PI0023843 (gene) Melon (PI 482460) v1

Overview


Name	PI0023843
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr06: 12611688 .. 12613709 (-)
RNA-Seq Expression	PI0023843
Synteny	PI0023843

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTAATTCTTGTCATTCTTTTGGTCATTCTGCTGGTAAGTGTCCACATAAGGAAAAGCCTCAGGTGCCAAAGGAGGCGGTTATGAGCAAGGCTGCCTCTGGCATGGGTGCTGAGCAGGCTATTGTGGCTTGTGAAGATGTGGTGTTAAAATCCTTTAAGCAGTTAGAGGAAGGTGAGATTCAGGGTTCTCCGGTTCAGCATGTGTCTTTGGCTAACAACGATGGGGTAAGAAGGATGATTTCACTACTATGACTCGTAAGAAGAGGGAGTTAGTATCGGTGAGAGATAGAGGGAAAGGAATGAGTATGCAGCCTCTGCAAAACTCCTTTGGCAGTCTTTCTGTTTGAGTGAGGGAGATAATTGGGTGTTGGCATTACGGGTTAGTACGCCTCCACCCTTACAGATTGTGGGCAGTGATGGTGGCATGCCTATTAGGAGTCCGGATGGTGGTCCGTTGGGGATATGTGTTGATGTGAGTTCCCATGATTAGTTGGTGTTCGTGGAATGTTGGAGTCTAAATGACCCAGTGAAGTGTAGGGCGGTGAGTGATATTTTTAGGGTTTCCTCAATGGGTTTTTGTCGTCTCCTGGAGACTAGAGTTCGAGAGGGGAATTTCTATTCTGTTTCTGCCCGGTTTGGTGATGCCTGGGTTACTCCTGTAGCTATAGTGGCAGTGGTGTTGGTCGGATTTGTGTGATGTGGAAGCGGGATAGATTTTCTTTTACTCCTTGTGTGGTGGATGAGCAGTTTATTTCAGGTGTGATTTTGAATCTACATTCTGGTGTTACTGTAGAGGTGTTTTGTGTTTATGCCTCTAATAGTAATGTGGATCGTCGTGTGCTTTGGCATCGATTAGTTGACATCACTTCTAGATGGTCGATCTAGGGTATTGTCATGGGTGACTTTAATGCTATTCGTGTGCACTCTGAAGCTTATGGAGGGAATCTGATTACTGGTGATATGGAGGAATTTGATCTTGCTATTCGTGAGGCTGACTTGGTGGAGTCGTCTGTTCAGGGTAACTGGTGCACTTGGACGAGTAAGGTGCGTGGTTCTGGGTGGTTGCGTCGGCTTGATCGTATTTTAGTGAATGAGAAGTGGTTAGCTACTTGGCCTAGTTTGCGTGTTTCAGTTCTTCATTGGGAGATTTCTGATCATTCACCTATTCTTTTCTATCCTAGAGTTGAGCAGCAGAGACGTATTGTGTCGTTTCATTTCTTTAACCATTAGGTGGAGGATACTTCATTTAGTAATGTGGTATCTTCGGTTTGGGTAAGAAGGTTGGGTGTTTCTCCGTTAATGAGTCTTATGCGGAATTTGCATGACTTTAAACCTGTGCTTCGTAGACATTTTGGTAGGCATATCTGGGGCCTTAGTGAGGAGGTGTGCTCTGCTAAATAGGCTATGGATAGGGCCCAACGTGAGGTTGGAGGGATCCTAGGTCTGTTGAGAAGAGTTGTCTTACTAGGCTAGCGATTGAGGCTTTTTGGTCGGCTATCCGTCTGGAAGAAGCATCTCTTCGTCAGAAATCTCATATTAGGTGGTTGGAGCTTGGTGATTAGAATTCTTCCTTTTTTCACCGTTCAGTTCATTCCCGTATTTTTCATAATAATTTGTTTTTGTTGTGGATTCTGGGGGTGGTCGGGTGATGTCCCATGATGGGTTGGTTCACAGGTGGCTGTTAACTTTTTTCGTAATATATTAGGTTCTCAAATGATTGGCCATAGGGATCTCTCTCCTTTTTTGGAGGAGGTGGTTCAGTTTAGGTGGTCTGAGAAGTGTTCTCATGTGTTTTAGGCTTCTATTAGGTGTGATGAGATTAGGAGGGTGTTATTCTCTATGGATAGTAGCAAGACTCCTAGTCCTGATGGTTTTTCGGCAGGGTTCTTCAAAGGGGCTTGGAATGTGGTGGGTGAGGATTCTAGTGATGCTGTTTTGCATTTCTTTGACGCTTGTTATATTCCTACTGGGGTTAATGCTACTGCAATAACTCGTATCCCCAAACGTTGGTCCACTTAA

mRNA sequence

ATGTGTAATTCTTGTCATTCTTTTGGTCATTCTGCTGGTAAGTGTCCACATAAGGAAAAGCCTCAGGTGCCAAAGGAGGCGGTTATGAGCAAGGCTGCCTCTGGCATGGGTGCTGAGCAGGCTATTGTGGCTTGTGAAGATGTGGTGTTAAAATCCTTTAAGCAGTTAGAGGAAGGTGAGATTCAGGGTTCTCCGGTTCAGCATGTGTCTTTGGCTAACAACGATGGGTCTTTCTGTTTGAGTGAGGGAGATAATTGGGTGTTGGCATTACGGGTTAGTACGCCTCCACCCTTACAGATTGTGGGCAGTGATGGTGGCATGCCTATTAGGAGTCCGGATGGTGGTCCGTTGGGGATATGTGTTGATGTGGAGGATACTTCATTTAGTAATGTGGTATCTTCGGTTTGGGTAAGAAGGTTGGGTGTTTCTCCGTTAATGAGTCTTATGCGGAATTTGCATGACTTTAAACCTGTGCTTCGTAGACATTTTGGTAGGCATATCTGGGGCCTTAGTGAGGAGGCTTCTATTAGGTGTGATGAGATTAGGAGGGTGTTATTCTCTATGGATAGTAGCAAGACTCCTAGTCCTGATGGTTTTTCGGCAGGGTTCTTCAAAGGGGCTTGGAATGTGGTGGGTGAGGATTCTAGTGATGCTGTTTTGCATTTCTTTGACGCTTGTTATATTCCTACTGGGGTTAATGCTACTGCAATAACTCGTATCCCCAAACGTTGGTCCACTTAA

Coding sequence (CDS)

ATGTGTAATTCTTGTCATTCTTTTGGTCATTCTGCTGGTAAGTGTCCACATAAGGAAAAGCCTCAGGTGCCAAAGGAGGCGGTTATGAGCAAGGCTGCCTCTGGCATGGGTGCTGAGCAGGCTATTGTGGCTTGTGAAGATGTGGTGTTAAAATCCTTTAAGCAGTTAGAGGAAGGTGAGATTCAGGGTTCTCCGGTTCAGCATGTGTCTTTGGCTAACAACGATGGGTCTTTCTGTTTGAGTGAGGGAGATAATTGGGTGTTGGCATTACGGGTTAGTACGCCTCCACCCTTACAGATTGTGGGCAGTGATGGTGGCATGCCTATTAGGAGTCCGGATGGTGGTCCGTTGGGGATATGTGTTGATGTGGAGGATACTTCATTTAGTAATGTGGTATCTTCGGTTTGGGTAAGAAGGTTGGGTGTTTCTCCGTTAATGAGTCTTATGCGGAATTTGCATGACTTTAAACCTGTGCTTCGTAGACATTTTGGTAGGCATATCTGGGGCCTTAGTGAGGAGGCTTCTATTAGGTGTGATGAGATTAGGAGGGTGTTATTCTCTATGGATAGTAGCAAGACTCCTAGTCCTGATGGTTTTTCGGCAGGGTTCTTCAAAGGGGCTTGGAATGTGGTGGGTGAGGATTCTAGTGATGCTGTTTTGCATTTCTTTGACGCTTGTTATATTCCTACTGGGGTTAATGCTACTGCAATAACTCGTATCCCCAAACGTTGGTCCACTTAA

Protein sequence

MCNSCHSFGHSAGKCPHKEKPQVPKEAVMSKAASGMGAEQAIVACEDVVLKSFKQLEEGEIQGSPVQHVSLANNDGSFCLSEGDNWVLALRVSTPPPLQIVGSDGGMPIRSPDGGPLGICVDVEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLSEEASIRCDEIRRVLFSMDSSKTPSPDGFSAGFFKGAWNVVGEDSSDAVLHFFDACYIPTGVNATAITRIPKRWST

Homology

[Close]

BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5D3DSV5 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002900 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32
Identity = 108/285 (37.89%), Postives = 126/285 (44.21%), Query Frame = 0


Query: 2   CNSCHSFGHSAGKCPHKEKPQVPKEAVMSKAASGMGAEQAIVACEDVVLKSFKQLEEGEI 61
           C  C +FGHS GKCP                                V KSFKQLEEGEI
Sbjct: 103 CKLCCAFGHSGGKCPIN------------------------------VDKSFKQLEEGEI 162

Query: 62  QGSPVQHVSLANNDGSFCLSEGDNWVLALRVSTPPPLQIVGSDGGMPIRSPDGGPLGICV 121
           + S       +N        EGD     L +          SD  +   S  G       
Sbjct: 163 RSS-------SNRPSCQVEKEGDMEDFDLTI----------SDADLVKPSMQGN--WFTW 222

Query: 122 DVEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLSEE-------- 181
           + +D+SF +VVSS WVR   +SPL+SLMRNLH+FKP L RHFG HI  L++E        
Sbjct: 223 NSKDSSFIDVVSSFWVRHESISPLVSLMRNLHNFKPALHRHFGGHIRCLNKETLQLRPSG 282

Query: 182 ------------------------------------ASIRCDEIRRVLFSMDSSKTPSPD 241
                                               A I   E+RRVLFSMDS K    D
Sbjct: 283 WLLDWRKPLFVKSPGFDGWNLVIRPSFVVLFVVIWAAPISPKEVRRVLFSMDSGKALVHD 338

Query: 242 GFSAGFFKGAWNVVGEDSSDAVLHFFDACYIPTGVNATAITRIPK 243
           GFS GFFK  W +V ED  D VLHFF+ CY+P GVNATAIT I K
Sbjct: 343 GFSVGFFKCLWFLVEEDFCDVVLHFFETCYLPHGVNATAITLISK 338

[Close]

BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5A7V9H8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00880 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32
Identity = 108/285 (37.89%), Postives = 126/285 (44.21%), Query Frame = 0


Query: 2   CNSCHSFGHSAGKCPHKEKPQVPKEAVMSKAASGMGAEQAIVACEDVVLKSFKQLEEGEI 61
           C  C +FGHS GKCP                                V KSFKQLEEGEI
Sbjct: 210 CKLCCAFGHSGGKCPIN------------------------------VDKSFKQLEEGEI 269

Query: 62  QGSPVQHVSLANNDGSFCLSEGDNWVLALRVSTPPPLQIVGSDGGMPIRSPDGGPLGICV 121
           + S       +N        EGD     L +          SD  +   S  G       
Sbjct: 270 RSS-------SNRPSCQVEKEGDMEDFDLTI----------SDADLVKPSMQGN--WFTW 329

Query: 122 DVEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLSEE-------- 181
           + +D+SF +VVSS WVR   +SPL+SLMRNLH+FKP L RHFG HI  L++E        
Sbjct: 330 NSKDSSFIDVVSSFWVRHESISPLVSLMRNLHNFKPALHRHFGGHIRCLNKETLQLRPSG 389

Query: 182 ------------------------------------ASIRCDEIRRVLFSMDSSKTPSPD 241
                                               A I   E+RRVLFSMDS K    D
Sbjct: 390 WLLDWRKPLFVKSPGFDGWNLVIRPSFVVLFVVIWAAPISPKEVRRVLFSMDSGKALVHD 445

Query: 242 GFSAGFFKGAWNVVGEDSSDAVLHFFDACYIPTGVNATAITRIPK 243
           GFS GFFK  W +V ED  D VLHFF+ CY+P GVNATAIT I K
Sbjct: 450 GFSVGFFKCLWFLVEEDFCDVVLHFFETCYLPHGVNATAITLISK 445

[Close]

BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5D3CLU1 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00420 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 8.0e-31
Identity = 85/188 (45.21%), Postives = 94/188 (50.00%), Query Frame = 0


Query: 123 VEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLS----------- 182
           VED SF  VV+ +W    GVSPL+SLMRNLH  KP+L R FGRHI  LS           
Sbjct: 10  VEDPSFIEVVARMWSSHEGVSPLVSLMRNLHHLKPILHRRFGRHIKSLSEEMRIAKEAMD 69

Query: 183 --------------------------------EEASIR---------------------- 242
                                           EEAS+R                      
Sbjct: 70  IAQREVERNPMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWVSSHDGVAQMAALQL 129

[Close]

BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5A7U8G1 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001220 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 8.0e-31
Identity = 85/188 (45.21%), Postives = 94/188 (50.00%), Query Frame = 0


Query: 123 VEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLS----------- 182
           VED SF  VV+ +W    GVSPL+SLMRNLH  KP+L R FGRHI  LS           
Sbjct: 10  VEDPSFIEVVARMWSSHEGVSPLVSLMRNLHHLKPILHRRFGRHIKSLSEEMRIAKEAMD 69

Query: 183 --------------------------------EEASIR---------------------- 242
                                           EEAS+R                      
Sbjct: 70  IAQREVERNPMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWVSSHDGVAQMAALQL 129

[Close]

BLAST of PI0023843 vs. ExPASy TrEMBL
Match: A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.0e-30
Identity = 81/175 (46.29%), Postives = 92/175 (52.57%), Query Frame = 0


Query: 123 VEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLSEEASI------ 182
           VED SF  VV+ +W    GVSPL+SLMRNLH  KP+LRR FGRHI  LSEE  I      
Sbjct: 243 VEDPSFIEVVTRMWSHHEGVSPLVSLMRNLHHLKPILRRRFGRHIRSLSEEVCIAKEAMD 302

Query: 183 ---------------------------------------RC----------DEIRRVLFS 242
                                                   C          +E+R VLFS
Sbjct: 303 IAQREMAVNYFSNSVGSQEIGYRELTPIIDDIVQFQWSEECCQALQVPISREEVRSVLFS 362

[Close]

BLAST of PI0023843 vs. NCBI nr
Match: KAA0062331.1 (hypothetical protein E6C27_scaffold154G00880 [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-32
Identity = 108/285 (37.89%), Postives = 126/285 (44.21%), Query Frame = 0


Query: 2   CNSCHSFGHSAGKCPHKEKPQVPKEAVMSKAASGMGAEQAIVACEDVVLKSFKQLEEGEI 61
           C  C +FGHS GKCP                                V KSFKQLEEGEI
Sbjct: 210 CKLCCAFGHSGGKCPIN------------------------------VDKSFKQLEEGEI 269

Query: 62  QGSPVQHVSLANNDGSFCLSEGDNWVLALRVSTPPPLQIVGSDGGMPIRSPDGGPLGICV 121
           + S       +N        EGD     L +          SD  +   S  G       
Sbjct: 270 RSS-------SNRPSCQVEKEGDMEDFDLTI----------SDADLVKPSMQGN--WFTW 329

Query: 122 DVEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLSEE-------- 181
           + +D+SF +VVSS WVR   +SPL+SLMRNLH+FKP L RHFG HI  L++E        
Sbjct: 330 NSKDSSFIDVVSSFWVRHESISPLVSLMRNLHNFKPALHRHFGGHIRCLNKETLQLRPSG 389

Query: 182 ------------------------------------ASIRCDEIRRVLFSMDSSKTPSPD 241
                                               A I   E+RRVLFSMDS K    D
Sbjct: 390 WLLDWRKPLFVKSPGFDGWNLVIRPSFVVLFVVIWAAPISPKEVRRVLFSMDSGKALVHD 445

Query: 242 GFSAGFFKGAWNVVGEDSSDAVLHFFDACYIPTGVNATAITRIPK 243
           GFS GFFK  W +V ED  D VLHFF+ CY+P GVNATAIT I K
Sbjct: 450 GFSVGFFKCLWFLVEEDFCDVVLHFFETCYLPHGVNATAITLISK 445

[Close]

BLAST of PI0023843 vs. NCBI nr
Match: TYK26644.1 (hypothetical protein E5676_scaffold313G002900 [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-32
Identity = 108/285 (37.89%), Postives = 126/285 (44.21%), Query Frame = 0


Query: 2   CNSCHSFGHSAGKCPHKEKPQVPKEAVMSKAASGMGAEQAIVACEDVVLKSFKQLEEGEI 61
           C  C +FGHS GKCP                                V KSFKQLEEGEI
Sbjct: 103 CKLCCAFGHSGGKCPIN------------------------------VDKSFKQLEEGEI 162

Query: 62  QGSPVQHVSLANNDGSFCLSEGDNWVLALRVSTPPPLQIVGSDGGMPIRSPDGGPLGICV 121
           + S       +N        EGD     L +          SD  +   S  G       
Sbjct: 163 RSS-------SNRPSCQVEKEGDMEDFDLTI----------SDADLVKPSMQGN--WFTW 222

Query: 122 DVEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLSEE-------- 181
           + +D+SF +VVSS WVR   +SPL+SLMRNLH+FKP L RHFG HI  L++E        
Sbjct: 223 NSKDSSFIDVVSSFWVRHESISPLVSLMRNLHNFKPALHRHFGGHIRCLNKETLQLRPSG 282

Query: 182 ------------------------------------ASIRCDEIRRVLFSMDSSKTPSPD 241
                                               A I   E+RRVLFSMDS K    D
Sbjct: 283 WLLDWRKPLFVKSPGFDGWNLVIRPSFVVLFVVIWAAPISPKEVRRVLFSMDSGKALVHD 338

Query: 242 GFSAGFFKGAWNVVGEDSSDAVLHFFDACYIPTGVNATAITRIPK 243
           GFS GFFK  W +V ED  D VLHFF+ CY+P GVNATAIT I K
Sbjct: 343 GFSVGFFKCLWFLVEEDFCDVVLHFFETCYLPHGVNATAITLISK 338

[Close]

BLAST of PI0023843 vs. NCBI nr
Match: TYK12108.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-30
Identity = 85/188 (45.21%), Postives = 94/188 (50.00%), Query Frame = 0


Query: 123 VEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLS----------- 182
           VED SF  VV+ +W    GVSPL+SLMRNLH  KP+L R FGRHI  LS           
Sbjct: 10  VEDPSFIEVVARMWSSHEGVSPLVSLMRNLHHLKPILHRRFGRHIKSLSEEMRIAKEAMD 69

Query: 183 --------------------------------EEASIR---------------------- 242
                                           EEAS+R                      
Sbjct: 70  IAQREVERNPMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWVSSHDGVAQMAALQL 129

[Close]

BLAST of PI0023843 vs. NCBI nr
Match: KAA0049769.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-30
Identity = 85/188 (45.21%), Postives = 94/188 (50.00%), Query Frame = 0


Query: 123 VEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLS----------- 182
           VED SF  VV+ +W    GVSPL+SLMRNLH  KP+L R FGRHI  LS           
Sbjct: 10  VEDPSFIEVVARMWSSHEGVSPLVSLMRNLHHLKPILHRRFGRHIKSLSEEMRIAKEAMD 69

Query: 183 --------------------------------EEASIR---------------------- 242
                                           EEAS+R                      
Sbjct: 70  IAQREVERNPMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWVSSHDGVAQMAALQL 129

[Close]

BLAST of PI0023843 vs. NCBI nr
Match: KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-30
Identity = 81/175 (46.29%), Postives = 92/175 (52.57%), Query Frame = 0


Query: 123 VEDTSFSNVVSSVWVRRLGVSPLMSLMRNLHDFKPVLRRHFGRHIWGLSEEASI------ 182
           VED SF  VV+ +W    GVSPL+SLMRNLH  KP+LRR FGRHI  LSEE  I      
Sbjct: 243 VEDPSFIEVVTRMWSHHEGVSPLVSLMRNLHHLKPILRRRFGRHIRSLSEEVCIAKEAMD 302

Query: 183 ---------------------------------------RC----------DEIRRVLFS 242
                                                   C          +E+R VLFS
Sbjct: 303 IAQREMAVNYFSNSVGSQEIGYRELTPIIDDIVQFQWSEECCQALQVPISREEVRSVLFS 362

[Close]

BLAST of PI0023843 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-07
Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 180 EIRRVLFSMDSSKTPSPDGFSAGFFKGAWNVVGEDSSDAVLHFFDACYIPTGVNATAITR 239
           EI   +F+M  +K P PD F+A FF  +W VV + +  AV  FF   ++    NATAIT 
Sbjct: 535 EITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITL 594

Query: 240 IPK 243
           IPK
Sbjct: 595 IPK 597

The following BLAST results are available for this feature:

BLAST of PI0023843 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023843 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DSV5	1.5e-32	37.89	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V9H8	1.5e-32	37.89	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CLU1	8.0e-31	45.21	Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak...	[more]
A0A5A7U8G1	8.0e-31	45.21	Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak...	[more]
A0A5A7UVV0	1.0e-30	46.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0023843 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062331.1	3.0e-32	37.89	hypothetical protein E6C27_scaffold154G00880 [Cucumis melo var. makuwa]	[more]
TYK26644.1	3.0e-32	37.89	hypothetical protein E5676_scaffold313G002900 [Cucumis melo var. makuwa]	[more]
TYK12108.1	1.7e-30	45.21	non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw...	[more]
KAA0049769.1	1.7e-30	45.21	non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw...	[more]
KAA0057641.1	2.2e-30	46.29	hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]	[more]

BLAST of PI0023843 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	2.1e-07	44.44	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023843.1	PI0023843.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003964	RNA-directed DNA polymerase activity