATTGCGAATGTGACGTTTACTGCAAAACTAGAAGATGCGACTGTCGTGGAACTGACAAACGATGCACTGACGATTGTAGTTGCTCCATTCTTCAATGTAGAAATAGATAG

Coding sequence (CDS)

ATGGAGGATATTAACGTTATGGCTGCTATGTCTGGTTCCACCTCTGCTCTTGTTGCTTCAGCAGATGCGACAAAAGCAGCTGCAGCAGGTAATCTTGGCGATGCAGCTGATGCCGTTTATCGTGCTGAAGCTTCTGCTTTGGCTACGAAAGCTGCATCGGAAGTTGTTGTGGCTGCTGCCCCTGGAACCCTTATGGCCAATCTCACCACTATTTCAGCTAGTCTTGCAAAAATTTCTGCTTCAGTGGCTTCTATTGCTTTAAACATTGCTTCTGCGCCCAATCCCAATCCTCATGTTGATAATGCTGTGGTTCCTAATGTCAACCAACAACGGCAACATAATTGCGAATGTGACGTTTACTGCAAAACTAGAAGATGCGACTGTCGTGGAACTGACAAACGATGCACTGACGATTGTAGTTGCTCCATTCTTCAATGTAGAAATAGATAG

Protein sequence

MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAAPGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCECDVYCKTRRCDCRGTDKRCTDDCSCSILQCRNR
Homology
[Close]
BLAST of Pay0006537 vs. ExPASy TrEMBL
Match: A0A5D3CTB1 (Chromosome-associated kinesin KIF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001100 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0 

Query: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60
           MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA
Sbjct: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60

Query: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCECDVY 120
           PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNC CDVY
Sbjct: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120

Query: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 150
           CKTRRCDCRGTDKRCTDDCSCSILQCRNR
Sbjct: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 149

[Close]
BLAST of Pay0006537 vs. ExPASy TrEMBL
Match: A0A1S3CNA8 (uncharacterized protein LOC103502885 OS=Cucumis melo OX=3656 GN=LOC103502885 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0 

Query: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60
           MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA
Sbjct: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60

Query: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCECDVY 120
           PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNC CDVY
Sbjct: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120

Query: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 150
           CKTRRCDCRGTDKRCTDDCSCSILQCRNR
Sbjct: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 149

[Close]
BLAST of Pay0006537 vs. NCBI nr
Match: XP_008465229.1 (PREDICTED: uncharacterized protein LOC103502885 [Cucumis melo] >KAA0065697.1 Chromosome-associated kinesin KIF4 [Cucumis melo var. makuwa] >TYK14448.1 Chromosome-associated kinesin KIF4 [Cucumis melo var. makuwa])

HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0 

Query: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60
           MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA
Sbjct: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60

Query: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCECDVY 120
           PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNC CDVY
Sbjct: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120

Query: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 150
           CKTRRCDCRGTDKRCTDDCSCSILQCRNR
Sbjct: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 149

The following BLAST results are available for this feature:
BLAST of Pay0006537 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0006537 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CTB11.1e-6799.33Chromosome-associated kinesin KIF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3CNA81.1e-6799.33uncharacterized protein LOC103502885 OS=Cucumis melo OX=3656 GN=LOC103502885 PE=... [more]
BLAST of Pay0006537 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465229.12.3e-6799.33PREDICTED: uncharacterized protein LOC103502885 [Cucumis melo] >KAA0065697.1 Chr... [more]
BLAST of Pay0006537 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0006537.1Pay0006537.1mRNA