PI0028779 (gene) Melon (PI 482460) v1

Overview


Name	PI0028779
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr06: 17681771 .. 17683160 (+)
RNA-Seq Expression	PI0028779
Synteny	PI0028779

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACTTTACTCACTTCTTTTGTGCAAGGTGGCTCTGTAAAAATTTCTAAGTGTGGGGTTTGCGGCCTAGTTGGACATCCAAATGACAAGTGCCCAGACTTAATTGAAGAAGCAAATGTCATTCGTAAGTACGATCCCCATAGTAATACGTACAATTCTGGTTGGAGAGACAACCCAAATTTAAGGTGGGGAAATGACAACCAAAGGCCTTCACAAGCAACTTCTTCTTCCTCTAACCAGGGTACAAATCTTGAAGATTTAGTAAAAGCACTAGCCACTAATACTCTCTCTTTCCAACAAGAAATGAAGCAACAAATTACTCATCTCACTATCGCTATTAGTAAGTTGGAAGGAAAAGGTAAACTTCCGGCCCAACCGGACTATGCAAATGTGAGTGCCATCTCACTTAGAAGTGGTAAGATTCTTGAAACCCCTTCAAGTGAAGAAAAAAAGGTAACTTCCAACCCTATCCTTCTTGAAAATAATAGTGAGTCTAAGGAAGAAAAAGTTGAAACAAATGTTTTACCATCCAATTCTAATAAAGGTAAATCTCCTCTTAATGATTTTACTCCTTATGTACCTAAAGCTCCTTTTCCTTCTAGGTTGGCTCCAAAGAAGAAAGAAACACCTAAGGAGGAAGAACTTTTGGAGATGTTTAGAAAAGTGCAAATCAATTTGCCTCTACTTGATGCAATTCAACAAGTTCCAAAGTATGCAAAGTTTTTAAATGAGTTGTGCACCAACAAGAGGAAAATCAAAGAAAAATCCATGGTAAATCACAATGTTTCCGCTCTTTTCAAAAATAATATTTCGAAAAAATGCAATGATCCCAGTATGTTTTCTCTTCCTTGTATAATAGGCAATAGATTAATTTCTCATGCAATGTTTGACTTAGGAGCATCCATAAATGTCATGCCATTTAATGTTTTTAAAGATCTAGAACTTAATAATTTGCAAAAAACTAGTGTATGCATACAACTAGCGGATAGATCTTTTATTTCACCGTTAGGAATAGTTGAAGATGTTCTTGTGAAAATTGACAAATTAATTTTTCCGACGGACTTTTACATTTTAGAAATGAATAAAGAATGTAAAAAACCATCTCATTCTATTTTATTAGGAAGACATTTTTTGAAAAACCGCTAAAGCTATCATAAATGTTGATAAAGGCTCCCTAAGTGTAGAGTTCGATGGATACATTGTTACATTCAATATTTTTGAACCTATAAAAAATCCGGATAAATCTTTGTCTTTATGTTCATTAGAATTGCATGATGAAGTTAATAAGTTGTTGATTGATAAATTATATCTTATATCTTTTGATTTTGATTTTATGAAGCTCTCTGACTCTTATTATATGGTGAATGGGCGGATGAAGGATGAATGA

mRNA sequence

ATGACTACTTTACTCACTTCTTTTGTGCAAGGTGGCTCTGTAAAAATTTCTAAGTGTGGGGTTTGCGGCCTAGTTGGACATCCAAATGACAAGTGCCCAGACTTAATTGAAGAAGCAAATGTCATTCGTAAGTACGATCCCCATAGTAATACGTACAATTCTGGTTGGAGAGACAACCCAAATTTAAGGTGGGGAAATGACAACCAAAGGCCTTCACAAGCAACTTCTTCTTCCTCTAACCAGGGTACAAATCTTGAAGATTTAGTAAAAGCACTAGCCACTAATACTCTCTCTTTCCAACAAGAAATGAAGCAACAAATTACTCATCTCACTATCGCTATTAGTAAGTTGGAAGGAAAAGGTAAACTTCCGGCCCAACCGGACTATGCAAATGTGAGTGCCATCTCACTTAGAAGTGGTAAGATTCTTGAAACCCCTTCAAGTGAAGAAAAAAAGGTAACTTCCAACCCTATCCTTCTTGAAAATAATAGTGAGTCTAAGGAAGAAAAAGTTGAAACAAATGTTTTACCATCCAATTCTAATAAAGAATTGCATGATGAAGTTAATAAGTTGTTGATTGATAAATTATATCTTATATCTTTTGATTTTGATTTTATGAAGCTCTCTGACTCTTATTATATGGTGAATGGGCGGATGAAGGATGAATGA

Coding sequence (CDS)

ATGACTACTTTACTCACTTCTTTTGTGCAAGGTGGCTCTGTAAAAATTTCTAAGTGTGGGGTTTGCGGCCTAGTTGGACATCCAAATGACAAGTGCCCAGACTTAATTGAAGAAGCAAATGTCATTCGTAAGTACGATCCCCATAGTAATACGTACAATTCTGGTTGGAGAGACAACCCAAATTTAAGGTGGGGAAATGACAACCAAAGGCCTTCACAAGCAACTTCTTCTTCCTCTAACCAGGGTACAAATCTTGAAGATTTAGTAAAAGCACTAGCCACTAATACTCTCTCTTTCCAACAAGAAATGAAGCAACAAATTACTCATCTCACTATCGCTATTAGTAAGTTGGAAGGAAAAGGTAAACTTCCGGCCCAACCGGACTATGCAAATGTGAGTGCCATCTCACTTAGAAGTGGTAAGATTCTTGAAACCCCTTCAAGTGAAGAAAAAAAGGTAACTTCCAACCCTATCCTTCTTGAAAATAATAGTGAGTCTAAGGAAGAAAAAGTTGAAACAAATGTTTTACCATCCAATTCTAATAAAGAATTGCATGATGAAGTTAATAAGTTGTTGATTGATAAATTATATCTTATATCTTTTGATTTTGATTTTATGAAGCTCTCTGACTCTTATTATATGGTGAATGGGCGGATGAAGGATGAATGA

Protein sequence

MTTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNPNLRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNSNKELHDEVNKLLIDKLYLISFDFDFMKLSDSYYMVNGRMKDE

Homology

[Close]

BLAST of PI0028779 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.5e-73
Identity = 139/183 (75.96%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNP 60
           MTTLLTSFVQG  +K++KCGVC LVGHPNDKCP++IE+ N++RKYDP+ NTYNSGWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGK 120
           NLRWGNDNQ+ +QA  +SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNS 180
           GKLPAQPDYANVSAISLRSGKIL+TP+++EKKVTS  + L + +ESKEEKVETN+ PSNS
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 NKE 184
             +
Sbjct: 237 KND 239

[Close]

BLAST of PI0028779 vs. ExPASy TrEMBL
Match: A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.9e-72
Identity = 138/182 (75.82%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 2   TTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNPN 61
           TTLLTSFVQG  +K++KCGVCGLVGH N+KCP++IE+ N++R+YDPHSNTYNSGWRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGKG 121
           LRWGNDNQ+ +QA S+SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNSN 181
           KLPAQ D+ANVSAISLRSGKIL+TP+++EKKVTS P+ L + +ESKEEKVETN  PSNS 
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

Query: 182 KE 184
            +
Sbjct: 389 ND 390

[Close]

BLAST of PI0028779 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.4e-71
Identity = 135/183 (73.77%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNP 60
           MTTLLTSFVQG  +K++KCGVCGLVGHPNDKCP++IE+ N++RKYDPH NTYNSGWRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGK 120
           NLRWGNDNQ+ +QA S+SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNS 180
           GKL AQ +YANVSA+SLRSGKIL+TP+++EKK TS P+ L   +E KEEK+ETN  P NS
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 NKE 184
             +
Sbjct: 322 KND 324

[Close]

BLAST of PI0028779 vs. ExPASy TrEMBL
Match: A0A5D3DCG3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold860G00100 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.6e-70
Identity = 134/183 (73.22%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNP 60
           MT LLTSFVQG  +K++KCGVCGLVGHPNDKCP++IE+ N+++KYDPH NTYNSGWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGK 120
           NLRWGNDNQ+ +QA  +SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNS 180
           GKL AQPD+ANVS ISLRS KIL+TP+++EKKVTS P+ L + +ESKEEK ETN  PSNS
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

Query: 181 NKE 184
             +
Sbjct: 181 KND 183

[Close]

BLAST of PI0028779 vs. ExPASy TrEMBL
Match: A0A1S4E3R2 (uncharacterized protein LOC107991910 OS=Cucumis melo OX=3656 GN=LOC107991910 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.6e-70
Identity = 134/183 (73.22%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNP 60
           MT LLTSFVQG  +K++KCGVCGLVGHPNDKCP++IE+ N+++KYDPH NTYNSGWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGK 120
           NLRWGNDNQ+ +QA  +SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNS 180
           GKL AQPD+ANVS ISLRS KIL+TP+++EKKVTS P+ L + +ESKEEK ETN  PSNS
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

Query: 181 NKE 184
             +
Sbjct: 181 KND 183

[Close]

BLAST of PI0028779 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 284.3 bits (726), Expect = 9.3e-73
Identity = 139/183 (75.96%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNP 60
           MTTLLTSFVQG  +K++KCGVC LVGHPNDKCP++IE+ N++RKYDP+ NTYNSGWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGK 120
           NLRWGNDNQ+ +QA  +SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNS 180
           GKLPAQPDYANVSAISLRSGKIL+TP+++EKKVTS  + L + +ESKEEKVETN+ PSNS
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 NKE 184
             +
Sbjct: 237 KND 239

[Close]

BLAST of PI0028779 vs. NCBI nr
Match: KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 281.6 bits (719), Expect = 6.0e-72
Identity = 138/182 (75.82%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 2   TTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNPN 61
           TTLLTSFVQG  +K++KCGVCGLVGH N+KCP++IE+ N++R+YDPHSNTYNSGWRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGKG 121
           LRWGNDNQ+ +QA S+SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNSN 181
           KLPAQ D+ANVSAISLRSGKIL+TP+++EKKVTS P+ L + +ESKEEKVETN  PSNS 
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

Query: 182 KE 184
            +
Sbjct: 389 ND 390

[Close]

BLAST of PI0028779 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 279.3 bits (713), Expect = 3.0e-71
Identity = 135/183 (73.77%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNP 60
           MTTLLTSFVQG  +K++KCGVCGLVGHPNDKCP++IE+ N++RKYDPH NTYNSGWRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGK 120
           NLRWGNDNQ+ +QA S+SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNS 180
           GKL AQ +YANVSA+SLRSGKIL+TP+++EKK TS P+ L   +E KEEK+ETN  P NS
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 NKE 184
             +
Sbjct: 322 KND 324

[Close]

BLAST of PI0028779 vs. NCBI nr
Match: XP_016902871.1 (PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 9.6e-70
Identity = 134/183 (73.22%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNP 60
           MT LLTSFVQG  +K++KCGVCGLVGHPNDKCP++IE+ N+++KYDPH NTYNSGWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGK 120
           NLRWGNDNQ+ +QA  +SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNS 180
           GKL AQPD+ANVS ISLRS KIL+TP+++EKKVTS P+ L + +ESKEEK ETN  PSNS
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

Query: 181 NKE 184
             +
Sbjct: 181 KND 183

[Close]

BLAST of PI0028779 vs. NCBI nr
Match: KAA0051761.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21361.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 9.6e-70
Identity = 134/183 (73.22%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKISKCGVCGLVGHPNDKCPDLIEEANVIRKYDPHSNTYNSGWRDNP 60
           MT LLTSFVQG  +K++KCGVCGLVGHPNDKCP++IE+ N+++KYDPH NTYNSGWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRWGNDNQRPSQATSSSSNQGTNLEDLVKALATNTLSFQQEMKQQITHLTIAISKLEGK 120
           NLRWGNDNQ+ +QA  +SSNQGTNLED++KALATNTLSFQQEMKQQ+T LT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLPAQPDYANVSAISLRSGKILETPSSEEKKVTSNPILLENNSESKEEKVETNVLPSNS 180
           GKL AQPD+ANVS ISLRS KIL+TP+++EKKVTS P+ L + +ESKEEK ETN  PSNS
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

Query: 181 NKE 184
             +
Sbjct: 181 KND 183

The following BLAST results are available for this feature:

BLAST of PI0028779 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028779 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBZ4	4.5e-73	75.96	Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7VQ60	2.9e-72	75.82	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3CRR8	1.4e-71	73.77	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3DCG3	4.6e-70	73.22	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S4E3R2	4.6e-70	73.22	uncharacterized protein LOC107991910 OS=Cucumis melo OX=3656 GN=LOC107991910 PE=...	[more]

BLAST of PI0028779 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33993.1	9.3e-73	75.96	retrotransposon gag protein [Cucumis melo subsp. melo]	[more]
KAA0067359.1	6.0e-72	75.82	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotranspos...	[more]
KAA0047407.1	3.0e-71	73.77	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos...	[more]
XP_016902871.1	9.6e-70	73.22	PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]	[more]
KAA0051761.1	9.6e-70	73.22	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21361.1 retrotranspos...	[more]

BLAST of PI0028779 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028779.1	PI0028779.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding