PI0023626 (gene) Melon (PI 482460) v1

Overview


Name	PI0023626
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	survival of motor neuron-related-splicing factor 30
Location	chr10: 4565083 .. 4578645 (+)
RNA-Seq Expression	PI0023626
Synteny	PI0023626

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGATTTCATAGCCCAAACACTGAGCCTAAAAGGGCTGTGTTCTTAATCTGGACGGGGGAGTTTAGCGTTCGTGTGTGTGTATTTCATCATCCTCTCATTCTCTTTCTAAAATTTTTTCCAATTTTACGCTGTTTTTCTCTCTTCTCCTCCTCCTCCTCCTCTGTTCATCTAATTCTACCAAAATAATGCAAGGAGGAGAAGATGTTAGCATTGAAGAGTTGGCTAATAATCTGTCTACCTACAAAGACCAGCTTCACCAGGTGTTCCTCTTCTCTATTTCTTTCTTCCTAGTAATCCCCTTCATTTTCTTTTTTGTTGAAAATGATTTTGTTTCACTTACTGGGGCTCTCTTTTTCTAGACTTATTCTAACAAAAATTGATTTTGATGAACTTTTAGACCTTTTCCGCTATCATTCTTGACTTCTTCCTAGTACTTTGTATCTGAATTAGGGGTTTGCTTACCACCTTGGACTGTTGCAGCGAATCCGGAGGGGATGGAACTTGTATTCTGGATAATTGCATTAAACCTAGAAATTTAGAACTTAATCCACATAAATTAGTGTCAATATTCTTTTTAGGACTTTTCAGTTCTTTATCTGTTCTCCTGATTCTTTATTACCTTTTATTACTTAGGATACTGAAAATCTTGAGCAGGGTTTAAAAGCATCTAAATGGTTTTTATATTTGTACGGCGAATTTTTAATTATCAATCAGTCACTTCCTCCACCTAACTACATGAATTCTTGGCTTCCTCACTTTGTTTCATTTTGTATGTATGTTTTTTTTCTGTTGGGTAAAATAACTTTTTTCTTTCCTGATCCAGGTCAGACAGCTGTTAGATGATGATCCTGGCAACTCTGAATACATTGATATGGAAAAGGAGCTTGAAGAGGTAGTTTGTTTTTTTCCCTCCTAGTATGTCTATCCTTCATTGTGAACTCGTCATATGTGTATGTATGGTTTAGCACTCTTCATATTCCCGCTGAATGTATTTTTAGGTTCAGCTTCTGCTGTAGCACTAAGGATCAGAGAACGCTCAGAACTATTATTTTTATTATGTGGGTTTCCAGACATGTTTGCTTTGTTTCGTTTGTTTGTCTTCCTTTTTCACTTTAAAGGAAACATGTTGTTGAAATAAGAAAGAGTTATGGCCCCTGTGGAGACTGTCATTTTCATTTTTGGGAGGAAAAGGTGAGGGGGTTGTATCTTTCATTTGTGTGCTCCAGAGCTTTAATCTCTGGTCATAAGTGATCATTATTGGATATGTGTAAAAAATTTGAAACTTCATCAAGATGCACATCACTTCTACCTTGGTTCCCTTGCAGGTGTGCTAATATTCGTGATGGCCAGTCTGCTCTTCCCCTGACCTCCTTTCAGATGCTGATCCTGAGATTTAAGTTCTTGTGTTTTTTCTTTTTTCTTTTTTGGGGACAAATACCTGCTCTTTATGAAATTTACAGTTGGAGATATATTTTAACTGAAACATTGGACTTGGGCTAAAGTTGCAGTAATGCAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTAGAAACTGGTGATGACAGTGCATCAACTGGTTTCCAGCAGCCTAAAGAAAATGAAATGGTATGTTCACATTTGTCCCCATTTGCGCATTGCATTTTTCTGCTGGAAGCACCATAATGTTATAGATGGTTATAGCCTTAGATTTAACATGCACTGCTTGGATCTTTGTGTGGTTTGTTGTGTATGTTAGAACTGTTTTTGTGTTCGTGCTCATATGCGCAACTGCAAACACATTTGTGTCTGTGCTTTGAAGGCTTAATATCTTTGCCTTATATGGAAGCATCCTTCGTAAACATTAACTCGCACGTGGTTTATTCTGATGTGCTAATTTAATAATACTCTGCTGTGCATATATTTGGGCTGGTATTCAATTATTTGCCTCTCTGTAAGCTTCTGCTTCAAAAGTGATTTATATTTTTGATTTCAACCGTTGTTAACAATTAGAGGTTCAATTCTCTATCCGCCCTAATGTGGGAAGTGTCGTTTCTTATAGTTGGCAGGGGTGTGTGCTATCGTGAATCTTTGGGGGGAAAGGAGTATAGTGTTTAGAGGGTCGTATAGTGTCCCTAGTGATGTATGGGTCATTAAAAGGTTTCATATTAGATAACATGAGGTTTCATCTCAAAATCAATTGGTAATGAGAGGAGTAGCCCATGTATCTTGTAAAGATTGTGATTTCTCTCCACTTTTTCAATGTGGGATTCTCAACATACCTTTTCAAGATGGTGACTCTTTGGGTTCACCATTCTTGGATTGACTAAATACCCATTTGGGCTTCAGGGGCCTTGATACCATGTTAAATCACTAGTTGACCCAAATGCTTAAGTTGATGACTATTGTGCTTTATTGTGCCTTGTTGAGCTCTAAAAAACAATGGTTATAGATTTTTGGATCAACTAATTCTCCAGGCCAATTGCTCCAGCATTTATATAGAGTTTAATTAGTCTTTTTGATGACTTATTGAAACAACCATCCATAATCTGGAGGGCCTTCTAAGTATTTTAAAATCCTATTACAACCCCAGAATGATGCCCATTTAGACCATTCATATATTGACCAACAAAGCTTAACATAAAATGCAATATCTAATCTAGAATGTGCTATGTGGATTATCTTTCTACAATTCTTTGATATACGTCATTGTCAATTGGAGTAACCTTTTTACTCCTGTGTTGGACAAAATTTAGATCAGCAGGTGTTTTTTACTCGTCTGTTATTTTTGTCCTCGATGGGAAACACCTCTTGGCATTCTATAGCTTTTTGGGTTGTTGCTTTGAAGATCTTTTTCCTTTCAGTTTGATATTCATTTGAAGGTTTTCGGTTGGTATAATGAAGCCTTTTTTGAAATATTACAAGGTTTTTTTTTGCCTTGGAGTTTAATGCGGTTGTGCATTTTTTAGTTGGCTCTTTTTTTTGGAATTTGATTATGCTTACGGTTAGTATAGACTAGTTGGTTTTTGTGTTTTCTTTTGAGCTTCTAAGTCCAATGCTTTTTAGTTTTCCCTAGCTCCTCTCTTCTTAGGCTTCTTTTGCTCGGAGCTCAGCAAACATGACCTTTATTTTAACGTTTTGGTTAGATCTTTAATTTTGGTTCCTTATTGAAACAACCTTACTTGATCAAATTTGTTCTATACTAAGAAGCACAGACACTTTAGTTTGGCTAGCGTGTTTGTGTCTGACATGTGTCGAACACTTGGTGGATACCTATTGGACACTTGTTAGTGCAACAAATGCAGTAGACATGCATAGAACACTCGTTAAGTAGACTAAAAAGACATATATATGGCAATAATATTAATTTTTGAGTGTGGAAATACATCAAGCCAAGTCTTTTAAACATACAAATGCATCGATTCATTTACTATGAATTTTCTTTTACTAAGGTAGTATATAATTTTAAAAATGAATATTTTAATAAATGTGTCCTTGCCGTGTCATGTCCTAGATTTTTAAAATATGGCATGTCGTCATGTCCTAGATTTTTAAAATATGGCATGTCGTCATGTCCGTATCCATGTTGTATCCATGTCTTTGCTTCTTAGGTTCTACCGGTTGTACAATTGTGCCTTTTGAGTTCTTACGACTATGGTTCCTTGTTGAGGAGGTTTTAGTATTATTTGGATTATTATTGATTTTTTTTTGTATTCCTTCACTGGAGCTTCAATGAAAATTCTTGTTTCTTGTTTCAAAAAGAATTTAAGAACTCTAGAATGTATTTTCATTATGAAATTGCCATTCTGGATCTTATCACTCCCATGCTAAGAAAGATCCATCTTTTTAAATTTTGATCTTAGAAACACAAACACAAATATGGATAAGGGACATAGATATGACAGGACGTGATGATGCGTCAATTTCTAAACTAGGATACAAATATGTTGAGGATAAACTATGTGTGTGTGTGTGTATTGATTGAAATAAACAACTTTTATTGAGAAAAAATGAAAGAATACATGGGTTCACCAAAAACCAAGCCCACAAAAAATAGGGGACCCCCACTAAAAGAAGGGGTCCAACTATACAAAATCATGTGAAGAGGATAATTACAAAAAGTCTTTGAAATTGAAGCGAAAAGAGAAACATGATATCGAATAAAGGCACTTTTCGAAACCCTTGGAAAGATGTTTCTTTTGAGCTCCTGTCTTTCTCTCAGTTTACTTGTTTTGTTGTATTGTGTGGGATGGCTAGGACACTTATTTTTAGGAGGATCATTGGGGTGGGGAGAGGTCCCTTTGTTCTTTGTTTCCACATCTTTACCACTTATCCTCTTTTACAAACCATATGATTTCGAATCTTTTGGTCGACTCTGAGAATTCTGTGCACCTTTTCCTTTGGGTTATGTCGCAATTTGTCCAATAGGGAAACGACGGAGGTTGCCTCTATTCTTTCTTTGCTTGAGGGGTGTAGTTTTAGGGAGTGGAGAATGGATGTTCGTGTTTGGAGTCCTAACCTGAGTCAGGTTTTACGTGTAAATCTTTGTTCAGCTTACTCTTGGATCCGTCTCCTTCTAGGGTATCTGTTTTCGATGTGGTCTGGAAGATTAAGGTTCCTAAGAAAGTTAGGTTCTTTATTTGGCAAGTCTTACTTGGTTGGGTTAACACTGTTGATAGGGTTGTTAAGAGGAGGACTCTTCTTGTTGGACCTTTTTGCTGTTTGCTTTGTTGGAAGGCGAAAGAAGACCTTGATCATCTCTTTTGGGATTGCCAGTATGTGCGTGCTGTGTGGAGTTTCCAGCAGGAGTTTGGCTTTAACTTTGTTGGCCAAAGGAGTGTTCGTGCTACGATCGAGGAGTTCCGCCTCCATCCGCCCTTTAGAGAAAAAGGGTGTTTTTTTGTGGCTTGCTGGCAGTGTTTTCAAAGCACAAGGCGTACCTTAAGGTGATAAGTCTCCTAATCGCCTCAAGGCAAGAGGCGACCAAAAGGCATCGCCGGAGTAAAGCAAGGTGCACTTAATAAAATAATCAATTATCATTACCTAAAACTATTATAGGTAAAAGAAAAGGAGTATTTAATTCTCAAAATACAAAAATATTAATCTAAGCTATGTAATATTTAAGTAAACTTAGACTTACACCATCAGAAAAAACTTACAAGAGTTAGCCTATGACAATTAAAAAGGACATGCTTTAAATAATGGCAATTGTTTCGGAATAGATTTTTATTCTTCAACCACAAAGATAAAAAAATTGATTAACAAATGACACTACCAAGACATTGACTGGACAAGAGAAATAATGGCCATTTGTCAAAAAAGGAGGAGAGAGACTGCATGCAACATGTAGCATGCAAGAACTTTTTTTAGTGTCATGCTTTGAACATTAATGAAGGTGCATTTTCATAACTTCGGACTTTTTAACTTCTATTTTTTGCTCTTAATTTCATAACATTAGACTTTACATTTTCTTCTTACTCTTATTTTCATAAGTTCAGACTTTTCATCTTCTTCTTTTTTCTCTTAACCTTTCCAACTCTTCTTATTTTTCTTCTTCGTACTATTATTTTTCACTTTTCTTCTTTTCTTCTTTTCTTCTACTTCTCCTGCTTTGTGTCTTCTTTCTTATTCATCACCATTTTCTGTCTTCCTAATCCTCTAAATCTTCTCTTCGTTTTATCATTTTTCTACTCCCAAGTCCCAGCTCCTTTATTTCTCCGTTACGAAATATTAAAAAGAACAAGAAGAAGAAGAATAGAAAAAAAAATGACAAGTGCTTGCCTACCTATATGGTGCAGGCGCAACATGGTGATAAAAGGAAAAACCAGGCGAGTGCCTGGTTGAAGGTGCTTGCCCTAGATGCCTTCAAGGCGCAATGACCGGAGGTTGCCTTGCCTCTCGCCTGAGGCGCATGCCTGGGGTAGGCTTGAAAATACTGCTTTCTGGGGTGTGTGTTGTGATTGGGATGTTTGGGGGGAAAAGAATGATCTGGTGTTTCGTGGTAGCAATGTTTTAAAATGCCCAAGGCGCACTAAGGCGCAATGGCCCTCTGGAGCCTAGGCTTCTGCTTTTTTCGTGAAGCATACCATATATTATATATATATATACATGTTCATTTACACAACCAAAACACAAATGGATAGAAAGGAGACTTGTAAAAAAAAATATATCTAAGAGTTAAATATTAGTCATTTAACACCAAGTTAAGTGAAATGACACGAAAACAATCACAAATACAATTCTAAAATCCTAAAGATCGAAGTCATCTTCACTAAATAGGTCTTCATCTTCATTCTCTCCATCATTCAACTTATAACCATCTATATCTTCTTCGTCCCTCTCAAAGTCATCCAAATTAACTGGTGTGGGGGTGGGTTGGGGCGGTAGTTGTGTGGAAGATGAAGATGGACACGAAGCTTTAGTCTAGACTTAGTTCTTGAGGAACCAACTCTAGAATATAGGTAGGTTCTTTGCTCCAGCAACTCTTGAAACATCGCCTCATGTTAAAGAATCATCTAAGAAAACAAGATCCTCATCCTCCTCTGAATCGTCATCCATTCTTTCAAGCAACCATTCATTATTTTCATCGATTTCTTTTATAGAGATGGGGTTGATGATGTCTTGAATATTATATCGACGCTTGACTGTTCTATTATATTTTATGAAGACTAAACCATTTAGTCGACTTTGAGCAAGTCTATTCCTTTTCTTGCTATGAAGCTGCAAGTATAGAACACAAGTTTTATTGTTCAGTTCAATTACATTCACATCTAAAGGCACTACAAGTAATAGAAGATACCAAAACCTGTTAAAAAACACTCCAATTACATTCACATCCCGAGGCACCGTAAGTGAGTCCTAAAATTCTCATAGCGAACTTTTGCAAGTTGGGAGTTGATTGTCCGAAATCATTCCATCATTCACTATAGATCAAAAGTATATTAGTAGCTTTCTTTTTAATGTTATTCAATGTTTAATCAAAGACTTAAAGTTAAAGTTGACTTGGAGATATTTTGTCCCTCTGTCTAATTTCTAATGACGGTCGAAATAGTCCTTCAACTTTCTTGTATTTGGTTAGCTCTCCAAGTATCTTATCTTTGAGTGTTCAAGGAAGCAACCATCTTTGTTATGCACGTATACAACCCATTGAGAATTTCATCATCAACTTGAATATTTGGATTTGAGTAATATAATTTTGGGTTTAGATAATATCCTGCTGCATGCAAGGACCATGCAACTGAAGATTCCATCGTCAACCAATTATTGTAAAAATGTCTTTGTACTTTTCTTCCTTACCACCAAAGGATTTGGCGATGACCTCCTTAGCTCTATCCATAGTCTTGTAAATGTATCCCATTGGAGGCTTCTTCTCACCATCCACCAACCTAAGTACTCGCACTAAAGGGCCAGATACTTTAAGAGCAAACACGATGGTATTCCAAAAAGTTGTGAACAAAATTGTGTGAGCAACCCGCTTTCCTTGTTGTTCTTTGCTCCATTTGCTATTTTTCTATTCGTCTGAAGTAAACATCTTTCTCAAGTTATTTTTCTGGCAATATAAACTTGATAATGTTATGCAAGCTGTAGCAAATTGAGTCTTAGCTGGTTTAACTAACTCCTTTTGATTAGTAAACCTGGACAAACATAAATTAAATTGCTAACACCCATGCCACTTTTTAATGTTTTGTGAATATGAGGGATCTTGTATATATCCTCCAACATCAAATCTAAGCAATGAGCACCACATGGAGACCAAATTGATTGTGCTCGTTTTGCTTCTAACAATCTCCTTATTAACAAAGTAAAATAAGAACATATTTAGGCTTCCTAAATGTATAAGCATAAGACTAACAAATGTAATAAAGAGTTGGTACTTTGCATTCTTTCTTACCTGCCGTTACATTTGTTGAGGCACTACCAGTAAGAACTTGTACGACATTGGCTTCTCCAATGCGCTCTACGAAATTGCTGAGTAACTCAAACATTTTCTTTCCATTCTTTACATAAGATGAAGCATCGATAGACTCAATGAACATGGTGCCTTTAGGACTATTAATTAAAAAGTTAATTAATGTCCTATTTCTTCTATATGTCCATCCATCAGCCATAATGGTGCATCCAACCTTCACCCACTCAGCCTCTTCATCAACTCATTTGTGGATTCTAATTCATTTTATAAACACAGCACTCTCAATTCATGATACGATGGTGGTTTCAATCCAGGATCAAATTGTTCTATTGCCTCAATTATAGGGCAAAGCTATCATAAGTGCAAGCATTTAGAGGCACTCCAATATCATAAAACCAACGAGCAATTCTTTGGATGGTTTGCTCCCTCATCTCCTTTTTGTATGCTTCATTCATCATGCTTTGTATTCCCTTTCCTTTGTCATTCTTTTGATTTTGAACCACAACTTCTGGGTTAGGTGTAAAATATACATCCATTGGACCCTTTTGCCTTGGCTTTTTTGAACCCGATGCCACTCTTTTATTCGGGTTACTTACACTTCATCTTCATCTTCATCCTCAATACCATAAGCGTCCACGTCAATATCAACAATCAAATTTCTTTGCTCTTTAATCTCCTTTTTCTTGAGGCTTAAATTTCTTCCTTCACATGATCAAGGAATTTTCTACCAGCAGTGACATTTCTATAACCACCAACAAGGTGTTTTTCATTCTCTAGAGTCCTCCTTTAGTTGCTTTTGAATAATATCCACACACTAATGTATTAAGATCTTGCTCATTTTGCAATCGAGCATATTTCCATGCTGGATCTTTTCTTAAACTGTACTCAGCCATCTAAAATTAGACTAATTAGAAACTAACGCAAGAAATTGATCACAAAAGTTAGGAGTTGGGACATACCAAAAATTTAATGAAGATTGAACTTCAAACGCAACTGTTTTGCAGAGTTTTCAGCAAGAGGAGATGAAGTTGACGCCTTTAAGGTTGCTTTATTTTACTCTTTTCTGTTTTTTGAAGACAAAACTCAAAGAACAGAGACTTAAGAAAACAGAGGCTTAAAAAAAGGAGAAGAGGAGGAGTTCTGTTTTTTTTTTTTTTTTTTGTTGAAGGAGAAGGAGAAGGAGACGTTGAAGAGCGTTCAGTTTTTTTTAAAGAGCTGAGGAGGTGTTCTGTTTTTTTTTTTCTTGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGAAGAGGAGGAGGAGACGTGAGTACCGTTTTTTGAAATAGAGGTTCAGCTTGTACTTTAAATCAATCTTAGCCATAGGTATAAATTGTATAATGATGCTTTATTTCGAATTAGGTTAAGAAAAATATAAATATGTTATATTTTATATTAAACGACAGCCAAATTTGTGTTTTTAAGGGATTTTAAAGAAAAAAAGCTCAAAGAGGCGCTTTGGAAAGGCGGGCGCCTTCCTCAATTCCTAGACGAGGCGCCAATATTGGGCCTAGGTGCGTGTTCAAGTGTGCCTTTCAAAACACTGCATGGTAGAGACTAGAGAGAGGGACCATAATGAGGTTTGGGATTTGAATAGATTTTATGTGTCCATTTGGGCTTCAGTTTCAAAGACCTTTTGTAACTATTCCTTAGGAAACATTTTAATTAGCTGGAACCTTTTTTTATAAGTGGGGTGCTTTGTTGGGCTAGATTTTTTTGTATGCCATTGTATTATTTCATTCTTTCTCAATGAAAGTTGTTTCTATAAAAAACAAGGCAAAGAATCCTCTCCCAAATTTCCCAATTCGGAAATCCAACATAAAACTCTTAACACACTTCCTCTCAACCCACACCTTCTATTTATCGCAAAAAAACCCTAACAAACTTACTATCTAATTACTATTTTCCCCCTCTACTAACCATACTAATATTCTCCTAATAATCCTAATATCTCGTTACTAGGGGCCTTACAGAGATGTTTAGTGATCTAATATTCTATGTTCTTGGTATGCAGGAAGCTGGAAGCATGTCTGATTATCACGAGAAATTTCCTATTGGAACAAAAGTTCAAGCTGTTTGGAGTGAGGATGGGGAGTGGTGAGTAAAAAAAAGGAGAAAATTTACCATCTTACTTAAACAGTATCTGTCCGTAGGTTGTACAAGGGTTCTAACAAAAGGAAGTTTATTCTCCAACTTATTCTCTTTTTAGTTAGAAAAGAGACGTTGAAGATGTGTGCTTAAAGTTGACACAAGTGCGAAAATAATAAGTGTCTGCATGGAGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAATTTTAAAAAAATTTAATTAATTAATTAATTTTTTTTTAAGATTTTGACTCTATCCAATTTAAGAAGCTGCGCCATTTCCATAAAGTTAGTTTTGCCAAATGGATGTTAATGAAGATCAGGTTATTGTTCTACTATAACAGCAGCTTGGCTGTCTCAAAATTGGCCGAACTTTGTAAATACATATCTTTAATTTATCTTAAAGAGAAACCTTAGCGTTTTCCTAGAAAGGAAGAGGATGAAAAACCATGTTAAATTAAGAGTTCGTTCAATCCAATTTAATACTGCCACGACTATAACAGCTATTCCCTTTGTGAATATTATGAACCTAAACTCATCTTCATCTCCCTCCTCCAGTTCTCAGTTCATCCTGCCTGTTCAGTGAGGAGGGTTGGTCCCTAGTGAGGTTTAATGTGTCTCTTTGACCTTCAAATGCTAAAGAGTTGCGTTACTTTTTGCTAAGTCTTACTTTTTAGATTAGAGCCTTTTTCTGCGTAGCTAGTTCTTGAGGTTCCTTTTCTCAGGCTATTTTTTGTATGCCCCCTCTTGTTCTTTAATGTTTCTTAATGTAACCATTTTTGTTGTAAAAAAGATTTTCTGTTCAGCTATCTTGTTTTGAGCATTTGAAGTAACATCTTCACTTGGTCTATGGGAATAAATCTTAGTCCTTTGAAGCTGACTATAGTTTCTAGGCTTCCAAGCATCTACACCAATTTTTTTGATGTACGCATTTTTACTTCTCTCAGCTCCAATGTTTTCTGCCACCTCTTTTGAAGCCTTTTTATTTCTCCCTTTTTGTTTAACTACATTTCCTTCAACTATTTTTTTAATAGAAACAAAACTTTTCCCTTGATTGTGTTCAATTGTTTGAATATTCAGGTACGATGCTACAATTGAAGCTCACACTGTAAATGGTTTCTATGTTAGTTACGACGGTTGGGGAAACAAAGAAGAGGTAAGGTTTCTACACCTGCTGTTTGCATGACTTTTGATTATTCTTAAGAGCGTTATCTTTTATCAGAAAAAAATGAGTATTATAGTGTTTCTTCAAAACGATCTGGGTCTGACTCTCTAAATTAACTAGAAATGTGAGGAACGGATTCATGGTGAGTATGTATGTGATAAATTTCCCTTTGGATGGGTACAATCCGTAGGCGTTAGAACTAAAAGCATATGTAAGACTTCTTGGAAGGCCATCTTGGTTGGTTTTAGTTGCTTTGTTTGTTGGATTAGCTGGTATAAATACCATGGTCTCTCATTGCAAGACTTGATTGAACAATTATATAATTCTTGCATTTTGCTTTACTCTAGTTTGCCTAGATAACTCGAAGGTATGTTGAATTCATTCTCTCAGACCCTCTCCTATTTATGTTGCCCTAATAATTACTAGGCCAATAACTAATAAGGTATTGTTTCTTTTTGAAAAGAAAAAATGCGTACATTATTGATTGATACATGGGAGAAACAACTGCAAAATACAAGAAGAGTTAGCACGTGGGAGAGTGCAATGAAGTTTAGGAGTTCAAATCATAATATATATATTTTTTTGAAGTTTAGGAGTTCTATATATAACTACACAAACACATGTATGAACTCACATACATATACACATACCTGTTAAATGTAATTATGGACCTTTTAACTAAAATTGGTAGTCAGTAGTGCACCAATTGTCCACACTTATGGTATCTGCTAATTTTAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAGTGGCTGAAGCTACAAAGCAGGCTATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTTCAATCCCGAAATTTACCATCAAAGCTTCGAATTGAACCTGATGATCCTGAGGACGTAGTAAGTAGTTGATAATTGTAATATTTCGTGGCAACTAATTTATTAATCCAGTAATTAGTTTGTTATTTAAGAAAAATGTAGTAATGCATTTGTTTTGTACCTGTGATGCTAGAAATTCAGATATATATATATATATATATTATCAAGAACTTACCTGATGTTAATTTGTTTTGTATAGAAAGCCACCAAACGGAAGAAAATACATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACCCAAAATAAACGGCAGAATGCTTGGCAGCAGTTTCAATCAGCAAAAGGGAAATCTAAAAAGGTAAATGTTGTGAAATCTAGCATTTTGGTGTGTTTTATATTGAGGCCCAACAGGTATAAAAACCCCAAAGGCAAAAGCATGTTTTTGAAAAGTATTTCAATTGACATTAATCAAAACAGAATAATAATAGCTAGAAGATTTTTCTTCCCAACAAGACATCCAAGAAATCACAAGATGAACACCCTTGTGTGTACATTTACTTCAGGGAAAATCAACAACTCATTACAAGCTCTAGAAATAAAGCACCAGCACTTCACAGCACATTCTAGAGGGCTGAGTATCCTCTCTCACGAGCCAAACGCTCACCAAAATCTCCAACATCACTCACCTAGTATCTATAACCCAAAAGATGTAGCGAACTTAACGTCTAATTAATATTTTCCCAACTGGGAGTCTTTTAGTCTGATGATGATTTATACATACAAATTTGCAGATTGGTTTCTTCTCTGGACGGAAGAGGGAGAGCATTTTCAAGTCTCCGGATGATCCAAATGGGAAGGTTGGTGTGACAGGAAGTGGAAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACGGTGGAGATGGATGAGTAAAAGTGAGATTAGAGTTTGTAGGCTGGTGGTTTCTTTGTATGTATCTTCAGTTAGTATCCACAATCCATTTGATGCAATCTCTGTGGTTAGATTCATATAAATGTGCTGAAAGTTTAGGCGGGGGGGGATTCCCTCCAAGTAACATAGTGTTTTCTTATGAGAATGGTTACAAAGGCTAGCCATGACAGGGTCTCTATTTTCCTTTGACATTTTTATGTTTACTTGTTCTATTTCCTTATAGTTAATGGGGTATGCACATTTACATGGAAAACCCAATCAATTATGTTTAAATTTCCACTCCCTCTCCCACATTTCTTTAGAGATGATCCTAGGTTGTTTGAGGGAGCTTACTTCATAATATAGCATTTACTATGTTGAGGGGAGAATTTTACTTCCTCACCTATAAATAAAATTATTGATGTTGTATAATCGGGTATGACCAAATACCTTACCTGAACAAGACCTATTCTATAGATTCATTCATGTTCTTGATTTCTGATAAACCAGG

