Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGTGGGTCTCCGAGATCCTTTCGATGACCTATGTTGTGTTGAAGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAACGGAACCGGGGAAAGTATACAGAAAAGACAGTTCTTTTCTATTCTATTAGTATTAGATTAGTATTAGTTAGTGATCTCGGCTCAGTGAGTCCTTTCTTCCGTGATGAACTGTTGGCACCAGTCCTCCATTTTGTCTCTGTGGATCGAGGAGAAGGGGGCTCGGCGGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGGTCAACCTCTTTCAAATATACAACATGGATTCTGGCAATGCAATGTAGTTGGACTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGGTAGGACATGTATTTCTATTACTATGAAATTCATAAATGAAGTAGTAATGGTGGGGTTACCATTATCCTTTTGCAATGACGAATCTTGTATGTGTTCCGAAGAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAACATAAAAACTCTGGAATGGAAATGGAAAAGAGATGTAACTCCAGTTCCTTCGGAAATGGTAAGATCTTTGGCACAAGAAGAAGGGGTTGATCCATATCATCTTGACTGGGTTCTGATTTCTCTATTTTTTTAATAACCGAGTTGGGTTCTTTTCCTACCCGTATCGAATAGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGAAAATCGTACGGTTTTATGA
mRNA sequence
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAACGGAACCGGGGAAATCCTCCATTTTGTCTCTGTGGATCGAGGAGAAGGGGGCTCGGCGGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGTTGGACTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAACATAAAAACTCTGGAATGGAAATGGAAAAGAGATGTAACTCCAGTTCCTTCGGAAATGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGAAAATCGTACGGTTTTATGA
Coding sequence (CDS)
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAACGGAACCGGGGAAATCCTCCATTTTGTCTCTGTGGATCGAGGAGAAGGGGGCTCGGCGGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGTTGGACTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAACATAAAAACTCTGGAATGGAAATGGAAAAGAGATGTAACTCCAGTTCCTTCGGAAATGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGAAAATCGTACGGTTTTATGA
Protein sequence
MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSILSLWIEEKGARREEDCNMREARSWTLMSIRMNHPFHGGKSLPARQEDKKLFIFRGLEGAWKHKNSGMEMEKRCNSSSFGNEHAEPNLLHVKPALFRSENRTVL
Homology
BLAST of PI0026492 vs. ExPASy TrEMBL
Match:
A0A0A0L231 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628320 PE=4 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 118/149 (79.19%), Postives = 118/149 (79.19%), Query Frame = 0
Query: 1 MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSILSLWIEEKGARREEDC 60
MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSI SLWIEEKG
Sbjct: 1 MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSIFSLWIEEKGGSAGRG- 60
Query: 61 NMREARSWTLMSIRMNHPFHGGKSLPARQEDKKLFI-------FRG-LEGAWKHKNSGME 120
WTLMSIRMNHPFHGGKSLPARQED KL I F G G HKNSGME
Sbjct: 61 ------FWTLMSIRMNHPFHGGKSLPARQEDSKLQILSRKVVHFSGSRRGVETHKNSGME 120
Query: 121 MEKRCNSSSFGNEHAEPNLLHVKPALFRS 142
MEKRCNSSSFGNEHAEPNLLHVKPALFRS
Sbjct: 121 MEKRCNSSSFGNEHAEPNLLHVKPALFRS 142
BLAST of PI0026492 vs. ExPASy TrEMBL
Match:
A0A2P5XUU9 (Uncharacterized protein ycf68 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA13525 PE=3 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 5.1e-25
Identity = 69/126 (54.76%), Postives = 77/126 (61.11%), Query Frame = 0
Query: 1 MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSI--LSLWIEEKGARREE 60
M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGKS I K A++E
Sbjct: 1 MWLCTLRIGIHFLKDPGFRALGYLYDPIGCVKLAITTEPGKSYIPFCLCGPRRKAAQQEG 60
Query: 61 DCNMREA----------------RSWTLMSIRMNHPFHGGKSLPARQEDKK--LFIFRGL 107
DC MREA RSW M IRMNH FHG +L + +K L FRGL
Sbjct: 61 DCTMREARRSTSFKYTTWVLEMQRSWAFMRIRMNHLFHGVTNLVCVPKKRKEILSKFRGL 120
BLAST of PI0026492 vs. ExPASy TrEMBL
Match:
A0A6A5N1D4 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043441 PE=4 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 1.2e-10
Identity = 38/61 (62.30%), Postives = 41/61 (67.21%), Query Frame = 0
Query: 52 KGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDKKLF 97
KGA+R+EDCNMREAR WTLMSIR+NHPFHGGKSLPARQED K
Sbjct: 17 KGAQRQEDCNMREARRSTSFKYTTWVLAMQCGWTLMSIRINHPFHGGKSLPARQEDSKFE 76
BLAST of PI0026492 vs. ExPASy TrEMBL
Match:
A0A444ZST6 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g061995 PE=4 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 1.0e-09
Identity = 41/74 (55.41%), Postives = 47/74 (63.51%), Query Frame = 0
Query: 41 KSSILSLWI--EEKGARREEDCNMREAR----------------SWTLMSIRMNHPFHGG 97
+S ILSL+ KGA+R+EDCN+REAR WTLMSIR N+PFH G
Sbjct: 6 QSYILSLFCGPRRKGAQRQEDCNIREARRSTSFKYTTWVLAMQCGWTLMSIRTNYPFHRG 65
BLAST of PI0026492 vs. ExPASy TrEMBL
Match:
A0A5N5IXQ9 (Uncharacterized protein ycf68 OS=Salix brachista OX=2182728 GN=DKX38_030151 PE=3 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 1.4e-09
Identity = 38/57 (66.67%), Postives = 42/57 (73.68%), Query Frame = 0
Query: 41 KSSILSLWIEEKGARREEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDKKLFI 97
+S ILSLW EEK A + + + SWTLMSIRMNHPFHGGKSLPARQED KL I
Sbjct: 6 QSYILSLWTEEKSASFKYTTWILAIQWSWTLMSIRMNHPFHGGKSLPARQEDSKLQI 62
BLAST of PI0026492 vs. NCBI nr
Match:
PPS07120.1 (hypothetical protein GOBAR_AA13525 [Gossypium barbadense])
HSP 1 Score: 124.0 bits (310), Expect = 1.1e-24
Identity = 69/126 (54.76%), Postives = 77/126 (61.11%), Query Frame = 0
Query: 1 MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSI--LSLWIEEKGARREE 60
M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGKS I K A++E
Sbjct: 1 MWLCTLRIGIHFLKDPGFRALGYLYDPIGCVKLAITTEPGKSYIPFCLCGPRRKAAQQEG 60
Query: 61 DCNMREA----------------RSWTLMSIRMNHPFHGGKSLPARQEDKK--LFIFRGL 107
DC MREA RSW M IRMNH FHG +L + +K L FRGL
Sbjct: 61 DCTMREARRSTSFKYTTWVLEMQRSWAFMRIRMNHLFHGVTNLVCVPKKRKEILSKFRGL 120
BLAST of PI0026492 vs. NCBI nr
Match:
KAF1876802.1 (hypothetical protein Lal_00043441 [Lupinus albus])
HSP 1 Score: 76.3 bits (186), Expect = 2.5e-10
Identity = 38/61 (62.30%), Postives = 41/61 (67.21%), Query Frame = 0
Query: 52 KGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDKKLF 97
KGA+R+EDCNMREAR WTLMSIR+NHPFHGGKSLPARQED K
Sbjct: 17 KGAQRQEDCNMREARRSTSFKYTTWVLAMQCGWTLMSIRINHPFHGGKSLPARQEDSKFE 76
BLAST of PI0026492 vs. NCBI nr
Match:
RYR17226.1 (hypothetical protein Ahy_B03g061995 [Arachis hypogaea])
HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09
Identity = 41/74 (55.41%), Postives = 47/74 (63.51%), Query Frame = 0
Query: 41 KSSILSLWI--EEKGARREEDCNMREAR----------------SWTLMSIRMNHPFHGG 97
+S ILSL+ KGA+R+EDCN+REAR WTLMSIR N+PFH G
Sbjct: 6 QSYILSLFCGPRRKGAQRQEDCNIREARRSTSFKYTTWVLAMQCGWTLMSIRTNYPFHRG 65
BLAST of PI0026492 vs. NCBI nr
Match:
KAB5511226.1 (hypothetical protein DKX38_030151 [Salix brachista])
HSP 1 Score: 72.8 bits (177), Expect = 2.8e-09
Identity = 38/57 (66.67%), Postives = 42/57 (73.68%), Query Frame = 0
Query: 41 KSSILSLWIEEKGARREEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDKKLFI 97
+S ILSLW EEK A + + + SWTLMSIRMNHPFHGGKSLPARQED KL I
Sbjct: 6 QSYILSLWTEEKSASFKYTTWILAIQWSWTLMSIRMNHPFHGGKSLPARQEDSKLQI 62
BLAST of PI0026492 vs. NCBI nr
Match:
PNT08288.1 (hypothetical protein POPTR_013G139100 [Populus trichocarpa])
HSP 1 Score: 71.6 bits (174), Expect = 6.2e-09
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 41 KSSILSLWIEEKGARREEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDKKLFIFRG 100
+S ILSLW EEK A + + + SWTLMSIRMNHPFHG +L + + L IFRG
Sbjct: 6 QSYILSLWTEEKSASFKYTTWILAIQWSWTLMSIRMNHPFHGVMNLVCVPKKRNLSIFRG 65
Query: 101 LEGAWKH 107
L+GAWKH
Sbjct: 66 LKGAWKH 72
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L231 | 2.5e-56 | 79.19 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628320 PE=4 SV=1 | [more] |
A0A2P5XUU9 | 5.1e-25 | 54.76 | Uncharacterized protein ycf68 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA13525 P... | [more] |
A0A6A5N1D4 | 1.2e-10 | 62.30 | Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043441 PE=4 SV=1 | [more] |
A0A444ZST6 | 1.0e-09 | 55.41 | Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g061995 PE=4 SV=1 | [more] |
A0A5N5IXQ9 | 1.4e-09 | 66.67 | Uncharacterized protein ycf68 OS=Salix brachista OX=2182728 GN=DKX38_030151 PE=3... | [more] |
Match Name | E-value | Identity | Description | |
PPS07120.1 | 1.1e-24 | 54.76 | hypothetical protein GOBAR_AA13525 [Gossypium barbadense] | [more] |
KAF1876802.1 | 2.5e-10 | 62.30 | hypothetical protein Lal_00043441 [Lupinus albus] | [more] |
RYR17226.1 | 2.1e-09 | 55.41 | hypothetical protein Ahy_B03g061995 [Arachis hypogaea] | [more] |
KAB5511226.1 | 2.8e-09 | 66.67 | hypothetical protein DKX38_030151 [Salix brachista] | [more] |
PNT08288.1 | 6.2e-09 | 55.22 | hypothetical protein POPTR_013G139100 [Populus trichocarpa] | [more] |
Match Name | E-value | Identity | Description | |