Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTGGATTGTCTTCGGGTGTTTCTTACTTAGGAGGAATTTCGCTTGTATTGGGGTTGCCCATGGGAAGTTTCCAGACTGAGGATGCGTAGATGTGGCATTTTGATTCTAAAGGGTTTTATTCTGTTAAGAGTGGTTATCGAATTTTTATGGAGCACAAACATTCTGCTGGGTGTTCCGAGTTGTTGCAGGTGAGGAGATGGTGGAAGCAACTTTGGAGTTTGAAGATTCCTAATAAAGTTAAAAAATTTATTTGGCGTGCCTTCCATCCGGTTCTTTCTATTATGACAAGTCTTGTGGATCGTAGAGTGCCTGTTTCCTCTTATTGTCTTTTTGTAGAAAGCATCTTGAAATTATTCTGCATGTGCTTCTTTGTTGTAAAAGAGCGCAAGAAATTTGGTCTCTTTTGCTACCTCATGTTTTGTAGGTGGGGAAAGGGATTGGGGACTTAGCTGAGCTTTGTTTTGTGTTGGTGGATTCCCTTTCCACTTTGGATTTGGTGATCTGGTGCATTGAGTGTTGGGGTATTTAGAATGATCGAATGGTTTACGTATGCAGGGTGTAATGCCTGAAGCTGTTTTAATATGCCATTGGTTACATAATTATTCGCAGGAATTCCAACATCTCGTTTGCTAGCTTCCTCGCATTGGTGTTTCTGATCCGCGACAGTTTATTAGGCTTCCGAGACATGGTTGTGGCATGTTTGTGGATGCATCCTGCTCGGCGTTTCGGGGTGTGACGAGGCTTGGTGTAGTCATAGTTGATGAGCATGGTTCTATTGTGGGGGCGACGACTAAGTCAGCTTCAGGCCTGTATGCTCCTTTATTGGCTGAAATGTCGGCGATTAAAAAGGGAGTACGGTTTGCTTCTTGCTTCTGGGGTGTTTTCTCTAATTGTCATAATGCAGTCAGATTACTCTGTGGGCTTTCTGATTCTATTGCTGAAGTTGGGGTCTTTGTCGCTGACATCAAAGCTATGTTGTCTGCATTCCGGGGTATGGAGTTTCACTATATTGGCAAATAA
mRNA sequence
ATGGAATTTGGATTGTCTTCGGGTGTTTCTTACTTAGGAGGAATTTCGCTTAGTGGTTATCGAATTTTTATGGAGCACAAACATTCTGCTGGGTGTTCCGAGTTGTTGCAGGTGAGGAGATGGTGGAAGCAACTTTGGAGTTTGAAGATTCCTAATAAAGTTAAAAAATTTATTTGGCGTGCCTTCCATCCGGTGGGGAAAGGGATTGGGGACTTAGCTGAGCTTTGTTTTGTGTTGGTGGATTCCCTTTCCACTTTGGATTTGCTTCCTCGCATTGGTGTTTCTGATCCGCGACAGTTTATTAGGCTTCCGAGACATGGTTGTGGCATGTTTGTGGATGCATCCTGCTCGGCGTTTCGGGGTGTGACGAGGCTTGGTGTAGTCATAGTTGATGAGCATGGTTCTATTGTGGGGGCGACGACTAAGTCAGCTTCAGGCCTGTATGCTCCTTTATTGGCTGAAATGTCGGCGATTAAAAAGGGAGTACGGTTTGCTTCTTGCTTCTGGGGTGTTTTCTCTAATTGTCATAATGCAGTCAGATTACTCTGTGGGCTTTCTGATTCTATTGCTGAAGTTGGGGTCTTTGTCGCTGACATCAAAGCTATGTTGTCTGCATTCCGGGGTATGGAGTTTCACTATATTGGCAAATAA
Coding sequence (CDS)
ATGGAATTTGGATTGTCTTCGGGTGTTTCTTACTTAGGAGGAATTTCGCTTAGTGGTTATCGAATTTTTATGGAGCACAAACATTCTGCTGGGTGTTCCGAGTTGTTGCAGGTGAGGAGATGGTGGAAGCAACTTTGGAGTTTGAAGATTCCTAATAAAGTTAAAAAATTTATTTGGCGTGCCTTCCATCCGGTGGGGAAAGGGATTGGGGACTTAGCTGAGCTTTGTTTTGTGTTGGTGGATTCCCTTTCCACTTTGGATTTGCTTCCTCGCATTGGTGTTTCTGATCCGCGACAGTTTATTAGGCTTCCGAGACATGGTTGTGGCATGTTTGTGGATGCATCCTGCTCGGCGTTTCGGGGTGTGACGAGGCTTGGTGTAGTCATAGTTGATGAGCATGGTTCTATTGTGGGGGCGACGACTAAGTCAGCTTCAGGCCTGTATGCTCCTTTATTGGCTGAAATGTCGGCGATTAAAAAGGGAGTACGGTTTGCTTCTTGCTTCTGGGGTGTTTTCTCTAATTGTCATAATGCAGTCAGATTACTCTGTGGGCTTTCTGATTCTATTGCTGAAGTTGGGGTCTTTGTCGCTGACATCAAAGCTATGTTGTCTGCATTCCGGGGTATGGAGTTTCACTATATTGGCAAATAA
