PI0026061 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGGGTACATCAAAAGGTAGGAAGATAGATGGCTCGAGAGAGTTATGGTACTGGAAATTATCCTTAAAAAAAAGGTACTGGAAAATTTTCGGACAAAAAGGTCGCTGGGAAAATTGAGGTTTTTTTTTATTATATATATTTTTTTCGGTGGATGTGTCGAATTAAATCTAATGTAGAAAAAACACGATGGGCATGTGGTTGTTTTTCGAAATGTTTGGTCAATTGTAAGAAGAAATGAAGGCGAATTGAAGCCATTACCTTAATTCCAACGCAAATATCTTCTTCTTCTTCTTCCATCCTTCAGTCAATCACAAGCAGCTCTGCTCCACTAGCATAATCAGAAATTAACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCGAGCGTTCTGGTATGCCCATTTCTTTCACTCTTCAATTGCTTTCGCTCTTTTCTATTATTTGCTTCTTATATCTCCTCCGATGTTATCGATTTTCTTCTTTGATTCTATTGAAGTTTGGAGAAATGGGGAAATTAAAGGGGCGGAATCATCATTCCATTTTGTCATCCAAGAAACCTATGCGCAGTAGCTTTCTTCGTCTCGGCTCCAACAATTCTACAAATGGCATCTCCGCATTTTTCTTCAATCCAATTGAGGATCCTGTTATCAAAGAAGCTCTCAAGGTATCCCATTAACTCGTACATCAAAAACCCTTCCTGGGTTTTGGCTGTTGTGTTCATTCGCTTAGTTTCTTCCTGGATTAAGGTCTTGATTTCTAAGTATGTTCAAAATAGGAAGGATTCAATTAATTTCCCATTCTATTCCCATAGCACTTAAAAGACTGATTATCTTCAAGTAGAGTTACAATTTTGGTCTACAAGTGCGAGTTAGGATAGATGGATGCATGAATCTAAATTTGTTCTAGTCATGTCGTGTCATGTTGAAAGTATTAGAACTATGTCGGACCGTTAGTATAAGAAACTCAAGTATCATTCTATCTCTCTGATGACTACCACTGCATAATATAAGTATTGTTGAGTCAGCTTTTTTTATCTGCCAATAACAACCTCGAACTAACTTCAAAGGAGAAAATTATATGCCTTTATGATCTGGAAGGTTATTTGTTAGAAAATTGCATAAAGATGTTTATAATTTGTAAACTTTAAGCAATAGAGAACTTCGCCGGGGAGTAGTGCACACTTTAATGGAAATTTTGGCAATTTAGTATCTTCTCAACTAGAGGATATCTTTAATTGGCTTCACTTTCACAAATCCTTTAAACCATGTTCTTCACATTTATGAATCTATATTGGTTATCTTATAGTAGAACCAAAATCCTAGAGGAAGAAGTTAATAAGACAGTTGTTGTATTGGTTTCTTTGTTTCCTGCTACCTCAGTGACAGAGCATTCACAGATTAATCTAAAAGGTGTACGCCACTCTAGCTACTTATCTCCGAGAAAAAACCTCCTCTTATAAAGTTCTACTTGATTCATAGTTTCATACCATACAAAAGACTGAAACTAAATTCATTTTACCGTACCCGGCTCCTGCTCAGATTTTCCCCTCCAATTGTGCCGCTACACTACTTGGTAGTTATTCAAATTCTTTCCATCAATGAAATCTAAGTAGGAAATGTTCCAATGGATGCCCTCAAGATTGATGAGCCCTGTTCTGGCTGAAAGAATCCAGTATTGGTGCTTCAACACATTTAGTTCGCTGATTCTTGCCTTGTTATTTAGTAAGATCAAAAGTTGCTAGAAAGCTTACTATATTAACATCTCATCTCTAAGGCTCGTCGTTGCCACCATGTTGCACTCACTTTCGCACTCTGATGTTTTTTAACTAACTATTTGGCACCAGGTTCAGTTGTGAGATACTAGACGTATTTGGATTGATTTTTTAAGTACTTAAACAATGCAAACAAGTCCAAGGTTGTTTTCCAAAATTCTTACTGCTATGGAGACTGCTGATGCGAAAAGTAAACATCGTTTCATTATATCCAGTACATTTCCATAGAATTGAATCAGTCCCAATCACTTGTTGAGACTGAATGTTTGAGTGTTTATTGGTTTTTCATCATTTATAACTAAATAGGCAATCCCAGTTCAAACTCTTACCGATGCATTAGGATTCTTTTTTGGTATGGTTCCTTCTGAACTATATAGAATTAGATGTTGAGGCTTCAATAGCTGGGAGGTATGAATTTTTAAGATGAAAACACTCACTTTACCAACTCCAATTTTTCCATGTCTTCTGTGTTCATAATCAAACATATCATGTGAAAGTAAAGTAATTTGAATTGTTGTAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCTGGACTTTTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGATCCCATCAATGGATTTAACCTGGTATAGACAACCTTATTTATTCCAATAATACAAACTGGAAAAGTGGGAATGAAATGATATTTGATTAGTATTACTACAGCTCCCTTGATTTCCCTTCTACCTTCTTTTTTTTTCCTTGATTTAGGAGGAAACACTTTATTGGTGTTTTGAATTAATTAGTTGTTCCAAGTTTAATTAATATATATATATATATATTTTTAT ATTTGGGTACATCAAAAGGTAGGAAGATAGATGGCTCGAGAGAGTTATGGTACTGGAAATTATCCTTAAAAAAAAGGTACTGGAAAATTTTCGGACAAAAAGGTCGCTGGGAAAATTGAGGTTTTTTTTTATTATATATATTTTTTTCGGTGGATGTGTCGAATTAAATCTAATGTAGAAAAAACACGATGGGCATGTGGTTGTTTTTCGAAATGTTTGGTCAATTGTAAGAAGAAATGAAGGCGAATTGAAGCCATTACCTTAATTCCAACGCAAATATCTTCTTCTTCTTCTTCCATCCTTCAGTCAATCACAAGCAGCTCTGCTCCACTAGCATAATCAGAAATTAACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCGAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGGCGGAATCATCATTCCATTTTGTCATCCAAGAAACCTATGCGCAGTAGCTTTCTTCGTCTCGGCTCCAACAATTCTACAAATGGCATCTCCGCATTTTTCTTCAATCCAATTGAGGATCCTGTTATCAAAGAAGCTCTCAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCTGGACTTTTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGATCCCATCAATGGATTTAACCTGGTATAGACAACCTTATTTATTCCAATAATACAAACTGGAAAAGTGGGAATGAAATGATATTTGATTAGTATTACTACAGCTCCCTTGATTTCCCTTCTACCTTCTTTTTTTTTCCTTGATTTAGGAGGAAACACTTTATTGGTGTTTTGAATTAATTAGTTGTTCCAAGTTTAATTAATATATATATATATATATTTTTAT ATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCGAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGGCGGAATCATCATTCCATTTTGTCATCCAAGAAACCTATGCGCAGTAGCTTTCTTCGTCTCGGCTCCAACAATTCTACAAATGGCATCTCCGCATTTTTCTTCAATCCAATTGAGGATCCTGTTATCAAAGAAGCTCTCAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCTGGACTTTTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGA MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQEDGPTEIEIE Homology
BLAST of PI0026061 vs. ExPASy Swiss-Prot
Match: Q9FZ89 (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g28150 PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 6.0e-19 Identity = 47/74 (63.51%), Postives = 60/74 (81.08%), Query Frame = 0
BLAST of PI0026061 vs. ExPASy Swiss-Prot
Match: P74786 (UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ssl0294 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06 Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of PI0026061 vs. ExPASy Swiss-Prot
Match: Q8YQ06 (UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=asl4034 PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 7.1e-04 Identity = 21/65 (32.31%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of PI0026061 vs. ExPASy TrEMBL
Match: A0A5D3BGH6 (UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00680 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 5.1e-61 Identity = 124/128 (96.88%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of PI0026061 vs. ExPASy TrEMBL
Match: A0A1S3AZP7 (UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 5.1e-61 Identity = 124/128 (96.88%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of PI0026061 vs. ExPASy TrEMBL
Match: A0A0A0LT92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.7e-59 Identity = 121/128 (94.53%), Postives = 125/128 (97.66%), Query Frame = 0
BLAST of PI0026061 vs. ExPASy TrEMBL
Match: A0A6J1E8W6 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431718 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.1e-51 Identity = 108/128 (84.38%), Postives = 115/128 (89.84%), Query Frame = 0
BLAST of PI0026061 vs. ExPASy TrEMBL
Match: A0A6J1KGM3 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495083 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 4.0e-50 Identity = 106/128 (82.81%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of PI0026061 vs. NCBI nr
Match: XP_008439829.1 (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo] >KAA0036065.1 UPF0426 protein [Cucumis melo var. makuwa] >TYJ98872.1 UPF0426 protein [Cucumis melo var. makuwa]) HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60 Identity = 124/128 (96.88%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of PI0026061 vs. NCBI nr
Match: XP_004137400.1 (UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]) HSP 1 Score: 236.9 bits (603), Expect = 9.8e-59 Identity = 121/128 (94.53%), Postives = 125/128 (97.66%), Query Frame = 0
BLAST of PI0026061 vs. NCBI nr
Match: XP_038893812.1 (UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]) HSP 1 Score: 230.3 bits (586), Expect = 9.1e-57 Identity = 116/128 (90.62%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of PI0026061 vs. NCBI nr
Match: KGN63981.2 (hypothetical protein Csa_013804 [Cucumis sativus]) HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52 Identity = 110/117 (94.02%), Postives = 114/117 (97.44%), Query Frame = 0
BLAST of PI0026061 vs. NCBI nr
Match: XP_022924196.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]) HSP 1 Score: 211.5 bits (537), Expect = 4.4e-51 Identity = 108/128 (84.38%), Postives = 115/128 (89.84%), Query Frame = 0
BLAST of PI0026061 vs. TAIR 10
Match: AT1G28150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 96 Blast hits to 96 proteins in 44 species: Archae - 0; Bacteria - 56; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 95.1 bits (235), Expect = 4.3e-20 Identity = 47/74 (63.51%), Postives = 60/74 (81.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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