Pay0002013 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002013
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RING-type domain-containing protein
Location	chr06: 35659643 .. 35660302 (+)
RNA-Seq Expression	Pay0002013
Synteny	Pay0002013

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCTCTCTTCCTGTCTGCCTCTCTAATTCTCATCTTGCTTATTCATTAAATTAAGAAAACATCTCGTACTAGCTAATTGACTTCCAAATGCTCTCTGATTGATGATCACATATAAATCTCCTCTCAACAAATCTTATCTTTCTTTCTTCCTACCCACATAGCATACCATGTCATTGGCTTCCGAAGCCGGCCAACAAGATTCAAGCAAGCAACCCCACTTCCCCACGGTGGCAATTCAAGCCTTCGACCTATGCCAACTGATGATTGTACTATCATAGCTCTTTCGAGTCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGAAACACAGACGGGGATGGAGACAAGGGGGTTGGCAATGGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCAATGGAAGGAGGAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCATTTCACATCACTCTGGTGTTTTATGTAGCTCCCACTTTCTTGGATTTGTGTAATACTCACTCTCTAATAAGCTTTCAAGCTTTGTGCAAAAGGCGCTAA

mRNA sequence

ATTGCTCTCTTCCTGTCTGCCTCTCTAATTCTCATCTTGCTTATTCATTAAATTAAGAAAACATCTCGTACTAGCTAATTGACTTCCAAATGCTCTCTGATTGATGATCACATATAAATCTCCTCTCAACAAATCTTATCTTTCTTTCTTCCTACCCACATAGCATACCATGTCATTGGCTTCCGAAGCCGGCCAACAAGATTCAAGCAAGCAACCCCACTTCCCCACGGTGGCAATTCAAGCCTTCGACCTATGCCAACTGATGATTGTACTATCATAGCTCTTTCGAGTCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGAAACACAGACGGGGATGGAGACAAGGGGGTTGGCAATGGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCAATGGAAGGAGGAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCATTTCACATCACTCTGGTGTTTTATGTAGCTCCCACTTTCTTGGATTTGTGTAATACTCACTCTCTAATAAGCTTTCAAGCTTTGTGCAAAAGGCGCTAA

Coding sequence (CDS)

ATGCCAACTGATGATTGTACTATCATAGCTCTTTCGAGTCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGAAACACAGACGGGGATGGAGACAAGGGGGTTGGCAATGGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGAACGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCAATGGAAGGAGGAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCATTTCACATCACTCTGGTGTTTTATGTAGCTCCCACTTTCTTGGATTTGTGTAATACTCACTCTCTAATAAGCTTTCAAGCTTTGTGCAAAAGGCGCTAA

Protein sequence

MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHITLVFYVAPTFLDLCNTHSLISFQALCKRR

Homology

[Close]

BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.6e-09
Identity = 28/77 (36.36%), Postives = 39/77 (50.65%), Query Frame = 0


Query: 15  EKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICR 74
           +K  E + C +CL        DGDK       VLPC H +H  CV+ W  + R+TCPIC+
Sbjct: 222 QKGDEYDVCAICLDEY----EDGDK-----LRVLPCAHAYHSRCVDPWLTQTRKTCPICK 281

Query: 75  YSMEGGGGGSHEDETNQ 92
             +  G G   ++E  Q
Sbjct: 282 QPVHRGPGDEEQEEETQ 289

[Close]

BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.0e-09
Identity = 27/77 (35.06%), Postives = 39/77 (50.65%), Query Frame = 0


Query: 15  EKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICR 74
           +K  E + C +CL        DGDK       +LPC H +H  CV+ W  + R+TCPIC+
Sbjct: 222 QKGDEYDVCAICLDEY----EDGDK-----LRILPCAHAYHSRCVDPWLTQTRKTCPICK 281

Query: 75  YSMEGGGGGSHEDETNQ 92
             +  G G   ++E  Q
Sbjct: 282 QPVHRGPGDEEQEEETQ 289

[Close]

BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08
Identity = 27/77 (35.06%), Postives = 39/77 (50.65%), Query Frame = 0


Query: 15  EKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICR 74
           +K  + + C +CL        DGDK       VLPC H +H  CV+ W  + R+TCPIC+
Sbjct: 222 QKGDQYDVCAICLDEY----EDGDK-----LRVLPCAHAYHSRCVDPWLTQTRKTCPICK 281

Query: 75  YSMEGGGGGSHEDETNQ 92
             +  G G   ++E  Q
Sbjct: 282 QPVHRGPGDEDQEEETQ 289

[Close]

BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: F4HZZ5 (Receptor homology region, transmembrane domain- and RING domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=RMR5 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-08
Identity = 27/94 (28.72%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 1   MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 60
           MPT+    +    LE++    TC +C+          D  VG    +LPC H++H VC++
Sbjct: 215 MPTE----VYSGVLEESSTSVTCAICID---------DYCVGEKLRILPCKHKYHAVCID 274

Query: 61  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILT 95
            W   CR  CP+C+ +   G       ET  +++
Sbjct: 275 SWLGRCRSFCPVCKQNPRTGNDVPPASETTPLIS 295

[Close]

BLAST of Pay0002013 vs. ExPASy Swiss-Prot
Match: F4HZZ4 (Receptor homology region, transmembrane domain- and RING domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=RMR6 PE=3 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-08
Identity = 28/94 (29.79%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 1   MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 60
           MPT+  T +    LE+     TC +C+          D  VG    +LPC H++H VC++
Sbjct: 215 MPTEVYTGV----LEEGSTSVTCAICID---------DYRVGEILRILPCKHKYHAVCID 274

Query: 61  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILT 95
            W   CR  CP+C+ +   G       ET  +++
Sbjct: 275 SWLGRCRSFCPVCKQNPRTGNDVPPASETTPLIS 295

[Close]

BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A5D3CJ45 (E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00530 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 7.2e-58
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 60
           MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
Sbjct: 41  MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 100

Query: 61  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 106
           RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH
Sbjct: 101 RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 145

[Close]

BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A0A0L4W7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50
Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 60
           +PTDDCTI+ALSSLEKALEGETCCVCLSSMGNTD DGDKGV  GTSVLPCLHEFHKVCVE
Sbjct: 40  LPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGV--GTSVLPCLHEFHKVCVE 99

Query: 61  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 106
           RWFEECRRTCPICRYSME  GGGSHEDETNQILTDEMVIWFSSFH
Sbjct: 100 RWFEECRRTCPICRYSME--GGGSHEDETNQILTDEMVIWFSSFH 140

[Close]

BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A6J1CW69 (E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC111014786 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.9e-27
Identity = 69/102 (67.65%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 5   DCTIIALSSLEKALEGE-TCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWF 64
           DC  + LSS  KALEGE  CCVCLSS+           G  TSVLPCLHEFHKVCV+RWF
Sbjct: 48  DC--VTLSSSGKALEGEMCCCVCLSSIEE---------GIETSVLPCLHEFHKVCVDRWF 107

Query: 65  EECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 106
           EE RRTCPICRYSMEG G G+  +   QILTDEMVIWFSSFH
Sbjct: 108 EERRRTCPICRYSMEGAGQGN--ENGTQILTDEMVIWFSSFH 136

[Close]

BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A7N2R4T7 (RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 7.0e-21
Identity = 51/94 (54.26%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 14  LEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEE-CRRTCPI 73
           +E  +EGE CCVCLS +        K        LPCLHEFHK+CV+RWF   CR+TCP+
Sbjct: 48  VEVEVEGEVCCVCLSRL--------KKGQEEMRTLPCLHEFHKICVDRWFNHVCRKTCPV 107

Query: 74  CRYSMEGGGGGSHEDETNQILTDEMVIWFSSFHI 107
           CR+SM    GG  +  T Q+LTDEMVIWFSSFH+
Sbjct: 108 CRFSM----GGEDKFHTQQVLTDEMVIWFSSFHV 129

[Close]

BLAST of Pay0002013 vs. ExPASy TrEMBL
Match: A0A2I4FD42 (E3 ubiquitin-protein ligase RNF165-like OS=Juglans regia OX=51240 GN=LOC108997662 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 7.0e-21
Identity = 49/89 (55.06%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 18  LEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSM 77
           LE E CCVCLS +           G  T  LPCLHEFHKVCV+RWF+ CR+TCP+CR+S+
Sbjct: 60  LEVEQCCVCLSRLKK---------GQDTRTLPCLHEFHKVCVDRWFDACRKTCPVCRFSI 119

Query: 78  EGGGGGSHEDETNQILTDEMVIWFSSFHI 107
               GG       ++LTDEMVIWFSSFH+
Sbjct: 120 ----GGEDNFHIQEVLTDEMVIWFSSFHV 135

[Close]

BLAST of Pay0002013 vs. NCBI nr
Match: KAA0052944.1 (E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 1.5e-57
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 60
           MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE
Sbjct: 41  MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 100

Query: 61  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 106
           RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH
Sbjct: 101 RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 145

[Close]

BLAST of Pay0002013 vs. NCBI nr
Match: KAE8649999.1 (hypothetical protein Csa_010276, partial [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 3.0e-50
Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 60
           +PTDDCTI+ALSSLEKALEGETCCVCLSSMGNTD DGDKGV  GTSVLPCLHEFHKVCVE
Sbjct: 35  LPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGV--GTSVLPCLHEFHKVCVE 94

Query: 61  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 106
           RWFEECRRTCPICRYSME  GGGSHEDETNQILTDEMVIWFSSFH
Sbjct: 95  RWFEECRRTCPICRYSME--GGGSHEDETNQILTDEMVIWFSSFH 135

[Close]

BLAST of Pay0002013 vs. NCBI nr
Match: XP_038906276.1 (E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46
Identity = 90/102 (88.24%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 4   DDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWF 63
           DDC I+ LSS EKALEGETCCVCLSSMGN DGD DKGVG  TSVLPCLHEFHKVCV+RWF
Sbjct: 43  DDCAIVTLSSPEKALEGETCCVCLSSMGNKDGDRDKGVGTSTSVLPCLHEFHKVCVDRWF 102

Query: 64  EECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 106
           EECRRTCPICRYSME  GGGSHED TNQILTDEMVIWFSSFH
Sbjct: 103 EECRRTCPICRYSME--GGGSHEDGTNQILTDEMVIWFSSFH 142

[Close]

BLAST of Pay0002013 vs. NCBI nr
Match: KAG6577791.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-37
Identity = 79/105 (75.24%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 1   MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 60
           M  DDC + ALSS EKALEGETCCVCLS MGN     DK  G GTSVLPC HEFHK+C++
Sbjct: 40  MTPDDC-VAALSSPEKALEGETCCVCLSCMGNK----DKDEGIGTSVLPCSHEFHKICLD 99

Query: 61  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 106
           RWFEECRRTCPICRYSME GGG +HED +N++LTDEMVIWFSSFH
Sbjct: 100 RWFEECRRTCPICRYSME-GGGNNHEDGSNEMLTDEMVIWFSSFH 138

[Close]

BLAST of Pay0002013 vs. NCBI nr
Match: KAG7015830.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.6 bits (418), Expect = 2.9e-37
Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 4   DDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWF 63
           DDC + ALSS EKALEGETCCVCLS MGN     DK  G GTSVLPC HEFHK+C++RWF
Sbjct: 43  DDC-VAALSSPEKALEGETCCVCLSCMGNK----DKDEGIGTSVLPCSHEFHKICLDRWF 102

Query: 64  EECRRTCPICRYSMEGGGGGSHEDETNQILTDEMVIWFSSFH 106
           EECRRTCPICRYSME GGG +HED +N++LTDEMVIWFSSFH
Sbjct: 103 EECRRTCPICRYSME-GGGNNHEDGSNEMLTDEMVIWFSSFH 138

[Close]

BLAST of Pay0002013 vs. TAIR 10
Match: AT3G51325.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-12
Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 0


Query: 19  EGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRR-TCPICRYSM 78
           E E C VCL  M   D             LPC HEFH +CV+ WF   R+  CP+CR+S 
Sbjct: 22  EEECCSVCLMRMEAKD---------VIKSLPCSHEFHSLCVDTWFNVSRKICCPLCRFS- 81

Query: 79  EGGGGGSHEDETNQILTDEMVIWFSSFH 106
                      T  +LTDE+++WFSSFH
Sbjct: 82  ----------PTTILLTDELLLWFSSFH 89

[Close]

BLAST of Pay0002013 vs. TAIR 10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-09
Identity = 27/94 (28.72%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 1   MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 60
           MPT+    +    LE++    TC +C+          D  VG    +LPC H++H VC++
Sbjct: 215 MPTE----VYSGVLEESSTSVTCAICID---------DYCVGEKLRILPCKHKYHAVCID 274

Query: 61  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILT 95
            W   CR  CP+C+ +   G       ET  +++
Sbjct: 275 SWLGRCRSFCPVCKQNPRTGNDVPPASETTPLIS 295

[Close]

BLAST of Pay0002013 vs. TAIR 10
Match: AT1G35625.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-09
Identity = 28/94 (29.79%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 1   MPTDDCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVE 60
           MPT+  T +    LE+     TC +C+          D  VG    +LPC H++H VC++
Sbjct: 98  MPTEVYTGV----LEEGSTSVTCAICID---------DYRVGEILRILPCKHKYHAVCID 157

Query: 61  RWFEECRRTCPICRYSMEGGGGGSHEDETNQILT 95
            W   CR  CP+C+ +   G       ET  +++
Sbjct: 158 SWLGRCRSFCPVCKQNPRTGNDVPPASETTPLIS 178

[Close]

BLAST of Pay0002013 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.5e-07
Identity = 24/70 (34.29%), Postives = 33/70 (47.14%), Query Frame = 0


Query: 5   DCTIIALSSLEKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFE 64
           D   I L +  ++ +   C +CL      D             LPC HEFHK CV++W +
Sbjct: 472 DLLPIKLYTKSQSEDPSQCYICLVEYEEAD---------SIRTLPCHHEFHKTCVDKWLK 531

Query: 65  ECRRTCPICR 75
           E  R CP+CR
Sbjct: 532 EIHRVCPLCR 532

[Close]

BLAST of Pay0002013 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 4.4e-07
Identity = 27/82 (32.93%), Postives = 40/82 (48.78%), Query Frame = 0


Query: 15  EKALEGE-TCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPIC 74
           +K  E E TC VCL  +          VG     LPCLH+FH  C++ W  + + TCP+C
Sbjct: 202 KKGTEDELTCSVCLEQV---------TVGEIVRTLPCLHQFHAGCIDPWLRQ-QGTCPVC 261

Query: 75  RYSMEGGGGGSHEDETNQILTD 96
           ++      G   +DE +   +D
Sbjct: 262 KF--RAHSGWQEQDEIDDDASD 271

The following BLAST results are available for this feature:

BLAST of Pay0002013 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91XF4	4.6e-09	36.36	E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1	[more]
Q5XIL0	6.0e-09	35.06	E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 ...	[more]
Q9H6Y7	1.3e-08	35.06	E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1	[more]
F4HZZ5	2.3e-08	28.72	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
F4HZZ4	3.0e-08	29.79	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]

BLAST of Pay0002013 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJ45	7.2e-58	100.00	E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0L4W7	1.5e-50	93.33	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 P...	[more]
A0A6J1CW69	3.9e-27	67.65	E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A7N2R4T7	7.0e-21	54.26	RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2I4FD42	7.0e-21	55.06	E3 ubiquitin-protein ligase RNF165-like OS=Juglans regia OX=51240 GN=LOC10899766...	[more]

BLAST of Pay0002013 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052944.1	1.5e-57	100.00	E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiq...	[more]
KAE8649999.1	3.0e-50	93.33	hypothetical protein Csa_010276, partial [Cucumis sativus]	[more]
XP_038906276.1	1.5e-46	88.24	E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]	[more]
KAG6577791.1	1.0e-37	75.24	Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7015830.1	2.9e-37	76.47	Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Pay0002013 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51325.1	3.5e-12	40.91	RING/U-box superfamily protein	[more]
AT1G35630.1	1.6e-09	28.72	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G35625.1	2.1e-09	29.79	RING/U-box superfamily protein	[more]
AT5G45290.1	1.5e-07	34.29	RING/U-box superfamily protein	[more]
AT3G55530.1	4.4e-07	32.93	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 23..73 e-value: 2.3E-6 score: 37.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 22..74 e-value: 6.0E-9 score: 36.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 23..74 score: 11.795887
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 10..84 e-value: 8.6E-15 score: 55.7
None	No IPR available	PANTHER	PTHR45977:SF13	GB\|AAF27103.1	coord: 13..78
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 13..78
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 15..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002013.1	Pay0002013.1	mRNA