PI0029028 (gene) Melon (PI 482460) v1

Overview


Name	PI0029028
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein TonB like
Location	chr11: 3191473 .. 3193936 (-)
RNA-Seq Expression	PI0029028
Synteny	PI0029028

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTAGTTGCCTTGGACGCTTGTCTTCCACCGCTCTCGTCGGCGCCAACGATATCGCTACTCTCAAACTGCACGACCCCTTTCTACGATGATCAACGACCACGCACTTCCGTCAGGTCTTGTTCTGTCTCACACCGAAACAATTCGCTCCTTTCTCAGCTCGGCGTCCATAGATTCACAACTTTCTGACGAACTCCGGCAGATTGCTTCAGATCTCGCTTCACAAAACAACATTCCGTATAAGCTGCTGAGAGCTATCTGGTTTGCTACGGAATCGTCCACAAGGCCGGACTTGCTCCGTCTTTTGGCTGGATCAGAGTTCGTCTTTACAAGCCCTAAACCCAGGGAGAAGGTATGTATAGTAATTTAGATTTGGGTCCTGTTCATTTAGTTCTATTTGAAGTTTTATGTACTAGCAAGTTCTGGGTTGATGGTTTTATTAGTCGGAGTGATGATTTGATTACAAAACTGGAGAAAGGAAATCCAAATCCAAATGAATGGTGAGGTTCTTTGAAATTTCTGAAATTGGGGTATAATCAACGCAAAAGAGGTTACCTTGCTTGAAGCGGGGGGGGGGGGGGAAGGGTGGGGATGTGTGCAATATTGGATTTTATGCTGATGTGTTCTTGAACAATGCTCAAACTAGTGGTCTATTAAAAACTCAGAGCACACAAATTGTATACGTTCTTTAAGAAACAGCATATTCAGTACTTCTACGACCATGCTAATGATGTCATTCAGTTATTGGATCCCTTCAATCTGGATATGCTTGGCCCTTGCTGTATTCAGTAGTTTGAGTCTTTGAACCACGTTTCTAGGAAGCCACATTGAACTTTATAAATATGAAAACTTCTAGATTTCAGAACTTTGGGTTTTAAATATATATATAGATTTTCTTGTGGGGTTGTTAACTTATTGATATGTGTATACAGAGTGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGCAGATGTAGCAGAGAGGAAGGCCTATCAGGAACTGGTGAAGGATATTGCACCTAAGAAACCAACTAATGAGCCTTTCTCTTCCTACAAGGATCAGCTCGGATTCGGTATGTATGCAATCTGTCGTTTTACATTACCAACATATATTGATATATTCCTTTTTATGATATATTTAAATATGGGTGCATTTTATGTATAAGATAAAATTTTATGCAGTTCTATGAAATAATATGGCCTTGTCATATTTACAAAAGAGAAATTTATCATCTATAAAATCTTCATTAGGTGATATTTTTTTATAGTTTTCTATATGGGTATTACAAGACTGCTTGAATCGATACCTCCCATGAACGTTTTACATGAACTCTTGCAATTTTTGACTTCTTTTCGAACCTTTGAAATCTCCCATGTCATATTGTTATTTCTTGTTTGCTGTTGCCTTCAGAACATAAAGAATTAACACCCTCATGATTTTGTTGCAGGTTTACATGTTGTGTTGATAATGTTTACTGGCTATCTTGTTGGGTATGCTTTATTCCGAGCATTGTTTAGGCATGATCCAATCATGGTATCTACTCGATATTTGTTTAACTTTTGAGCAATCTCATTAATTTCTGATTCTCTTAGTACTGTCATTTATTGGGCAATCAATTTTGTTTCTCAGAGTGCTGCTGGAGGTATCCTTGGATTAGTTTTTGGCATGCTCGTGGAAACACTTCTTTTCATCATTCGATCATCCAATTATGATAATCGGTCTTCATCATCTTCCCGTTCTAAGCTGAAGAAGAGTCAGTAGAGTTACTTCTCGAGGTTTGCCTTTCTTTATACTTAAACCATGGCATCCGTGCTTACAGTTTCTAATATAACCCATTAAGTTAACTTTGTCCCTGTGCTGTAGATCCAGGCATAAACAAGTAATAACAAGGCCTTATTAATGTGCTTGCTTCAATTTATTTGTATAAAGACACGTTCTTCACATCAAGAAAATTGAGAAGCAATATCTAATGCTTCAGCCTATGACCACAGAAAATGTTCTTCACATCAAGAGAATTGAGAAGCAATTTGTAATGATTGTCTTGTACTCTCTTCAGCCTATGACCACAGAAAAAGGAAAGCACGATTATGCCCTTCAAATAATTGTCTTTTGGAAGAGAAACCTTGATGTAAAATTTTTTATTTCAAATAACAATCCGTTTGAAATTTGAAGGTAGCCTTTTGGTGTCCATCTGATCTGATGTTACATGATGGACAGCTCCCGATGTTCTCCCTTGTTTGAAGAGTGTCTAACTATACCGATACATGTTTTTCGGTTTGGTTTGGTTTGGTTTGGTTGCTCTCATCTGAAAATTCGACCCAAGATTTTGATGCCTTCCTTCCTTCCAGATACGCACAAATCATGTGGAGAAGTTATGTTGAGGTTGAATTGAGTTCCAACTTGGAAATTTGATGTATAATGTTTTAACAAGTTAGCGATTGTTAAATCAAATAAAATTTCAATGA

mRNA sequence

TTTTTAGTTGCCTTGGACGCTTGTCTTCCACCGCTCTCGTCGGCGCCAACGATATCGCTACTCTCAAACTGCACGACCCCTTTCTACGATGATCAACGACCACGCACTTCCGTCAGGTCTTGTTCTGTCTCACACCGAAACAATTCGCTCCTTTCTCAGCTCGGCGTCCATAGATTCACAACTTTCTGACGAACTCCGGCAGATTGCTTCAGATCTCGCTTCACAAAACAACATTCCGTATAAGCTGCTGAGAGCTATCTGGTTTGCTACGGAATCGTCCACAAGGCCGGACTTGCTCCGTCTTTTGGCTGGATCAGAGTTCGTCTTTACAAGCCCTAAACCCAGGGAGAAGAGTGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGCAGATGTAGCAGAGAGGAAGGCCTATCAGGAACTGGTGAAGGATATTGCACCTAAGAAACCAACTAATGAGCCTTTCTCTTCCTACAAGGATCAGCTCGGATTCGGTTTACATGTTGTGTTGATAATGTTTACTGGCTATCTTGTTGGGTATGCTTTATTCCGAGCATTGTTTAGGCATGATCCAATCATGAGTGCTGCTGGAGGTATCCTTGGATTAGTTTTTGGCATGCTCGTGGAAACACTTCTTTTCATCATTCGATCATCCAATTATGATAATCGGTCTTCATCATCTTCCCGTTCTAAGCTGAAGAAGAGTCAGTAGAGTTACTTCTCGAGATCCAGGCATAAACAAGTAATAACAAGGCCTTATTAATGTGCTTGCTTCAATTTATTTGTATAAAGACACGTTCTTCACATCAAGAAAATTGAGAAGCAATATCTAATGCTTCAGCCTATGACCACAGAAAATGTTCTTCACATCAAGAGAATTGAGAAGCAATTTGTAATGATTGTCTTGTACTCTCTTCAGCCTATGACCACAGAAAAAGGAAAGCACGATTATGCCCTTCAAATAATTGTCTTTTGGAAGAGAAACCTTGATGTAAAATTTTTTATTTCAAATAACAATCCGTTTGAAATTTGAAGGTAGCCTTTTGGTGTCCATCTGATCTGATGTTACATGATGGACAGCTCCCGATGTTCTCCCTTGTTTGAAGAGTGTCTAACTATACCGATACATGTTTTTCGGTTTGGTTTGGTTTGGTTTGGTTGCTCTCATCTGAAAATTCGACCCAAGATTTTGATGCCTTCCTTCCTTCCAGATACGCACAAATCATGTGGAGAAGTTATGTTGAGGTTGAATTGAGTTCCAACTTGGAAATTTGATGTATAATGTTTTAACAAGTTAGCGATTGTTAAATCAAATAAAATTTCAATGA

Coding sequence (CDS)

ATGATCAACGACCACGCACTTCCGTCAGGTCTTGTTCTGTCTCACACCGAAACAATTCGCTCCTTTCTCAGCTCGGCGTCCATAGATTCACAACTTTCTGACGAACTCCGGCAGATTGCTTCAGATCTCGCTTCACAAAACAACATTCCGTATAAGCTGCTGAGAGCTATCTGGTTTGCTACGGAATCGTCCACAAGGCCGGACTTGCTCCGTCTTTTGGCTGGATCAGAGTTCGTCTTTACAAGCCCTAAACCCAGGGAGAAGAGTGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGCAGATGTAGCAGAGAGGAAGGCCTATCAGGAACTGGTGAAGGATATTGCACCTAAGAAACCAACTAATGAGCCTTTCTCTTCCTACAAGGATCAGCTCGGATTCGGTTTACATGTTGTGTTGATAATGTTTACTGGCTATCTTGTTGGGTATGCTTTATTCCGAGCATTGTTTAGGCATGATCCAATCATGAGTGCTGCTGGAGGTATCCTTGGATTAGTTTTTGGCATGCTCGTGGAAACACTTCTTTTCATCATTCGATCATCCAATTATGATAATCGGTCTTCATCATCTTCCCGTTCTAAGCTGAAGAAGAGTCAGTAG

Protein sequence

MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKPTNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRSKLKKSQ

Homology

[Close]

BLAST of PI0029028 vs. ExPASy TrEMBL
Match: A0A0A0K7F5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003470 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.7e-101
Identity = 200/206 (97.09%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MINDHALPSGLVLSHTE IRSFL+SASIDSQLSDELRQIASDL SQ NIPYKLLRAIWFA
Sbjct: 1   MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
            +EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIRSSNYDNRSSSSSRSKLKKSQ
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

[Close]

BLAST of PI0029028 vs. ExPASy TrEMBL
Match: A0A1S3C6X8 (uncharacterized protein LOC103497719 OS=Cucumis melo OX=3656 GN=LOC103497719 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100
Identity = 199/206 (96.60%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MINDH LPSGLVLSHTE IRSFL+SASIDSQLSDELRQIASDLASQ NIPYKLLRAIWFA
Sbjct: 1   MINDHGLPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLASQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
            +EPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLLGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIRSSNYDNRSSSSSRSKLKKSQ
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

[Close]

BLAST of PI0029028 vs. ExPASy TrEMBL
Match: A0A5D3BV73 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001050 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100
Identity = 199/206 (96.60%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MINDH LPSGLVLSHTE IRSFL+SASIDSQLSDELRQIASDLASQ NIPYKLLRAIWFA
Sbjct: 1   MINDHGLPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLASQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
            +EPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLLGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIRSSNYDNRSSSSSRSKLKKSQ
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

[Close]

BLAST of PI0029028 vs. ExPASy TrEMBL
Match: A0A6J1H4N6 (uncharacterized protein LOC111460360 OS=Cucurbita moschata OX=3662 GN=LOC111460360 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.9e-94
Identity = 186/206 (90.29%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MIND A PSGLV++HTE IRSFL+SASIDS++S+ELRQ+AS+LASQ+N+PYK LRAIWFA
Sbjct: 1   MINDQAHPSGLVIAHTEAIRSFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLNGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
            +EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIR+S+YDNRSSSSSRSKLKK+Q
Sbjct: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 206

[Close]

BLAST of PI0029028 vs. ExPASy TrEMBL
Match: A0A6J1L0S3 (uncharacterized protein LOC111499322 OS=Cucurbita maxima OX=3661 GN=LOC111499322 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.7e-93
Identity = 183/206 (88.83%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MIND A PSGLV++HTE IR+FL+SASIDS++S+ELRQ+AS+LASQ+N+PYK LRAIWFA
Sbjct: 1   MINDQAHPSGLVIAHTEAIRTFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLYGSEFVFTSPKPREKSEELKARLKNLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
            +EPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIR+S+YDNRSSSSSRSKLKK+Q
Sbjct: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 206

[Close]

BLAST of PI0029028 vs. NCBI nr
Match: XP_004138504.1 (uncharacterized protein LOC101222938 [Cucumis sativus] >XP_031743185.1 uncharacterized protein LOC101222938 [Cucumis sativus] >KGN45655.1 hypothetical protein Csa_005323 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 9.7e-101
Identity = 200/206 (97.09%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MINDHALPSGLVLSHTE IRSFL+SASIDSQLSDELRQIASDL SQ NIPYKLLRAIWFA
Sbjct: 1   MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
            +EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIRSSNYDNRSSSSSRSKLKKSQ
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

[Close]

BLAST of PI0029028 vs. NCBI nr
Match: XP_008458236.1 (PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458237.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458238.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458239.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >TYK03010.1 uncharacterized protein E5676_scaffold46G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 375.9 bits (964), Expect = 2.2e-100
Identity = 199/206 (96.60%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MINDH LPSGLVLSHTE IRSFL+SASIDSQLSDELRQIASDLASQ NIPYKLLRAIWFA
Sbjct: 1   MINDHGLPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLASQRNIPYKLLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
            +EPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLLGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIRSSNYDNRSSSSSRSKLKKSQ
Sbjct: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 206

[Close]

BLAST of PI0029028 vs. NCBI nr
Match: XP_038876067.1 (uncharacterized protein LOC120068388 [Benincasa hispida])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 193/206 (93.69%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MINDH  PSGLVLS+TE IRSFL+SASIDSQLSDELRQIASDLASQ NIPYK LRAIWFA
Sbjct: 1   MINDHTHPSGLVLSNTEAIRSFLTSASIDSQLSDELRQIASDLASQQNIPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
            ESS RPDLLRLLAGSEFV TSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP
Sbjct: 61  KESSARPDLLRLLAGSEFVLTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
             EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IEEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIRSSNYDNRSSSSS SKLKKSQ
Sbjct: 181 LLFIIRSSNYDNRSSSSSHSKLKKSQ 206

[Close]

BLAST of PI0029028 vs. NCBI nr
Match: XP_023548168.1 (uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-94
Identity = 186/206 (90.29%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MIND A PSGLV++HTE IRSFL+SASIDS++S+ELRQ+AS+LASQ+N+PYK LRAIWFA
Sbjct: 1   MINDQAHPSGLVIAHTEAIRSFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLNGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
            +EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 VDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIR+S+YDNRSSSSSRSKLKK+Q
Sbjct: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 206

[Close]

BLAST of PI0029028 vs. NCBI nr
Match: XP_022959366.1 (uncharacterized protein LOC111460360 [Cucurbita moschata])

HSP 1 Score: 355.1 bits (910), Expect = 4.0e-94
Identity = 186/206 (90.29%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MINDHALPSGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFA 60
           MIND A PSGLV++HTE IRSFL+SASIDS++S+ELRQ+AS+LASQ+N+PYK LRAIWFA
Sbjct: 1   MINDQAHPSGLVIAHTEAIRSFLTSASIDSRISEELRQLASNLASQDNVPYKPLRAIWFA 60

Query: 61  TESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120
           TESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP
Sbjct: 61  TESSTRPDLLRLLNGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKP 120

Query: 121 TNEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180
            +EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET
Sbjct: 121 IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVET 180

Query: 181 LLFIIRSSNYDNRSSSSSRSKLKKSQ 207
           LLFIIR+S+YDNRSSSSSRSKLKK+Q
Sbjct: 181 LLFIIRASSYDNRSSSSSRSKLKKNQ 206

[Close]

BLAST of PI0029028 vs. TAIR 10
Match: AT5G52980.1 (CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 256.5 bits (654), Expect = 1.8e-68
Identity = 139/190 (73.16%), Postives = 153/190 (80.53%), Query Frame = 0


Query: 9   SGLVLSHTETIRSFLSSASIDSQLSDELRQIASDLASQNNIPYKLLRAIWFATESSTRPD 68
           SGL+LS TE +RSFL+ AS D +LSDELR IASDL S+N IPYKLLRAIW  ++ STRPD
Sbjct: 10  SGLILSATEPLRSFLALASGDRRLSDELRGIASDLRSKNTIPYKLLRAIWTGSDPSTRPD 69

Query: 69  LLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKPTNEPFSSY 128
           LL L +GS FVFTSPKPREKSEELK RL KL ++AERK Y ELVKDI PKK   EPFSSY
Sbjct: 70  LLGLFSGSNFVFTSPKPREKSEELKLRLVKLREIAERKEYAELVKDITPKKQVEEPFSSY 129

Query: 129 KDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSS 188
           KDQLGFGLHV L MFTGYLVGYA FRALF  +P +SAAGGILGLV  MLVETLLFII++S
Sbjct: 130 KDQLGFGLHVGLTMFTGYLVGYASFRALFNRNPALSAAGGILGLVLAMLVETLLFIIKTS 189

Query: 189 NYDNRSSSSS 199
             D   SS S
Sbjct: 190 KDDQIQSSKS 199

The following BLAST results are available for this feature:

BLAST of PI0029028 vs.


Match Name	E-value	Identity	Description

BLAST of PI0029028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7F5	4.7e-101	97.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003470 PE=4 SV=1	[more]
A0A1S3C6X8	1.0e-100	96.60	uncharacterized protein LOC103497719 OS=Cucumis melo OX=3656 GN=LOC103497719 PE=...	[more]
A0A5D3BV73	1.0e-100	96.60	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1H4N6	1.9e-94	90.29	uncharacterized protein LOC111460360 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1L0S3	4.7e-93	88.83	uncharacterized protein LOC111499322 OS=Cucurbita maxima OX=3661 GN=LOC111499322...	[more]

BLAST of PI0029028 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138504.1	9.7e-101	97.09	uncharacterized protein LOC101222938 [Cucumis sativus] >XP_031743185.1 uncharact...	[more]
XP_008458236.1	2.2e-100	96.60	PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458237.1 P...	[more]
XP_038876067.1	1.2e-95	93.69	uncharacterized protein LOC120068388 [Benincasa hispida]	[more]
XP_023548168.1	3.0e-94	90.29	uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo]	[more]
XP_022959366.1	4.0e-94	90.29	uncharacterized protein LOC111460360 [Cucurbita moschata]	[more]

BLAST of PI0029028 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52980.1	1.8e-68	73.16	CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..106
None	No IPR available	PANTHER	PTHR31394:SF2	BNAA02G10570D PROTEIN	coord: 8..201
IPR021013	ATPase, vacuolar ER assembly factor, Vma12	PFAM	PF11712	Vma12	coord: 72..178 e-value: 4.9E-6 score: 26.7
IPR021013	ATPase, vacuolar ER assembly factor, Vma12	PANTHER	PTHR31394	TRANSMEMBRANE PROTEIN 199	coord: 8..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0029028.1	PI0029028.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane