Pay0002013 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTGCTCTCTTCCTGTCTGCCTCTCTAATTCTCATCTTGCTTATTCATTAAATTAAGAAAACATCTCGTACTAGCTAATTGACTTCCAAATGCTCTCTGATTGATGATCACATATAAATCTCCTCTCAACAAATCTTATCTTTCTTTCTTCCTACCCACATAGCATACCATGTCATTGGCTTCCGAAGCCGGCCAACAAGATTCAAGCAAGCAACCCCACTTCCCCACGGTGGCAATTCAAGCCTTCGACCTATGCCAACTGATGATTGTACTATCATAGCTCTTTCGAGTCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGAAACACAGACGGGGATGGAGACAAGGGGGTTGGCAATGGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCAATGGAAGGAGGAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCATTTCACATCACTCTGGTGTTTTATGTAGCTCCCACTTTCTTGGATTTGTGTAATACTCACTCTCTAATAAGCTTTCAAGCTTTGTGCAAAAGGCGCTAA ATTGCTCTCTTCCTGTCTGCCTCTCTAATTCTCATCTTGCTTATTCATTAAATTAAGAAAACATCTCGTACTAGCTAATTGACTTCCAAATGCTCTCTGATTGATGATCACATATAAATCTCCTCTCAACAAATCTTATCTTTCTTTCTTCCTACCCACATAGCATACCATGTCATTGGCTTCCGAAGCCGGCCAACAAGATTCAAGCAAGCAACCCCACTTCCCCACGGTGGCAATTCAAGCCTTCGACCTATGCCAACTGATGATTGTACTATCATAGCTCTTTCGAGTCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGAAACACAGACGGGGATGGAGACAAGGGGGTTGGCAATGGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCAATGGAAGGAGGAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCATTTCACATCACTCTGGTGTTTTATGTAGCTCCCACTTTCTTGGATTTGTGTAATACTCACTCTCTAATAAGCTTTCAAGCTTTGTGCAAAAGGCGCTAA ATGCCAACTGATGATTGTACTATCATAGCTCTTTCGAGTCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGAAACACAGACGGGGATGGAGACAAGGGGGTTGGCAATGGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCAATGGAAGGAGGAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCATTTCACATCACTCTGGTGTTTTATGTAGCTCCCACTTTCTTGGATTTGTGTAATACTCACTCTCTAATAAGCTTTCAAGCTTTGTGCAAAAGGCGCTAA MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHITLVFYVAPTFLDLCNTHSLISFQALCKRR Homology
BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.6e-09 Identity = 28/77 (36.36%), Postives = 39/77 (50.65%), Query Frame = 0
BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.0e-09 Identity = 27/77 (35.06%), Postives = 39/77 (50.65%), Query Frame = 0
BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08 Identity = 27/77 (35.06%), Postives = 39/77 (50.65%), Query Frame = 0
BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: F4HZZ5 (Receptor homology region, transmembrane domain- and RING domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=RMR5 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.3e-08 Identity = 27/94 (28.72%), Postives = 44/94 (46.81%), Query Frame = 0
BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: F4HZZ4 (Receptor homology region, transmembrane domain- and RING domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=RMR6 PE=3 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 3.0e-08 Identity = 28/94 (29.79%), Postives = 44/94 (46.81%), Query Frame = 0
BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A5D3CJ45 (E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00530 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 7.2e-58 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A0A0L4W7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50 Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A6J1CW69 (E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC111014786 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 3.9e-27 Identity = 69/102 (67.65%), Postives = 74/102 (72.55%), Query Frame = 0
BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A7N2R4T7 (RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 7.0e-21 Identity = 51/94 (54.26%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A2I4FD42 (E3 ubiquitin-protein ligase RNF165-like OS=Juglans regia OX=51240 GN=LOC108997662 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 7.0e-21 Identity = 49/89 (55.06%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of Pay0002013 vs. NCBI nr
Match: KAA0052944.1 (E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa]) HSP 1 Score: 233.0 bits (593), Expect = 1.5e-57 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Pay0002013 vs. NCBI nr
Match: KAE8649999.1 (hypothetical protein Csa_010276, partial [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 3.0e-50 Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of Pay0002013 vs. NCBI nr
Match: XP_038906276.1 (E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]) HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46 Identity = 90/102 (88.24%), Postives = 92/102 (90.20%), Query Frame = 0
BLAST of Pay0002013 vs. NCBI nr
Match: KAG6577791.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 167.2 bits (422), Expect = 1.0e-37 Identity = 79/105 (75.24%), Postives = 87/105 (82.86%), Query Frame = 0
BLAST of Pay0002013 vs. NCBI nr
Match: KAG7015830.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 165.6 bits (418), Expect = 2.9e-37 Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Pay0002013 vs. TAIR 10
Match: AT3G51325.1 (RING/U-box superfamily protein ) HSP 1 Score: 68.9 bits (167), Expect = 3.5e-12 Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 0
BLAST of Pay0002013 vs. TAIR 10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein ) HSP 1 Score: 60.1 bits (144), Expect = 1.6e-09 Identity = 27/94 (28.72%), Postives = 44/94 (46.81%), Query Frame = 0
BLAST of Pay0002013 vs. TAIR 10
Match: AT1G35625.1 (RING/U-box superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-09 Identity = 28/94 (29.79%), Postives = 44/94 (46.81%), Query Frame = 0
BLAST of Pay0002013 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.5e-07 Identity = 24/70 (34.29%), Postives = 33/70 (47.14%), Query Frame = 0
BLAST of Pay0002013 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein ) HSP 1 Score: 52.0 bits (123), Expect = 4.4e-07 Identity = 27/82 (32.93%), Postives = 40/82 (48.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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