Pay0001254 (gene) Melon (Payzawat) v1

Overview
NamePay0001254
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Locationchr02: 8480099 .. 8480976 (-)
RNA-Seq ExpressionPay0001254
SyntenyPay0001254
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCTTATCCATAAGGCTGGTTTGGAAAAAACTATCTCGAATGTTGGCCCTTTTTATCCCCAGCTAATTAGAGAATTTATCGTCAATCTTCCTGATGAGTTTAATGATCCGAGTAGTGCTGATTATCAGACGATGCACATTAGAGGGTTCAAATTTGTGATTTCACCTGCTATGATAAATGGTTTTCTTGGAACTACTGTTGATATTGACTGCTCTCCATCATGTCCTACTACTGAGGTTCTAGCTATTGTCTTATCTAGAGGGACCTTGTCCACATGACCTCAACAGCTACTCTCAGCATCAAGTATATCATTCTGCACAAGATTGGCATTGCCAATTGGTTCCCTTCCTCACATGCCTCAAGCATATCTGCTGCCTTAGGTACATTCTTGTATCAAATTTGCAATGATGATAAAGTAGATACGGGTGCCTTTATTTACAATCAACTATTGAGACATATTGGGTCGTTTGGGGTCAAGGTTCCCATTGCTTTTTCGAGGTTGTTCTCCAGTCTGCTACTTCACCTAAATGGAGTGGTGCTTACTGCATCTGATGCTTCTGGACCTGAACCTAAGACAATTGCACTAAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGTATCCAACTCAGGGCCCACGTATTTTTGACACTATTGACTGGGATGAATCTGCTGAAGGCTTCTATGTGGATCGTGAGTTAGCTACCCGCATTATTAATTCCTTGACTGCTAAATATCGTGCACTGACTAACTCCATCACTCTGTTGTCTGAACGTCGATTAGAGGTTGATGCTCTCATTCGACATTTGAAGTCTTCGACACCATCTACTAGTCGTCAGCAACCACCATCTGGTTAA

mRNA sequence

ATGGACCTTATCCATAAGGCTGGTTTGGAAAAAACTATCTCGAATGTTGGCCCTTTTTATCCCCAGCTAATTAGAGAATTTATCGTCAATCTTCCTGATGAGTTTAATGATCCGAGTAGTGCTGATTATCAGACGATGCACATTAGAGGGTTCAAATTTGTGATTTCACCTGCTATGATAAATGGTTTTCTTGGAACTACTGTTGATATTGACTGCTCTCCATCATGTCCTACTACTGAGGTTCTAGCTATTGTCTTATCTAGAGGGACCTTCATCAAGTATATCATTCTGCACAAGATTGGCATTGCCAATTGGTTCCCTTCCTCACATGCCTCAAGCATATCTGCTGCCTTAGGTACATTCTTGTATCAAATTTGCAATGATGATAAAGTAGATACGGGTGCCTTTATTTACAATCAACTATTGAGACATATTGGGTCGTTTGGGGTCAAGGTTCCCATTGCTTTTTCGAGGTTGTTCTCCAGTCTGCTACTTCACCTAAATGGAGTGGTGCTTACTGCATCTGATGCTTCTGGACCTGAACCTAAGACAATTGCACTAAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGTATCCAACTCAGGGCCCACGTATTTTTGACACTATTGACTGGGATGAATCTGCTGAAGGCTTCTATGTGGATCGTGAGTTAGCTACCCGCATTATTAATTCCTTGACTGCTAAATATCGTGCACTGACTAACTCCATCACTCTGTTGTCTGAACGTCGATTAGAGGTTGATGCTCTCATTCGACATTTGAAGTCTTCGACACCATCTACTAGTCGTCAGCAACCACCATCTGGTTAA

Coding sequence (CDS)

ATGGACCTTATCCATAAGGCTGGTTTGGAAAAAACTATCTCGAATGTTGGCCCTTTTTATCCCCAGCTAATTAGAGAATTTATCGTCAATCTTCCTGATGAGTTTAATGATCCGAGTAGTGCTGATTATCAGACGATGCACATTAGAGGGTTCAAATTTGTGATTTCACCTGCTATGATAAATGGTTTTCTTGGAACTACTGTTGATATTGACTGCTCTCCATCATGTCCTACTACTGAGGTTCTAGCTATTGTCTTATCTAGAGGGACCTTCATCAAGTATATCATTCTGCACAAGATTGGCATTGCCAATTGGTTCCCTTCCTCACATGCCTCAAGCATATCTGCTGCCTTAGGTACATTCTTGTATCAAATTTGCAATGATGATAAAGTAGATACGGGTGCCTTTATTTACAATCAACTATTGAGACATATTGGGTCGTTTGGGGTCAAGGTTCCCATTGCTTTTTCGAGGTTGTTCTCCAGTCTGCTACTTCACCTAAATGGAGTGGTGCTTACTGCATCTGATGCTTCTGGACCTGAACCTAAGACAATTGCACTAAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGTATCCAACTCAGGGCCCACGTATTTTTGACACTATTGACTGGGATGAATCTGCTGAAGGCTTCTATGTGGATCGTGAGTTAGCTACCCGCATTATTAATTCCTTGACTGCTAAATATCGTGCACTGACTAACTCCATCACTCTGTTGTCTGAACGTCGATTAGAGGTTGATGCTCTCATTCGACATTTGAAGTCTTCGACACCATCTACTAGTCGTCAGCAACCACCATCTGGTTAA

Protein sequence

MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMINGFLGTTVDIDCSPSCPTTEVLAIVLSRGTFIKYIILHKIGIANWFPSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLHLNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFYVDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSRQQPPSG
Homology
[Close]
BLAST of Pay0001254 vs. ExPASy TrEMBL
Match: A0A1S3CHW3 (uncharacterized protein LOC103501137 OS=Cucumis melo OX=3656 GN=LOC103501137 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.3e-137
Identity = 253/296 (85.47%), Postives = 262/296 (88.51%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           M+L HKAGLEKTISNVGPFYPQLIREFIVNLPD+FNDPSS +YQT+HIRGFKFVISPA+I
Sbjct: 1   MNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVI 60

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           N FLG TVDID S SCPTTEVLA VLS GT               +KY ILHKIGIANWF
Sbjct: 61  NEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSVKYAILHKIGIANWF 120

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PSSHASSISAAL TFLYQICN DKVDTGAFIYNQLL H+GSF VKVPIAF RLFSSLLLH
Sbjct: 121 PSSHASSISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLH 180

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNGVVLTASDA GPEPKTIALSYRLFQGSHVPDIDHDV+PT GPRIFDT DWDESAEGFY
Sbjct: 181 LNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFY 240

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSRQQPPSG 283
           VDRELATRIINSLTA+ RALTNSITLLSERRLEVDALIRHLKSS PSTSRQQPPSG
Sbjct: 241 VDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 296

[Close]
BLAST of Pay0001254 vs. ExPASy TrEMBL
Match: A0A5D3E001 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00270 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.3e-135
Identity = 248/296 (83.78%), Postives = 262/296 (88.51%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           M+LIHKAGL+KTISNVGPFYPQLIREFIVNLPDEFNDPSSADY T+HIRGFKFVISPA+I
Sbjct: 4   MNLIHKAGLKKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYHTVHIRGFKFVISPAVI 63

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           NGFLG TVDIDCSPSCPTT+VLA VL  GT               +KY ILHKIGIANWF
Sbjct: 64  NGFLGNTVDIDCSPSCPTTKVLANVLFGGTLSTWLVNGIPTAALSVKYAILHKIGIANWF 123

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PS HASSIS ALGTFLYQICN DKVDTGAFIYNQLLRH+GSFGVKVPIAFSRLFSSLLL+
Sbjct: 124 PSLHASSISVALGTFLYQICNSDKVDTGAFIYNQLLRHVGSFGVKVPIAFSRLFSSLLLY 183

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNG VLTASDA GPEPKTIALSYRLFQGSH+PDIDHDV+PT+GP IF+T DWD+ AEGFY
Sbjct: 184 LNGAVLTASDAPGPEPKTIALSYRLFQGSHMPDIDHDVHPTRGPCIFETTDWDDFAEGFY 243

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSRQQPPSG 283
           VDRELATRIINSLTA+  ALTNSITLLSERRLEVDALIRHLKSS  STSRQQP SG
Sbjct: 244 VDRELATRIINSLTAESHALTNSITLLSERRLEVDALIRHLKSSALSTSRQQPSSG 299

[Close]
BLAST of Pay0001254 vs. ExPASy TrEMBL
Match: A0A5A7TDT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00530 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.9e-135
Identity = 248/296 (83.78%), Postives = 257/296 (86.82%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFN+PSSADYQT+HIRGFKFVISP  I
Sbjct: 4   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNNPSSADYQTVHIRGFKFVISPTAI 63

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           NGFLG T+DIDCS SCP TEVLA VLS GT               +KY+ILHKIGIANWF
Sbjct: 64  NGFLGNTIDIDCSRSCPITEVLATVLSGGTLSTWPMNGIPAAALSVKYVILHKIGIANWF 123

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PSSHASSIS ALG FLYQICNDDKVDTGAFIYNQLLRH+GSFGVKVPIA  RLF SLLLH
Sbjct: 124 PSSHASSISVALGAFLYQICNDDKVDTGAFIYNQLLRHVGSFGVKVPIALLRLFFSLLLH 183

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNG VLTASD   PEPKTIALSYRLFQG H+PDID DV+PT GPRIFDTIDWDESAEGFY
Sbjct: 184 LNGAVLTASDTPRPEPKTIALSYRLFQGIHMPDIDPDVHPTWGPRIFDTIDWDESAEGFY 243

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSRQQPPSG 283
           VDRELAT IINSLTA+  ALTNSITLLSERRLEVDALIRHLKSS PSTSRQ PPSG
Sbjct: 244 VDRELATCIINSLTAESCALTNSITLLSERRLEVDALIRHLKSSAPSTSRQHPPSG 299

[Close]
BLAST of Pay0001254 vs. ExPASy TrEMBL
Match: A0A1S3CRT1 (uncharacterized protein LOC103504033 OS=Cucumis melo OX=3656 GN=LOC103504033 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.9e-135
Identity = 248/296 (83.78%), Postives = 257/296 (86.82%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFN+PSSADYQT+HIRGFKFVISP  I
Sbjct: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNNPSSADYQTVHIRGFKFVISPTAI 60

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           NGFLG T+DIDCS SCP TEVLA VLS GT               +KY+ILHKIGIANWF
Sbjct: 61  NGFLGNTIDIDCSRSCPITEVLATVLSGGTLSTWPMNGIPAAALSVKYVILHKIGIANWF 120

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PSSHASSIS ALG FLYQICNDDKVDTGAFIYNQLLRH+GSFGVKVPIA  RLF SLLLH
Sbjct: 121 PSSHASSISVALGAFLYQICNDDKVDTGAFIYNQLLRHVGSFGVKVPIALLRLFFSLLLH 180

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNG VLTASD   PEPKTIALSYRLFQG H+PDID DV+PT GPRIFDTIDWDESAEGFY
Sbjct: 181 LNGAVLTASDTPRPEPKTIALSYRLFQGIHMPDIDPDVHPTWGPRIFDTIDWDESAEGFY 240

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSRQQPPSG 283
           VDRELAT IINSLTA+  ALTNSITLLSERRLEVDALIRHLKSS PSTSRQ PPSG
Sbjct: 241 VDRELATCIINSLTAESCALTNSITLLSERRLEVDALIRHLKSSAPSTSRQHPPSG 296

