PI0023250 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTCAAGGGATTGGAGAAGTGAAAATAAGCGTTTGTTTGTTGTTAGCACTCCTGGCGGCGTCAGCGTCGACGTTGAAGGCGCGGAGCAGTTGCACCGCCGTAGTGTGCTCTTGCTATGCACCTAATTCTATAAGATTTAACAACAAAGGAGGGGAAAGAAGCAAGGCCACCACCATTTTCAGATCACAAAACAGAGATGAACTACAACAATATGGTAGTAGTGGCAATGGGTCTAATGGGATTTCTTTAGAATTCCCAAATCTCAAGAGCAATTTAAAGAAGAAGACAAAGGAGGATCAGGAGAATTGCTCCATTGAAACAAGGAAAGTGAACTGGCCTGATGCCCATGGGAAAGATATTGCTCATATTCAAGAGTTTGAACCTAGGTATGCTAATTGCATTATAATCTAATAATCATTTGAGATTTTTGATACAACTTATGATTTAACATGATATTAAAGCAAAGCAGAAAGTTTGTGTTCATAATGTAATTTTAGAATTTCTAATTCTGAGGTGGTAAGTTGTGTAACAGTGTGTCAGGAGATGGGGAGCTCGAGGGGGTAAGAAATTCTTGTGTTTGCACAATTCAGTAA ATGGTTTCAAGGGATTGGAGAAGTGAAAATAAGCGTTTGTTTGTTGTTAGCACTCCTGGCGGCGTCAGCGTCGACGTTGAAGGCGCGGAGCAGTTGCACCGCCGTAGAGGGGAAAGAAGCAAGGCCACCACCATTTTCAGATCACAAAACAGAGATGAACTACAACAATATGGTAGTAGTGGCAATGGGTCTAATGGGATTTCTTTAGAATTCCCAAATCTCAAGAGCAATTTAAAGAAGAAGACAAAGGAGGATCAGGAGAATTGCTCCATTGAAACAAGGAAAGTGAACTGGCCTGATGCCCATGGGAAAGATATTGCTCATATTCAAGAGTTTGAACCTAGTGTGTCAGGAGATGGGGAGCTCGAGGGGGTAAGAAATTCTTGTGTTTGCACAATTCAGTAA ATGGTTTCAAGGGATTGGAGAAGTGAAAATAAGCGTTTGTTTGTTGTTAGCACTCCTGGCGGCGTCAGCGTCGACGTTGAAGGCGCGGAGCAGTTGCACCGCCGTAGAGGGGAAAGAAGCAAGGCCACCACCATTTTCAGATCACAAAACAGAGATGAACTACAACAATATGGTAGTAGTGGCAATGGGTCTAATGGGATTTCTTTAGAATTCCCAAATCTCAAGAGCAATTTAAAGAAGAAGACAAAGGAGGATCAGGAGAATTGCTCCATTGAAACAAGGAAAGTGAACTGGCCTGATGCCCATGGGAAAGATATTGCTCATATTCAAGAGTTTGAACCTAGTGTGTCAGGAGATGGGGAGCTCGAGGGGGTAAGAAATTCTTGTGTTTGCACAATTCAGTAA MVSRDWRSENKRLFVVSTPGGVSVDVEGAEQLHRRRGERSKATTIFRSQNRDELQQYGSSGNGSNGISLEFPNLKSNLKKKTKEDQENCSIETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ Homology
BLAST of PI0023250 vs. ExPASy TrEMBL
Match: A0A5N6REA8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014890 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.6e-23 Identity = 71/139 (51.08%), Postives = 83/139 (59.71%), Query Frame = 0
BLAST of PI0023250 vs. ExPASy TrEMBL
Match: A0A6P6GC85 (uncharacterized protein LOC112492388 OS=Ziziphus jujuba OX=326968 GN=LOC112492388 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 9.1e-21 Identity = 53/76 (69.74%), Postives = 58/76 (76.32%), Query Frame = 0
BLAST of PI0023250 vs. ExPASy TrEMBL
Match: A0A7N2LXE2 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.9e-20 Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of PI0023250 vs. ExPASy TrEMBL
Match: A0A2I4F605 (uncharacterized protein LOC108995885 OS=Juglans regia OX=51240 GN=LOC108995885 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 2.2e-19 Identity = 51/72 (70.83%), Postives = 56/72 (77.78%), Query Frame = 0
BLAST of PI0023250 vs. ExPASy TrEMBL
Match: A0A5D2D9X9 (Uncharacterized protein (Fragment) OS=Gossypium darwinii OX=34276 GN=ES288_D02G038900v1 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.9e-19 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of PI0023250 vs. NCBI nr
Match: KAG6593791.1 (hypothetical protein SDJN03_13267, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146.0 bits (367), Expect = 2.4e-31 Identity = 78/114 (68.42%), Postives = 87/114 (76.32%), Query Frame = 0
BLAST of PI0023250 vs. NCBI nr
Match: KAG7026120.1 (hypothetical protein SDJN02_12619 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 146.0 bits (367), Expect = 2.4e-31 Identity = 78/114 (68.42%), Postives = 87/114 (76.32%), Query Frame = 0
BLAST of PI0023250 vs. NCBI nr
Match: KAE8076227.1 (hypothetical protein FH972_014890 [Carpinus fangiana]) HSP 1 Score: 118.2 bits (295), Expect = 5.3e-23 Identity = 71/139 (51.08%), Postives = 83/139 (59.71%), Query Frame = 0
BLAST of PI0023250 vs. NCBI nr
Match: KAG2721147.1 (hypothetical protein I3760_02G067800 [Carya illinoinensis]) HSP 1 Score: 110.9 bits (276), Expect = 8.5e-21 Identity = 56/86 (65.12%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of PI0023250 vs. NCBI nr
Match: KAG6664083.1 (hypothetical protein CIPAW_02G067700 [Carya illinoinensis] >KAG6726145.1 hypothetical protein I3842_02G066500 [Carya illinoinensis] >KAG7991029.1 hypothetical protein I3843_02G055000 [Carya illinoinensis]) HSP 1 Score: 110.9 bits (276), Expect = 8.5e-21 Identity = 56/86 (65.12%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of PI0023250 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 6.3e-06 Identity = 26/60 (43.33%), Postives = 35/60 (58.33%), Query Frame = 0
BLAST of PI0023250 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 8.2e-06 Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 0
BLAST of PI0023250 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 6.9e-05 Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
BLAST of PI0023250 vs. TAIR 10
Match: AT1G22790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 5.9e-04 Identity = 36/129 (27.91%), Postives = 64/129 (49.61%), Query Frame = 0
BLAST of PI0023250 vs. TAIR 10
Match: AT1G22790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 5.9e-04 Identity = 36/129 (27.91%), Postives = 64/129 (49.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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