PI0023843 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTAATTCTTGTCATTCTTTTGGTCATTCTGCTGGTAAGTGTCCACATAAGGAAAAGCCTCAGGTGCCAAAGGAGGCGGTTATGAGCAAGGCTGCCTCTGGCATGGGTGCTGAGCAGGCTATTGTGGCTTGTGAAGATGTGGTGTTAAAATCCTTTAAGCAGTTAGAGGAAGGTGAGATTCAGGGTTCTCCGGTTCAGCATGTGTCTTTGGCTAACAACGATGGGGTAAGAAGGATGATTTCACTACTATGACTCGTAAGAAGAGGGAGTTAGTATCGGTGAGAGATAGAGGGAAAGGAATGAGTATGCAGCCTCTGCAAAACTCCTTTGGCAGTCTTTCTGTTTGAGTGAGGGAGATAATTGGGTGTTGGCATTACGGGTTAGTACGCCTCCACCCTTACAGATTGTGGGCAGTGATGGTGGCATGCCTATTAGGAGTCCGGATGGTGGTCCGTTGGGGATATGTGTTGATGTGAGTTCCCATGATTAGTTGGTGTTCGTGGAATGTTGGAGTCTAAATGACCCAGTGAAGTGTAGGGCGGTGAGTGATATTTTTAGGGTTTCCTCAATGGGTTTTTGTCGTCTCCTGGAGACTAGAGTTCGAGAGGGGAATTTCTATTCTGTTTCTGCCCGGTTTGGTGATGCCTGGGTTACTCCTGTAGCTATAGTGGCAGTGGTGTTGGTCGGATTTGTGTGATGTGGAAGCGGGATAGATTTTCTTTTACTCCTTGTGTGGTGGATGAGCAGTTTATTTCAGGTGTGATTTTGAATCTACATTCTGGTGTTACTGTAGAGGTGTTTTGTGTTTATGCCTCTAATAGTAATGTGGATCGTCGTGTGCTTTGGCATCGATTAGTTGACATCACTTCTAGATGGTCGATCTAGGGTATTGTCATGGGTGACTTTAATGCTATTCGTGTGCACTCTGAAGCTTATGGAGGGAATCTGATTACTGGTGATATGGAGGAATTTGATCTTGCTATTCGTGAGGCTGACTTGGTGGAGTCGTCTGTTCAGGGTAACTGGTGCACTTGGACGAGTAAGGTGCGTGGTTCTGGGTGGTTGCGTCGGCTTGATCGTATTTTAGTGAATGAGAAGTGGTTAGCTACTTGGCCTAGTTTGCGTGTTTCAGTTCTTCATTGGGAGATTTCTGATCATTCACCTATTCTTTTCTATCCTAGAGTTGAGCAGCAGAGACGTATTGTGTCGTTTCATTTCTTTAACCATTAGGTGGAGGATACTTCATTTAGTAATGTGGTATCTTCGGTTTGGGTAAGAAGGTTGGGTGTTTCTCCGTTAATGAGTCTTATGCGGAATTTGCATGACTTTAAACCTGTGCTTCGTAGACATTTTGGTAGGCATATCTGGGGCCTTAGTGAGGAGGTGTGCTCTGCTAAATAGGCTATGGATAGGGCCCAACGTGAGGTTGGAGGGATCCTAGGTCTGTTGAGAAGAGTTGTCTTACTAGGCTAGCGATTGAGGCTTTTTGGTCGGCTATCCGTCTGGAAGAAGCATCTCTTCGTCAGAAATCTCATATTAGGTGGTTGGAGCTTGGTGATTAGAATTCTTCCTTTTTTCACCGTTCAGTTCATTCCCGTATTTTTCATAATAATTTGTTTTTGTTGTGGATTCTGGGGGTGGTCGGGTGATGTCCCATGATGGGTTGGTTCACAGGTGGCTGTTAACTTTTTTCGTAATATATTAGGTTCTCAAATGATTGGCCATAGGGATCTCTCTCCTTTTTTGGAGGAGGTGGTTCAGTTTAGGTGGTCTGAGAAGTGTTCTCATGTGTTTTAGGCTTCTATTAGGTGTGATGAGATTAGGAGGGTGTTATTCTCTATGGATAGTAGCAAGACTCCTAGTCCTGATGGTTTTTCGGCAGGGTTCTTCAAAGGGGCTTGGAATGTGGTGGGTGAGGATTCTAGTGATGCTGTTTTGCATTTCTTTGACGCTTGTTATATTCCTACTGGGGTTAATGCTACTGCAATAACTCGTATCCCCAAACGTTGGTCCACTTAA ATGTGTAATTCTTGTCATTCTTTTGGTCATTCTGCTGGTAAGTGTCCACATAAGGAAAAGCCTCAGGTGCCAAAGGAGGCGGTTATGAGCAAGGCTGCCTCTGGCATGGGTGCTGAGCAGGCTATTGTGGCTTGTGAAGATGTGGTGTTAAAATCCTTTAAGCAGTTAGAGGAAGGTGAGATTCAGGGTTCTCCGGTTCAGCATGTGTCTTTGGCTAACAACGATGGGTCTTTCTGTTTGAGTGAGGGAGATAATTGGGTGTTGGCATTACGGGTTAGTACGCCTCCACCCTTACAGATTGTGGGCAGTGATGGTGGCATGCCTATTAGGAGTCCGGATGGTGGTCCGTTGGGGATATGTGTTGATGTGGAGGATACTTCATTTAGTAATGTGGTATCTTCGGTTTGGGTAAGAAGGTTGGGTGTTTCTCCGTTAATGAGTCTTATGCGGAATTTGCATGACTTTAAACCTGTGCTTCGTAGACATTTTGGTAGGCATATCTGGGGCCTTAGTGAGGAGGCTTCTATTAGGTGTGATGAGATTAGGAGGGTGTTATTCTCTATGGATAGTAGCAAGACTCCTAGTCCTGATGGTTTTTCGGCAGGGTTCTTCAAAGGGGCTTGGAATGTGGTGGGTGAGGATTCTAGTGATGCTGTTTTGCATTTCTTTGACGCTTGTTATATTCCTACTGGGGTTAATGCTACTGCAATAACTCGTATCCCCAAACGTTGGTCCACTTAA ATGTGTAATTCTTGTCATTCTTTTGGTCATTCTGCTGGTAAGTGTCCACATAAGGAAAAGCCTCAGGTGCCAAAGGAGGCGGTTATGAGCAAGGCTGCCTCTGGCATGGGTGCTGAGCAGGCTATTGTGGCTTGTGAAGATGTGGTGTTAAAATCCTTTAAGCAGTTAGAGGAAGGTGAGATTCAGGGTTCTCCGGTTCAGCATGTGTCTTTGGCTAACAACGATGGGTCTTTCTGTTTGAGTGAGGGAGATAATTGGGTGTTGGCATTACGGGTTAGTACGCCTCCACCCTTACAGATTGTGGGCAGTGATGGTGGCATGCCTATTAGGAGTCCGGATGGTGGTCCGTTGGGGATATGTGTTGATGTGGAGGATACTTCATTTAGTAATGTGGTATCTTCGGTTTGGGTAAGAAGGTTGGGTGTTTCTCCGTTAATGAGTCTTATGCGGAATTTGCATGACTTTAAACCTGTGCTTCGTAGACATTTTGGTAGGCATATCTGGGGCCTTAGTGAGGAGGCTTCTATTAGGTGTGATGAGATTAGGAGGGTGTTATTCTCTATGGATAGTAGCAAGACTCCTAGTCCTGATGGTTTTTCGGCAGGGTTCTTCAAAGGGGCTTGGAATGTGGTGGGTGAGGATTCTAGTGATGCTGTTTTGCATTTCTTTGACGCTTGTTATATTCCTACTGGGGTTAATGCTACTGCAATAACTCGTATCCCCAAACGTTGGTCCACTTAA MCNSCHSFGHSAGKCPHKEKPQVPKEAVMSKAASGMGAEQAIVACEDVVLKSFKQLEEGEIQGSPVQHVSLANNDGSFCLSEGDNWVLALRVSTPPPLQIVGSDGGMPIRSPDGGPLGICVDVEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLSEEASIRCDEIRRVLFSMDSSKTPSPDGFSAGFFKGAWNVVGEDSSDAVLHFFDACYIPTGVNATAITRIPKRWST Homology
BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5D3DSV5 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002900 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32 Identity = 108/285 (37.89%), Postives = 126/285 (44.21%), Query Frame = 0
BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5A7V9H8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00880 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32 Identity = 108/285 (37.89%), Postives = 126/285 (44.21%), Query Frame = 0
BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5D3CLU1 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00420 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 8.0e-31 Identity = 85/188 (45.21%), Postives = 94/188 (50.00%), Query Frame = 0
BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5A7U8G1 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001220 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 8.0e-31 Identity = 85/188 (45.21%), Postives = 94/188 (50.00%), Query Frame = 0
BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 1.0e-30 Identity = 81/175 (46.29%), Postives = 92/175 (52.57%), Query Frame = 0
BLAST of PI0023843 vs. NCBI nr
Match: KAA0062331.1 (hypothetical protein E6C27_scaffold154G00880 [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 3.0e-32 Identity = 108/285 (37.89%), Postives = 126/285 (44.21%), Query Frame = 0
BLAST of PI0023843 vs. NCBI nr
Match: TYK26644.1 (hypothetical protein E5676_scaffold313G002900 [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 3.0e-32 Identity = 108/285 (37.89%), Postives = 126/285 (44.21%), Query Frame = 0
BLAST of PI0023843 vs. NCBI nr
Match: TYK12108.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 144.1 bits (362), Expect = 1.7e-30 Identity = 85/188 (45.21%), Postives = 94/188 (50.00%), Query Frame = 0
BLAST of PI0023843 vs. NCBI nr
Match: KAA0049769.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 144.1 bits (362), Expect = 1.7e-30 Identity = 85/188 (45.21%), Postives = 94/188 (50.00%), Query Frame = 0
BLAST of PI0023843 vs. NCBI nr
Match: KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 143.7 bits (361), Expect = 2.2e-30 Identity = 81/175 (46.29%), Postives = 92/175 (52.57%), Query Frame = 0
BLAST of PI0023843 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.1e-07 Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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