Protein sequence
MEFGLSSGVSYLGGISLSGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHGCGMFVDASCSAFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGMEFHYIGK
Homology
BLAST of PI0026311 vs. ExPASy TrEMBL
Match:
A0A5A7VQ24 (Adenylate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00510 PE=3 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 2.7e-14
Identity = 70/221 (31.67%), Postives = 92/221 (41.63%), Query Frame = 0
Query: 18 SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPV------------ 77
SGYR+FM H + GCS+ + WW +LW L IP K+K +WRAFH +
Sbjct: 81 SGYRLFMFHHNMIGCSDSSVTKHWWIRLWKLNIPAKIKILMWRAFHMILPVLTCLVDRRM 140
Query: 78 ---------GKG-------------------------------IGDLAELCFVLVDSLST 137
GK D ++ C VL DSLS
Sbjct: 141 DISPLCPYCGKHPETITQVVFGCRLAKELWKCFLPVVLSGRNYYFDFSDFCVVLADSLSP 200
Query: 138 LDL----LPRIGVSDPRQFIRLPRHGCGMF--VDASC----SAFRG----------VTRL 167
LD + G+ D R+ CG+ VDA C S RG + +
Sbjct: 201 LDFSLWCIGCWGLWDDHNDFRV----CGVVLDVDAKCWWLSSYVRGNGSTSSPGWNIWGV 260
BLAST of PI0026311 vs. ExPASy TrEMBL
Match:
A0A803NLN2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 72.0 bits (175), Expect = 3.4e-09
Identity = 52/201 (25.87%), Postives = 86/201 (42.79%), Query Frame = 0
Query: 18 SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCF 77
SGYR+ + S ++ RWW ++W LK+P KVK F+W+ H
Sbjct: 123 SGYRVAAALREELHHSNVVDSERWWTEMWRLKVPPKVKHFVWKVCH-------SWLPTYA 182
Query: 78 VLVDSLSTLDLLPRIGVSDPRQFIRLPRHGC--GMFVDASCSAFRGVTRLGVVIVDEHGS 137
VL L R S + + GC G+ V C + + + G+V +E+G
Sbjct: 183 VLSQHKVAFSPLCRCCSSGKNEDVGHMLWGCSPGVRVWKRCELWSDIKK-GLVTRNENGQ 242
Query: 138 IVGATTKSASGLYAPLLAEMSA----IKKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAE 197
+ AT SG PL AE+ A I G++ + V S+C A+ L+ + + +
Sbjct: 243 SIFATVTPRSGAVTPLAAELEAILDGISAGIQRGLMRFTVESDCLQAINLIEKVHEGCRD 302
Query: 198 VGVFVADIKAMLSAFRGMEFH 213
V + +I+ +L + H
Sbjct: 303 VNGLIFEIRKLLQSHNAFARH 315
BLAST of PI0026311 vs. ExPASy TrEMBL
Match:
A0A803QNQ9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 7.6e-09
Identity = 49/195 (25.13%), Postives = 81/195 (41.54%), Query Frame = 0
Query: 29 SAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCFVLVDSLSTLDL 88
S G S +RWW +WS IP K+K F+W+AFH + L + D
Sbjct: 877 SPGPSNPATYKRWWTTVWSSNIPPKIKHFVWKAFH-------HILPSSLNLFNRQEYRDA 936
Query: 89 LPRIGVSDPRQF-----IRLPRHGCGMFVDASCSAFRGVTRLGVVIVDEHGSIVGATTKS 148
RI S + +P + VDA+ S G ++ D G+++ + T
Sbjct: 937 QDRISTSSHTSHHLSPPVPVPDDTYRLSVDAALSPSTNQHGYGALVTDSKGTVIASLTAP 996
Query: 149 ASGLYAPLLAEMSAIKKGVRFASC----FWGVFSNCHNAVRLLCGLSDSIAEVGVFVADI 208
+ AP+ AE A+ + + + + S+C + V + S + + +A I
Sbjct: 997 SHTALAPIFAEAEALHRALLWCQAVHFPIAVITSDCQSLVHRIHNFSPDRSALSGLLALI 1056
Query: 209 KAMLSAFRGMEFHYI 215
+ LS+F G HYI
Sbjct: 1057 VSSLSSFPGAVLHYI 1064
BLAST of PI0026311 vs. ExPASy TrEMBL
Match:
A0A803PY89 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 9.9e-09
Identity = 51/202 (25.25%), Postives = 90/202 (44.55%), Query Frame = 0
Query: 18 SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCF 77
SGY++ H CS ++ WWK +W K+ K+K FIWR F+ + + EL
Sbjct: 139 SGYKLRFTHLDIVECSNKSTLKAWWKFVWGSKLTPKMKNFIWRVFN---QWLPTKVELTK 198
Query: 78 VLVDSLSTLDLLPRIGVSDPRQFIRLPRHGCGMFVDASCSAFRGVTRLGVVIVDEHGSIV 137
++ S D+ P+ P P + +DAS + L +I D +G ++
Sbjct: 199 QVMQSRPEQDVRPKRSWQPP------PPDHVLINIDASVVQDKPGCGLSAIIRDHNGQLI 258
Query: 138 GATTKSASGLYAPLLAEMSAIKKGVRFASCFWG-----VFSNCHNAVRLLCGLSDSIAEV 197
A + G+ + LAE AI+ G+ A W V ++C V L S+++
Sbjct: 259 VAESLFIPGMLSIQLAEAYAIRMGLLLAQ-KWSLKKVHVSADCLGVVSALQASPTSLSDW 318
Query: 198 GVFVADIKAMLSAFRGMEFHYI 215
G+ + +I + F ++F ++
Sbjct: 319 GMIIQEILMLQKHFTFVQFSFV 330
BLAST of PI0026311 vs. ExPASy TrEMBL
Match:
A0A803QHJ7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 6.4e-08
Identity = 57/246 (23.17%), Postives = 94/246 (38.21%), Query Frame = 0
Query: 18 SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFH-------------- 77
SGYR+ E K S+ +WW++LW LKIP K+K F+W+ H
Sbjct: 456 SGYRMACELKAERQQSDDHLAVQWWRKLWRLKIPQKIKVFVWKLAHGWLPTSTVLAKRHV 515
Query: 78 ----------PVGKGI------------------------------GDLAELCFVLVDSL 137
P I ++ E C+ L+
Sbjct: 516 STTGGCSRCSPHNSEIIFHAFWECKKSKSLWNTRNACIHGGFVPQPAEMVEWCYKLLGDF 575
Query: 138 STLDLLPRIGVSDPRQFIRLPRHG-CGMFVDASCSAFRGVTRLGVVIVDEHGSIVGATTK 197
P+ + ++PRHG + VD G + LG VI E G ++ A++
Sbjct: 576 QGGGCRPQEAMRREEGVWKVPRHGEVKINVDTGVKKGAGYSGLGCVIRGEQGDVLFASST 635
Query: 198 SASGLYAPLLAEMSAIKKGVRFA----SCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVAD 205
+ Y+PL E+ AI KG++ + + S+C A++L+ D +V +
Sbjct: 636 AIPREYSPLQLELMAILKGIQAGLQRHIMHFSIESDCLEAIQLIQKKEDGCRDVDCLLEQ 695
BLAST of PI0026311 vs. NCBI nr
Match:
KAA0067681.1 (UMP-CMP kinase isoform X1 [Cucumis melo var. makuwa] >TYK23685.1 UMP-CMP kinase isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 89.0 bits (219), Expect = 5.6e-14
Identity = 70/221 (31.67%), Postives = 92/221 (41.63%), Query Frame = 0
Query: 18 SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPV------------ 77
SGYR+FM H + GCS+ + WW +LW L IP K+K +WRAFH +
Sbjct: 81 SGYRLFMFHHNMIGCSDSSVTKHWWIRLWKLNIPAKIKILMWRAFHMILPVLTCLVDRRM 140
Query: 78 ---------GKG-------------------------------IGDLAELCFVLVDSLST 137
GK D ++ C VL DSLS
Sbjct: 141 DISPLCPYCGKHPETITQVVFGCRLAKELWKCFLPVVLSGRNYYFDFSDFCVVLADSLSP 200
Query: 138 LDL----LPRIGVSDPRQFIRLPRHGCGMF--VDASC----SAFRG----------VTRL 167
LD + G+ D R+ CG+ VDA C S RG + +
Sbjct: 201 LDFSLWCIGCWGLWDDHNDFRV----CGVVLDVDAKCWWLSSYVRGNGSTSSPGWNIWGV 260
BLAST of PI0026311 vs. NCBI nr
Match:
XP_030500352.1 (uncharacterized protein LOC115715819 [Cannabis sativa])
HSP 1 Score: 65.9 bits (159), Expect = 5.0e-07
Identity = 58/205 (28.29%), Postives = 86/205 (41.95%), Query Frame = 0
Query: 41 WWKQLWSLKIPNKVKKFIWRAFH---PVG------KGIGDLAELCFVLVDSL-------- 100
WW LWSL +P K+K FIWRAF+ PV K I D F L SL
Sbjct: 402 WWNFLWSLSLPQKIKIFIWRAFNDALPVATALVKRKIITDSTCSLFHLSTSLGNCWCSSS 461
Query: 101 ---------STLDLLPRIGVSDPRQFIRLPRHG-CGMFVDASCSAFRGVTRLGVVIVDEH 160
+T LP+I + P P G M VDA+ + R +T +G +I +
Sbjct: 462 APDPNSLAAATTASLPQISPAAPLMPWTPPPLGMLKMNVDAAVDSTRKITGIGALIRSSN 521
Query: 161 GSIVGATTKSASGLYA----PLLAEMSAIKKGVRFASCFWGVFSNCHNAVRLLCGLSDSI 215
G +V A +K G YA +A + ++ V ++ LC S +I
Sbjct: 522 GEVVAAISKPILGCYASHEMEAIAMFHCLNWAIQLQLLVSLVETDALRVSNALCKYSSAI 581
BLAST of PI0026311 vs. NCBI nr
Match:
KAA0052791.1 (14-3-3-like protein GF14 kappa [Cucumis melo var. makuwa])
HSP 1 Score: 62.0 bits (149), Expect = 7.3e-06
Identity = 45/104 (43.27%), Postives = 52/104 (50.00%), Query Frame = 0
Query: 107 GCGMFVD----ASC----SAFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAI 166
G G FV+ A C SA RGV LGVV+VDEHGSI+GAT+
Sbjct: 96 GLGSFVEVVVVAFCGHVLSAARGVNGLGVVVVDEHGSILGATSNCD-------------- 155
Query: 167 KKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAM 203
++C LLCG SDSIAEVGV V+DIKAM
Sbjct: 156 --------------NDCLTVSGLLCGNSDSIAEVGVLVSDIKAM 171
BLAST of PI0026311 vs. NCBI nr
Match:
XP_030508875.1 (uncharacterized protein LOC115723521 [Cannabis sativa])
HSP 1 Score: 61.6 bits (148), Expect = 9.5e-06
Identity = 54/193 (27.98%), Postives = 78/193 (40.41%), Query Frame = 0
Query: 41 WWKQLWSLKIPNKVKKFIWRAFHPV---------------------GKGIGDLAELCFVL 100
WWK LW+LKIP K+K F W+AF+ + G GI +L
Sbjct: 454 WWKFLWTLKIPPKIKHFTWKAFNHLLPCALNLFHKHAIPSACCSHCGGGIESGLSEAQIL 513
Query: 101 VDSLSTLDLLPRIGVSDPRQFIRLPRHGCGMFVDASCSAFRGVTRLGVVIVDEHGSIVGA 160
L L P S L +FVDA+ S T LG+V V I
Sbjct: 514 STCLLPLKPFPAASGS------VLTPSTTALFVDAALSQNASATGLGLVFVQGVSHIHQF 573
Query: 161 TTKSASGLYAPLLAEMSAIKKGVRFASCFWG------VFSNCHNAVRLLCGLSDSIAEVG 207
+ + SG +P+ AE A+ +G+++ C +FS+C N V + G + +
Sbjct: 574 ASINKSGASSPIFAEAQALAEGIQW--CLSSNLKPDYIFSDCLNLVSKVKGNWHDHSPLS 633
BLAST of PI0026311 vs. NCBI nr
Match:
XP_030509336.1 (uncharacterized protein LOC115724021 [Cannabis sativa])
HSP 1 Score: 58.9 bits (141), Expect = 6.2e-05
Identity = 52/220 (23.64%), Postives = 90/220 (40.91%), Query Frame = 0
Query: 18 SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFH---PVGKGIGDLAE 77
SGY + + + S + WWK W+L++P+KVK F+W+AFH P+
Sbjct: 759 SGYHLANDLEDSDLSNSSNNQHTWWKYFWNLQLPSKVKIFVWKAFHCAIPIALPAVSARS 818
Query: 78 L------------------CFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHGCGMFVDASC 137
L CF + + G+S + + + + C ++
Sbjct: 819 LILQHVAFVRMPGNRLNMPCFYANMLKRNNFIHGKPGLSPTQLWAKSVAYFCNFQQQSTS 878
Query: 138 SA--------FRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFAS-C 197
S FR +G++I + G +V A +K +G P E A+ G+ +A+ C
Sbjct: 879 SKSIRDSTGYFRNKIGVGIIIRNSSGQVVAAYSKPLTGRLKPQEMEAKALLMGINWAARC 938
Query: 198 FWGV---FSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLS 205
+ S+ V + +S++I+ G V DIK LS
Sbjct: 939 NLSINLFESDSLILVNSINSISNAISSFGDLVLDIKNRLS 978
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VQ24 | 2.7e-14 | 31.67 | Adenylate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G005... | [more] |
A0A803NLN2 | 3.4e-09 | 25.87 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QNQ9 | 7.6e-09 | 25.13 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PY89 | 9.9e-09 | 25.25 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QHJ7 | 6.4e-08 | 23.17 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAA0067681.1 | 5.6e-14 | 31.67 | UMP-CMP kinase isoform X1 [Cucumis melo var. makuwa] >TYK23685.1 UMP-CMP kinase ... | [more] |
XP_030500352.1 | 5.0e-07 | 28.29 | uncharacterized protein LOC115715819 [Cannabis sativa] | [more] |
KAA0052791.1 | 7.3e-06 | 43.27 | 14-3-3-like protein GF14 kappa [Cucumis melo var. makuwa] | [more] |
XP_030508875.1 | 9.5e-06 | 27.98 | uncharacterized protein LOC115723521 [Cannabis sativa] | [more] |
XP_030509336.1 | 6.2e-05 | 23.64 | uncharacterized protein LOC115724021 [Cannabis sativa] | [more] |
Match Name | E-value | Identity | Description | |