PI0028801 (gene) Melon (PI 482460) v1

Overview


Name	PI0028801
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon protein
Location	chr05: 12640667 .. 12641660 (+)
RNA-Seq Expression	PI0028801
Synteny	PI0028801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGACAAATTCAAAGGTCACTAAGCATCGGTGGACAACCATTGAGGATGACGCATTAGTTGAGTGCTTACGACAACTAGTGGAGGAAGGTGGCTTGAGGGCTGATAATGGGACATTCAAACCTGGATATTTGGTACAAGTACAAAAACTAATGACAGATAAAATTCCTGGAAGCAACATACAAGTAACTCCAAATCTAGAGCCGATAGTGAAAATTTTGAAGAAGAAGTACACTGCCATAGCAGAGATGATGGGACCGTGGGTTTGGTTGGAATGCGGAACGAAAGTGCATTGAGGCAGAGAAATCTGCGTTCGATGACTGGGTTAAGGTAAGACGATGAATATAATTCATACTTTCTATAAAAGTAAAATATAATATACTTAAATTTATTAACTCTATGTAGGGACACCCCAATGCTCGAGGTCTATTGAACAAACCATTTCCTTACTTCTATGACTTGGAAATTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACATGCGTTGAAATGGGCTCACAAACTGAAAAAGATATTGAGGAAGATGACATGGACATTAATCTCGAAGATTTTGATATTCCAAATCCATATGGGCTCGAGCCACCATCGGGGGAGGACATGTCATCTATTCCAACAAATATGGCACATGATGCAGGATCATCTAGGCCAAGTAAGAAAAAGCGATCATATTCAAGGGATCTCATGGACACATTTCATGTAGATATGCAAGAAGTTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAACAAGAAAAAATGGAAATCGAATCATCCCTACGCAAACTATTATATGTTGAATTACAGACTATTCATGGAATGGATGTAGACGATTGTTTGATTGTAGTCGAGTCTCTATTACCTAATCCACGATGTTGCACACATTCCTTGACTGTCACACACCGCCCCAAATGTCACTTCATGCGACTAGATGGAAGCGTGCCGCCTAGACACTCAATGTAA

mRNA sequence

ATGGCGTCGACAAATTCAAAGGTCACTAAGCATCGGTGGACAACCATTGAGGATGACGCATTAGTTGAGTGCTTACGACAACTAGTGGAGGAAGGTGGCTTGAGGGCTGATAATGGGACATTCAAACCTGGATATTTGGTACAAGTACAAAAACTAATGACAGATAAAATTCCTGGAAGCAACATACAAGGACACCCCAATGCTCGAGGTCTATTGAACAAACCATTTCCTTACTTCTATGACTTGGAAATTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACATGCGTTGAAATGGGCTCACAAACTGAAAAAGATATTGAGGAAGATGACATGGACATTAATCTCGAAGATTTTGATATTCCAAATCCATATGGGCTCGAGCCACCATCGGGGGAGGACATGTCATCTATTCCAACAAATATGGCACATGATGCAGGATCATCTAGGCCAAGTAAGAAAAAGCGATCATATTCAAGGGATCTCATGGACACATTTCATGTAGATATGCAAGAAGTTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAACAAGAAAAAATGGAAATCGAATCATCCCTACGCAAACTATTATATGTTGAATTACAGACTATTCATGGAATGGATGTAGACGATTGTTTGATTGTAGTCGAGTCTCTATTACCTAATCCACGATGTTGCACACATTCCTTGACTGTCACACACCGCCCCAAATGTCACTTCATGCGACTAGATGGAAGCGTGCCGCCTAGACACTCAATGTAA

Coding sequence (CDS)

ATGGCGTCGACAAATTCAAAGGTCACTAAGCATCGGTGGACAACCATTGAGGATGACGCATTAGTTGAGTGCTTACGACAACTAGTGGAGGAAGGTGGCTTGAGGGCTGATAATGGGACATTCAAACCTGGATATTTGGTACAAGTACAAAAACTAATGACAGATAAAATTCCTGGAAGCAACATACAAGGACACCCCAATGCTCGAGGTCTATTGAACAAACCATTTCCTTACTTCTATGACTTGGAAATTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACATGCGTTGAAATGGGCTCACAAACTGAAAAAGATATTGAGGAAGATGACATGGACATTAATCTCGAAGATTTTGATATTCCAAATCCATATGGGCTCGAGCCACCATCGGGGGAGGACATGTCATCTATTCCAACAAATATGGCACATGATGCAGGATCATCTAGGCCAAGTAAGAAAAAGCGATCATATTCAAGGGATCTCATGGACACATTTCATGTAGATATGCAAGAAGTTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAACAAGAAAAAATGGAAATCGAATCATCCCTACGCAAACTATTATATGTTGAATTACAGACTATTCATGGAATGGATGTAGACGATTGTTTGATTGTAGTCGAGTCTCTATTACCTAATCCACGATGTTGCACACATTCCTTGACTGTCACACACCGCCCCAAATGTCACTTCATGCGACTAGATGGAAGCGTGCCGCCTAGACACTCAATGTAA

Protein sequence

MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQVQKLMTDKIPGSNIQGHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTCVEMGSQTEKDIEEDDMDINLEDFDIPNPYGLEPPSGEDMSSIPTNMAHDAGSSRPSKKKRSYSRDLMDTFHVDMQEVSKEIGKIAAWQQEKMEIESSLRKLLYVELQTIHGMDVDDCLIVVESLLPNPRCCTHSLTVTHRPKCHFMRLDGSVPPRHSM

Homology

[Close]

BLAST of PI0028801 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.1e-94
Identity = 180/248 (72.58%), Postives = 195/248 (78.63%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQ---VQKLMTDKI 60
           MASTNSK TKHRWTTIED+ LVECL QLVEEGG RADNGTFK GYL Q   + ++M    
Sbjct: 138 MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGPAC 197

Query: 61  PGSN------------------IQGHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTC 120
            G                    ++GHPNA+GLLNKPFPYFYDLE+VFGRDRATGGRCKT 
Sbjct: 198 SGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTP 257

Query: 121 VEMGSQTEKDIEEDDMDINLEDFDIPNPYGLEPPSGEDMSSIPTNMAHDAGSSRPSKKKR 180
           VEM SQT +D EEDDMDINLEDFDIPNP+GLEPPSGEDM S PT+M HDAGSSRPSKK+R
Sbjct: 258 VEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKRR 317

Query: 181 SYSRDLMDTFHVDMQEVSKEIGKIAAWQQEKMEIESSLRKLLYVELQTIHGMDVDDCLIV 228
           SYS DLMDTF   M+E SKEIGKIA WQ+EKMEIESSL K LY ELQTI GMDVDDCLIV
Sbjct: 318 SYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIV 377

[Close]

BLAST of PI0028801 vs. ExPASy TrEMBL
Match: A0A5A7U3R2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001010 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 9.4e-83
Identity = 160/221 (72.40%), Postives = 173/221 (78.28%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQVQKLMTDKIPGS 60
           M STN K T+HRWTTIED+ALVECL QL+EEGG R DNGTFK  YLVQ+QKLM +KI GS
Sbjct: 328 MTSTNLKATQHRWTTIEDEALVECLLQLMEEGGWRVDNGTFKLRYLVQIQKLMKEKIHGS 387

Query: 61  NIQ-----------------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTCVEMG 120
           NIQ                 GHPN R LLNKPFPYFYDLE+VFGRDRATGGRCKT VEMG
Sbjct: 388 NIQVTPNLELRIKILKKQYTGHPNVRSLLNKPFPYFYDLEVVFGRDRATGGRCKTSVEMG 447

Query: 121 SQTEKDIEEDDMDINLEDFDIPNPYGLEPPSGEDMSSIPTNMAHDAGSSRPSKKKRSYSR 180
           SQT +D EEDDMDINLE FDI NP+GLE PSGEDM S PT+M HD  SSRPSKK+RSYS 
Sbjct: 448 SQTVRDTEEDDMDINLEHFDILNPHGLELPSGEDMPSTPTSMVHDVKSSRPSKKRRSYSG 507

Query: 181 DLMDTFHVDMQEVSKEIGKIAAWQQEKMEIESSLRKLLYVE 205
           DLMDTFH  M+E SKEIGKIAAWQ+E +EIESSL K LY E
Sbjct: 508 DLMDTFHASMRETSKEIGKIAAWQRETIEIESSLHKRLYAE 548

[Close]

BLAST of PI0028801 vs. ExPASy TrEMBL
Match: A0A5A7U7F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001200 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 2.0e-77
Identity = 161/236 (68.22%), Postives = 181/236 (76.69%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQVQKLMTDKIPGS 60
           MASTNSK TKHRWTTI D+ LVECL QLVEEGG RADNGTFK GYLVQVQKLM +KI GS
Sbjct: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKILGS 60

Query: 61  NIQGHPNARG---LLNKPFPYFYDL------EIVFGRDRATGGRCKTCVEMGSQTEKDIE 120
           NIQ  PN +    +L K +    ++         +  +R      K+  +   +T +DIE
Sbjct: 61  NIQVTPNLKSRVKILKKQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVKTARDIE 120

Query: 121 EDDMDINLEDFDIPNPYGLEPPSGEDMSSIPTNMAHDAGSSRPSKKKRSYSRDLMDTFHV 180
           EDDMDINLEDFDIPNP+GLEPPSGEDM S PT+MAHDAGSSRPSKK+RSYS DLMDTF  
Sbjct: 121 EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRA 180

Query: 181 DMQEVSKEIGKIAAWQQEKMEIESSLRKLLYVELQTIHGMDVDDCLIVVESLLPNP 228
            M+E SKEIGKIAAWQ+EKMEIESSL K LYV+LQTI GMDVDDCLIV ESLLP+P
Sbjct: 181 SMRETSKEIGKIAAWQREKMEIESSLHKRLYVDLQTIPGMDVDDCLIVAESLLPDP 235

[Close]

BLAST of PI0028801 vs. ExPASy TrEMBL
Match: A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 3.2e-75
Identity = 154/237 (64.98%), Postives = 162/237 (68.35%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQVQKLMTDKIPGS 60
           MASTNSK TKHRWTTI+DDALVECL QLVEEGG RA+N TFKP YLVQVQKLM +KIP S
Sbjct: 1   MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 60

Query: 61  NIQ---------------------------------------------------GHPNAR 120
           NIQ                                                   GHPNAR
Sbjct: 61  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 120

Query: 121 GLLNKPFPYFYDLEIVFGRDRATGGRCKTCVEMGSQTEKDIEEDDMDINLEDFDIPNPYG 180
           GLLNKPF YFYDLEIVFGRD+ATGGRCK  VEM SQT +D EEDDMDINLEDFDIPNP+G
Sbjct: 121 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 180

Query: 181 LEPPSGEDMSSIPTNMAHDAGSSRPSKKKRSYSRDLMDTFHVDMQEVSKEIGKIAAW 187
           LEPPSGEDM S   +M HDAGSSRPSKK+RSY  DLMDTF   MQE SKEIGKIAAW
Sbjct: 181 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 237

[Close]

BLAST of PI0028801 vs. ExPASy TrEMBL
Match: A0A1S3C252 (uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 3.2e-75
Identity = 154/237 (64.98%), Postives = 162/237 (68.35%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQVQKLMTDKIPGS 60
           MASTNSK TKHRWTTI+DDALVECL QLVEEGG RA+N TFKP YLVQVQKLM +KIP S
Sbjct: 33  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 92

Query: 61  NIQ---------------------------------------------------GHPNAR 120
           NIQ                                                   GHPNAR
Sbjct: 93  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 152

Query: 121 GLLNKPFPYFYDLEIVFGRDRATGGRCKTCVEMGSQTEKDIEEDDMDINLEDFDIPNPYG 180
           GLLNKPF YFYDLEIVFGRD+ATGGRCK  VEM SQT +D EEDDMDINLEDFDIPNP+G
Sbjct: 153 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 212

Query: 181 LEPPSGEDMSSIPTNMAHDAGSSRPSKKKRSYSRDLMDTFHVDMQEVSKEIGKIAAW 187
           LEPPSGEDM S   +M HDAGSSRPSKK+RSY  DLMDTF   MQE SKEIGKIAAW
Sbjct: 213 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 269

[Close]

BLAST of PI0028801 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 354.8 bits (909), Expect = 6.5e-94
Identity = 180/248 (72.58%), Postives = 195/248 (78.63%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQ---VQKLMTDKI 60
           MASTNSK TKHRWTTIED+ LVECL QLVEEGG RADNGTFK GYL Q   + ++M    
Sbjct: 138 MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGPAC 197

Query: 61  PGSN------------------IQGHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTC 120
            G                    ++GHPNA+GLLNKPFPYFYDLE+VFGRDRATGGRCKT 
Sbjct: 198 SGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTP 257

Query: 121 VEMGSQTEKDIEEDDMDINLEDFDIPNPYGLEPPSGEDMSSIPTNMAHDAGSSRPSKKKR 180
           VEM SQT +D EEDDMDINLEDFDIPNP+GLEPPSGEDM S PT+M HDAGSSRPSKK+R
Sbjct: 258 VEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKRR 317

Query: 181 SYSRDLMDTFHVDMQEVSKEIGKIAAWQQEKMEIESSLRKLLYVELQTIHGMDVDDCLIV 228
           SYS DLMDTF   M+E SKEIGKIA WQ+EKMEIESSL K LY ELQTI GMDVDDCLIV
Sbjct: 318 SYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIV 377

[Close]

BLAST of PI0028801 vs. NCBI nr
Match: KAA0048191.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 316.6 bits (810), Expect = 1.9e-82
Identity = 160/221 (72.40%), Postives = 173/221 (78.28%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQVQKLMTDKIPGS 60
           M STN K T+HRWTTIED+ALVECL QL+EEGG R DNGTFK  YLVQ+QKLM +KI GS
Sbjct: 328 MTSTNLKATQHRWTTIEDEALVECLLQLMEEGGWRVDNGTFKLRYLVQIQKLMKEKIHGS 387

Query: 61  NIQ-----------------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTCVEMG 120
           NIQ                 GHPN R LLNKPFPYFYDLE+VFGRDRATGGRCKT VEMG
Sbjct: 388 NIQVTPNLELRIKILKKQYTGHPNVRSLLNKPFPYFYDLEVVFGRDRATGGRCKTSVEMG 447

Query: 121 SQTEKDIEEDDMDINLEDFDIPNPYGLEPPSGEDMSSIPTNMAHDAGSSRPSKKKRSYSR 180
           SQT +D EEDDMDINLE FDI NP+GLE PSGEDM S PT+M HD  SSRPSKK+RSYS 
Sbjct: 448 SQTVRDTEEDDMDINLEHFDILNPHGLELPSGEDMPSTPTSMVHDVKSSRPSKKRRSYSG 507

Query: 181 DLMDTFHVDMQEVSKEIGKIAAWQQEKMEIESSLRKLLYVE 205
           DLMDTFH  M+E SKEIGKIAAWQ+E +EIESSL K LY E
Sbjct: 508 DLMDTFHASMRETSKEIGKIAAWQRETIEIESSLHKRLYAE 548

[Close]

BLAST of PI0028801 vs. NCBI nr
Match: KAA0050106.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 298.9 bits (764), Expect = 4.2e-77
Identity = 161/236 (68.22%), Postives = 181/236 (76.69%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQVQKLMTDKIPGS 60
           MASTNSK TKHRWTTI D+ LVECL QLVEEGG RADNGTFK GYLVQVQKLM +KI GS
Sbjct: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKILGS 60

Query: 61  NIQGHPNARG---LLNKPFPYFYDL------EIVFGRDRATGGRCKTCVEMGSQTEKDIE 120
           NIQ  PN +    +L K +    ++         +  +R      K+  +   +T +DIE
Sbjct: 61  NIQVTPNLKSRVKILKKQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVKTARDIE 120

Query: 121 EDDMDINLEDFDIPNPYGLEPPSGEDMSSIPTNMAHDAGSSRPSKKKRSYSRDLMDTFHV 180
           EDDMDINLEDFDIPNP+GLEPPSGEDM S PT+MAHDAGSSRPSKK+RSYS DLMDTF  
Sbjct: 121 EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRA 180

Query: 181 DMQEVSKEIGKIAAWQQEKMEIESSLRKLLYVELQTIHGMDVDDCLIVVESLLPNP 228
            M+E SKEIGKIAAWQ+EKMEIESSL K LYV+LQTI GMDVDDCLIV ESLLP+P
Sbjct: 181 SMRETSKEIGKIAAWQREKMEIESSLHKRLYVDLQTIPGMDVDDCLIVAESLLPDP 235

[Close]

BLAST of PI0028801 vs. NCBI nr
Match: TYJ96933.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.6 bits (745), Expect = 6.7e-75
Identity = 154/237 (64.98%), Postives = 162/237 (68.35%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQVQKLMTDKIPGS 60
           MASTNSK TKHRWTTI+DDALVECL QLVEEGG RA+N TFKP YLVQVQKLM +KIP S
Sbjct: 1   MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 60

Query: 61  NIQ---------------------------------------------------GHPNAR 120
           NIQ                                                   GHPNAR
Sbjct: 61  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 120

Query: 121 GLLNKPFPYFYDLEIVFGRDRATGGRCKTCVEMGSQTEKDIEEDDMDINLEDFDIPNPYG 180
           GLLNKPF YFYDLEIVFGRD+ATGGRCK  VEM SQT +D EEDDMDINLEDFDIPNP+G
Sbjct: 121 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 180

Query: 181 LEPPSGEDMSSIPTNMAHDAGSSRPSKKKRSYSRDLMDTFHVDMQEVSKEIGKIAAW 187
           LEPPSGEDM S   +M HDAGSSRPSKK+RSY  DLMDTF   MQE SKEIGKIAAW
Sbjct: 181 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 237

[Close]

BLAST of PI0028801 vs. NCBI nr
Match: XP_008455678.1 (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 6.7e-75
Identity = 154/237 (64.98%), Postives = 162/237 (68.35%), Query Frame = 0


Query: 1   MASTNSKVTKHRWTTIEDDALVECLRQLVEEGGLRADNGTFKPGYLVQVQKLMTDKIPGS 60
           MASTNSK TKHRWTTI+DDALVECL QLVEEGG RA+N TFKP YLVQVQKLM +KIP S
Sbjct: 33  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 92

Query: 61  NIQ---------------------------------------------------GHPNAR 120
           NIQ                                                   GHPNAR
Sbjct: 93  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 152

Query: 121 GLLNKPFPYFYDLEIVFGRDRATGGRCKTCVEMGSQTEKDIEEDDMDINLEDFDIPNPYG 180
           GLLNKPF YFYDLEIVFGRD+ATGGRCK  VEM SQT +D EEDDMDINLEDFDIPNP+G
Sbjct: 153 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 212

Query: 181 LEPPSGEDMSSIPTNMAHDAGSSRPSKKKRSYSRDLMDTFHVDMQEVSKEIGKIAAW 187
           LEPPSGEDM S   +M HDAGSSRPSKK+RSY  DLMDTF   MQE SKEIGKIAAW
Sbjct: 213 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 269

The following BLAST results are available for this feature:

BLAST of PI0028801 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C7T4	3.1e-94	72.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U3R2	9.4e-83	72.40	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U7F7	2.0e-77	68.22	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BC95	3.2e-75	64.98	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C252	3.2e-75	64.98	uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 P...	[more]

BLAST of PI0028801 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07921.1	6.5e-94	72.58	hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]	[more]
KAA0048191.1	1.9e-82	72.40	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0050106.1	4.2e-77	68.22	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ96933.1	6.7e-75	64.98	retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_008455678.1	6.7e-75	64.98	PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]	[more]

BLAST of PI0028801 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..161
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 2..67 coord: 62..237
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 2..67
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 62..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028801.1	PI0028801.1	mRNA