PI0025053 (gene) Melon (PI 482460) v1

Overview
NamePI0025053
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionGag/pol protein
Locationchr04: 22160683 .. 22162575 (+)
RNA-Seq ExpressionPI0025053
SyntenyPI0025053
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGATCTTCAAGTCAAGATAAGATTAGAGTACGTTCTGATGGACCTGAATCAGAACGTCCCACATCGCGGGGAAGTGGCGAACACAAAACGCCACAATACATCCACCTGAAGCACGGCAAGGGGAAGGTTTTACTGAAACCTCCGTCGGAAGCAGCTGACAATTTCTTGGAAGTTGAAGTTGATAATCAGGATACAGAGGCGGTGCTCGAATTTCTTAATGAACGAGCAAAGAAGAGGAAGGAAGCCCACATCAAAAGGACTAAGGAAGCTCGTCGCCGAAAGGACGAGCGTGAGCGAACGAAAGTTGACACAATTCGAAAGGCGAAGAGCACACTAGAAATACGCTCACCGCCTAACGAGGTTGCAGAGCTTCACAAGAAGATCTCTGACAAGCTCGCACAAGTCTCATTCACTAAAACGAGGAAAACAATCGAGGCAGTTAAGGTTGCCTTAAAAAGGAGAGAGGAAAAGAAAAAGATGTTCGCAGAATTAAGCGAACAAGTGGCGGAGCTCCCCGCGAAAGTAAGAGCATTGGAGCCGGAAAGAAACCTCGACACAATCGCAGAAGAATTCGAGGAAGAGCTGGAGGCGATGAGCCCACTTGATGACGGGCCATCGCCAAGAAAATCAAGGGAGGTCGCAGGACCATCAAGAGGAAGAAAGAAACTTGGACGTTCTGGACCTGAAGAACACCTATCAGGCGGCGACACCATAAGCAAGACACCCTCTATCAACTCTCTCATCAAAGTTGAAAAGGGGTTGTTTCCGTTCAATGGTCAACTTCCTGACTTCCTCTACGCGCCAATTCAGGCGTTCGGATGGAAGTCATTTTTCAAAGGGCACACCAAGATACGATTAGGAGTGGTAGAAAAATTTTATGCGGCTAAACTCAACGCTGAAGAGTTTAGCGTACAAATAAGTGGAAAGACAGTGAGTTTCAACACGGAGGCCATCAATGCGTTGTATGATTTGCCCAACAACGTTGAAACCCCAGGGCAATTATACGTAGATAATCCTACGAAGAGGATGGCCCGTGAAGCGTTGGAAGCCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGTGTGTGGTTGTTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTCAGCGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCGTCAACCGTTGAGACCCTTTGCCTTAAAGCTGTGCCATTCTTATCTGTCATCCAAACCATCTCAATACCTGGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATCAGGCGACACGCCTGAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCAGTCATCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGTGACGAAGCAACTTCCTCTGAAATTTCCCCACTCCTCATCTCGCCCAATACAGCGAGCTCCACCATCAGTCCAAAATTCCAACAACTCCAATCCTCCCCGCTCTTCTTCGCCCATTCCAATCACCCCATCATTCCCAACTATCTCTCCCCACCATTCACCTCTCCCCCACATTCGTTCCCCACCAACATCCCTCACCTTTCCCCACGACCGCCTACACCTCCACCCACAAAATCCACTTCCCCCCTTCACTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTTTTCTTCTTTCGCCCATCATGGACCTGA

mRNA sequence

ATGGCCGGATCTTCAAGTCAAGATAAGATTAGAGTACGTTCTGATGGACCTGAATCAGAACGTCCCACATCGCGGGGAAGTGGCGAACACAAAACGCCACAATACATCCACCTGAAGCACGGCAAGGGGAAGGTTTTACTGAAACCTCCGTCGGAAGCAGCTGACAATTTCTTGGAAGTTGAAGTTGATAATCAGGATACAGAGGCGGTGCTCGAATTTCTTAATGAACGAGCAAAGAAGAGGAAGGAAGCCCACATCAAAAGGACTAAGGAAGCTCGTCGCCGAAAGGACGAGCGTGAGCGAACGAAAGTTGACACAATTCGAAAGGCGAAGAGCACACTAGAAATACGCTCACCGCCTAACGAGGTTGCAGAGCTTCACAAGAAGATCTCTGACAAGCTCGCACAAGTCTCATTCACTAAAACGAGGAAAACAATCGAGGCAGTTAAGGTTGCCTTAAAAAGGAGAGAGGAAAAGAAAAAGATGTTCGCAGAATTAAGCGAACAAGTGGCGGAGCTCCCCGCGAAAGTAAGAGCATTGGAGCCGGAAAGAAACCTCGACACAATCGCAGAAGAATTCGAGGAAGAGCTGGAGGCGATGAGCCCACTTGATGACGGGCCATCGCCAAGAAAATCAAGGGAGGTCGCAGGACCATCAAGAGGAAGAAAGAAACTTGGACGTTCTGGACCTGAAGAACACCTATCAGGCGGCGACACCATAAGCAAGACACCCTCTATCAACTCTCTCATCAAAGTTGAAAAGGGGTTGTTTCCGTTCAATGGTCAACTTCCTGACTTCCTCTACGCGCCAATTCAGGCGTTCGGATGGAAGTCATTTTTCAAAGGGCACACCAAGATACGATTAGGAGTGGTAGAAAAATTTTATGCGGCTAAACTCAACGCTGAAGAGTTTAGCGTACAAATAAGTGGAAAGACAGTGAGTTTCAACACGGAGGCCATCAATGCGTTGTATGATTTGCCCAACAACGTTGAAACCCCAGGGCAATTATACGTAGATAATCCTACGAAGAGGATGGCCCGTGAAGCGTTGGAAGCCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGTGTGTGGTTGTTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTCAGCGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCGTCAACCGTTGAGACCCTTTGCCTTAAAGCTGTGCCATTCTTATCTGTCATCCAAACCATCTCAATACCTGGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATCAGGCGACACGCCTGAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCAGTCATCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGTGACGAAGCAACTTCCTCTGAAATTTCCCCACTCCTCATCTCGCCCAATACAGCGAGCTCCACCATCAGTCCAAAATTCCAACAACTCCAATCCTCCCCGCTCTTCTTCGCCCATTCCAATCACCCCATCATTCCCAACTATCTCTCCCCACCATTCACCTCTCCCCCACATTCGTTCCCCACCAACATCCCTCACCTTTCCCCACGACCGCCTACACCTCCACCCACAAAATCCACTTCCCCCCTTCACTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTTTTCTTCTTTCGCCCATCATGGACCTGA

Coding sequence (CDS)

ATGGCCGGATCTTCAAGTCAAGATAAGATTAGAGTACGTTCTGATGGACCTGAATCAGAACGTCCCACATCGCGGGGAAGTGGCGAACACAAAACGCCACAATACATCCACCTGAAGCACGGCAAGGGGAAGGTTTTACTGAAACCTCCGTCGGAAGCAGCTGACAATTTCTTGGAAGTTGAAGTTGATAATCAGGATACAGAGGCGGTGCTCGAATTTCTTAATGAACGAGCAAAGAAGAGGAAGGAAGCCCACATCAAAAGGACTAAGGAAGCTCGTCGCCGAAAGGACGAGCGTGAGCGAACGAAAGTTGACACAATTCGAAAGGCGAAGAGCACACTAGAAATACGCTCACCGCCTAACGAGGTTGCAGAGCTTCACAAGAAGATCTCTGACAAGCTCGCACAAGTCTCATTCACTAAAACGAGGAAAACAATCGAGGCAGTTAAGGTTGCCTTAAAAAGGAGAGAGGAAAAGAAAAAGATGTTCGCAGAATTAAGCGAACAAGTGGCGGAGCTCCCCGCGAAAGTAAGAGCATTGGAGCCGGAAAGAAACCTCGACACAATCGCAGAAGAATTCGAGGAAGAGCTGGAGGCGATGAGCCCACTTGATGACGGGCCATCGCCAAGAAAATCAAGGGAGGTCGCAGGACCATCAAGAGGAAGAAAGAAACTTGGACGTTCTGGACCTGAAGAACACCTATCAGGCGGCGACACCATAAGCAAGACACCCTCTATCAACTCTCTCATCAAAGTTGAAAAGGGGTTGTTTCCGTTCAATGGTCAACTTCCTGACTTCCTCTACGCGCCAATTCAGGCGTTCGGATGGAAGTCATTTTTCAAAGGGCACACCAAGATACGATTAGGAGTGGTAGAAAAATTTTATGCGGCTAAACTCAACGCTGAAGAGTTTAGCGTACAAATAAGTGGAAAGACAGTGAGTTTCAACACGGAGGCCATCAATGCGTTGTATGATTTGCCCAACAACGTTGAAACCCCAGGGCAATTATACGTAGATAATCCTACGAAGAGGATGGCCCGTGAAGCGTTGGAAGCCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGTGTGTGGTTGTTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTCAGCGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCGTCAACCGTTGAGACCCTTTGCCTTAAAGCTGTGCCATTCTTATCTGTCATCCAAACCATCTCAATACCTGGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATCAGGCGACACGCCTGAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCAGTCATCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGTGACGAAGCAACTTCCTCTGAAATTTCCCCACTCCTCATCTCGCCCAATACAGCGAGCTCCACCATCAGTCCAAAATTCCAACAACTCCAATCCTCCCCGCTCTTCTTCGCCCATTCCAATCACCCCATCATTCCCAACTATCTCTCCCCACCATTCACCTCTCCCCCACATTCGTTCCCCACCAACATCCCTCACCTTTCCCCACGACCGCCTACACCTCCACCCACAAAATCCACTTCCCCCCTTCACTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTTTTCTTCTTTCGCCCATCATGGACCTGA

Protein sequence

MAGSSSQDKIRVRSDGPESERPTSRGSGEHKTPQYIHLKHGKGKVLLKPPSEAADNFLEVEVDNQDTEAVLEFLNERAKKRKEAHIKRTKEARRRKDERERTKVDTIRKAKSTLEIRSPPNEVAELHKKISDKLAQVSFTKTRKTIEAVKVALKRREEKKKMFAELSEQVAELPAKVRALEPERNLDTIAEEFEEELEAMSPLDDGPSPRKSREVAGPSRGRKKLGRSGPEEHLSGGDTISKTPSINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNTEAINALYDLPNNVETPGQLYVDNPTKRMAREALEAIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETLCLKAVPFLSVIQTISIPGGLCNQMALNRMITFHGHKEMERRAKTSGDTPEGMALAERKRKAPVIASTPPPKAKKTKVLVTKQLPLKFPHSSSRPIQRAPPSVQNSNNSNPPRSSSPIPITPSFPTISPHHSPLPHIRSPPTSLTFPHDRLHLHPQNPLPPFTPNHPHQGELNPFRLFFFRPSWT
Homology
BLAST of PI0025053 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.0e-45
Identity = 117/297 (39.39%), Postives = 163/297 (54.88%), Query Frame = 0

Query: 147 EAVKVALKRREEKKKMFAEL-----SEQVAELPAKVRALEPERNLDTIAEEFEEELEAMS 206
           E  KVA K +E+ +K+   L       Q  +  A+ +    E+  D  ++EFE+ELE +S
Sbjct: 13  EFYKVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFEKELEELS 72

Query: 207 PLDD---GPSPRKSREVAGPS----RGRKKLGRSGPEEHLSGGDTISKTPSINSLIKVEK 266
           PL+D      P+K R + G        + K  +   E   S  + +     +     +EK
Sbjct: 73  PLEDRVVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEELGKHFMIEK 132

Query: 267 GLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTVS 326
           G+FPF GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N E     + GK V+
Sbjct: 133 GIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYAIVKGKMVN 192

Query: 327 FNTEAINALYDL-PNNVETPGQLYVDNPTKRMAREALEAIAWPGAAWEVTPTGKYQLYPH 386
           F  + +N LY L    VE P       P+    + ALE +AWPG  W++TP  KYQL+PH
Sbjct: 193 FGPKVVNVLYGLRQTTVEYP---IFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPH 252

Query: 387 QLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWM 431
            L T ASVWL FIKK + PTRHD+TI+LE  MLLYCI+ +  +N+ E+I   I AW+
Sbjct: 253 NLKTTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

BLAST of PI0025053 vs. ExPASy TrEMBL
Match: A0A5A7V6M5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G00020 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.6e-41
Identity = 92/180 (51.11%), Postives = 119/180 (66.11%), Query Frame = 0

Query: 285 KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNTEAINALYDLPNNVETPGQLYVDNPTKR 344
           KIR+ VV KFY  K N  +  + I  +   FN E IN LY+ PN+ E  GQ  V   TK 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 345 MAREALEAIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLES 404
           +A+EAL+ +AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 405 AMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETLCLKAVPFLSVIQTISIP 464
            ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +E LCLK +P L      +IP
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSLVRYPEKNIP 180

BLAST of PI0025053 vs. ExPASy TrEMBL
Match: A0A5D3CW17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00800 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36
Identity = 90/197 (45.69%), Postives = 115/197 (58.38%), Query Frame = 0

Query: 286 IRLGVVEKFYAAKLNAEEFSVQISGKTVSFNTEAINALYDLPNNVETPGQLYVDNPTKRM 345
           IR  VV  FY A +N EE   ++  K V F  +AINALY L NN    G L  +NP  R 
Sbjct: 58  IRPSVVYLFYRAYINIEELYAEVKEKRVDFGPKAINALYGLKNN--EIGHLIFENPKARD 117

Query: 346 AREALEAIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAM 405
            ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  M
Sbjct: 118 LQDALENIIWPGTKWDRMPTEKYQLFPNDLNTEVSVWLVFIKKNIMPTRHDSTISMEIIM 177

Query: 406 LLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETLCLKAVPFLSVIQTISIPGG 465
           LLY      + N  E+    ++AW++ P GA PF    + L +KA P L   Q + +  G
Sbjct: 178 LLYYNGDSNQFN--EISCEHLIAWVKHPCGAKPFLCLTKQLYIKAYPELEKSQQVQVSNG 237

Query: 466 LCNQMALNRMITFHGHK 483
           +C    L+R IT H +K
Sbjct: 238 VCIGPTLHRFITIHKNK 250

BLAST of PI0025053 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-36
Identity = 102/285 (35.79%), Postives = 147/285 (51.58%), Query Frame = 0

Query: 191 EEF-EEELEAMSPLDDGPSPRKSREVAGPSRGRKKLGRSGPEEHLSGGDTISKTPSINSL 250
           +EF EE+   +SPL++    R+ R+      G+  + R   E+     ++      + S 
Sbjct: 32  DEFGEEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKTQQEEESQEIEDDVLSA 91

Query: 251 -----IKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEF 310
                  VEKG F F  QL  FL  PI+A GW+ F +G   IR GVV+ FY  K++ E+ 
Sbjct: 92  EERKHFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRSGVVKMFYNGKIDTEKH 151

Query: 311 SVQISGKTVSFNTEAINALYDLPNNVETPGQLYVDNPTKRMAREALEAIAWPGAAWEVTP 370
              +  +                             P+    +EALE +AW    W+VT 
Sbjct: 152 YAIVKERR---------------------------EPSDCDMQEALERVAWARKKWDVTS 211

Query: 371 TGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIAT 430
             KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I  
Sbjct: 212 IKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIMEEIPVDVDEIICD 271

Query: 431 SILAWMRAPKGAMPFPSTVETLCLKAVPFLSVIQTIS-IPGGLCN 469
            I AW++ P+GA PFP  +E LCL++   L     I+ +  G+CN
Sbjct: 272 HIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

BLAST of PI0025053 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.2e-35
Identity = 90/187 (48.13%), Postives = 118/187 (63.10%), Query Frame = 0

Query: 308  ISGKTVSFNTEAINALYDLPNNVET-PGQLYVDNPTKRMAREALEAIAWPGAAWEVTPTG 367
            +  + V F TE IN LYDLPN++   PGQ  + +  +  A++ ++ I WP A    TPT 
Sbjct: 1227 VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 1286

Query: 368  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSI 427
            + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + 
Sbjct: 1287 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 1346

Query: 428  LAWMRAPKGAMPFPSTVETLCLKAV-PFLSVIQTISIPGGLCNQMALNRMITFHGHKEME 487
            L+WMR PK A PFP+TV+ LCLK +      I  I + GG CN      + T      ++
Sbjct: 1347 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCNL----DIDTSPPPSLLK 1406

Query: 488  RRAKTSG 493
            R+A TSG
Sbjct: 1407 RKASTSG 1409

BLAST of PI0025053 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 6.1e-45
Identity = 117/297 (39.39%), Postives = 163/297 (54.88%), Query Frame = 0

Query: 147 EAVKVALKRREEKKKMFAEL-----SEQVAELPAKVRALEPERNLDTIAEEFEEELEAMS 206
           E  KVA K +E+ +K+   L       Q  +  A+ +    E+  D  ++EFE+ELE +S
Sbjct: 13  EFYKVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFEKELEELS 72

Query: 207 PLDD---GPSPRKSREVAGPS----RGRKKLGRSGPEEHLSGGDTISKTPSINSLIKVEK 266
           PL+D      P+K R + G        + K  +   E   S  + +     +     +EK
Sbjct: 73  PLEDRVVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEELGKHFMIEK 132

Query: 267 GLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTVS 326
           G+FPF GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N E     + GK V+
Sbjct: 133 GIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYAIVKGKMVN 192

Query: 327 FNTEAINALYDL-PNNVETPGQLYVDNPTKRMAREALEAIAWPGAAWEVTPTGKYQLYPH 386
           F  + +N LY L    VE P       P+    + ALE +AWPG  W++TP  KYQL+PH
Sbjct: 193 FGPKVVNVLYGLRQTTVEYP---IFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPH 252

Query: 387 QLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWM 431
            L T ASVWL FIKK + PTRHD+TI+LE  MLLYCI+ +  +N+ E+I   I AW+
Sbjct: 253 NLKTTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

BLAST of PI0025053 vs. NCBI nr
Match: KAA0062900.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 5.3e-41
Identity = 92/180 (51.11%), Postives = 119/180 (66.11%), Query Frame = 0

Query: 285 KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNTEAINALYDLPNNVETPGQLYVDNPTKR 344
           KIR+ VV KFY  K N  +  + I  +   FN E IN LY+ PN+ E  GQ  V   TK 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 345 MAREALEAIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLES 404
           +A+EAL+ +AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 405 AMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETLCLKAVPFLSVIQTISIP 464
            ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +E LCLK +P L      +IP
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSLVRYPEKNIP 180

BLAST of PI0025053 vs. NCBI nr
Match: KAA0041264.1 (hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK16063.1 hypothetical protein E5676_scaffold32G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 164.9 bits (416), Expect = 2.3e-36
Identity = 90/197 (45.69%), Postives = 115/197 (58.38%), Query Frame = 0

Query: 286 IRLGVVEKFYAAKLNAEEFSVQISGKTVSFNTEAINALYDLPNNVETPGQLYVDNPTKRM 345
           IR  VV  FY A +N EE   ++  K V F  +AINALY L NN    G L  +NP  R 
Sbjct: 58  IRPSVVYLFYRAYINIEELYAEVKEKRVDFGPKAINALYGLKNN--EIGHLIFENPKARD 117

Query: 346 AREALEAIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAM 405
            ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  M
Sbjct: 118 LQDALENIIWPGTKWDRMPTEKYQLFPNDLNTEVSVWLVFIKKNIMPTRHDSTISMEIIM 177

Query: 406 LLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETLCLKAVPFLSVIQTISIPGG 465
           LLY      + N  E+    ++AW++ P GA PF    + L +KA P L   Q + +  G
Sbjct: 178 LLYYNGDSNQFN--EISCEHLIAWVKHPCGAKPFLCLTKQLYIKAYPELEKSQQVQVSNG 237

Query: 466 LCNQMALNRMITFHGHK 483
           +C    L+R IT H +K
Sbjct: 238 VCIGPTLHRFITIHKNK 250

BLAST of PI0025053 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 4.0e-36
Identity = 102/285 (35.79%), Postives = 147/285 (51.58%), Query Frame = 0

Query: 191 EEF-EEELEAMSPLDDGPSPRKSREVAGPSRGRKKLGRSGPEEHLSGGDTISKTPSINSL 250
           +EF EE+   +SPL++    R+ R+      G+  + R   E+     ++      + S 
Sbjct: 32  DEFGEEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKTQQEEESQEIEDDVLSA 91

Query: 251 -----IKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEF 310
                  VEKG F F  QL  FL  PI+A GW+ F +G   IR GVV+ FY  K++ E+ 
Sbjct: 92  EERKHFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRSGVVKMFYNGKIDTEKH 151

Query: 311 SVQISGKTVSFNTEAINALYDLPNNVETPGQLYVDNPTKRMAREALEAIAWPGAAWEVTP 370
              +  +                             P+    +EALE +AW    W+VT 
Sbjct: 152 YAIVKERR---------------------------EPSDCDMQEALERVAWARKKWDVTS 211

Query: 371 TGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIAT 430
             KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I  
Sbjct: 212 IKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIMEEIPVDVDEIICD 271

Query: 431 SILAWMRAPKGAMPFPSTVETLCLKAVPFLSVIQTIS-IPGGLCN 469
            I AW++ P+GA PFP  +E LCL++   L     I+ +  G+CN
Sbjct: 272 HIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

BLAST of PI0025053 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 1.3e-34
Identity = 90/187 (48.13%), Postives = 118/187 (63.10%), Query Frame = 0

Query: 308  ISGKTVSFNTEAINALYDLPNNVET-PGQLYVDNPTKRMAREALEAIAWPGAAWEVTPTG 367
            +  + V F TE IN LYDLPN++   PGQ  + +  +  A++ ++ I WP A    TPT 
Sbjct: 1227 VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 1286

Query: 368  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSI 427
            + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + 
Sbjct: 1287 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 1346

Query: 428  LAWMRAPKGAMPFPSTVETLCLKAV-PFLSVIQTISIPGGLCNQMALNRMITFHGHKEME 487
            L+WMR PK A PFP+TV+ LCLK +      I  I + GG CN      + T      ++
Sbjct: 1347 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCNL----DIDTSPPPSLLK 1406

Query: 488  RRAKTSG 493
            R+A TSG
Sbjct: 1407 RKASTSG 1409

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TZE03.0e-4539.39Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... [more]
A0A5A7V6M52.6e-4151.11Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G0002... [more]
A0A5D3CW171.1e-3645.69Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DVQ61.9e-3635.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U8066.2e-3548.13Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE... [more]
Match NameE-valueIdentityDescription
KAA0048500.16.1e-4539.39protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu... [more]
KAA0062900.15.3e-4151.11gag/pol protein [Cucumis melo var. makuwa][more]
KAA0041264.12.3e-3645.69hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK160... [more]
KAA0054837.14.0e-3635.79hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777... [more]
KAA0049609.11.3e-3448.13transposase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..559
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 560..574
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..503

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025053.1PI0025053.1mRNA