[Close]
BLAST of Pay0001254 vs. ExPASy TrEMBL
Match: A0A5D3DQA5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2736G00070 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.2e-133
Identity = 242/290 (83.45%), Postives = 257/290 (88.62%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           MD IHKAGL+KTISNVGPFYPQLI+EFIVNLPDEFNDPSS DYQ++HIRGFKFV+S A+I
Sbjct: 4   MDFIHKAGLKKTISNVGPFYPQLIKEFIVNLPDEFNDPSSDDYQSVHIRGFKFVVSSAVI 63

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           NGFLG TVDIDCSPSCPTTEVLA VLSRGT               +KY ILHKIGIANWF
Sbjct: 64  NGFLGNTVDIDCSPSCPTTEVLATVLSRGTLFTWPVNGILAAALNVKYAILHKIGIANWF 123

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PSSHASSISAAL TFLYQICNDDKVD GAFIYNQLLRH+GSFG+KVPIAFSRLFSSLLLH
Sbjct: 124 PSSHASSISAALRTFLYQICNDDKVDMGAFIYNQLLRHVGSFGIKVPIAFSRLFSSLLLH 183

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNG +LTASDA GPEPKTIALSYRLFQGSHVPDIDH V+PT+GPRIFDT DWD+S EGFY
Sbjct: 184 LNGAMLTASDAPGPEPKTIALSYRLFQGSHVPDIDHGVHPTRGPRIFDTTDWDDSIEGFY 243

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSR 277
           VD ELATRIIN LTA+  ALTNSITLLSER+LEVDALIRHLKS TPSTSR
Sbjct: 244 VDCELATRIINFLTAESHALTNSITLLSERQLEVDALIRHLKSLTPSTSR 293

[Close]
BLAST of Pay0001254 vs. NCBI nr
Match: XP_008462856.1 (PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo])

HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-136
Identity = 253/296 (85.47%), Postives = 262/296 (88.51%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           M+L HKAGLEKTISNVGPFYPQLIREFIVNLPD+FNDPSS +YQT+HIRGFKFVISPA+I
Sbjct: 1   MNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVI 60

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           N FLG TVDID S SCPTTEVLA VLS GT               +KY ILHKIGIANWF
Sbjct: 61  NEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSVKYAILHKIGIANWF 120

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PSSHASSISAAL TFLYQICN DKVDTGAFIYNQLL H+GSF VKVPIAF RLFSSLLLH
Sbjct: 121 PSSHASSISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLH 180

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNGVVLTASDA GPEPKTIALSYRLFQGSHVPDIDHDV+PT GPRIFDT DWDESAEGFY
Sbjct: 181 LNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFY 240

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSRQQPPSG 283
           VDRELATRIINSLTA+ RALTNSITLLSERRLEVDALIRHLKSS PSTSRQQPPSG
Sbjct: 241 VDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 296

[Close]
BLAST of Pay0001254 vs. NCBI nr
Match: TYK29236.1 (uncharacterized protein E5676_scaffold1228G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 491.5 bits (1264), Expect = 4.8e-135
Identity = 248/296 (83.78%), Postives = 262/296 (88.51%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           M+LIHKAGL+KTISNVGPFYPQLIREFIVNLPDEFNDPSSADY T+HIRGFKFVISPA+I
Sbjct: 4   MNLIHKAGLKKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYHTVHIRGFKFVISPAVI 63

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           NGFLG TVDIDCSPSCPTT+VLA VL  GT               +KY ILHKIGIANWF
Sbjct: 64  NGFLGNTVDIDCSPSCPTTKVLANVLFGGTLSTWLVNGIPTAALSVKYAILHKIGIANWF 123

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PS HASSIS ALGTFLYQICN DKVDTGAFIYNQLLRH+GSFGVKVPIAFSRLFSSLLL+
Sbjct: 124 PSLHASSISVALGTFLYQICNSDKVDTGAFIYNQLLRHVGSFGVKVPIAFSRLFSSLLLY 183

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNG VLTASDA GPEPKTIALSYRLFQGSH+PDIDHDV+PT+GP IF+T DWD+ AEGFY
Sbjct: 184 LNGAVLTASDAPGPEPKTIALSYRLFQGSHMPDIDHDVHPTRGPCIFETTDWDDFAEGFY 243

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSRQQPPSG 283
           VDRELATRIINSLTA+  ALTNSITLLSERRLEVDALIRHLKSS  STSRQQP SG
Sbjct: 244 VDRELATRIINSLTAESHALTNSITLLSERRLEVDALIRHLKSSALSTSRQQPSSG 299

[Close]
BLAST of Pay0001254 vs. NCBI nr
Match: XP_008466681.1 (PREDICTED: uncharacterized protein LOC103504033 [Cucumis melo])

HSP 1 Score: 489.6 bits (1259), Expect = 1.8e-134
Identity = 248/296 (83.78%), Postives = 257/296 (86.82%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFN+PSSADYQT+HIRGFKFVISP  I
Sbjct: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNNPSSADYQTVHIRGFKFVISPTAI 60

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           NGFLG T+DIDCS SCP TEVLA VLS GT               +KY+ILHKIGIANWF
Sbjct: 61  NGFLGNTIDIDCSRSCPITEVLATVLSGGTLSTWPMNGIPAAALSVKYVILHKIGIANWF 120

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PSSHASSIS ALG FLYQICNDDKVDTGAFIYNQLLRH+GSFGVKVPIA  RLF SLLLH
Sbjct: 121 PSSHASSISVALGAFLYQICNDDKVDTGAFIYNQLLRHVGSFGVKVPIALLRLFFSLLLH 180

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNG VLTASD   PEPKTIALSYRLFQG H+PDID DV+PT GPRIFDTIDWDESAEGFY
Sbjct: 181 LNGAVLTASDTPRPEPKTIALSYRLFQGIHMPDIDPDVHPTWGPRIFDTIDWDESAEGFY 240

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSRQQPPSG 283
           VDRELAT IINSLTA+  ALTNSITLLSERRLEVDALIRHLKSS PSTSRQ PPSG
Sbjct: 241 VDRELATCIINSLTAESCALTNSITLLSERRLEVDALIRHLKSSAPSTSRQHPPSG 296

[Close]
BLAST of Pay0001254 vs. NCBI nr
Match: KAA0041594.1 (uncharacterized protein E6C27_scaffold93G00610 [Cucumis melo var. makuwa] >TYK19661.1 uncharacterized protein E5676_scaffold242G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 489.6 bits (1259), Expect = 1.8e-134
Identity = 248/296 (83.78%), Postives = 257/296 (86.82%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFN+PSSADYQT+HIRGFKFVISP  I
Sbjct: 4   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNNPSSADYQTVHIRGFKFVISPTAI 63

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           NGFLG T+DIDCS SCP TEVLA VLS GT               +KY+ILHKIGIANWF
Sbjct: 64  NGFLGNTIDIDCSRSCPITEVLATVLSGGTLSTWPMNGIPAAALSVKYVILHKIGIANWF 123

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PSSHASSIS ALG FLYQICNDDKVDTGAFIYNQLLRH+GSFGVKVPIA  RLF SLLLH
Sbjct: 124 PSSHASSISVALGAFLYQICNDDKVDTGAFIYNQLLRHVGSFGVKVPIALLRLFFSLLLH 183

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNG VLTASD   PEPKTIALSYRLFQG H+PDID DV+PT GPRIFDTIDWDESAEGFY
Sbjct: 184 LNGAVLTASDTPRPEPKTIALSYRLFQGIHMPDIDPDVHPTWGPRIFDTIDWDESAEGFY 243

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSRQQPPSG 283
           VDRELAT IINSLTA+  ALTNSITLLSERRLEVDALIRHLKSS PSTSRQ PPSG
Sbjct: 244 VDRELATCIINSLTAESCALTNSITLLSERRLEVDALIRHLKSSAPSTSRQHPPSG 299

[Close]
BLAST of Pay0001254 vs. NCBI nr
Match: TYK25712.1 (uncharacterized protein E5676_scaffold2736G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 485.0 bits (1247), Expect = 4.5e-133
Identity = 242/290 (83.45%), Postives = 257/290 (88.62%), Query Frame = 0 

Query: 1   MDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYQTMHIRGFKFVISPAMI 60
           MD IHKAGL+KTISNVGPFYPQLI+EFIVNLPDEFNDPSS DYQ++HIRGFKFV+S A+I
Sbjct: 4   MDFIHKAGLKKTISNVGPFYPQLIKEFIVNLPDEFNDPSSDDYQSVHIRGFKFVVSSAVI 63

Query: 61  NGFLGTTVDIDCSPSCPTTEVLAIVLSRGTF--------------IKYIILHKIGIANWF 120
           NGFLG TVDIDCSPSCPTTEVLA VLSRGT               +KY ILHKIGIANWF
Sbjct: 64  NGFLGNTVDIDCSPSCPTTEVLATVLSRGTLFTWPVNGILAAALNVKYAILHKIGIANWF 123

Query: 121 PSSHASSISAALGTFLYQICNDDKVDTGAFIYNQLLRHIGSFGVKVPIAFSRLFSSLLLH 180
           PSSHASSISAAL TFLYQICNDDKVD GAFIYNQLLRH+GSFG+KVPIAFSRLFSSLLLH
Sbjct: 124 PSSHASSISAALRTFLYQICNDDKVDMGAFIYNQLLRHVGSFGIKVPIAFSRLFSSLLLH 183

Query: 181 LNGVVLTASDASGPEPKTIALSYRLFQGSHVPDIDHDVYPTQGPRIFDTIDWDESAEGFY 240
           LNG +LTASDA GPEPKTIALSYRLFQGSHVPDIDH V+PT+GPRIFDT DWD+S EGFY
Sbjct: 184 LNGAMLTASDAPGPEPKTIALSYRLFQGSHVPDIDHGVHPTRGPRIFDTTDWDDSIEGFY 243

Query: 241 VDRELATRIINSLTAKYRALTNSITLLSERRLEVDALIRHLKSSTPSTSR 277
           VD ELATRIIN LTA+  ALTNSITLLSER+LEVDALIRHLKS TPSTSR
Sbjct: 244 VDCELATRIINFLTAESHALTNSITLLSERQLEVDALIRHLKSLTPSTSR 293

The following BLAST results are available for this feature:
BLAST of Pay0001254 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0001254 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CHW37.3e-13785.47uncharacterized protein LOC103501137 OS=Cucumis melo OX=3656 GN=LOC103501137 PE=... [more]
A0A5D3E0012.3e-13583.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TDT98.9e-13583.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CRT18.9e-13583.78uncharacterized protein LOC103504033 OS=Cucumis melo OX=3656 GN=LOC103504033 PE=... [more]
A0A5D3DQA52.2e-13383.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Pay0001254 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462856.11.5e-13685.47PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo][more]
TYK29236.14.8e-13583.78uncharacterized protein E5676_scaffold1228G00270 [Cucumis melo var. makuwa][more]
XP_008466681.11.8e-13483.78PREDICTED: uncharacterized protein LOC103504033 [Cucumis melo][more]
KAA0041594.11.8e-13483.78uncharacterized protein E6C27_scaffold93G00610 [Cucumis melo var. makuwa] >TYK19... [more]
TYK25712.14.5e-13383.45uncharacterized protein E5676_scaffold2736G00070 [Cucumis melo var. makuwa][more]
BLAST of Pay0001254 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0001254.1Pay0001254.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding