PI0025873 (gene) Melon (PI 482460) v1

Overview
NamePI0025873
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 1020762 .. 1023487 (+)
RNA-Seq ExpressionPI0025873
SyntenyPI0025873
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTCAACCTCGTTGCGGGCCGAGCCAGCTGTTGAAACAGTCTTGACGCGCCACAGGCCACTGGTTTCATCGTACCTTGCTGACTGAACACACTCATTGAATTGTGGGTTGATCTCAAAATGCTTGGCGTATGATTCAAGGTACTCAATGAACTGTCTCTTGGTTGGGTATTCAGGGAAGTCTTCTGGGAATGGGAGTTTTGGGAGCTGGCAGAATTGCTTTGGAAGGTGAAGTTTAAGTCTGTCATATGTGCGCTTTTGCCACAGGGAGGCTATGCATTCAGCTCGTTCAAGGACTACAAAAGGCACCCCTTGTTCTCTAAGACAAGCAGCTGTAGCCAGCCCTGATGGCCCGGCCCCAACGATCACTGGACCGTTAACCCAGATGCAACGTCGAGAGAAGAAGTCATCATGATCGGCAAGACGAAACAAGTTCTCCATCACTACTGAGGTAACTCAAAGACTTTGTTTTGTTTGATTGAAAACTGTGGTTGTGTTTGTGTTCTTCAGGATGGATGCCAATAGGAAACAGGTAGACGTTTGGAAGTGTTTTTGTTTGTAAGAGAAGATTGTAAGTAAAGTTTGAAGGCTTTGGGAATTGGAGAGGAGAATTCTGATTTTTGGAGAGGATGAGAATGAAGGGAGGATGGAGGGGGCTTAAATAAGGAGAATTGGATGGCACTAAAGGAAGAAAGAGAAAGAGGTTGAGAGAGAGATGCATGTGATGGAAGTGGGAGTCAATGAGCTTTGAAGGGTCATTCTCAAATCATAAGCTTCTGCCTACCCCTTGATTATTTTATTTCCTTATTCCCTCTTCCCCTTCTCAATATAATATTAGATCTCACTAATACATTAGTTCATACTCTTCATTAAGAATTTAATGTTGAAAGCCTCCCATCATAAACTATATATTTAATCTTAATCATTATTTTATCTATCATAGGTAAATTTTCTTCCACACATGGAGAGAGTGTTAAATCTCTATAGATATATGGTTCAATTTTTTACCCTGCAATTGTTCAACTAAAAACAAACTTAGACAAGAAGGTGGGCAATCCAATCCCGAGTTAAATCGGGCTGGGTTTGTAGTGACAGTAAATGGATCAGATCAAGTGTGTGAGAGAGAATAAGGGAGGAATGAAAGGGAGAGATGGAGTTTTCAAAGAAAGTTGAATCAGGTGAGCCCCCAGCAGAGAGATTTAATGGCAATGATGAAGAGATAAATGGGGGGAGGGGGTATAATGCTGACTGGGACATGTAGAAAAGATCCCACGTGGAGGGAGGAAGAGGAGGGCATGGGGTGAGGGGGCCACACGTCAGCATCTTTGGACCTCAAAAAAAACCAAGCTGCAAAGGGAATTTGAAATTTTTGTTTGAGTTGAAAGGCTGTTTTGTTTTATGGCTCACACCACCCATCTTGCCAACTGGTACACTTCAATATCTATGCTGATAAAACATTAACTCTATATTTTTATGTTTTTTTTTTCTATTTTAATATGACATGGATTTTTCCTTTTTTTTTTTTTTTGGCTCTGGAAAAGTCACTAATGACTAAACTTCTTCCTAGGCTCTATATTTCGGAGAAAATTATGTTATTTGTTTTTTTTTTTTTTAGTTTTAGAGTGTAATGATCAGCAGTGATTTTGAGGTTAAGTTTTAGAAAGTGTATTAAAGTGAAACACTCATCTCTAGACACTTTTGAAAAAAGTTCTAGTTACACGTGGACAAATTAACATCTTTCAATTCAAAACAAATGTGATTTATATATCTCTTTGTACTTATGTTTTTTAGGTCAACAATCGCAAGAATGAGGATCAAGATATCGACTTTTGAAAAGGTAATTAATGTCTTATCGACTGAACTATACTTAGATTGATGTTATCATCCATGTGAGTTACATTGAATGGATACACATCTCTTAAAGCATGAGAACTAAACATCATTACATCGAAACCTAAAAGATTAAGCTTCTTTTTTCCTCTTCTTTTTATGTACATGCTAAGTGGCCACAAGTGTTTGGTTGTATGTAAATCTTAAAAAGAAGAAGAGACATAGAATGAATCTAAAGGTACATTTAGGTAATAATGAAGTAGATTTAGACGGTGAAAGATATGATATGAAAGTGTAAAAAGAAGGGTTATGTGGCCATTGGCACTAATATTATATATATTTATTGAAATTACAATCTCAACTCCTTTTCATGAAAAGTGAGATTTGGAGCCTATTATATATGGGGTTTGGCATTTTCTTTTCTCTTTTAGAAACTCATATATAAATATAAATGAGTAGTAGTATTCTATCATCATTCCCAACTTAATTGCTCCTCTCACTCTCATTATCAAACCCTCAACTTTACATACCTAACACCAACAAAAATTATGCAACATTACATAATATGATAGAGAGAGAATCAATTATGTGTTCATATAAAAATAAAATCATTAGCTATTTTAGTCAAAATTAAGTAGGACATTCCTATGGTAGGATGATATCATTTTTGTGGATGTTCATAGTTAAAATTGACATACCTCAATTTAAATATCTTGCTAAAAATATATATATAACTAGCTATTTAAACTCACAATCTATTAGAAAAAGGTAGCCAATTTACCTTACATTATATATTTTGGTGTTTGAACTATTTAAACCCATTGTTTTTAATAAACAGATGAGATTGCTTGGAGCTTATGTATTAACAACAACCTTGAGAACGTATTGGAGTAA

mRNA sequence

ATGTATTCAACCTCGTTGCGGGCCGAGCCAGCTGTTGAAACAGTCTTGACGCGCCACAGGCCACTGGTACTCAATGAACTGTCTCTTGGTTGGGTATTCAGGGAAGTCTTCTGGGAATGGGAGTTTTGGGAGCTGGCAGAATTGCTTTGGAAGGTGAAGTTTAAGTCTGTCATATGTGCGCTTTTGCCACAGGGAGGCTATGCATTCAGCTCGTTCAAGGACTACAAAAGATGCAACGTCGAGAGAAGAAGTCATCATGATCGGCAAGACGAAACAAGTTCTCCATCACTACTGAGGTCAACAATCGCAAGAATGAGGATCAAGATATCGACTTTTGAAAAGATTGCTTGGAGCTTATGTATTAACAACAACCTTGAGAACGTATTGGAGTAA

Coding sequence (CDS)

ATGTATTCAACCTCGTTGCGGGCCGAGCCAGCTGTTGAAACAGTCTTGACGCGCCACAGGCCACTGGTACTCAATGAACTGTCTCTTGGTTGGGTATTCAGGGAAGTCTTCTGGGAATGGGAGTTTTGGGAGCTGGCAGAATTGCTTTGGAAGGTGAAGTTTAAGTCTGTCATATGTGCGCTTTTGCCACAGGGAGGCTATGCATTCAGCTCGTTCAAGGACTACAAAAGATGCAACGTCGAGAGAAGAAGTCATCATGATCGGCAAGACGAAACAAGTTCTCCATCACTACTGAGGTCAACAATCGCAAGAATGAGGATCAAGATATCGACTTTTGAAAAGATTGCTTGGAGCTTATGTATTAACAACAACCTTGAGAACGTATTGGAGTAA

Protein sequence

MYSTSLRAEPAVETVLTRHRPLVLNELSLGWVFREVFWEWEFWELAELLWKVKFKSVICALLPQGGYAFSSFKDYKRCNVERRSHHDRQDETSSPSLLRSTIARMRIKISTFEKIAWSLCINNNLENVLE
Homology
[Close]
BLAST of PI0025873 vs. ExPASy TrEMBL
Match: A0A0A0K9B0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087880 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.5e-64
Identity = 125/132 (94.70%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 1   MYSTSLRAEPAVETVLTRHRPLVLNELSLGWVFREVFWEWEFWELAELLWKVKFKSVICA 60
           MYSTSLRAEPAVETVLTRHRPLVLNELSLGWVFREVFWEWEFWELAELLWKVKFKSVI A
Sbjct: 1   MYSTSLRAEPAVETVLTRHRPLVLNELSLGWVFREVFWEWEFWELAELLWKVKFKSVIGA 60

Query: 61  LLPQGGYAFSSFKDYKRCNVERRSHHDRQDETSSPSLLRSTIARMRIKISTFEK--IAWS 120
           LLPQGGYAFSSFKDYKRCNVERRSHHDRQDETSSPSLLRSTIARM+IKISTFEK  + W 
Sbjct: 61  LLPQGGYAFSSFKDYKRCNVERRSHHDRQDETSSPSLLRSTIARMKIKISTFEKMRLPWR 120

Query: 121 LCINNNLENVLE 131
           LCINNNLENVLE
Sbjct: 121 LCINNNLENVLE 132

[Close]
BLAST of PI0025873 vs. ExPASy TrEMBL
Match: A0A2P5AHW0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_330890 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-04
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0 

Query: 23  VLNELSLGWVFREVFWEWEFWELAELLWKVKFKSVICALLPQGGYAFSSFKDYK 77
           V +EL L  +F EVF +WE  ELAEL  +VKF++V+ +LLP+ G A  SF+DY+
Sbjct: 78  VFDELVLCRIFGEVFGKWEVGELAELFREVKFETVVGSLLPKRGNAVCSFEDYE 131

[Close]
BLAST of PI0025873 vs. NCBI nr
Match: PON36104.1 (hypothetical protein PanWU01x14_330890 [Parasponia andersonii])

HSP 1 Score: 54.7 bits (130), Expect = 7.0e-04
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0 

Query: 23  VLNELSLGWVFREVFWEWEFWELAELLWKVKFKSVICALLPQGGYAFSSFKDYK 77
           V +EL L  +F EVF +WE  ELAEL  +VKF++V+ +LLP+ G A  SF+DY+
Sbjct: 78  VFDELVLCRIFGEVFGKWEVGELAELFREVKFETVVGSLLPKRGNAVCSFEDYE 131

The following BLAST results are available for this feature:
BLAST of PI0025873 vs.
Match NameE-valueIdentityDescription
BLAST of PI0025873 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9B08.5e-6494.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087880 PE=4 SV=1[more]
A0A2P5AHW03.4e-0451.85Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_330890 PE... [more]
BLAST of PI0025873 vs. NCBI nr
Match NameE-valueIdentityDescription
PON36104.17.0e-0451.85hypothetical protein PanWU01x14_330890 [Parasponia andersonii][more]
BLAST of PI0025873 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025873.1PI0025873.1mRNA