mRNA sequence

CGGATTTCATAGCCCAAACACTGAGCCTAAAAGGGCTGTGTTCTTAATCTGGACGGGGGAGTTTAGCGTTCGTGTGTGTGTATTTCATCATCCTCTCATTCTCTTTCTAAAATTTTTTCCAATTTTACGCTGTTTTTCTCTCTTCTCCTCCTCCTCCTCCTCTGTTCATCTAATTCTACCAAAATAATGCAAGGAGGAGAAGATGTTAGCATTGAAGAGTTGGCTAATAATCTGTCTACCTACAAAGACCAGCTTCACCAGGTCAGACAGCTGTTAGATGATGATCCTGGCAACTCTGAATACATTGATATGGAAAAGGAGCTTGAAGAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTAGAAACTGGTGATGACAGTGCATCAACTGGTTTCCAGCAGCCTAAAGAAAATGAAATGGAAGCTGGAAGCATGTCTGATTATCACGAGAAATTTCCTATTGGAACAAAAGTTCAAGCTGTTTGGAGTGAGGATGGGGAGTGGTACGATGCTACAATTGAAGCTCACACTGTAAATGGTTTCTATGTTAGTTACGACGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAGTGGCTGAAGCTACAAAGCAGGCTATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTTCAATCCCGAAATTTACCATCAAAGCTTCGAATTGAACCTGATGATCCTGAGGACGTAAAAGCCACCAAACGGAAGAAAATACATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACCCAAAATAAACGGCAGAATGCTTGGCAGCAGTTTCAATCAGCAAAAGGGAAATCTAAAAAGATTGGTTTCTTCTCTGGACGGAAGAGGGAGAGCATTTTCAAGTCTCCGGATGATCCAAATGGGAAGGTTGGTGTGACAGGAAGTGGAAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACGGTGGAGATGGATGAGTAAAAGTGAGATTAGAGTTTGTAGGCTGGTGGTTTCTTTGTATGTATCTTCAGTTAGTATCCACAATCCATTTGATGCAATCTCTGTGGTTAGATTCATATAAATGTGCTGAAAGTTTAGGCGGGGGGGGATTCCCTCCAAGTAACATAGTGTTTTCTTATGAGAATGGTTACAAAGGCTAGCCATGACAGGGTCTCTATTTTCCTTTGACATTTTTATGTTTACTTGTTCTATTTCCTTATAGTTAATGGGGTATGCACATTTACATGGAAAACCCAATCAATTATGTTTAAATTTCCACTCCCTCTCCCACATTTCTTTAGAGATGATCCTAGGTTGTTTGAGGGAGCTTACTTCATAATATAGCATTTACTATGTTGAGGGGAGAATTTTACTTCCTCACCTATAAATAAAATTATTGATGTTGTATAATCGGGTATGACCAAATACCTTACCTGAACAAGACCTATTCTATAGATTCATTCATGTTCTTGATTTCTGATAAACCAGG

Coding sequence (CDS)

ATGCAAGGAGGAGAAGATGTTAGCATTGAAGAGTTGGCTAATAATCTGTCTACCTACAAAGACCAGCTTCACCAGGTCAGACAGCTGTTAGATGATGATCCTGGCAACTCTGAATACATTGATATGGAAAAGGAGCTTGAAGAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTAGAAACTGGTGATGACAGTGCATCAACTGGTTTCCAGCAGCCTAAAGAAAATGAAATGGAAGCTGGAAGCATGTCTGATTATCACGAGAAATTTCCTATTGGAACAAAAGTTCAAGCTGTTTGGAGTGAGGATGGGGAGTGGTACGATGCTACAATTGAAGCTCACACTGTAAATGGTTTCTATGTTAGTTACGACGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAGTGGCTGAAGCTACAAAGCAGGCTATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTTCAATCCCGAAATTTACCATCAAAGCTTCGAATTGAACCTGATGATCCTGAGGACGTAAAAGCCACCAAACGGAAGAAAATACATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACCCAAAATAAACGGCAGAATGCTTGGCAGCAGTTTCAATCAGCAAAAGGGAAATCTAAAAAGATTGGTTTCTTCTCTGGACGGAAGAGGGAGAGCATTTTCAAGTCTCCGGATGATCCAAATGGGAAGGTTGGTGTGACAGGAAGTGGAAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACGGTGGAGATGGATGAGTAA

Protein sequence

MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE

Homology

[Close]

BLAST of PI0023626 vs. ExPASy Swiss-Prot
Match: Q6DEY1 (Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=8364 GN=smndc1 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.1e-18
Identity = 90/285 (31.58%), Postives = 136/285 (47.72%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L+ YK QL QV   L  +  N + + ++K+L+EVI LT++LLS+          
Sbjct: 3   EDLAKQLAGYKAQLQQVESALTANGENEDLLKLKKDLQEVIELTKDLLSSQPS------- 62

Query: 70  VETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
            ET DD+         ++   +GS S     + +G K  AVWS+DG+WY+A I E    N
Sbjct: 63  -ETADDAC--------DDMSASGSQS-----WKVGEKCMAVWSDDGQWYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N+R ++       E  +  E                   S 
Sbjct: 123 GTAAITFAGYGNAEVTSLLNLRPVE-------EGRKAKE------------------DSG 182

Query: 190 NLPSKLRIEPDDPEDVKATKR-KKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSK 249
           NLP   +      E + A +  KK  A K   RI++LE  +  ++  WQQF + A  K+K
Sbjct: 183 NLPMSKK------EMIAAQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNKAYSKNK 230

Query: 250 KIGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
           K     G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 K-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of PI0023626 vs. ExPASy Swiss-Prot
Match: Q3T045 (Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.9e-17
Identity = 90/284 (31.69%), Postives = 135/284 (47.54%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QL QV   L  +  N + + ++K+L+EVI LT++LLST     ++ S 
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS- 62

Query: 70  VETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
               D+ AST   QP  +             + +G K  A+WSEDG+ Y+A I E    N
Sbjct: 63  ----DNFAST---QPTHS-------------WKVGDKCMAIWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN              EV  LL  + V E  K          A  D  ++
Sbjct: 123 GTAAITFAGYGN-------------AEVTPLLNLKPVEEGRK----------AKEDSGNK 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
            +  K  I        +  + KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 PMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of PI0023626 vs. ExPASy Swiss-Prot
Match: O75940 (Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=SMNDC1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.9e-17
Identity = 91/284 (32.04%), Postives = 134/284 (47.18%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QL QV   L  +  N + + ++K+L+EVI LT++LLST     ++ S 
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS- 62

Query: 70  VETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
               D  AST   QP  +             + +G K  AVWSEDG+ Y+A I E    N
Sbjct: 63  ----DSFAST---QPTHS-------------WKVGDKCMAVWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN              EV  LL  + V E  K          A  D  ++
Sbjct: 123 GTAAITFAGYGN-------------AEVTPLLNLKPVEEGRK----------AKEDSGNK 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
            +  K  I        +  + KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 PMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of PI0023626 vs. ExPASy Swiss-Prot
Match: Q5R591 (Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.7e-17
Identity = 90/284 (31.69%), Postives = 134/284 (47.18%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QL QV   L  +  N + + ++K+L+EVI LT++LLST     ++ S 
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS- 62

Query: 70  VETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
               D  AST   QP  +             + +G K  A+WSEDG+ Y+A I E    N
Sbjct: 63  ----DSFAST---QPTHS-------------WKVGDKCMAIWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN              EV  LL  + V E  K          A  D  ++
Sbjct: 123 GTAAITFAGYGN-------------AEVTPLLNLKPVEEGRK----------AKEDSGNK 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
            +  K  I        +  + KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 PMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of PI0023626 vs. ExPASy Swiss-Prot
Match: Q8BGT7 (Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=Smndc1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.5e-16
Identity = 90/284 (31.69%), Postives = 133/284 (46.83%), Query Frame = 0


Query: 10  EELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QL QV   L  +  N + + ++K+L+EVI LT++LLST     ++ S 
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS- 62

Query: 70  VETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
               D  AST   QP  +             + +G K  AVWSEDG+ Y+A I E    N
Sbjct: 63  ----DSFAST---QPTHS-------------WKVGDKCMAVWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAASVDFQSR 189
           G   +++  +GN              EV  LL  + V E  K          A  D  ++
Sbjct: 123 GTAAITFAVYGN-------------AEVTPLLNLKPVEEGRK----------AKEDSGNK 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
            +  K  I        +  + KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 PMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of PI0023626 vs. ExPASy TrEMBL
Match: A0A6J1K7R2 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 GN=LOC111493029 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153
Identity = 284/299 (94.98%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA NLSTYKDQL QVR+LLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGDDSAS  FQQ K N+MEA SMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMD+
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of PI0023626 vs. ExPASy TrEMBL
Match: A0A6J1EY48 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=3662 GN=LOC111439780 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153
Identity = 284/299 (94.98%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA NLSTYKDQL QVR+LLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGDDSAS  FQQ K N+MEA SMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMD+
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of PI0023626 vs. ExPASy TrEMBL
Match: A0A6J1DPE2 (survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=3673 GN=LOC111022290 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 6.7e-149
Identity = 277/299 (92.64%), Postives = 287/299 (95.99%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELA+NLSTYKDQL QVRQLLDDDP NSEYIDMEKELEEVI+LTEELL+TA
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA 60

Query: 61  KQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGD+SAS  F Q KE +MEA S+SD+HEKFPIG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYD WGNKEEVDPANVR IQ EVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLP KLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMD+
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 299

[Close]

BLAST of PI0023626 vs. ExPASy TrEMBL
Match: A0A1S3CE07 (survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.1e-135
Identity = 253/257 (98.44%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 43  EKELEEVIALTEELLSTAKQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFP 102
           +KELEEVIALTEELLSTAKQNE+SGSNVETGDDSAS GFQQPKENEMEAGSMSDYHEKFP
Sbjct: 13  KKELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFP 72

Query: 103 IGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 162
           IGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE
Sbjct: 73  IGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 132

Query: 163 RVAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 222
           R+AEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ
Sbjct: 133 RMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 192

Query: 223 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 282
           LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ
Sbjct: 193 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 252

Query: 283 KREKHLHLKGATVEMDE 300
           KREKHLHLKGATVEMDE
Sbjct: 253 KREKHLHLKGATVEMDE 269

[Close]

BLAST of PI0023626 vs. ExPASy TrEMBL
Match: A0A1S3CD96 (survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.3e-133
Identity = 248/252 (98.41%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 48  EVIALTEELLSTAKQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKV 107
           +VIALTEELLSTAKQNE+SGSNVETGDDSAS GFQQPKENEMEAGSMSDYHEKFPIGTKV
Sbjct: 23  QVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKV 82

Query: 108 QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEA 167
           QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER+AEA
Sbjct: 83  QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA 142

Query: 168 TKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 227
           TKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ
Sbjct: 143 TKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 202

Query: 228 NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 287
           NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH
Sbjct: 203 NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 262

Query: 288 LHLKGATVEMDE 300
           LHLKGATVEMDE
Sbjct: 263 LHLKGATVEMDE 274

[Close]

BLAST of PI0023626 vs. NCBI nr
Match: XP_004142808.1 (survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus] >KGN51867.2 hypothetical protein Csa_008126 [Cucumis sativus])

HSP 1 Score: 572.4 bits (1474), Expect = 2.3e-159
Identity = 294/299 (98.33%), Postives = 296/299 (99.00%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNE+SGSNVETGDDSAS GFQQ KENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEVSGSNVETGDDSASIGFQQSKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN LLEAERVAEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNPLLEAERVAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQ+A
Sbjct: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQTA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 299

[Close]

BLAST of PI0023626 vs. NCBI nr
Match: XP_038876515.1 (survival of motor neuron-related-splicing factor 30 [Benincasa hispida])

HSP 1 Score: 566.2 bits (1458), Expect = 1.6e-157
Identity = 292/299 (97.66%), Postives = 293/299 (97.99%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELANNLSTYKDQL QVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEI GSNVETGDDSAS  F QPKENEMEAGSMSDYHEKFPIG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEIPGSNVETGDDSASISFHQPKENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVR IQLEVNALLEAERVAEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRAIQLEVNALLEAERVAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 299

[Close]

BLAST of PI0023626 vs. NCBI nr
Match: XP_022933076.1 (survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022998367.1 survival of motor neuron-related-splicing factor 30 [Cucurbita maxima] >XP_023530530.1 survival of motor neuron-related-splicing factor 30 [Cucurbita pepo subsp. pepo] >KAG6601669.1 Survival of motor neuron-related-splicing factor 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 552.4 bits (1422), Expect = 2.5e-153
Identity = 284/299 (94.98%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA NLSTYKDQL QVR+LLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGDDSAS  FQQ K N+MEA SMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMD+
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of PI0023626 vs. NCBI nr
Match: KAG7032438.1 (Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148
Identity = 283/323 (87.62%), Postives = 291/323 (90.09%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEE------------ 60
           MQGGEDVS+EELA NLSTYKDQL QVR+LLDDDPGNSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVVYFCPPRYILT 60

Query: 61  ------------VIALTEELLSTAKQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSD 120
                       VIALTEELLSTAKQNEISGSNVETGDDSAS  FQQ K N+MEA SM D
Sbjct: 61  ATWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMCD 120

Query: 121 YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN 180
           YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN
Sbjct: 121 YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN 180

Query: 181 ALLEAERVAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKS 240
           ALLEAER+AEATKQAIKRKIAQAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKS
Sbjct: 181 ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKS 240

Query: 241 KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGK 300
           KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGK
Sbjct: 241 KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGK 300

[Close]

BLAST of PI0023626 vs. NCBI nr
Match: XP_022155149.1 (survival of motor neuron-related-splicing factor 30 [Momordica charantia])

HSP 1 Score: 536.6 bits (1381), Expect = 1.4e-148
Identity = 277/299 (92.64%), Postives = 287/299 (95.99%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELA+NLSTYKDQL QVRQLLDDDP NSEYIDMEKELEEVI+LTEELL+TA
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA 60

Query: 61  KQNEISGSNVETGDDSASTGFQQPKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGD+SAS  F Q KE +MEA S+SD+HEKFPIG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYD WGNKEEVDPANVR IQ EVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLP KLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMD+
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 299

[Close]

BLAST of PI0023626 vs. TAIR 10
Match: AT2G02570.1 (nucleic acid binding;RNA binding )

HSP 1 Score: 379.8 bits (974), Expect = 2.0e-105
Identity = 203/297 (68.35%), Postives = 245/297 (82.49%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++SIE+LA+++STYK+QL QVRQLL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEISGSNVETGDDSASTGFQQPKENEME-AGSMSD-YHE-KFPIGTKVQAVWSEDGEWYD 122
           NEIS S  + G  + +T      E   E  G  +D  HE KFP+GTKVQAV+S+DGEWYD
Sbjct: 64  NEISLS--DAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYD 123

Query: 123 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQA 182
           ATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KRKI +A
Sbjct: 124 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKA 183

Query: 183 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 242
           AS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+
Sbjct: 184 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQT 243

Query: 243 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVE 297
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E
Sbjct: 244 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAE 296

[Close]

BLAST of PI0023626 vs. TAIR 10
Match: AT2G02570.2 (nucleic acid binding;RNA binding )

HSP 1 Score: 379.8 bits (974), Expect = 2.0e-105
Identity = 203/297 (68.35%), Postives = 245/297 (82.49%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++SIE+LA+++STYK+QL QVRQLL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEISGSNVETGDDSASTGFQQPKENEME-AGSMSD-YHE-KFPIGTKVQAVWSEDGEWYD 122
           NEIS S  + G  + +T      E   E  G  +D  HE KFP+GTKVQAV+S+DGEWYD
Sbjct: 64  NEISLS--DAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYD 123

Query: 123 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQA 182
           ATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KRKI +A
Sbjct: 124 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKA 183

Query: 183 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 242
           AS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+
Sbjct: 184 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQT 243

Query: 243 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVE 297
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E
Sbjct: 244 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAE 296

[Close]

BLAST of PI0023626 vs. TAIR 10
Match: AT2G02570.4 (nucleic acid binding;RNA binding )

HSP 1 Score: 379.8 bits (974), Expect = 2.0e-105
Identity = 203/297 (68.35%), Postives = 245/297 (82.49%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++SIE+LA+++STYK+QL QVRQLL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEISGSNVETGDDSASTGFQQPKENEME-AGSMSD-YHE-KFPIGTKVQAVWSEDGEWYD 122
           NEIS S  + G  + +T      E   E  G  +D  HE KFP+GTKVQAV+S+DGEWYD
Sbjct: 64  NEISLS--DAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYD 123

Query: 123 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQA 182
           ATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KRKI +A
Sbjct: 124 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKA 183

Query: 183 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 242
           AS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+
Sbjct: 184 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQT 243

Query: 243 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVE 297
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E
Sbjct: 244 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAE 296

[Close]

BLAST of PI0023626 vs. TAIR 10
Match: AT2G02570.3 (nucleic acid binding;RNA binding )

HSP 1 Score: 354.0 bits (907), Expect = 1.2e-97
Identity = 193/297 (64.98%), Postives = 235/297 (79.12%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++SIE+LA+++STYK+QL QVRQLL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEISGSNVETGDDSASTGFQQPKENEME-AGSMSD-YHE-KFPIGTKVQAVWSEDGEWYD 122
           NEIS S  + G  + +T      E   E  G  +D  HE KFP+GTKVQAV+S+DGEWYD
Sbjct: 64  NEISLS--DAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDGEWYD 123

Query: 123 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERVAEATKQAIKRKIAQA 182
           ATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KRKI +A
Sbjct: 124 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKA 183

Query: 183 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 242
           AS D+Q++ LP+KL+I+P+DPEDVK  KRKKIH            V QNK+QN WQQFQ+
Sbjct: 184 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIH------------VVQNKKQNDWQQFQT 243

Query: 243 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVE 297
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E
Sbjct: 244 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAE 284

The following BLAST results are available for this feature:

BLAST of PI0023626 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DEY1	4.1e-18	31.58	Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=836...	[more]
Q3T045	5.9e-17	31.69	Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMN...	[more]
O75940	5.9e-17	32.04	Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=S...	[more]
Q5R591	7.7e-17	31.69	Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=S...	[more]
Q8BGT7	6.5e-16	31.69	Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=...	[more]

BLAST of PI0023626 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7R2	1.2e-153	94.98	survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EY48	1.2e-153	94.98	survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=366...	[more]
A0A6J1DPE2	6.7e-149	92.64	survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=36...	[more]
A0A1S3CE07	1.1e-135	98.44	survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo O...	[more]
A0A1S3CD96	2.3e-133	98.41	survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo O...	[more]

BLAST of PI0023626 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142808.1	2.3e-159	98.33	survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus]...	[more]
XP_038876515.1	1.6e-157	97.66	survival of motor neuron-related-splicing factor 30 [Benincasa hispida]	[more]
XP_022933076.1	2.5e-153	94.98	survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022...	[more]
KAG7032438.1	1.1e-148	87.62	Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subs...	[more]
XP_022155149.1	1.4e-148	92.64	survival of motor neuron-related-splicing factor 30 [Momordica charantia]	[more]

BLAST of PI0023626 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02570.1	2.0e-105	68.35	nucleic acid binding;RNA binding	[more]
AT2G02570.2	2.0e-105	68.35	nucleic acid binding;RNA binding	[more]
AT2G02570.4	2.0e-105	68.35	nucleic acid binding;RNA binding	[more]
AT2G02570.3	1.2e-97	64.98	nucleic acid binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	COILS	Coil	Coil	coord: 43..63
None	No IPR available	GENE3D	2.30.30.140		coord: 96..152 e-value: 5.8E-11 score: 44.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..82
None	No IPR available	PANTHER	PTHR13681	SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED	coord: 1..292
None	No IPR available	PANTHER	PTHR13681:SF32	BNAA06G34090D PROTEIN	coord: 1..292
None	No IPR available	SUPERFAMILY	63748	Tudor/PWWP/MBT	coord: 100..151
IPR002999	Tudor domain	SMART	SM00333	TUDOR_7	coord: 99..156 e-value: 1.7E-11 score: 54.2
IPR002999	Tudor domain	PROSITE	PS50304	TUDOR	coord: 100..158 score: 13.444279
IPR002999	Tudor domain	CDD	cd04508	TUDOR	coord: 104..149 e-value: 9.30718E-11 score: 54.1411
IPR010304	Survival motor neuron	PFAM	PF06003	SMN	coord: 67..156 e-value: 1.3E-6 score: 27.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023626.1	PI0023626.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding