Homology
BLAST of Pay0005361 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 279.3 bits (713), Expect = 1.3e-73
Identity = 229/761 (30.09%), Postives = 331/761 (43.50%), Query Frame = 0
Query: 30 SLVKPNDDSFLLWKFQILTILEAYDLEIFLESESEPPSKYLTSTGSSSTSATRTPNPEYK 89
++ K ++L+W Q+ + + Y+L FL+ + P + T A NP+Y
Sbjct: 22 NVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMP------PATIGTDAVPRVNPDYT 81
Query: 90 VWKRQDRLISSWILGS-------------------------------------------- 149
W+RQD+LI S ILG+
Sbjct: 82 RWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITRFD 141
Query: 150 -MTLINKSVSSDDHILYILAGLGSDYQSMISVISKKN------------------LLSFC 209
+ L+ K + D+ + +L L DY+ +I I+ K+ LL+
Sbjct: 142 QLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALN 201
Query: 210 TRSYVFITYS----RMNNQHNQRGGRGNGR--------------SNRGGRGNRNKP---- 269
+ V IT + R N + + RG+ R S+ G R + +P
Sbjct: 202 SAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYL 261
Query: 270 -QCQICTKHRHNMSAMVA--------------------SPDLNI-------DNNWYPDSG 329
+CQIC+ H+ P N+ NNW DSG
Sbjct: 262 GRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSG 321
Query: 330 ATNHLTH----------IRGGIQIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFFHV 389
AT+H+T GG + A+G +PITH GS S +S +S LN +V
Sbjct: 322 ATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTS---SRSLDLNKVLYV 381
Query: 390 PFITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIQPSHKRL 449
P I KNLISV + N V EF P VKDL+TG LLQG D LY++ I S
Sbjct: 382 PNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS---- 441
Query: 450 HHSELNTKSVFNTVVPKSNSHLLDLSHRRLGHPHLPTVKDVL-NHIDYSSGTMNKMTFCE 509
S+F + K+ H RLGHP L + V+ NH +K+ C
Sbjct: 442 -----QAVSMFASPCSKATH---SSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCS 501
Query: 510 ACALGKHHALPFSHSLTHYTHPLQIISCDLWGPAINVSHNCFSYYISFVDAYSRYTWIYF 569
C + K H +PFS+S + PL+ I D+W I +S + + YY+ FVD ++RYTW+Y
Sbjct: 502 DCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPI-LSIDNYRYYVIFVDHFTRYTWLYP 561
Query: 570 LYSK---PDAFL--------TFQNSKPVLQTDGGTEFKPFKPFLDQHGIKHRITCPYTSK 622
L K D F+ FQ L +D G EF + +L QHGI H + P+T +
Sbjct: 562 LKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPE 621
BLAST of Pay0005361 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 272.3 bits (695), Expect = 1.6e-71
Identity = 217/757 (28.67%), Postives = 329/757 (43.46%), Query Frame = 0
Query: 30 SLVKPNDDSFLLWKFQILTILEAYDLEIFLESESEPPSKYLTSTGSSSTSATRTPNPEYK 89
++ K ++L+W Q+ + + Y+L FL+ + P + T A NP+Y
Sbjct: 22 NVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMP------PATIGTDAAPRVNPDYT 81
Query: 90 VWKRQDRLISSWILGS-------------------------------------------- 149
WKRQD+LI S +LG+
Sbjct: 82 RWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQW 141
Query: 150 --------------------MTLINKSVSSDDHILYILAGLGSDYQSMISVISKKN---- 209
+ L+ K + D+ + +L L +Y+ +I I+ K+
Sbjct: 142 TKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPT 201
Query: 210 --------------LLSFCTRSYVFITYSRMNNQ------HNQRGGRGNGRSNRGG---- 269
+L+ + + + IT + ++++ +N G R N NR
Sbjct: 202 LTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNS 261
Query: 270 ------------RGNRNKP---QCQI----------CTKHRHNMSAMVA----------S 329
N++KP +CQI C++ +H +S++ +
Sbjct: 262 KPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQ 321
Query: 330 PDLNI-------DNNWYPDSGATNHLTH----------IRGGIQIYAANGLGLPITHYGS 389
P N+ NNW DSGAT+H+T GG + A+G +PI+H GS
Sbjct: 322 PRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGS 381
Query: 390 MSFNSSILPFKSFTLNNFFHVPFITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVL 449
S ++ P L+N +VP I KNLISV + N V EF P VKDL+TG L
Sbjct: 382 TSLSTKSRP---LNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPL 441
Query: 450 LQGLLNDGLYKFTIQPSHKRLHHSELNTKSVFNTVVPKSNSHLLDLSHRRLGHPHLPTVK 509
LQG D LY++ I S + ++K+ ++ H RLGHP +
Sbjct: 442 LQGKTKDELYEWPIASSQPVSLFASPSSKATHSS------------WHARLGHPAPSILN 501
Query: 510 DVLNHIDYSSGTMN---KMTFCEACALGKHHALPFSHSLTHYTHPLQIISCDLWGPAINV 569
V++ +YS +N K C C + K + +PFS S + T PL+ I D+W I +
Sbjct: 502 SVIS--NYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPI-L 561
Query: 570 SHNCFSYYISFVDAYSRYTWIYFLYSK---PDAFLTFQNSKP--------VLQTDGGTEF 598
SH+ + YY+ FVD ++RYTW+Y L K + F+TF+N +D G EF
Sbjct: 562 SHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEF 621
BLAST of Pay0005361 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 1.4e-30
Identity = 161/667 (24.14%), Postives = 267/667 (40.03%), Query Frame = 0
Query: 154 TYSRMNNQHNQRGGRGNGRS------------NRGGRGNRNKPQCQ------ICTKHRHN 213
+Y R +N + + G RG ++ N+ G R+ P + K+ N
Sbjct: 204 SYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDN 263
Query: 214 MSAMVASPDLNI---------------DNNWYPDSGATNHLTHIRGGIQIYAANGLGL-- 273
+AMV + D + ++ W D+ A++H T +R Y A G
Sbjct: 264 TAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVK 323
Query: 274 -------PITHYGSMSFNSSILPFKSFTLNNFFHVPFITKNLISVSQFAKDNHVFFEFHP 333
I G + +++ + L + HVP + NLIS +D + + +
Sbjct: 324 MGNTSYSKIAGIGDICIKTNV--GCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQ 383
Query: 334 TLCYVKDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSELNTKSVFNTVVPKSNSHLLDL 393
K V+ +G+ LY+ ++ + ELN + +DL
Sbjct: 384 KWRLTKG---SLVIAKGVARGTLYR-----TNAEICQGELNA---------AQDEISVDL 443
Query: 394 SHRRLGHPHLPTVKDVLNH--IDYSSGTMNKMTFCEACALGKHHALPFSHSLTHYTHPLQ 453
H+R+GH ++ + I Y+ GT K C+ C GK H + F S + L
Sbjct: 444 WHKRMGHMSEKGLQILAKKSLISYAKGTTVKP--CDYCLFGKQHRVSFQTSSERKLNILD 503
Query: 454 IISCDLWGPAINVSHNCFSYYISFVDAYSRYTWIYFLYSKPDAFLTFQNSKPV------- 513
++ D+ GP S Y+++F+D SR W+Y L +K F FQ +
Sbjct: 504 LVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGR 563
Query: 514 ----LQTDGGTEF--KPFKPFLDQHGIKHRITCPYTSKQNDIVERKHRHIMEMGLTLLSQ 573
L++D G E+ + F+ + HGI+H T P T + N + ER +R I+E ++L
Sbjct: 564 KLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRM 623
Query: 574 ATLPLSFWDEAFSTSVYLINCLPTSVLDNISPLEKLSGWKPNFPSFRVFGCKWYKCLASD 633
A LP SFW EA T+ YLIN P+ L P + + ++ +VFGC+ + + +
Sbjct: 624 AKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKE 683
Query: 634 GRLFISKHVLFDENSFPYASFSSHSSMLKSKNVLSPPFHSIIQSS--LINHNEDRRHTDT 693
R D+ S P F + + P +I+S + +E R D
Sbjct: 684 QR------TKLDDKSIP-CIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADM 743
Query: 694 VSDNTDHLNPIIVYPLETGTQESSRDDGNIGGITQSLSP---MEPQHQIDSGMNT---QL 748
+ + P V T +S + Q P +E Q+D G+
Sbjct: 744 SEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPT 803
BLAST of Pay0005361 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 110.5 bits (275), Expect = 8.1e-23
Identity = 117/452 (25.88%), Postives = 184/452 (40.71%), Query Frame = 0
Query: 178 RGNRNKPQCQICTKHRHNMSAMVASPDLNIDN-NWYPDSGATNHLTHIRG--GIQIYAAN 237
+ N+ Q Q T H + +DN + DSGA++HL + +
Sbjct: 255 KNKENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDESLYTDSVEVVP 314
Query: 238 GLGLPITHYGSMSF--NSSILPFKS---FTLNNFFHVPFITKNLISVSQFAKDNHVFFEF 297
L + + G + I+ ++ TL + NL+SV + ++ + EF
Sbjct: 315 PLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRL-QEAGMSIEF 374
Query: 298 HPTLCYVKDLDTGQVLLQGLLND----GLYKFTIQPSHK---RLHHSELNTKSVFNTVVP 357
+ + V G+LN+ ++I HK RL H
Sbjct: 375 DKSGVTISKNGLMVVKNSGMLNNVPVINFQAYSINAKHKNNFRLWHERF----------- 434
Query: 358 KSNSHLLDLSHRRLGHPHLPTVKDVLNHIDYSSGTMNKMTFCEACALGKHHALPFSH--S 417
H+ D + ++ + + +LN+++ S CE C GK LPF
Sbjct: 435 ---GHISDGKLLEIKRKNMFSDQSLLNNLELS------CEICEPCLNGKQARLPFKQLKD 494
Query: 418 LTHYTHPLQIISCDLWGPAINVSHNCFSYYISFVDAYSRYTWIYFLYSKPDAFLTFQ--- 477
TH PL ++ D+ GP V+ + +Y++ FVD ++ Y Y + K D F FQ
Sbjct: 495 KTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFV 554
Query: 478 -------NSKPV-LQTDGGTEF--KPFKPFLDQHGIKHRITCPYTSKQNDIVERKHRHIM 537
N K V L D G E+ + F + GI + +T P+T + N + ER R I
Sbjct: 555 AKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTIT 614
Query: 538 EMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTSVLDNIS--PLEKLSGWKPNFPSFRVF 593
E T++S A L SFW EA T+ YLIN +P+ L + S P E KP RVF
Sbjct: 615 EKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVF 674
BLAST of Pay0005361 vs. ExPASy Swiss-Prot
Match:
P0C2I5 (Transposon Ty1-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-LR2 PE=3 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 8.1e-15
Identity = 92/367 (25.07%), Postives = 151/367 (41.14%), Query Frame = 0
Query: 214 DSGATNHLT----HIRGG-----IQIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFF 273
DSGA+ L HI I + A +PI G + F+ + T
Sbjct: 461 DSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFH---FQDNTKTSIKVL 520
Query: 274 HVPFITKNLISVSQFAKDNHVFFEFHPTLCYVKDL---DTGQVLLQGLLNDGLYKFTIQP 333
H P I +L+S+++ A T C+ K++ G VL + Y
Sbjct: 521 HTPNIAYDLLSLNELA-------AVDITACFTKNVLERSDGTVLAPIVKYGDFY----WV 580
Query: 334 SHKRLHHSELNTKSVFNTVVPKS-NSHLLDLSHRRLGHPHLPTVKDVLNH---------- 393
S K L S ++ ++ N +S + HR L H + PT++ L +
Sbjct: 581 SKKYLLPSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAPTIRYSLKNNTITYFNESD 640
Query: 394 IDYSSGTMNKMTFCEACALGK----HHALPFSHSLTHYTHPLQIISCDLWGPAINVSHNC 453
+D+SS + C C +GK H + P Q + D++GP N+ ++
Sbjct: 641 VDWSSAIDYQ---CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSA 700
Query: 454 FSYYISFVDAYSRYTWIYFLYSKP-----DAFLT--------FQNSKPVLQTDGGTEF-- 513
SY+ISF D +++ W+Y L+ + D F T FQ S V+Q D G+E+
Sbjct: 701 PSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTN 760
Query: 514 KPFKPFLDQHGIKHRITCPYTSKQNDIVERKHRHIMEMGLTLLSQATLPLSFWDEAFSTS 539
+ FL+++GI T S+ + + ER +R +++ T L + LP W A S
Sbjct: 761 RTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFS 810
BLAST of Pay0005361 vs. ExPASy TrEMBL
Match:
A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)
HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 599/889 (67.38%), Postives = 628/889 (70.64%), Query Frame = 0
Query: 1 MSSNSSLLGVENTNASSPINQIFGSGKKISLVKPNDDSFLLWKFQILTILEAYDLEIFLE 60
MSS SSLLGVENT ASSPINQIFGSG KISLVK NDD+FLLWKFQILT LEAYDLE FLE
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60
Query: 61 SESEPPSKYLTSTGSSSTSATRTPNPEYKVWKRQDRLISSWILGSMT------------- 120
SESEPPSKYL ST SSS SAT TPNP YKVWKRQDRLISSW+LGSM+
Sbjct: 61 SESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSA 120
Query: 121 ---------------------------------------------------LINKSVSSD 180
INK VSSD
Sbjct: 121 KEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSD 180
Query: 181 DHILYILAGLGSDYQSMISVISKK---------------------------------NLL 240
DHILYILAGLGSDYQSMISVIS + N++
Sbjct: 181 DHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIV 240
Query: 241 SFCT----RSYVFITYSRMNNQH--NQRGGRGNGRSNRGGRGNRNKPQCQICTK------ 300
+ T SY+ + +N H NQRGGRGNGRSNRG RGNRNKPQCQIC K
Sbjct: 241 TQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSAD 300
Query: 301 -----------------HRHN-----------MSAMVASPDLNIDNNWYPDSGATNHLTH 360
+ HN MSAMVA+ DLNID+NWYPDSGATNHLTH
Sbjct: 301 RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTH 360
Query: 361 ----------IRGGIQIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFFHVPFITKNL 420
GG QIYAANG GLPITHYGSMSFNSS LPFKSFTLNN VP ITKNL
Sbjct: 361 SLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNL 420
Query: 421 ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSELNT 480
ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTI+PSHKRLHHS NT
Sbjct: 421 ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNT 480
Query: 481 KSVFNTVVPKSNSHLLDLSHRRLGHPHLPTVKDVLNHIDYSSGTMNKMTFCEACALGKHH 540
K VFNTVVPKSN+ LLDL HRRLGHPHLP VK VLNHID SSGT+NK+ FCEACALGKHH
Sbjct: 481 KPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHH 540
Query: 541 ALPFSHSLTHYTHPLQIISCDLWGPAINVSHNCFSYYISFVDAYSRYTWIYFLYSKPDAF 600
ALPFSHSLT YTHPLQ+I+CDLWGPA+NVSHN F YYISFVDAYSRYTWIYFL SK DAF
Sbjct: 541 ALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF 600
Query: 601 LTFQNSKPV-----------LQTDGGTEFKPFKPFLDQHGIKHRITCPYTSKQNDIVERK 660
L FQ K LQTDGGTEFKPFKPFLDQHGI+HRITCPYTSKQNDIVERK
Sbjct: 601 LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERK 660
Query: 661 HRHIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTSVLDNISPLEKLSGWKPNFPSF 702
HR+IMEMGLTLLSQATLPLSFWDEAFSTSVYLIN LPT VLDNISPLEKL KPNFPS
Sbjct: 661 HRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSL 720
BLAST of Pay0005361 vs. ExPASy TrEMBL
Match:
A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)
HSP 1 Score: 1087.0 bits (2810), Expect = 0.0e+00
Identity = 599/889 (67.38%), Postives = 627/889 (70.53%), Query Frame = 0
Query: 1 MSSNSSLLGVENTNASSPINQIFGSGKKISLVKPNDDSFLLWKFQILTILEAYDLEIFLE 60
MSS SSLLGVENT ASSPINQIFGSG KISLVK NDD+FLLWKFQILT LEAYDLE FLE
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60
Query: 61 SESEPPSKYLTSTGSSSTSATRTPNPEYKVWKRQDRLISSWILGSMT------------- 120
SESEPPSKYL ST SSS SAT TPNP YKVWKRQDRLISSW+LGSM+
Sbjct: 61 SESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSA 120
Query: 121 ---------------------------------------------------LINKSVSSD 180
INK VSSD
Sbjct: 121 KEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSD 180
Query: 181 DHILYILAGLGSDYQSMISVISKK---------------------------------NLL 240
DHILYILAGLGSDYQSMISVIS + N++
Sbjct: 181 DHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIV 240
Query: 241 SFCT----RSYVFITYSRMNNQH--NQRGGRGNGRSNRGGRGNRNKPQCQICTK------ 300
+ T SY+ + +N H NQRGGRGNGRSNRG RGNRNKPQCQIC K
Sbjct: 241 TQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSAD 300
Query: 301 -----------------HRHN-----------MSAMVASPDLNIDNNWYPDSGATNHLTH 360
+ HN MSAMVA+ DLNID+NWYPDSGATNHLTH
Sbjct: 301 RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTH 360
Query: 361 ----------IRGGIQIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFFHVPFITKNL 420
GG QIYAANG GLPITHYGSMSFNSS LPFKSFTLNN VP ITKNL
Sbjct: 361 SLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNL 420
Query: 421 ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSELNT 480
ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTI+PSHKRLHHS NT
Sbjct: 421 ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNT 480
Query: 481 KSVFNTVVPKSNSHLLDLSHRRLGHPHLPTVKDVLNHIDYSSGTMNKMTFCEACALGKHH 540
K VFNTVVPKSN+ LLDL HRRLGHPHLP VK VLNHID SSGT+NK+ FCEACALGKHH
Sbjct: 481 KPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHH 540
Query: 541 ALPFSHSLTHYTHPLQIISCDLWGPAINVSHNCFSYYISFVDAYSRYTWIYFLYSKPDAF 600
ALPFSHSLT YTHPLQ+I+CDLWGPA+NVSHN F YYISFVDAYSRYTWIYFL SK DAF
Sbjct: 541 ALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF 600
Query: 601 LTFQNSKPV-----------LQTDGGTEFKPFKPFLDQHGIKHRITCPYTSKQNDIVERK 660
L FQ K LQTDGGTEFKPFKPFLDQHGI+HRITCPYTSKQNDIVERK
Sbjct: 601 LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERK 660
Query: 661 HRHIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTSVLDNISPLEKLSGWKPNFPSF 702
HR+IMEMGLTLLSQATLPLSFWDEAFSTSVYLIN LPT VLDNISPLEKL KPNFPS
Sbjct: 661 HRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSL 720
BLAST of Pay0005361 vs. ExPASy TrEMBL
Match:
A0A5A7VFQ6 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00150 PE=4 SV=1)
HSP 1 Score: 717.6 bits (1851), Expect = 5.3e-203
Identity = 391/596 (65.60%), Postives = 407/596 (68.29%), Query Frame = 0
Query: 194 HNMSAMVASPDLNIDNNWYPDSGATNHLTH----------IRGGIQIYAANGLGLPITHY 253
H MSAMVA+PDLNID+NWYPDSGATNHLTH GG QIYAANG GLPITHY
Sbjct: 40 HQMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHY 99
Query: 254 GSMSFNSSILPFKSFTLNNFFHVPFITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQ 313
GSMSFNSS LPFKSFTLNN H DLDTGQ
Sbjct: 100 GSMSFNSSTLPFKSFTLNNLLH--------------------------------DLDTGQ 159
Query: 314 VLLQGLLNDGLYKFTIQPSHKRLHHSELNTKSVFNTVVPKSNSHLLDLSHRRLGHPHLPT 373
VLLQGLLNDGLYKFTIQPSHKRLHHS+ NTKSVFNTVVPKSN+ LLDL HRRLGHPHLPT
Sbjct: 160 VLLQGLLNDGLYKFTIQPSHKRLHHSDSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPT 219
Query: 374 VKDVLNHIDYSSGTMNKMTFCEACALGKHHALPFSHSLTHYTHPLQIISCDLWGPAINVS 433
VK VLNHID+SS K C +LG+
Sbjct: 220 VKAVLNHIDHSS-AFQKFKTCVEKSLGQ-------------------------------- 279
Query: 434 HNCFSYYISFVDAYSRYTWIYFLYSKPDAFLTFQNSKPVLQTDGGTEFKPFKPFLDQHGI 493
S LQTDGGTEFKPFKPFLDQHGI
Sbjct: 280 -----------------------------------SIKSLQTDGGTEFKPFKPFLDQHGI 339
Query: 494 KHRITCPYTSKQNDIVERKHRHIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTSVL 553
+HRITCPYTSKQNDIVERKHRHIMEMGLTLLSQATLPLSFWDEAF TSVYLIN LPT VL
Sbjct: 340 EHRITCPYTSKQNDIVERKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVL 399
Query: 554 DNISPLEKLSGWKPNFPSFRVFGC------------------------------KWYKCL 613
DNISPLEKL KPNFP RVFGC K YKCL
Sbjct: 400 DNISPLEKLFCRKPNFPFLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCL 459
Query: 614 ASDGRLFISKHVLFDENSFPYASFSSHSSMLKSKNVLSPPFHSIIQSSLINHNEDRRHTD 673
ASDGRLFIS+HVLFDENSFPYASF+SHSS+ KSKNVLSPP HSII SSL+NHNEDRRHTD
Sbjct: 460 ASDGRLFISRHVLFDENSFPYASFASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTD 519
Query: 674 TVSDNTDHLNPIIVYPLETGTQESSRDDGNIGGITQSLSPMEPQHQIDSGMNTQLQSTSV 733
TVSDNTD+LN IVYPLETGTQESSRDDGN GGITQS SPMEP HQ DSGMNTQLQSTS+
Sbjct: 520 TVSDNTDYLNSTIVYPLETGTQESSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSI 535
Query: 734 HLMITRSKHGIFKPKTFLIDYTQTEPCNAKEAFKHPHWKKAMEEKFEALQKNDTKS 750
H MIT+SKH IFKPK FLIDYTQTE CNAKEAF HPHWKKAMEE+FEALQKN T S
Sbjct: 580 HPMITQSKHDIFKPKAFLIDYTQTETCNAKEAFNHPHWKKAMEEEFEALQKNGTWS 535
BLAST of Pay0005361 vs. ExPASy TrEMBL
Match:
A0A5D3D3G2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00260 PE=4 SV=1)
HSP 1 Score: 489.6 bits (1259), Expect = 2.4e-134
Identity = 264/389 (67.87%), Postives = 287/389 (73.78%), Query Frame = 0
Query: 1 MSSNSSLLGVENTNASSPINQIFGSGKKISLVKPNDDSFLLWKFQILTILEAYDLEIFLE 60
MSS SSLLGVENT ASSPINQIFGSG KISLVK NDD+FLLWKFQILT LEAYD+E FLE
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDNFLLWKFQILTALEAYDMENFLE 60
Query: 61 SESEPPSKYLTSTGSSSTSATRTPNPEYKVWKRQDRLISSWILGSMTLINKSVSSDDHIL 120
SESEPP+KYLTSTGSSSTSATRTPNPEYK + + +LIS L S+ ++ ++
Sbjct: 61 SESEPPTKYLTSTGSSSTSATRTPNPEYKESQNESKLISETALPSVNIVTQTTEKG---- 120
Query: 121 YILAGLGSDYQSMISVISKKNLLSFCTRSYVFITYSRMNNQH--NQRGGRGNGRSNRGGR 180
SY+ + + +N H NQRGGRGNGRSN GGR
Sbjct: 121 --------------------------AESYIRTSQNNYHNNHSYNQRGGRGNGRSNSGGR 180
Query: 181 GNRNKPQCQICTKHRHNMSAMVASPDLNIDNNWYPDSGATNHLTH----------IRGGI 240
GNRNKPQCQICTK H + D+NWYPDSGATNHLTH GG
Sbjct: 181 GNRNKPQCQICTKLGH-----------SADSNWYPDSGATNHLTHSLSNLSTGSEYGGGN 240
Query: 241 QIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFFHVPFITKNLISVSQFAKDNHVFFE 300
QIY ANG GLPITHYGSMSFNSS LPFKSFTL N HVP ITKNLISVS FAKDNHVFFE
Sbjct: 241 QIYTANGSGLPITHYGSMSFNSSTLPFKSFTLKNLLHVPSITKNLISVSLFAKDNHVFFE 300
Query: 301 FHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSELNTKSVFNTVVPKSNSHL 360
FHPTLCYVKDLD GQVLLQGLLNDGLYKFTIQPSHKRLH+S+ NTKSVFNTVVPKSN+ L
Sbjct: 301 FHPTLCYVKDLDNGQVLLQGLLNDGLYKFTIQPSHKRLHNSDPNTKSVFNTVVPKSNTPL 348
Query: 361 LDLSHRRLGHPHLPTVKDVLNHIDYSSGT 378
+DL HRRLGHPHLPTVK VL H+D+SSGT
Sbjct: 361 IDLWHRRLGHPHLPTVKAVLKHVDHSSGT 348
BLAST of Pay0005361 vs. ExPASy TrEMBL
Match:
A0A438EA49 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2917 PE=4 SV=1)
HSP 1 Score: 463.4 bits (1191), Expect = 1.8e-126
Identity = 339/966 (35.09%), Postives = 450/966 (46.58%), Query Frame = 0
Query: 13 TNASSPINQIFGSGKKISLVKPNDDSFLLWKFQILTILEAYDLEIFLESESEPPSKYLTS 72
T + + ++ ++ DD+FL+WK+QI + Y LE FL + P K +T
Sbjct: 26 TTTDESLRMVISPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVT- 85
Query: 73 TGSSSTSATRTPNPEYKVWKRQDRLISSWILGS--------------------------- 132
PNP+++ ++RQD L+ SW+L S
Sbjct: 86 ----DKIGVLVPNPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFEDGLTMRDYLT 145
Query: 133 --------MTLINKSVSSDDHILYILAGLGSDYQSMISVISKKN---LLSFCTRSYV--- 192
+ +S DHIL I+ GLG +Y+S+I+VIS K L + T + +
Sbjct: 146 KMKNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQYVTSTLIAHE 205
Query: 193 ------------FITY-SRMNNQ------------------HNQRGG----RGNGRSNRG 252
+ Y S+ +N+ NQ GG RG+ NRG
Sbjct: 206 GRIAHKISSNDLSVNYTSQYSNRGPSSSWNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRG 265
Query: 253 -GRGNRN---KPQCQICTKHRH-------------------------------------- 312
GRG KPQCQ+C K H
Sbjct: 266 RGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGS 325
Query: 313 ---------------------NMSAMVASPDLNIDNNWYPDSGATNHLTH---------- 372
M AMVA+P+ + W+PDSGATNH+TH
Sbjct: 326 ISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAE 385
Query: 373 IRGGIQIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFFHVPFITKNLISVSQFAKDN 432
G +I+ NG GL I+H G F SS P K L N VP I KNL+SVSQFA+DN
Sbjct: 386 YNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQFARDN 445
Query: 433 HVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIQP-----------SHKRLHHSELN 492
+V+FEFHP +C+VKD +LLQG L+ GLY+F + S+ + + N
Sbjct: 446 NVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCN 505
Query: 493 TKSVFN---TVVPKSNS--HLLDLSHRRLGHPHLPTVKDVLNHIDYSSGTMNKMTFCEAC 552
V N K+NS H+ DL H+RLGHP V VLN T + + C AC
Sbjct: 506 ASLVHNDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSAC 565
Query: 553 ALGKHHALPFSHSLTHYTHPLQIISCDLWGPA-INVSHNCFSYYISFVDAYSRYTWIYFL 612
LGK H LPF S T YT PLQ++ DLWGPA IN S+ F+YY+SFVDAYSRYTW+YFL
Sbjct: 566 QLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYG-FTYYVSFVDAYSRYTWVYFL 625
Query: 613 YSKP---DAFLTFQNSKPV--------LQTDGGTEFKPFKPFLDQHGIKHRITCPYTSKQ 672
+K +AFL F+ + QTD G EF+ K + +Q+GI HR++CP+TSKQ
Sbjct: 626 KTKSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQ 685
Query: 673 NDIVERKHRHIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTSVLDNISPLEKLSGW 732
N I+ERKHRHI+E+GLTLL+QA+LPL +W +AFST+V+LIN LPT VL P E L
Sbjct: 686 NGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNS 745
Query: 733 KPNFPSFRVFGC------------------------------KWYKCLASDGRLFISKHV 750
KPN+ +VFGC K YKCL GR+FIS+ V
Sbjct: 746 KPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSV 805
BLAST of Pay0005361 vs. NCBI nr
Match:
TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 599/889 (67.38%), Postives = 628/889 (70.64%), Query Frame = 0
Query: 1 MSSNSSLLGVENTNASSPINQIFGSGKKISLVKPNDDSFLLWKFQILTILEAYDLEIFLE 60
MSS SSLLGVENT ASSPINQIFGSG KISLVK NDD+FLLWKFQILT LEAYDLE FLE
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60
Query: 61 SESEPPSKYLTSTGSSSTSATRTPNPEYKVWKRQDRLISSWILGSMT------------- 120
SESEPPSKYL ST SSS SAT TPNP YKVWKRQDRLISSW+LGSM+
Sbjct: 61 SESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSA 120
Query: 121 ---------------------------------------------------LINKSVSSD 180
INK VSSD
Sbjct: 121 KEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSD 180
Query: 181 DHILYILAGLGSDYQSMISVISKK---------------------------------NLL 240
DHILYILAGLGSDYQSMISVIS + N++
Sbjct: 181 DHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIV 240
Query: 241 SFCT----RSYVFITYSRMNNQH--NQRGGRGNGRSNRGGRGNRNKPQCQICTK------ 300
+ T SY+ + +N H NQRGGRGNGRSNRG RGNRNKPQCQIC K
Sbjct: 241 TQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSAD 300
Query: 301 -----------------HRHN-----------MSAMVASPDLNIDNNWYPDSGATNHLTH 360
+ HN MSAMVA+ DLNID+NWYPDSGATNHLTH
Sbjct: 301 RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTH 360
Query: 361 ----------IRGGIQIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFFHVPFITKNL 420
GG QIYAANG GLPITHYGSMSFNSS LPFKSFTLNN VP ITKNL
Sbjct: 361 SLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNL 420
Query: 421 ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSELNT 480
ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTI+PSHKRLHHS NT
Sbjct: 421 ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNT 480
Query: 481 KSVFNTVVPKSNSHLLDLSHRRLGHPHLPTVKDVLNHIDYSSGTMNKMTFCEACALGKHH 540
K VFNTVVPKSN+ LLDL HRRLGHPHLP VK VLNHID SSGT+NK+ FCEACALGKHH
Sbjct: 481 KPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHH 540
Query: 541 ALPFSHSLTHYTHPLQIISCDLWGPAINVSHNCFSYYISFVDAYSRYTWIYFLYSKPDAF 600
ALPFSHSLT YTHPLQ+I+CDLWGPA+NVSHN F YYISFVDAYSRYTWIYFL SK DAF
Sbjct: 541 ALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF 600
Query: 601 LTFQNSKPV-----------LQTDGGTEFKPFKPFLDQHGIKHRITCPYTSKQNDIVERK 660
L FQ K LQTDGGTEFKPFKPFLDQHGI+HRITCPYTSKQNDIVERK
Sbjct: 601 LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERK 660
Query: 661 HRHIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTSVLDNISPLEKLSGWKPNFPSF 702
HR+IMEMGLTLLSQATLPLSFWDEAFSTSVYLIN LPT VLDNISPLEKL KPNFPS
Sbjct: 661 HRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSL 720
BLAST of Pay0005361 vs. NCBI nr
Match:
KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 1087.0 bits (2810), Expect = 0.0e+00
Identity = 599/889 (67.38%), Postives = 627/889 (70.53%), Query Frame = 0
Query: 1 MSSNSSLLGVENTNASSPINQIFGSGKKISLVKPNDDSFLLWKFQILTILEAYDLEIFLE 60
MSS SSLLGVENT ASSPINQIFGSG KISLVK NDD+FLLWKFQILT LEAYDLE FLE
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60
Query: 61 SESEPPSKYLTSTGSSSTSATRTPNPEYKVWKRQDRLISSWILGSMT------------- 120
SESEPPSKYL ST SSS SAT TPNP YKVWKRQDRLISSW+LGSM+
Sbjct: 61 SESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSA 120
Query: 121 ---------------------------------------------------LINKSVSSD 180
INK VSSD
Sbjct: 121 KEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSD 180
Query: 181 DHILYILAGLGSDYQSMISVISKK---------------------------------NLL 240
DHILYILAGLGSDYQSMISVIS + N++
Sbjct: 181 DHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIV 240
Query: 241 SFCT----RSYVFITYSRMNNQH--NQRGGRGNGRSNRGGRGNRNKPQCQICTK------ 300
+ T SY+ + +N H NQRGGRGNGRSNRG RGNRNKPQCQIC K
Sbjct: 241 TQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSAD 300
Query: 301 -----------------HRHN-----------MSAMVASPDLNIDNNWYPDSGATNHLTH 360
+ HN MSAMVA+ DLNID+NWYPDSGATNHLTH
Sbjct: 301 RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTH 360
Query: 361 ----------IRGGIQIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFFHVPFITKNL 420
GG QIYAANG GLPITHYGSMSFNSS LPFKSFTLNN VP ITKNL
Sbjct: 361 SLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNL 420
Query: 421 ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSELNT 480
ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTI+PSHKRLHHS NT
Sbjct: 421 ISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNT 480
Query: 481 KSVFNTVVPKSNSHLLDLSHRRLGHPHLPTVKDVLNHIDYSSGTMNKMTFCEACALGKHH 540
K VFNTVVPKSN+ LLDL HRRLGHPHLP VK VLNHID SSGT+NK+ FCEACALGKHH
Sbjct: 481 KPVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHH 540
Query: 541 ALPFSHSLTHYTHPLQIISCDLWGPAINVSHNCFSYYISFVDAYSRYTWIYFLYSKPDAF 600
ALPFSHSLT YTHPLQ+I+CDLWGPA+NVSHN F YYISFVDAYSRYTWIYFL SK DAF
Sbjct: 541 ALPFSHSLTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF 600
Query: 601 LTFQNSKPV-----------LQTDGGTEFKPFKPFLDQHGIKHRITCPYTSKQNDIVERK 660
L FQ K LQTDGGTEFKPFKPFLDQHGI+HRITCPYTSKQNDIVERK
Sbjct: 601 LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERK 660
Query: 661 HRHIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTSVLDNISPLEKLSGWKPNFPSF 702
HR+IMEMGLTLLSQATLPLSFWDEAFSTSVYLIN LPT VLDNISPLEKL KPNFPS
Sbjct: 661 HRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSL 720
BLAST of Pay0005361 vs. NCBI nr
Match:
KAA0067212.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])
HSP 1 Score: 717.6 bits (1851), Expect = 1.1e-202
Identity = 391/596 (65.60%), Postives = 407/596 (68.29%), Query Frame = 0
Query: 194 HNMSAMVASPDLNIDNNWYPDSGATNHLTH----------IRGGIQIYAANGLGLPITHY 253
H MSAMVA+PDLNID+NWYPDSGATNHLTH GG QIYAANG GLPITHY
Sbjct: 40 HQMSAMVATPDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHY 99
Query: 254 GSMSFNSSILPFKSFTLNNFFHVPFITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQ 313
GSMSFNSS LPFKSFTLNN H DLDTGQ
Sbjct: 100 GSMSFNSSTLPFKSFTLNNLLH--------------------------------DLDTGQ 159
Query: 314 VLLQGLLNDGLYKFTIQPSHKRLHHSELNTKSVFNTVVPKSNSHLLDLSHRRLGHPHLPT 373
VLLQGLLNDGLYKFTIQPSHKRLHHS+ NTKSVFNTVVPKSN+ LLDL HRRLGHPHLPT
Sbjct: 160 VLLQGLLNDGLYKFTIQPSHKRLHHSDSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPT 219
Query: 374 VKDVLNHIDYSSGTMNKMTFCEACALGKHHALPFSHSLTHYTHPLQIISCDLWGPAINVS 433
VK VLNHID+SS K C +LG+
Sbjct: 220 VKAVLNHIDHSS-AFQKFKTCVEKSLGQ-------------------------------- 279
Query: 434 HNCFSYYISFVDAYSRYTWIYFLYSKPDAFLTFQNSKPVLQTDGGTEFKPFKPFLDQHGI 493
S LQTDGGTEFKPFKPFLDQHGI
Sbjct: 280 -----------------------------------SIKSLQTDGGTEFKPFKPFLDQHGI 339
Query: 494 KHRITCPYTSKQNDIVERKHRHIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTSVL 553
+HRITCPYTSKQNDIVERKHRHIMEMGLTLLSQATLPLSFWDEAF TSVYLIN LPT VL
Sbjct: 340 EHRITCPYTSKQNDIVERKHRHIMEMGLTLLSQATLPLSFWDEAFFTSVYLINLLPTPVL 399
Query: 554 DNISPLEKLSGWKPNFPSFRVFGC------------------------------KWYKCL 613
DNISPLEKL KPNFP RVFGC K YKCL
Sbjct: 400 DNISPLEKLFCRKPNFPFLRVFGCKCYPYFRPYQSHKLSLRSTPCTFLGYSTSHKGYKCL 459
Query: 614 ASDGRLFISKHVLFDENSFPYASFSSHSSMLKSKNVLSPPFHSIIQSSLINHNEDRRHTD 673
ASDGRLFIS+HVLFDENSFPYASF+SHSS+ KSKNVLSPP HSII SSL+NHNEDRRHTD
Sbjct: 460 ASDGRLFISRHVLFDENSFPYASFASHSSIPKSKNVLSPPLHSIIPSSLMNHNEDRRHTD 519
Query: 674 TVSDNTDHLNPIIVYPLETGTQESSRDDGNIGGITQSLSPMEPQHQIDSGMNTQLQSTSV 733
TVSDNTD+LN IVYPLETGTQESSRDDGN GGITQS SPMEP HQ DSGMNTQLQSTS+
Sbjct: 520 TVSDNTDYLNSTIVYPLETGTQESSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSI 535
Query: 734 HLMITRSKHGIFKPKTFLIDYTQTEPCNAKEAFKHPHWKKAMEEKFEALQKNDTKS 750
H MIT+SKH IFKPK FLIDYTQTE CNAKEAF HPHWKKAMEE+FEALQKN T S
Sbjct: 580 HPMITQSKHDIFKPKAFLIDYTQTETCNAKEAFNHPHWKKAMEEEFEALQKNGTWS 535
BLAST of Pay0005361 vs. NCBI nr
Match:
KAA0068024.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK18104.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 489.6 bits (1259), Expect = 4.9e-134
Identity = 264/389 (67.87%), Postives = 287/389 (73.78%), Query Frame = 0
Query: 1 MSSNSSLLGVENTNASSPINQIFGSGKKISLVKPNDDSFLLWKFQILTILEAYDLEIFLE 60
MSS SSLLGVENT ASSPINQIFGSG KISLVK NDD+FLLWKFQILT LEAYD+E FLE
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDNFLLWKFQILTALEAYDMENFLE 60
Query: 61 SESEPPSKYLTSTGSSSTSATRTPNPEYKVWKRQDRLISSWILGSMTLINKSVSSDDHIL 120
SESEPP+KYLTSTGSSSTSATRTPNPEYK + + +LIS L S+ ++ ++
Sbjct: 61 SESEPPTKYLTSTGSSSTSATRTPNPEYKESQNESKLISETALPSVNIVTQTTEKG---- 120
Query: 121 YILAGLGSDYQSMISVISKKNLLSFCTRSYVFITYSRMNNQH--NQRGGRGNGRSNRGGR 180
SY+ + + +N H NQRGGRGNGRSN GGR
Sbjct: 121 --------------------------AESYIRTSQNNYHNNHSYNQRGGRGNGRSNSGGR 180
Query: 181 GNRNKPQCQICTKHRHNMSAMVASPDLNIDNNWYPDSGATNHLTH----------IRGGI 240
GNRNKPQCQICTK H + D+NWYPDSGATNHLTH GG
Sbjct: 181 GNRNKPQCQICTKLGH-----------SADSNWYPDSGATNHLTHSLSNLSTGSEYGGGN 240
Query: 241 QIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFFHVPFITKNLISVSQFAKDNHVFFE 300
QIY ANG GLPITHYGSMSFNSS LPFKSFTL N HVP ITKNLISVS FAKDNHVFFE
Sbjct: 241 QIYTANGSGLPITHYGSMSFNSSTLPFKSFTLKNLLHVPSITKNLISVSLFAKDNHVFFE 300
Query: 301 FHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSELNTKSVFNTVVPKSNSHL 360
FHPTLCYVKDLD GQVLLQGLLNDGLYKFTIQPSHKRLH+S+ NTKSVFNTVVPKSN+ L
Sbjct: 301 FHPTLCYVKDLDNGQVLLQGLLNDGLYKFTIQPSHKRLHNSDPNTKSVFNTVVPKSNTPL 348
Query: 361 LDLSHRRLGHPHLPTVKDVLNHIDYSSGT 378
+DL HRRLGHPHLPTVK VL H+D+SSGT
Sbjct: 361 IDLWHRRLGHPHLPTVKAVLKHVDHSSGT 348
BLAST of Pay0005361 vs. NCBI nr
Match:
RVW44519.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 463.4 bits (1191), Expect = 3.8e-126
Identity = 339/966 (35.09%), Postives = 450/966 (46.58%), Query Frame = 0
Query: 13 TNASSPINQIFGSGKKISLVKPNDDSFLLWKFQILTILEAYDLEIFLESESEPPSKYLTS 72
T + + ++ ++ DD+FL+WK+QI + Y LE FL + P K +T
Sbjct: 26 TTTDESLRMVISPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVT- 85
Query: 73 TGSSSTSATRTPNPEYKVWKRQDRLISSWILGS--------------------------- 132
PNP+++ ++RQD L+ SW+L S
Sbjct: 86 ----DKIGVLVPNPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFEDGLTMRDYLT 145
Query: 133 --------MTLINKSVSSDDHILYILAGLGSDYQSMISVISKKN---LLSFCTRSYV--- 192
+ +S DHIL I+ GLG +Y+S+I+VIS K L + T + +
Sbjct: 146 KMKNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQYVTSTLIAHE 205
Query: 193 ------------FITY-SRMNNQ------------------HNQRGG----RGNGRSNRG 252
+ Y S+ +N+ NQ GG RG+ NRG
Sbjct: 206 GRIAHKISSNDLSVNYTSQYSNRGPSSSWNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRG 265
Query: 253 -GRGNRN---KPQCQICTKHRH-------------------------------------- 312
GRG KPQCQ+C K H
Sbjct: 266 RGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGS 325
Query: 313 ---------------------NMSAMVASPDLNIDNNWYPDSGATNHLTH---------- 372
M AMVA+P+ + W+PDSGATNH+TH
Sbjct: 326 ISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAE 385
Query: 373 IRGGIQIYAANGLGLPITHYGSMSFNSSILPFKSFTLNNFFHVPFITKNLISVSQFAKDN 432
G +I+ NG GL I+H G F SS P K L N VP I KNL+SVSQFA+DN
Sbjct: 386 YNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQFARDN 445
Query: 433 HVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIQP-----------SHKRLHHSELN 492
+V+FEFHP +C+VKD +LLQG L+ GLY+F + S+ + + N
Sbjct: 446 NVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCN 505
Query: 493 TKSVFN---TVVPKSNS--HLLDLSHRRLGHPHLPTVKDVLNHIDYSSGTMNKMTFCEAC 552
V N K+NS H+ DL H+RLGHP V VLN T + + C AC
Sbjct: 506 ASLVHNDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSAC 565
Query: 553 ALGKHHALPFSHSLTHYTHPLQIISCDLWGPA-INVSHNCFSYYISFVDAYSRYTWIYFL 612
LGK H LPF S T YT PLQ++ DLWGPA IN S+ F+YY+SFVDAYSRYTW+YFL
Sbjct: 566 QLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYG-FTYYVSFVDAYSRYTWVYFL 625
Query: 613 YSKP---DAFLTFQNSKPV--------LQTDGGTEFKPFKPFLDQHGIKHRITCPYTSKQ 672
+K +AFL F+ + QTD G EF+ K + +Q+GI HR++CP+TSKQ
Sbjct: 626 KTKSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQ 685
Query: 673 NDIVERKHRHIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTSVLDNISPLEKLSGW 732
N I+ERKHRHI+E+GLTLL+QA+LPL +W +AFST+V+LIN LPT VL P E L
Sbjct: 686 NGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNS 745
Query: 733 KPNFPSFRVFGC------------------------------KWYKCLASDGRLFISKHV 750
KPN+ +VFGC K YKCL GR+FIS+ V
Sbjct: 746 KPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSV 805
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9ZT94 | 1.3e-73 | 30.09 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 1.6e-71 | 28.67 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P10978 | 1.4e-30 | 24.14 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 8.1e-23 | 25.88 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P0C2I5 | 8.1e-15 | 25.07 | Transposon Ty1-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CH97 | 0.0e+00 | 67.38 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7U233 | 0.0e+00 | 67.38 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7VFQ6 | 5.3e-203 | 65.60 | Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw... | [more] |
A0A5D3D3G2 | 2.4e-134 | 67.87 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A438EA49 | 1.8e-126 | 35.09 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
Match Name | E-value | Identity | Description | |
TYK10642.1 | 0.0e+00 | 67.38 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0048297.1 | 0.0e+00 | 67.38 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0067212.1 | 1.1e-202 | 65.60 | retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | [more] |
KAA0068024.1 | 4.9e-134 | 67.87 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
RVW44519.1 | 3.8e-126 | 35.09 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |