PI0027875 (gene) Melon (PI 482460) v1

Overview
NamePI0027875
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionSerine/threonine-protein kinase atg1-like
Locationchr05: 9225481 .. 9226278 (-)
RNA-Seq ExpressionPI0027875
SyntenyPI0027875
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAACCTTCTGAAATCTAGGGCAATATCCCAGGTTAATGCCGCCAGAAGCTCTATGTAGGCGGTGAATCAAATTTATGACTTGGGATGTGTGGGATGCGGCGGTCCTCATAATACTGACGCGTGTTAACTAAATACTGAGACTGTCGTGTTCGTAAGGAACGATCCTTTCTCCAATACCTACAACCCTGGTTAGAGAAACCATCATAACTTTAGATAGGGAGGAACGGGTCAACAAAATCAAGGGCGACATGGTGATCAAAGTGACCATCGTGGGGAAGCATCTGGCTCCCACGCAAGGTACCACAACAACAGACCACAACATCCCCAACATCAACAGCAACACACCACCACTACTCCATCCACTTCCTCATTTATGGAAAACCTCCTCCGCGAATATATGCAGAAGAATGATGCCCTTCTGCAAAGCCAAGCGTCATCCATTCGCAATCTGAAAGTACAGTTAGGGCAGTTAGCCAGCGACTTCTCTAAAAGGCCGCAAAGATCCCTCCTAAGCAATACAGAAATGCCAAATCAGGCGGGAGGATCTGGAAAAGAGAAGTGTCACGCAGTGACACTACGAAGCGGAAGGAATTTGACCATCCGCGATCCTGACTCCAAACGTAGCACTCCCAGTTCTCACTCTACTACCGAGATTGGCAGTTCAACTAACAATTCTAATCTTGTGAATTTCTCTTTAACTAATAATGTTTCTTCCTTGCAGAATAAAGACGCACCAAACAAGGGCGTGGAGAGCATGAGGCAACGTGAACAACGGGGTGAAGCATCTCAATAG

mRNA sequence

ATGAACAACCTTCTGAAATCTAGGGCAATATCCCAGGGAGGAACGGGTCAACAAAATCAAGGGCGACATGGTGATCAAAGTGACCATCGTGGGGAAGCATCTGGCTCCCACGCAAGGTACCACAACAACAGACCACAACATCCCCAACATCAACAGCAACACACCACCACTACTCCATCCACTTCCTCATTTATGGAAAACCTCCTCCGCGAATATATGCAGAAGAATGATGCCCTTCTGCAAAGCCAAGCGTCATCCATTCGCAATCTGAAAGTACAGTTAGGGCAGTTAGCCAGCGACTTCTCTAAAAGGCCGCAAAGATCCCTCCTAAGCAATACAGAAATGCCAAATCAGGCGGGAGGATCTGGAAAAGAGAAGTGTCACGCAGTGACACTACGAAGCGGAAGGAATTTGACCATCCGCGATCCTGACTCCAAACGTAGCACTCCCAGTTCTCACTCTACTACCGAGATTGGCAGTTCAACTAACAATTCTAATCTTGTGAATTTCTCTTTAACTAATAATGTTTCTTCCTTGCAGAATAAAGACGCACCAAACAAGGGCGTGGAGAGCATGAGGCAACGTGAACAACGGGGTGAAGCATCTCAATAG

Coding sequence (CDS)

ATGAACAACCTTCTGAAATCTAGGGCAATATCCCAGGGAGGAACGGGTCAACAAAATCAAGGGCGACATGGTGATCAAAGTGACCATCGTGGGGAAGCATCTGGCTCCCACGCAAGGTACCACAACAACAGACCACAACATCCCCAACATCAACAGCAACACACCACCACTACTCCATCCACTTCCTCATTTATGGAAAACCTCCTCCGCGAATATATGCAGAAGAATGATGCCCTTCTGCAAAGCCAAGCGTCATCCATTCGCAATCTGAAAGTACAGTTAGGGCAGTTAGCCAGCGACTTCTCTAAAAGGCCGCAAAGATCCCTCCTAAGCAATACAGAAATGCCAAATCAGGCGGGAGGATCTGGAAAAGAGAAGTGTCACGCAGTGACACTACGAAGCGGAAGGAATTTGACCATCCGCGATCCTGACTCCAAACGTAGCACTCCCAGTTCTCACTCTACTACCGAGATTGGCAGTTCAACTAACAATTCTAATCTTGTGAATTTCTCTTTAACTAATAATGTTTCTTCCTTGCAGAATAAAGACGCACCAAACAAGGGCGTGGAGAGCATGAGGCAACGTGAACAACGGGGTGAAGCATCTCAATAG

Protein sequence

MNNLLKSRAISQGGTGQQNQGRHGDQSDHRGEASGSHARYHNNRPQHPQHQQQHTTTTPSTSSFMENLLREYMQKNDALLQSQASSIRNLKVQLGQLASDFSKRPQRSLLSNTEMPNQAGGSGKEKCHAVTLRSGRNLTIRDPDSKRSTPSSHSTTEIGSSTNNSNLVNFSLTNNVSSLQNKDAPNKGVESMRQREQRGEASQ
Homology
BLAST of PI0027875 vs. ExPASy TrEMBL
Match: A0A5A7TGS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00540 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.9e-34
Identity = 89/136 (65.44%), Postives = 107/136 (78.68%), Query Frame = 0

Query: 67  NLLREYMQKNDALLQSQASSIRNLKVQLGQLASDFSKRPQRSLLSNTEMPNQAGGSGKEK 126
           N ++   Q NDALLQSQASSI+NL++QLGQL S+ S+RP+ SL SNTE PNQ GGSGKEK
Sbjct: 18  NFIQAMQQWNDALLQSQASSIKNLELQLGQLFSNISRRPKGSLPSNTETPNQVGGSGKEK 77

Query: 127 CHAVTLRSGRNLTIRDPDSKRSTPSSHSTTEIGSSTNNSNLVNFSLTNNVSSLQNKDAPN 186
           C  VTLRS RNLTIR+P  +R   +S STT+IGS++N+SN +N SLTNN SSLQNK+ PN
Sbjct: 78  CQVVTLRSRRNLTIREPKFERRNSTSTSTTKIGSASNDSNPLNSSLTNNTSSLQNKNIPN 137

Query: 187 KGVESMRQREQRGEAS 203
           K VES R+ EQR E S
Sbjct: 138 KEVESTRREEQRDEES 153

BLAST of PI0027875 vs. ExPASy TrEMBL
Match: A0A5D3DWD5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00200 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.4e-19
Identity = 64/103 (62.14%), Postives = 76/103 (73.79%), Query Frame = 0

Query: 20  QGRHGDQSDHRGEASGSHARYHNNRPQH--PQHQQQHTTTTPSTSSFMENLLREYMQKND 79
           Q   G Q  + G+ASG   R H +RP H  PQ QQQ TT TPS SS ME L+R YM++ND
Sbjct: 11  QNIDGGQGSYHGKASGYRQRQHQDRPHHSTPQ-QQQATTNTPSFSSSMETLIRGYMKRND 70

Query: 80  ALLQSQASSIRNLKVQLGQLASDFSKRPQRSLLSNTEMPNQAG 121
           ALLQSQA+SIRNL++Q+GQ+A DFS+RPQ  L SNTEM NQAG
Sbjct: 71  ALLQSQATSIRNLELQMGQIAIDFSERPQVFLPSNTEMSNQAG 112

BLAST of PI0027875 vs. ExPASy TrEMBL
Match: A0A0A0KN83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G403040 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17
Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 0

Query: 65  MENLLREYMQKNDALLQSQASSIRNLKVQLGQLASDFSKRPQRSLLSNTEMPNQAGGSGK 124
           ME L REYMQ+NDALLQSQASSI+NL++QLGQLA+D S+RP+ +LL NT+ P Q GGS  
Sbjct: 48  MEALFREYMQRNDALLQSQASSIKNLELQLGQLANDVSERPKGALLCNTKTPIQRGGSSN 107

Query: 125 EKCHAVTLRSGRNLTIRDPDSKR 148
           +K   VTLRS RNLTI + +S++
Sbjct: 108 KKSQLVTLRSRRNLTIHELESEQ 130

BLAST of PI0027875 vs. ExPASy TrEMBL
Match: A0A0A0KMN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G055570 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.2e-17
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 0

Query: 31  GEASGSHARYHNNRPQHP-QHQQQHTTTTPSTSS----FMENLLREYMQKNDALLQSQAS 90
           GE SG   R ++  PQ P QH   H      +SS     ME+L +EYMQ+NDALLQSQA+
Sbjct: 31  GEVSGYCPRKYHEWPQQPIQHLNHHILNQSHSSSSSLPSMESLFQEYMQRNDALLQSQAA 90

Query: 91  SIRNLKVQLGQLASDFSKRPQRSLLSNTEMPNQAGGSGKEKCHAVTL 133
           SI+NL++Q+GQ+A+D S++P+ +L SNTE+P Q G SGKEKC AVTL
Sbjct: 91  SIKNLELQMGQIANDISRQPKGTLPSNTEIPIQGGSSGKEKCQAVTL 137

BLAST of PI0027875 vs. ExPASy TrEMBL
Match: A0A5A7VPF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001170 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.3e-14
Identity = 54/83 (65.06%), Postives = 60/83 (72.29%), Query Frame = 0

Query: 120 GGSGKEKCHAVTLRSGRNLTIRDPDSKRSTPSSHSTTEIGSSTNNSNLVNFSLTNNVSSL 179
           G S KEK   VTLRSGRNLTIR PDS+   P+S STTEI SS+ NS   NFSL N+ SSL
Sbjct: 83  GASRKEKGQVVTLRSGRNLTIRKPDSECRNPTSASTTEIDSSSKNSQASNFSLINDASSL 142

Query: 180 QNKDAPNKGVESMRQREQRGEAS 203
           QN + PNK VES R+ E RGEAS
Sbjct: 143 QNNNEPNKEVESTRREEPRGEAS 165

BLAST of PI0027875 vs. NCBI nr
Match: KAA0041246.1 (uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa] >TYK16045.1 uncharacterized protein E5676_scaffold32G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 155.2 bits (391), Expect = 5.9e-34
Identity = 89/136 (65.44%), Postives = 107/136 (78.68%), Query Frame = 0

Query: 67  NLLREYMQKNDALLQSQASSIRNLKVQLGQLASDFSKRPQRSLLSNTEMPNQAGGSGKEK 126
           N ++   Q NDALLQSQASSI+NL++QLGQL S+ S+RP+ SL SNTE PNQ GGSGKEK
Sbjct: 18  NFIQAMQQWNDALLQSQASSIKNLELQLGQLFSNISRRPKGSLPSNTETPNQVGGSGKEK 77

Query: 127 CHAVTLRSGRNLTIRDPDSKRSTPSSHSTTEIGSSTNNSNLVNFSLTNNVSSLQNKDAPN 186
           C  VTLRS RNLTIR+P  +R   +S STT+IGS++N+SN +N SLTNN SSLQNK+ PN
Sbjct: 78  CQVVTLRSRRNLTIREPKFERRNSTSTSTTKIGSASNDSNPLNSSLTNNTSSLQNKNIPN 137

Query: 187 KGVESMRQREQRGEAS 203
           K VES R+ EQR E S
Sbjct: 138 KEVESTRREEQRDEES 153

BLAST of PI0027875 vs. NCBI nr
Match: TYK27798.1 (hypothetical protein E5676_scaffold749G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 9.2e-19
Identity = 64/103 (62.14%), Postives = 76/103 (73.79%), Query Frame = 0

Query: 20  QGRHGDQSDHRGEASGSHARYHNNRPQH--PQHQQQHTTTTPSTSSFMENLLREYMQKND 79
           Q   G Q  + G+ASG   R H +RP H  PQ QQQ TT TPS SS ME L+R YM++ND
Sbjct: 11  QNIDGGQGSYHGKASGYRQRQHQDRPHHSTPQ-QQQATTNTPSFSSSMETLIRGYMKRND 70

Query: 80  ALLQSQASSIRNLKVQLGQLASDFSKRPQRSLLSNTEMPNQAG 121
           ALLQSQA+SIRNL++Q+GQ+A DFS+RPQ  L SNTEM NQAG
Sbjct: 71  ALLQSQATSIRNLELQMGQIAIDFSERPQVFLPSNTEMSNQAG 112

BLAST of PI0027875 vs. NCBI nr
Match: WP_217833224.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-17
Identity = 54/83 (65.06%), Postives = 63/83 (75.90%), Query Frame = 0

Query: 62  SSFMENLLREYMQKNDALLQSQASSIRNLKVQLGQLASDFSKRPQRSLLSNTEMPNQAGG 121
           SS ME LL+EYMQKNDAL+Q+QASSIRNLK+QLGQ+A +F  R + SL SNTE P   G 
Sbjct: 1   SSSMEALLKEYMQKNDALMQTQASSIRNLKLQLGQIAGEFKTRQKGSLPSNTEAPRGMGS 60

Query: 122 SGKEKCHAVTLRSGRNLTIRDPD 145
           SGKE+C AVTLRSG+ L     D
Sbjct: 61  SGKEQCQAVTLRSGKVLHTETQD 83

BLAST of PI0027875 vs. NCBI nr
Match: KGN51008.1 (hypothetical protein Csa_008461 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-17
Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 0

Query: 65  MENLLREYMQKNDALLQSQASSIRNLKVQLGQLASDFSKRPQRSLLSNTEMPNQAGGSGK 124
           ME L REYMQ+NDALLQSQASSI+NL++QLGQLA+D S+RP+ +LL NT+ P Q GGS  
Sbjct: 48  MEALFREYMQRNDALLQSQASSIKNLELQLGQLANDVSERPKGALLCNTKTPIQRGGSSN 107

Query: 125 EKCHAVTLRSGRNLTIRDPDSKR 148
           +K   VTLRS RNLTI + +S++
Sbjct: 108 KKSQLVTLRSRRNLTIHELESEQ 130

BLAST of PI0027875 vs. NCBI nr
Match: XP_030495102.1 (uncharacterized protein LOC115710889 [Cannabis sativa])

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-14
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 0

Query: 46  QHPQHQQQHTTTTPSTSSFMENLLREYMQKNDALLQSQASSIRNLKVQLGQLASDFSKRP 105
           Q P+ QQ H      TSS +E+L+R+YM KNDA++QSQA+S+RNL+VQLGQLA+D   RP
Sbjct: 26  QQPRPQQPHQPQGSQTSS-LESLMRDYMTKNDAVIQSQAASLRNLEVQLGQLANDLKNRP 85

Query: 106 QRSLLSNTEMPNQAGGSGKEKCHAVTLRSGRNLTIRDPDSKRSTPSS 153
           Q +L S+TE P +    GKE C A+TLRSG+ L      +    PSS
Sbjct: 86  QGTLPSDTENPRR---DGKEHCKAITLRSGKILESNVVATSSKEPSS 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TGS22.9e-3465.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DWD54.4e-1962.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KN831.4e-1763.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G403040 PE=4 SV=1[more]
A0A0A0KMN34.2e-1754.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G055570 PE=4 SV=1[more]
A0A5A7VPF74.3e-1465.06Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0041246.15.9e-3465.44uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa] >TYK... [more]
TYK27798.19.2e-1962.14hypothetical protein E5676_scaffold749G00200 [Cucumis melo var. makuwa][more]
WP_217833224.12.3e-1765.06hypothetical protein, partial [Synechococcus sp. PCC 7002][more]
KGN51008.13.0e-1763.86hypothetical protein Csa_008461 [Cucumis sativus][more]
XP_030495102.13.1e-1451.40uncharacterized protein LOC115710889 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..61

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027875.1PI0027875.1mRNA