PI0024967 (gene) Melon (PI 482460) v1

Overview
NamePI0024967
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 29500868 .. 29501658 (-)
RNA-Seq ExpressionPI0024967
SyntenyPI0024967
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTATCTCCATCGCATGGGAGTTTCTTCACTCACTTTCTCTATGCCTAATGACCAAAGCAATATCACTCTTCAATATCGTATTCCTTGTAAGTAATTTTCATCAATATTTGGTTTATAATTTATTATATATTCTTGATATCTCTTAATTGATTGATTGATATCATTGATTTCTAGGTCAAGGAAATCTAAACACAAAAGTGCTACCAACATCCATAGTTCAAGATAATCATAAGAATGTTGGCCAGATTGACTATGGTTCCTTCTTTGTATCAATTGCTCTAGAGAAGTTTCAATGTCTTGTAAAGGAGTTAAACCATGCTGGTTATGGTAAATATTATTTTTCTATTAACTTAAACAGTTGTGTTTCTTAATCTCCTCTAATGTGTTAGTTTAATTGTGACAGTCCCGATTACTATTACCAGTACACAAATCAAATTCATCCATGAGAATGACCAAATAGAAGTTATCCTAACAACCGAGGTATATATATTTGTTTTGTTTTCAAATCTATTGATTAAAGTTTTTAAAAAAAATTAGTGTATGAACAAGTTGTGTTTGGGTATCCTTTTGTAGAAAGGGGAATGCATAATTGGAGGTATTGAAGAAGGGGATGAAATTAAATGTGGAATTAGTCTTTATCCAATGGAATTTTACAGAGCTTTCTCATCAAAAAGAGTTTGGTTATTCAATTCATATGTTCCCAATGGTATGCTTTTGATTGCTCCTATGGGATTGTATACTCATATTTCTACATTTTTTCCTCATGATATCTATGGAGGAAATTGA

mRNA sequence

ATGTCTTATCTCCATCGCATGGGAGTTTCTTCACTCACTTTCTCTATGCCTAATGACCAAAGCAATATCACTCTTCAATATCGTATTCCTTGTCAAGGAAATCTAAACACAAAAGTGCTACCAACATCCATAGTTCAAGATAATCATAAGAATGTTGGCCAGATTGACTATGGTTCCTTCTTTGTATCAATTGCTCTAGAGAAGTTTCAATGTCTTGTAAAGGAGTTAAACCATGCTGGTTATGTCCCGATTACTATTACCAGTACACAAATCAAATTCATCCATGAGAATGACCAAATAGAAGTTATCCTAACAACCGAGAAAGGGGAATGCATAATTGGAGGTATTGAAGAAGGGGATGAAATTAAATGTGGAATTAGTCTTTATCCAATGGAATTTTACAGAGCTTTCTCATCAAAAAGAGTTTGGTTATTCAATTCATATGTTCCCAATGGTATGCTTTTGATTGCTCCTATGGGATTGTATACTCATATTTCTACATTTTTTCCTCATGATATCTATGGAGGAAATTGA

Coding sequence (CDS)

ATGTCTTATCTCCATCGCATGGGAGTTTCTTCACTCACTTTCTCTATGCCTAATGACCAAAGCAATATCACTCTTCAATATCGTATTCCTTGTCAAGGAAATCTAAACACAAAAGTGCTACCAACATCCATAGTTCAAGATAATCATAAGAATGTTGGCCAGATTGACTATGGTTCCTTCTTTGTATCAATTGCTCTAGAGAAGTTTCAATGTCTTGTAAAGGAGTTAAACCATGCTGGTTATGTCCCGATTACTATTACCAGTACACAAATCAAATTCATCCATGAGAATGACCAAATAGAAGTTATCCTAACAACCGAGAAAGGGGAATGCATAATTGGAGGTATTGAAGAAGGGGATGAAATTAAATGTGGAATTAGTCTTTATCCAATGGAATTTTACAGAGCTTTCTCATCAAAAAGAGTTTGGTTATTCAATTCATATGTTCCCAATGGTATGCTTTTGATTGCTCCTATGGGATTGTATACTCATATTTCTACATTTTTTCCTCATGATATCTATGGAGGAAATTGA

Protein sequence

MSYLHRMGVSSLTFSMPNDQSNITLQYRIPCQGNLNTKVLPTSIVQDNHKNVGQIDYGSFFVSIALEKFQCLVKELNHAGYVPITITSTQIKFIHENDQIEVILTTEKGECIIGGIEEGDEIKCGISLYPMEFYRAFSSKRVWLFNSYVPNGMLLIAPMGLYTHISTFFPHDIYGGN
Homology
BLAST of PI0024967 vs. ExPASy TrEMBL
Match: A0A1S3C6G9 (uncharacterized protein LOC103497397 OS=Cucumis melo OX=3656 GN=LOC103497397 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.7e-44
Identity = 89/138 (64.49%), Postives = 113/138 (81.88%), Query Frame = 0

Query: 36  NTKVLPTSIVQDNHKNVGQIDYGSFFVSIALEKFQCLVKELNHAGYVPITITSTQIKFIH 95
           N K LP SIV +   +VG +DYGSFFVS+ALE+F+C+V ++ +A YVP+TITS++IKF+ 
Sbjct: 190 NKKELPMSIVAE-PVDVGDVDYGSFFVSMALEEFRCVVNDMENAAYVPVTITSSRIKFVA 249

Query: 96  ENDQIEVILTTEKGECIIGGIEEGDEIKCGISLYPMEFYRAFSSKRVWLFNSYVPNGMLL 155
             D  E   TT++GECIIGGIEEG EIKCGISLYPM+FY+AF+SKRVW F+S   NG+LL
Sbjct: 250 LIDHWETSFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTSKRVWFFSSCDTNGLLL 309

Query: 156 IAPMGLYTHISTFFPHDI 174
           IAPMG+YTHIS+FFP +I
Sbjct: 310 IAPMGVYTHISSFFPQEI 326

BLAST of PI0024967 vs. ExPASy TrEMBL
Match: A0A0A0LJU4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287150 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.3e-43
Identity = 89/136 (65.44%), Postives = 113/136 (83.09%), Query Frame = 0

Query: 43  SIVQDNHKNVGQIDYGSFFVSIALEKFQCLVKELNHAGYVPITITSTQIKFIHENDQIEV 102
           SIV++    VG +DYGSFFVS+ALE+F+C+V+++ +A YV +TITS+QIKF+   D  E 
Sbjct: 2   SIVEE-PAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWET 61

Query: 103 ILTTEKGECIIGGIEEGDEIKCGISLYPMEFYRAFSSKRVWLFNSYVPNGMLLIAPMGLY 162
             TT++G+CIIGGIEEG+EIKCGISLYPMEFY+AF+SKRVW F+S   NG+LLIAPMG+Y
Sbjct: 62  SFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY 121

Query: 163 THISTFFPHDI-YGGN 178
           THIS+FFP DI  GGN
Sbjct: 122 THISSFFPQDIPNGGN 136

BLAST of PI0024967 vs. ExPASy TrEMBL
Match: A0A0A0LMQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287140 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.3e-42
Identity = 87/136 (63.97%), Postives = 110/136 (80.88%), Query Frame = 0

Query: 43  SIVQDNHKNVGQIDYGSFFVSIALEKFQCLVKELNHAGYVPITITSTQIKFIHENDQIEV 102
           SIV++ H NVG +DYGSFFVS+AL+ F+C+V+++  + YVPITI S+QI F+ ++D  E 
Sbjct: 2   SIVEE-HANVGDVDYGSFFVSMALDDFRCVVQDMEDSDYVPITIRSSQINFVVDHDW-ET 61

Query: 103 ILTTEKGECIIGGIEEGDEIKCGISLYPMEFYRAFSSKRVWLFNSYVPNGMLLIAPMGLY 162
             T ++GECIIGGIEEGDEI CGIS YPMEFY+ F+SKRVW F+S   NG+LLIAPMG+Y
Sbjct: 62  SFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVWFFSSCDTNGLLLIAPMGVY 121

Query: 163 THISTFFPHDI-YGGN 178
           THIS+FFP DI  GGN
Sbjct: 122 THISSFFPQDISIGGN 135

BLAST of PI0024967 vs. ExPASy TrEMBL
Match: A0A6J1EJ67 (uncharacterized protein LOC111434948 OS=Cucurbita moschata OX=3662 GN=LOC111434948 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 7.5e-31
Identity = 78/168 (46.43%), Postives = 108/168 (64.29%), Query Frame = 0

Query: 10  SSLTFSMPNDQSNITLQYRIPCQGNLNTKVLPTSIVQDNHKNVGQIDYGSFFVSIALEKF 69
           SS+T S+   Q +  +++  P   +  TK++PTS   +   N G IDY S FVS  L  F
Sbjct: 88  SSVTLSIAEHQRHFAMEFSPPSLVHPRTKLIPTS-PPERDINEGAIDYAS-FVSFDLFHF 147

Query: 70  QCLVKELNHAGYVPITITSTQIKFIHENDQIEVILTTEKGECIIGGIEEGDEIKCGISLY 129
           + LV  L +  +  +TIT++QIKF+ E+  +EV+LTT++ ECIIGG   GDE +  + L 
Sbjct: 148 RRLVTGLENNEHAYLTITNSQIKFLVED--VEVVLTTQRKECIIGGFAAGDEFESAMCLC 207

Query: 130 PMEFYRAFSSKRVWLFNSYVPNGMLLIAPMGLYTHISTFFPHDIYGGN 178
           P EF+  F+S+R+WLF SY P GM LIAPMGLY HIS++FP D Y  N
Sbjct: 208 PWEFFYNFTSERLWLFKSYDPKGMTLIAPMGLYVHISSYFPEDFYVPN 251

BLAST of PI0024967 vs. ExPASy TrEMBL
Match: A0A0A0LQ10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287180 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-30
Identity = 67/78 (85.90%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 100 IEVILTTEKGECIIGGIEEGDEIKCGISLYPMEFYRAFSSKRVW-LFNSYVPNGMLLIAP 159
           +EVILTT++GECIIGG EEGDEIKCGISLYPMEFY+AF+SK VW LFNSY PNGMLLIAP
Sbjct: 1   MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60

Query: 160 MGLYTHISTFFPHDIYGG 177
           MGLYTHIS+F PHDIYGG
Sbjct: 61  MGLYTHISSFSPHDIYGG 78

BLAST of PI0024967 vs. NCBI nr
Match: KAE8651933.1 (hypothetical protein Csa_006731 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 3.6e-59
Identity = 120/182 (65.93%), Postives = 150/182 (82.42%), Query Frame = 0

Query: 1   MSYLHRMGVSSLTF---SMPNDQSNITLQYRIPCQGN-LNTKVLPTSIVQDNHKNVGQID 60
           M+YLHRMGVSSL+F   +MP +QS+ITL+YRIPCQ N   TKVLP SIV++    VG +D
Sbjct: 1   MTYLHRMGVSSLSFCMPTMPTNQSSITLKYRIPCQENPFYTKVLPMSIVEE-PAEVGDVD 60

Query: 61  YGSFFVSIALEKFQCLVKELNHAGYVPITITSTQIKFIHENDQIEVILTTEKGECIIGGI 120
           YGSFFVS+ALE+F+C+V+++ +A YV +TITS+QIKF+   D  E   TT++G+CIIGGI
Sbjct: 61  YGSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWETSFTTQEGKCIIGGI 120

Query: 121 EEGDEIKCGISLYPMEFYRAFSSKRVWLFNSYVPNGMLLIAPMGLYTHISTFFPHDI-YG 178
           EEG+EIKCGISLYPMEFY+AF+SKRVW F+S   NG+LLIAPMG+YTHIS+FFP DI  G
Sbjct: 121 EEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVYTHISSFFPQDIPNG 180

BLAST of PI0024967 vs. NCBI nr
Match: XP_031737287.1 (uncharacterized protein LOC116402216 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 3.6e-59
Identity = 120/182 (65.93%), Postives = 150/182 (82.42%), Query Frame = 0

Query: 1   MSYLHRMGVSSLTF---SMPNDQSNITLQYRIPCQGN-LNTKVLPTSIVQDNHKNVGQID 60
           M+YLHRMGVSSL+F   +MP +QS+ITL+YRIPCQ N   TKVLP SIV++    VG +D
Sbjct: 79  MTYLHRMGVSSLSFCMPTMPTNQSSITLKYRIPCQENPFYTKVLPMSIVEE-PAEVGDVD 138

Query: 61  YGSFFVSIALEKFQCLVKELNHAGYVPITITSTQIKFIHENDQIEVILTTEKGECIIGGI 120
           YGSFFVS+ALE+F+C+V+++ +A YV +TITS+QIKF+   D  E   TT++G+CIIGGI
Sbjct: 139 YGSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWETSFTTQEGKCIIGGI 198

Query: 121 EEGDEIKCGISLYPMEFYRAFSSKRVWLFNSYVPNGMLLIAPMGLYTHISTFFPHDI-YG 178
           EEG+EIKCGISLYPMEFY+AF+SKRVW F+S   NG+LLIAPMG+YTHIS+FFP DI  G
Sbjct: 199 EEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVYTHISSFFPQDIPNG 258

BLAST of PI0024967 vs. NCBI nr
Match: XP_008457793.2 (PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 5.5e-44
Identity = 89/138 (64.49%), Postives = 113/138 (81.88%), Query Frame = 0

Query: 36  NTKVLPTSIVQDNHKNVGQIDYGSFFVSIALEKFQCLVKELNHAGYVPITITSTQIKFIH 95
           N K LP SIV +   +VG +DYGSFFVS+ALE+F+C+V ++ +A YVP+TITS++IKF+ 
Sbjct: 190 NKKELPMSIVAE-PVDVGDVDYGSFFVSMALEEFRCVVNDMENAAYVPVTITSSRIKFVA 249

Query: 96  ENDQIEVILTTEKGECIIGGIEEGDEIKCGISLYPMEFYRAFSSKRVWLFNSYVPNGMLL 155
             D  E   TT++GECIIGGIEEG EIKCGISLYPM+FY+AF+SKRVW F+S   NG+LL
Sbjct: 250 LIDHWETSFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTSKRVWFFSSCDTNGLLL 309

Query: 156 IAPMGLYTHISTFFPHDI 174
           IAPMG+YTHIS+FFP +I
Sbjct: 310 IAPMGVYTHISSFFPQEI 326

BLAST of PI0024967 vs. NCBI nr
Match: XP_031737417.1 (uncharacterized protein LOC116402255 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 6.7e-42
Identity = 87/136 (63.97%), Postives = 110/136 (80.88%), Query Frame = 0

Query: 43  SIVQDNHKNVGQIDYGSFFVSIALEKFQCLVKELNHAGYVPITITSTQIKFIHENDQIEV 102
           SIV++ H NVG +DYGSFFVS+AL+ F+C+V+++  + YVPITI S+QI F+ ++D  E 
Sbjct: 2   SIVEE-HANVGDVDYGSFFVSMALDDFRCVVQDMEDSDYVPITIRSSQINFVVDHDW-ET 61

Query: 103 ILTTEKGECIIGGIEEGDEIKCGISLYPMEFYRAFSSKRVWLFNSYVPNGMLLIAPMGLY 162
             T ++GECIIGGIEEGDEI CGIS YPMEFY+ F+SKRVW F+S   NG+LLIAPMG+Y
Sbjct: 62  SFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVWFFSSCDTNGLLLIAPMGVY 121

Query: 163 THISTFFPHDI-YGGN 178
           THIS+FFP DI  GGN
Sbjct: 122 THISSFFPQDISIGGN 135

BLAST of PI0024967 vs. NCBI nr
Match: XP_022928046.1 (uncharacterized protein LOC111434948 [Cucurbita moschata])

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-30
Identity = 78/168 (46.43%), Postives = 108/168 (64.29%), Query Frame = 0

Query: 10  SSLTFSMPNDQSNITLQYRIPCQGNLNTKVLPTSIVQDNHKNVGQIDYGSFFVSIALEKF 69
           SS+T S+   Q +  +++  P   +  TK++PTS   +   N G IDY S FVS  L  F
Sbjct: 88  SSVTLSIAEHQRHFAMEFSPPSLVHPRTKLIPTS-PPERDINEGAIDYAS-FVSFDLFHF 147

Query: 70  QCLVKELNHAGYVPITITSTQIKFIHENDQIEVILTTEKGECIIGGIEEGDEIKCGISLY 129
           + LV  L +  +  +TIT++QIKF+ E+  +EV+LTT++ ECIIGG   GDE +  + L 
Sbjct: 148 RRLVTGLENNEHAYLTITNSQIKFLVED--VEVVLTTQRKECIIGGFAAGDEFESAMCLC 207

Query: 130 PMEFYRAFSSKRVWLFNSYVPNGMLLIAPMGLYTHISTFFPHDIYGGN 178
           P EF+  F+S+R+WLF SY P GM LIAPMGLY HIS++FP D Y  N
Sbjct: 208 PWEFFYNFTSERLWLFKSYDPKGMTLIAPMGLYVHISSYFPEDFYVPN 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3C6G92.7e-4464.49uncharacterized protein LOC103497397 OS=Cucumis melo OX=3656 GN=LOC103497397 PE=... [more]
A0A0A0LJU42.3e-4365.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287150 PE=4 SV=1[more]
A0A0A0LMQ73.3e-4263.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287140 PE=4 SV=1[more]
A0A6J1EJ677.5e-3146.43uncharacterized protein LOC111434948 OS=Cucurbita moschata OX=3662 GN=LOC1114349... [more]
A0A0A0LQ102.2e-3085.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287180 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAE8651933.13.6e-5965.93hypothetical protein Csa_006731 [Cucumis sativus][more]
XP_031737287.13.6e-5965.93uncharacterized protein LOC116402216 [Cucumis sativus][more]
XP_008457793.25.5e-4464.49PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo][more]
XP_031737417.16.7e-4263.97uncharacterized protein LOC116402255 [Cucumis sativus][more]
XP_022928046.11.6e-3046.43uncharacterized protein LOC111434948 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024967.1PI0024967.1mRNA